Rh7AG092900
MYB Family

Trihelix transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0006309
Physical Location & Seq
Reverse (-)
7082895 .. 7088084
5190 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG092900.1

Sequence Viewer

Length: 1956 bp
ATGCAAGGCGGGCAGTCCCATTACGGAGCTTCAGCTCCAGCTCCAGCTCCAGCTGCCGAAGGGGCCGCTGCTACTACTTCCATGGCGGCGGAGGCAGCAGCAGCAGACCAAACGCATGTAGTTGAAGAGGCTTCCCCCATCAGCAGCAGGCCGCCGGCGGGAGGAGCAATCTCCGCCGTCAATTTGGACGAGCTCATGACGCTCTCCGGTGCAGCAGCTGACGTGGCGGCAGATCAAGGCGGTGGCGGCGGTGGAGGTTCCGGCGGCGGGAACAGATGGCCGCGTCAGGAGACGCTGGCGCTTCTTAAGATTCGGTCCGAGATGGATGTGGCCTTCCGCGACGCCACTCTCAAAGGTCCCTTATGGGAAGATGTTTCCAGGAAGCTAGCGGAGCTGGGTTACAAGCGAAATGCGAAGAAGTGCAAAGAGAAATTCGAAAACGTTCACAAGTATTATAAGAGGACCAAAGAAGGCCGGGCCGGGCGGCAAGACGGCAAGAGTTACAAGTTTTTCAGTGAGCTGGAGGCGCTCCACGGCACCACCGCCAACGTGTCGGCTTCTCCGCCGGTCCACGTCGCCAACACTCCGGTTTCTATCGGTTTCGGATCCATCAGCAGCCCGATGCCCATTTCGTCCTTCCGGATGACTAGTGGCAGTGGCACCACTTCTACTATTCCGGGTATGACCTCGCAGGGTGGGGGTGGGGGTGCAATTCCAGGAATGCCCTCGTCCCAACCACCACCGCCCCCGGCCCCTCCCATGGACATGAATTTCTCTTCCAACAGCTCCTCCTCCTCGTCGCACGATGAGTACGAGGACGACGATGAGGTGGCGGGAGAGCCGTCGACGAACACGAGCCGGAAGCGGAAGAGAGGTTTAGGGACGAGAGAGGGCGGCGGAAGCACGAGAAGGATGATGGAGTTTTTCGAGATTCTGATGAAGCAGGTGATGCAGAAGCAGGAGACGATGCAGCAGAGGTTTCTGGAGGTGATTGAGAAGAGGGAGCAAGATCGGAACATAAGGGAAGACGCGTGGAAGAGGCAAGAGATGGCCAGGCTGACTAGAGAGCACGAGCTCATGACTCAAGAGCGAGCCATTTCGGCTTCCAGAGACGCCGCCATTATCGCTTTTCTGCAGAAAATTACCGGCCAGACTATCCAATTGCCTCCGCCCCTAAACGTCCACAATGCTCCTCCCCCGCCGGTGCCGCCGTCTGTGTCGTCGGTCCATGTCACGCCAGTATCAGCACCACCGCCGCAACCATCAGTTCAACAATTTCATCCGCACGCTACTCCAACTGCTCAAGTTTCACGGCATCAAATTCAAACTTCGATCCCTCCTCATCCTCAGACGGAGGTAGTTATGGCTGTGCCGGAGCAACAGGTGGCACCGCCACAGGAGAATGTAGTCGGTAGTGGAGGAGGTTTTGAGGCAACAACCTCATCTTCGAGGTGGCCCAAGGCGGAAGTTCTTGCACTGATAAAGCTGAGGAGCGGACTGGAGACTAGGTATCAAGAGGCTGGGCCGAAAGGCCCACTTTGGGAGGAGATTTCCGCAGGGATGCAGCGAATGGGGTACAAGAGGAATCCCAAGAGGTGCAAAGAGAAATGGGAGAACATCAACAAGTACTTCAAGAAAGTGAAGGAGAGCAACAAGGCCAGGCCTGAAGATGCGAAAACGTGTCCTTATTTTCACGAACTTGATGCACTCTACCGCAAGAGGGTACTCGGCGGTGGTGGAAGCAGCAGCTCATTGGGTAATCAGAATATCCAACAACAGCCACCGGCTACTCAAGGGACAGTAGCAGCTTCTGTGCCTGCACCACAAACACAAGGAACAGTAGCAGCTACTGATCAATCAGGAAACAAGAATGGCGATCATAGCCCAAATCTGCAAAAGAATCTCTTTGGAGATGCACCTGAAGAGGCAGCCAAGAAGGTACGTTTTTCCACATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000902 GO:0000904 GO:0001101 GO:0001558 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006275 GO:0006351 GO:0006355 GO:0006725 GO:0006807 GO:0006950 GO:0007154 GO:0008150 GO:0008152 GO:0008156 GO:0008361 GO:0009058 GO:0009059 GO:0009414 GO:0009415 GO:0009605 GO:0009628 GO:0009653 GO:0009888 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0009991 GO:0010026 GO:0010035 GO:0010090 GO:0010467 GO:0010468 GO:0010556 GO:0010558 GO:0010564 GO:0010605 GO:0010629 GO:0010948 GO:0016043 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0030154 GO:0030308 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031668 GO:0032502 GO:0032535 GO:0032774 GO:0032875 GO:0032876 GO:0032989 GO:0033554 GO:0034641 GO:0034645 GO:0034654 GO:0040008 GO:0042221 GO:0042631 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0045786 GO:0045892 GO:0045926 GO:0045934 GO:0046483 GO:0048468 GO:0048519 GO:0048523 GO:0048580 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051052 GO:0051053 GO:0051128 GO:0051171 GO:0051172 GO:0051239 GO:0051252 GO:0051253 GO:0051716 GO:0051726 GO:0060255 GO:0065007 GO:0065008 GO:0070887 GO:0071214 GO:0071229 GO:0071462 GO:0071496 GO:0071704 GO:0071840 GO:0080090 GO:0090066 GO:0090304 GO:0090329 GO:0090558 GO:0090626 GO:0097159 GO:0097659 GO:0104004 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1901700 GO:1901701 GO:1902679 GO:1903506 GO:1903507 GO:2000026 GO:2000037 GO:2000038 GO:2000104 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Myb_DNA-bind_4

Protein Analysis

651

Amino Acids

69.8

Weight (kDa)

9.09

Isoelectric Point (pI)

63.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Myb_DNA-bind_4 PF13837 91 - 177 7.4e-24 Myb/SANT-like DNA-binding domain
Myb_DNA-bind_4 PF13837 483 - 570 1.1e-25 Myb/SANT-like DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 456
AarI CACCTGC 1 cut(s) 934
Acc36I ACCTGC 1 cut(s) 934
AccB1I GGYRCC 4 cut(s) 536, 659, 1204, 1387
AccBSI CCGCTC 1 cut(s) 1494
AccI GTMKAC 1 cut(s) 845
AccII CGCG 3 cut(s) 283, 339, 1031
AccIII TCCGGA 1 cut(s) 639
AclI AACGTT 1 cut(s) 441
AclWI GGATC 3 cut(s) 600, 613, 1327
AcoI YGGCCR 3 cut(s) 278, 1050, 1147
AcsI RAATTY 3 cut(s) 431, 769, 1320
AcuI CTGAAG 3 cut(s) 15, 1686, 1941
AcyI GRCGYC 2 cut(s) 342, 1113
AfaI GTAC 5 cut(s) 812, 1577, 1628, 1725, 1941
AfiI CCNNNNNNNGG 6 cut(s) 158, 161, 267, 760, 1540, 1720
AflII CTTAAG 1 cut(s) 305
AflIII ACRYGT 3 cut(s) 549, 1029, 1679
AgsI TTSAA 4 cut(s) 125, 1271, 1325, 1633
AhlI ACTAGT 1 cut(s) 647
AjiI CACGTC 2 cut(s) 223, 574
AjnI CCWGG 4 cut(s) 377, 715, 1052, 1658
Alw21I GWGCWC 3 cut(s) 195, 1071, 1077
Alw26I GTCTC 4 cut(s) 284, 956, 1104, 1496
AlwI GGATC 3 cut(s) 600, 613, 1327
AlwNI CAGNNNCTG 3 cut(s) 218, 1811, 1850
Aor13HI TCCGGA 1 cut(s) 639
ApoI RAATTY 3 cut(s) 431, 769, 1320
Asp700I GAANNNNTTC 1 cut(s) 441
AspLEI GCGC 2 cut(s) 301, 529
AsuC2I CCSGG 4 cut(s) 476, 481, 678, 749
AsuHPI GGTGA 2 cut(s) 958, 1000
AsuII TTCGAA 1 cut(s) 435
AsuNHI GCTAGC 1 cut(s) 385
AvaII GGWCC 5 cut(s) 315, 356, 462, 568, 1225
BaeI ACNNNNGTAYC 2 cut(s) 1224, 1257
BalI TGGCCA 1 cut(s) 1052
BamHI GGATCC 1 cut(s) 605
BanI GGYRCC 4 cut(s) 536, 659, 1204, 1387
BanII GRGCYC 2 cut(s) 195, 1077
BauI CACGAG 3 cut(s) 853, 904, 1070
BbsI GAAGAC 1 cut(s) 1032
Bbv12I GWGCWC 3 cut(s) 195, 1071, 1077
BbvCI CCTCAGC 1 cut(s) 1487
BccI CCATC 7 cut(s) 146, 270, 316, 617, 910, 1042, 1270
BceAI ACGGC 6 cut(s) 161, 508, 550, 826, 1195, 1328
BcgI CGANNNNNNTGC 2 cut(s) 1685, 1719
BciT130I CCWGG 4 cut(s) 379, 717, 1054, 1660
BclI TGATCA 1 cut(s) 1852
BcnI CCSGG 4 cut(s) 476, 481, 678, 749
BcoDI GTCTC 4 cut(s) 284, 956, 1104, 1496
BcuI ACTAGT 1 cut(s) 647
BfaI CTAG 4 cut(s) 386, 648, 1062, 1506
BfmI CTRYAG 1 cut(s) 1133
BfoI RGCGCY 2 cut(s) 302, 530
BfrI CTTAAG 1 cut(s) 305
BfuAI ACCTGC 1 cut(s) 934
BglI GCCNNNNNGGC 2 cut(s) 62, 1100
BmcAI AGTACT 1 cut(s) 1628
Bme1390I CCNGG 8 cut(s) 379, 476, 481, 678, 717, 749, 1054, 1660
Bme18I GGWCC 5 cut(s) 315, 356, 462, 568, 1225
BmgBI CACGTC 2 cut(s) 223, 574
BmiI GGNNCC 9 cut(s) 64, 259, 358, 538, 607, 661, 753, 1206, 1389
BmrFI CCNGG 8 cut(s) 379, 476, 481, 678, 717, 749, 1054, 1660
BmsI GCATC 8 cut(s) 612, 939, 957, 1324, 1551, 1660, 1693, 1903
BmtI GCTAGC 1 cut(s) 389
BpiI GAAGAC 1 cut(s) 1032
BpmI CTGGAG 6 cut(s) 21, 27, 33, 542, 1004, 1520
Bpu10I CCTNAGC 1 cut(s) 1487
Bpu14I TTCGAA 1 cut(s) 435
BpuEI CTTGAG 3 cut(s) 1068, 1287, 1776
BpuMI CCSGG 4 cut(s) 476, 481, 678, 749
BsaHI GRCGYC 2 cut(s) 342, 1113
BsaJI CCNNGG 5 cut(s) 81, 532, 747, 759, 1458
BsaWI WCCGGW 3 cut(s) 206, 586, 639
BsaXI ACNNNNNCTCC 4 cut(s) 773, 803, 1493, 1523
Bsc4I CCNNNNNNNGG 6 cut(s) 158, 161, 267, 760, 1540, 1720
Bse118I RCCGGY 5 cut(s) 154, 565, 1145, 1201, 1783
Bse1I ACTGG 2 cut(s) 1238, 1503
BseAI TCCGGA 1 cut(s) 639
BseBI CCWGG 4 cut(s) 379, 717, 1054, 1660
BseDI CCNNGG 5 cut(s) 81, 532, 747, 759, 1458
BseGI GGATG 6 cut(s) 331, 648, 918, 1279, 1342, 1566
BseLI CCNNNNNNNGG 6 cut(s) 158, 161, 267, 760, 1540, 1720
BseMII CTCAG 2 cut(s) 1361, 1478
BseNI ACTGG 2 cut(s) 1238, 1503
BseRI GAGGAG 9 cut(s) 177, 778, 781, 784, 1182, 1329, 1434, 1504, 1559
BseYI CCCAGC 2 cut(s) 394, 1520
BsgI GTGCAG 2 cut(s) 231, 1803
Bsh1236I CGCG 3 cut(s) 283, 339, 1031
BshNI GGYRCC 4 cut(s) 536, 659, 1204, 1387
BsiHKAI GWGCWC 3 cut(s) 195, 1071, 1077
BslFI GGGAC 4 cut(s) 342, 715, 895, 1810
BslI CCNNNNNNNGG 6 cut(s) 158, 161, 267, 760, 1540, 1720
BsmAI GTCTC 4 cut(s) 284, 956, 1104, 1496
BsmBI CGTCTC 3 cut(s) 284, 956, 1104
BsmFI GGGAC 4 cut(s) 342, 715, 895, 1810
BsmI GAATGC 1 cut(s) 726
Bsp119I TTCGAA 1 cut(s) 435
Bsp1286I GDGCHC 3 cut(s) 195, 1071, 1077
Bsp13I TCCGGA 1 cut(s) 639
Bsp143I GATC 6 cut(s) 232, 605, 1009, 1332, 1852, 1876
Bsp19I CCATGG 2 cut(s) 81, 759
BspCNI CTCAG 2 cut(s) 1360, 1479
BspEI TCCGGA 1 cut(s) 639
BspFNI CGCG 3 cut(s) 283, 339, 1031
BspHI TCATGA 2 cut(s) 195, 1077
BspLI GGNNCC 9 cut(s) 64, 259, 358, 538, 607, 661, 753, 1206, 1389
BspMAI CTGCAG 1 cut(s) 1137
BspMI ACCTGC 1 cut(s) 934
BspOI GCTAGC 1 cut(s) 389
BspPI GGATC 3 cut(s) 600, 613, 1327
BspT104I TTCGAA 1 cut(s) 435
BspT107I GGYRCC 4 cut(s) 536, 659, 1204, 1387
BspTI CTTAAG 1 cut(s) 305
BsrBI CCGCTC 1 cut(s) 1494
BsrFI RCCGGY 5 cut(s) 154, 565, 1145, 1201, 1783
BsrI ACTGG 2 cut(s) 1238, 1503
BssAI RCCGGY 5 cut(s) 154, 565, 1145, 1201, 1783
BssECI CCNNGG 5 cut(s) 81, 532, 747, 759, 1458
BssMI GATC 6 cut(s) 232, 605, 1009, 1332, 1852, 1876
BssNI GRCGYC 2 cut(s) 342, 1113
BssSI CACGAG 3 cut(s) 853, 904, 1070
BssT1I CCWWGG 3 cut(s) 81, 759, 1458
Bst2BI CACGAG 3 cut(s) 853, 904, 1070
Bst2UI CCWGG 4 cut(s) 379, 717, 1054, 1660
Bst4CI ACNGT 2 cut(s) 1801, 1840
Bst6I CTCTTC 6 cut(s) 120, 781, 863, 992, 1031, 1917
BstACI GRCGYC 2 cut(s) 342, 1113
BstAFI CTTAAG 1 cut(s) 305
BstAPI GCANNNNNTGC 1 cut(s) 949
BstBI TTCGAA 1 cut(s) 435
BstC8I GCNNGC 8 cut(s) 11, 149, 156, 297, 387, 1092, 1287, 1818
BstDEI CTNAG 2 cut(s) 1347, 1487
BstDSI CCRYGG 3 cut(s) 81, 532, 759
BstF5I GGATG 6 cut(s) 331, 648, 918, 1279, 1342, 1566
BstFNI CGCG 3 cut(s) 283, 339, 1031
BstH2I RGCGCY 2 cut(s) 302, 530
BstHHI GCGC 2 cut(s) 301, 529
BstKTI GATC 6 cut(s) 235, 608, 1012, 1335, 1855, 1879
BstMAI GTCTC 4 cut(s) 284, 956, 1104, 1496
BstMBI GATC 6 cut(s) 232, 605, 1009, 1332, 1852, 1876
BstNI CCWGG 4 cut(s) 379, 717, 1054, 1660
BstNSI RCATGY 1 cut(s) 119
BstSCI CCNGG 8 cut(s) 377, 474, 479, 676, 715, 747, 1052, 1658
BstSFI CTRYAG 1 cut(s) 1133
BstUI CGCG 3 cut(s) 283, 339, 1031
BstV2I GAAGAC 1 cut(s) 1032
BstX2I RGATCY 1 cut(s) 605
BstYI RGATCY 1 cut(s) 605
BtgI CCRYGG 3 cut(s) 81, 532, 759
BtrI CACGTC 2 cut(s) 223, 574
BtsCI GGATG 6 cut(s) 331, 648, 918, 1279, 1342, 1566
BtsI GCAGTG 1 cut(s) 661
BtsIMutI CAGTG 3 cut(s) 520, 661, 1475
BveI ACCTGC 1 cut(s) 934
Cac8I GCNNGC 8 cut(s) 11, 149, 156, 297, 387, 1092, 1287, 1818
CaiI CAGNNNCTG 3 cut(s) 218, 1811, 1850
CciI TCATGA 2 cut(s) 195, 1077
CfoI GCGC 2 cut(s) 301, 529
Cfr10I RCCGGY 5 cut(s) 154, 565, 1145, 1201, 1783
CpoI CGGWCCG 1 cut(s) 315
CseI GACGC 6 cut(s) 208, 272, 301, 350, 1037, 1121
Csp6I GTAC 5 cut(s) 811, 1576, 1627, 1724, 1940
CspI CGGWCCG 1 cut(s) 315
CviAII CATG 8 cut(s) 82, 116, 196, 760, 766, 1078, 1229, 1953
CviQI GTAC 5 cut(s) 811, 1576, 1627, 1724, 1940
DdeI CTNAG 2 cut(s) 1347, 1487
DpnI GATC 6 cut(s) 234, 607, 1011, 1334, 1854, 1878
DpnII GATC 6 cut(s) 232, 605, 1009, 1332, 1852, 1876
EaeI YGGCCR 3 cut(s) 278, 1050, 1147
Eam1104I CTCTTC 6 cut(s) 120, 781, 863, 992, 1031, 1917
EarI CTCTTC 6 cut(s) 120, 781, 863, 992, 1031, 1917
EciI GGCGGA 6 cut(s) 104, 163, 552, 912, 1158, 1478
Ecl136II GAGCTC 2 cut(s) 193, 1075
Eco130I CCWWGG 3 cut(s) 81, 759, 1458
Eco147I AGGCCT 1 cut(s) 1663
Eco24I GRGCYC 2 cut(s) 195, 1077
Eco47I GGWCC 5 cut(s) 315, 356, 462, 568, 1225
Eco53kI GAGCTC 2 cut(s) 193, 1075
Eco57I CTGAAG 3 cut(s) 15, 1686, 1941
EcoICRI GAGCTC 2 cut(s) 193, 1075
EcoO109I RGGNCCY 1 cut(s) 356
EcoRII CCWGG 4 cut(s) 377, 715, 1052, 1658
EcoT14I CCWWGG 3 cut(s) 81, 759, 1458
EcoT38I GRGCYC 2 cut(s) 195, 1077
ErhI CCWWGG 3 cut(s) 81, 759, 1458
Esp3I CGTCTC 3 cut(s) 284, 956, 1104
FaeI CATG 8 cut(s) 85, 119, 199, 763, 769, 1081, 1232, 1956
FalI AAGNNNNNCTT 4 cut(s) 1521, 1553, 1889, 1921
FaqI GGGAC 4 cut(s) 342, 715, 895, 1810
FatI CATG 8 cut(s) 81, 115, 195, 759, 765, 1077, 1228, 1952
FauI CCCGC 5 cut(s) 2, 151, 260, 826, 1206
FbaI TGATCA 1 cut(s) 1852
FblI GTMKAC 1 cut(s) 845
FokI GGATG 6 cut(s) 338, 655, 925, 1266, 1329, 1573
FriOI GRGCYC 2 cut(s) 195, 1077
FspBI CTAG 4 cut(s) 386, 648, 1062, 1506
GlaI GCGC 2 cut(s) 300, 528
GsaI CCCAGC 2 cut(s) 398, 1524
GsuI CTGGAG 6 cut(s) 21, 27, 33, 542, 1004, 1520
HaeII RGCGCY 2 cut(s) 302, 530
HgaI GACGC 6 cut(s) 208, 272, 301, 350, 1037, 1121
HhaI GCGC 2 cut(s) 301, 529
Hin1I GRCGYC 2 cut(s) 342, 1113
Hin1II CATG 8 cut(s) 85, 119, 199, 763, 769, 1081, 1232, 1956
Hin6I GCGC 2 cut(s) 299, 527
HinP1I GCGC 2 cut(s) 299, 527
HincII GTYRAC 1 cut(s) 846
HindII GTYRAC 1 cut(s) 846
HinfI GANTC 5 cut(s) 310, 931, 1081, 1585, 1900
HphI GGTGA 2 cut(s) 958, 1000
Hpy166II GTNNAC 4 cut(s) 445, 571, 846, 1183
Hpy188I TCNGA 6 cut(s) 319, 605, 936, 1014, 1350, 1764
Hpy8I GTNNAC 4 cut(s) 445, 571, 846, 1183
Hpy99I CGWCG 7 cut(s) 344, 578, 802, 824, 847, 850, 1225
HpyAV CCTTC 7 cut(s) 53, 343, 464, 646, 903, 1636, 1930
HpyCH4III ACNGT 2 cut(s) 1801, 1840
HpyCH4IV ACGT 7 cut(s) 222, 441, 549, 573, 1179, 1679, 1942
HpyF3I CTNAG 2 cut(s) 1347, 1487
HpySE526I ACGT 7 cut(s) 222, 441, 549, 573, 1179, 1679, 1942
Hsp92I GRCGYC 2 cut(s) 342, 1113
Hsp92II CATG 8 cut(s) 85, 119, 199, 763, 769, 1081, 1232, 1956
HspAI GCGC 2 cut(s) 299, 527
Kpn2I TCCGGA 1 cut(s) 639
KroI GCCGGC 1 cut(s) 154
KroNI GCCGGC 1 cut(s) 156
Ksp22I TGATCA 1 cut(s) 1852
Kzo9I GATC 6 cut(s) 232, 605, 1009, 1332, 1852, 1876
LweI GCATC 8 cut(s) 612, 939, 957, 1324, 1551, 1660, 1693, 1903
MaeI CTAG 4 cut(s) 386, 648, 1062, 1506
MaeII ACGT 7 cut(s) 222, 441, 549, 573, 1179, 1679, 1942
MaeIII GTNAC 3 cut(s) 398, 500, 1231
MalI GATC 6 cut(s) 234, 607, 1011, 1334, 1854, 1878
MbiI CCGCTC 1 cut(s) 1494
MboI GATC 6 cut(s) 232, 605, 1009, 1332, 1852, 1876
MfeI CAATTG 1 cut(s) 1160
MflI RGATCY 1 cut(s) 605
MhlI GDGCHC 3 cut(s) 195, 1071, 1077
MlsI TGGCCA 1 cut(s) 1052
MluCI AATT 8 cut(s) 181, 431, 711, 769, 1140, 1160, 1274, 1320
MluI ACGCGT 1 cut(s) 1029
MluNI TGGCCA 1 cut(s) 1052
MlyI GAGTC 1 cut(s) 1075
MmeI TCCRAC 3 cut(s) 804, 1319, 1795
Mox20I TGGCCA 1 cut(s) 1052
MreI CGCCGGCG 1 cut(s) 154
MroI TCCGGA 1 cut(s) 639
MroNI GCCGGC 1 cut(s) 154
MroXI GAANNNNTTC 1 cut(s) 441
MscI TGGCCA 1 cut(s) 1052
MseI TTAA 1 cut(s) 306
MslI CAYNNNNRTG 1 cut(s) 764
Msp20I TGGCCA 1 cut(s) 1052
MspA1I CMGCKG 3 cut(s) 53, 68, 218
MspCI CTTAAG 1 cut(s) 305
MspR9I CCNGG 8 cut(s) 379, 476, 481, 678, 717, 749, 1054, 1660
MunI CAATTG 1 cut(s) 1160
Mva1269I GAATGC 1 cut(s) 726
MvaI CCWGG 4 cut(s) 379, 717, 1054, 1660
MvnI CGCG 3 cut(s) 283, 339, 1031
NaeI GCCGGC 1 cut(s) 156
NciI CCSGG 4 cut(s) 476, 481, 678, 749
NcoI CCATGG 2 cut(s) 81, 759
NdeII GATC 6 cut(s) 232, 605, 1009, 1332, 1852, 1876
NgoMIV GCCGGC 1 cut(s) 154
NheI GCTAGC 1 cut(s) 385
NlaIII CATG 8 cut(s) 85, 119, 199, 763, 769, 1081, 1232, 1956
NlaIV GGNNCC 9 cut(s) 64, 259, 358, 538, 607, 661, 753, 1206, 1389
NmeAIII GCCGAG 1 cut(s) 1707
NmuCI GTSAC 1 cut(s) 1231
NspI RCATGY 1 cut(s) 119
NspV TTCGAA 1 cut(s) 435
PagI TCATGA 2 cut(s) 195, 1077
PaqCI CACCTGC 1 cut(s) 934
PceI AGGCCT 1 cut(s) 1663
PcsI WCGNNNNNNNCGW 3 cut(s) 810, 819, 851
PctI GAATGC 1 cut(s) 726
PdiI GCCGGC 1 cut(s) 156
PdmI GAANNNNTTC 1 cut(s) 441
PfeI GAWTC 4 cut(s) 310, 931, 1585, 1900
PfoI TCCNGGA 2 cut(s) 377, 715
PleI GAGTC 1 cut(s) 1075
PpsI GAGTC 1 cut(s) 1075
PpuMI RGGWCCY 1 cut(s) 356
PsiI TTATAA 1 cut(s) 456
Psp124BI GAGCTC 2 cut(s) 195, 1077
Psp1406I AACGTT 1 cut(s) 441
Psp5II RGGWCCY 1 cut(s) 356
Psp6I CCWGG 4 cut(s) 377, 715, 1052, 1658
PspFI CCCAGC 2 cut(s) 394, 1520
PspGI CCWGG 4 cut(s) 377, 715, 1052, 1658
PspN4I GGNNCC 9 cut(s) 64, 259, 358, 538, 607, 661, 753, 1206, 1389
PspPPI RGGWCCY 1 cut(s) 356
PstI CTGCAG 1 cut(s) 1137
PstNI CAGNNNCTG 3 cut(s) 218, 1811, 1850
PsuI RGATCY 1 cut(s) 605
PvuII CAGCTG 2 cut(s) 53, 218
RsaI GTAC 5 cut(s) 812, 1577, 1628, 1725, 1941
RsaNI GTAC 5 cut(s) 811, 1576, 1627, 1724, 1940
RseI CAYNNNNRTG 1 cut(s) 764
Rsr2I CGGWCCG 1 cut(s) 315
RsrII CGGWCCG 1 cut(s) 315
SacI GAGCTC 2 cut(s) 195, 1077
SalI GTCGAC 1 cut(s) 844
SaqAI TTAA 1 cut(s) 306
Sau3AI GATC 6 cut(s) 232, 605, 1009, 1332, 1852, 1876
ScaI AGTACT 1 cut(s) 1628
SchI GAGTC 1 cut(s) 1075
ScrFI CCNGG 8 cut(s) 379, 476, 481, 678, 717, 749, 1054, 1660
SduI GDGCHC 3 cut(s) 195, 1071, 1077
SfaNI GCATC 8 cut(s) 612, 939, 957, 1324, 1551, 1660, 1693, 1903
SfcI CTRYAG 1 cut(s) 1133
SfuI TTCGAA 1 cut(s) 435
SgrAI CRCCGGYG 2 cut(s) 154, 1201
SgrDI CGTCGACG 1 cut(s) 844
SinI GGWCC 5 cut(s) 315, 356, 462, 568, 1225
SmiMI CAYNNNNRTG 1 cut(s) 764
SmlI CTYRAG 4 cut(s) 305, 1083, 1302, 1791
SmoI CTYRAG 4 cut(s) 305, 1083, 1302, 1791
SpeI ACTAGT 1 cut(s) 647
Sse9I AATT 8 cut(s) 181, 431, 711, 769, 1140, 1160, 1274, 1320
SseBI AGGCCT 1 cut(s) 1663
SspMI CTAG 4 cut(s) 386, 648, 1062, 1506
SstI GAGCTC 2 cut(s) 195, 1077
StuI AGGCCT 1 cut(s) 1663
StyD4I CCNGG 8 cut(s) 377, 474, 479, 676, 715, 747, 1052, 1658
StyI CCWWGG 3 cut(s) 81, 759, 1458
TaaI ACNGT 2 cut(s) 1801, 1840
TaiI ACGT 7 cut(s) 225, 444, 552, 576, 1182, 1682, 1945
TaqI TCGA 5 cut(s) 435, 845, 927, 1331, 1448
TaqII GACCGA 2 cut(s) 303, 1213
TasI AATT 8 cut(s) 181, 431, 711, 769, 1140, 1160, 1274, 1320
TatI WGTACW 1 cut(s) 1626
TfiI GAWTC 4 cut(s) 310, 931, 1585, 1900
Tru1I TTAA 1 cut(s) 306
Tru9I TTAA 1 cut(s) 306
TscAI CASTG 3 cut(s) 520, 661, 1482
TseFI GTSAC 1 cut(s) 1231
Tsp45I GTSAC 1 cut(s) 1231
TspDTI ATGAA 3 cut(s) 782, 953, 1268
TspGWI ACGGA 2 cut(s) 39, 1367
TspRI CASTG 3 cut(s) 520, 661, 1482
Vha464I CTTAAG 1 cut(s) 305
VpaK11BI GGWCC 5 cut(s) 315, 356, 462, 568, 1225
XapI RAATTY 3 cut(s) 431, 769, 1320
XceI RCATGY 1 cut(s) 119
XmiI GTMKAC 1 cut(s) 845
XmnI GAANNNNTTC 1 cut(s) 441
XspI CTAG 4 cut(s) 386, 648, 1062, 1506
ZrmI AGTACT 1 cut(s) 1628
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.