Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0004477

Physical Location & Seq

Genomic Coordinates Reverse (-)

6406774 .. 6411758

Gene Structure 4985 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g11300.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2181 bp

ATGGGTGAAGCTGAGAAAGGTTCAGTGATTAAAGAGAAGCTTAGGGGTCTTTGTGTTGGTAATGGGTGGTCTTATGGGGTTTTCTGGCGTTTTGATCAGAGAAATTCCATGTTGTTGACAATGGGAGAAGCCTATTATGAAGAGCACATGGGAGCAGTGATTGAAAATATGCTTTCACAGGTCCACATGCTTGGAGAAGGTGTTATTGGTCAAACTGCTTTCACCGGGAAGCATCAATGGATGCATTCAGATGCTTACAATGGACAGTGGAATTCATGCAATCCCATCGAAAGTTGTAGTAATCTGTTTCAGGATGATTCTGAGTTCCATTGCCAATTTTCCTCTGGTGTAAAGACAATTGCAACAGTCTCTGTGGAATCAGGAGTAATTCAGTTTGGATCCACTGAAAAGATTATGGAGAGGCTGGAGTTTTTAGACGAAACAAAAAGGGTGTTCCAGGAGATCAAAAATCTTCATGGGATTATTCCTCTGTCTACAGCATCTGATGACATGGGCTCAGCTGATAAAACCCTGTGGTTTAGTACATGGAGTACTGAACCTTCTTTGTTGGCCTCATATGACCCACATTTGGCATCTGATATTGGGGTTCAGGATTCTCTTAAGACTTGCAGAAACACAGCTCAAGACTCAACTCTCATTCAAGGCAGCTGTGGATATCAGATGGATAATCAGCAATATCTACAGGGATACCCTGTAGAGTTTAACCGAGCTGATTGTATTACAGATGTTTCCAAATCATTCATGGATGATCTTTCTCAGTGGTTTGCTGCTTCCCCAGAACAGAACTTCAATGGCATGGCAACCACAATGAATGGTGACCTGTCACCAGTGTTTGAAAGTACTCCAGTGTCATCTAGTCTGGTTAAAGGTGATACTTCTATCAACTCACCAATTGAGCATCCAGCAACTTCTATGCAAAGTTCCATCACAAATGCATTCAGTGCTGATGCTCATGAGAAATATATGACAATTCAGAGTGCTGGAAAGGATTTGTTTCATGGTTTGGGAACAGTTCTCGGTGGTGGTCAAGTCCGTGAGTGCTGGGAAGATAGTATAATGCCAGTAGTCAGTGCTGACTGCTTGGCTGCCGGAACTGATTTGACCAAAGAGGCGGAAGTTGGTTCTGTGGCTGTCCCCCGGAGGGGGTTATTCTCGGAATTAGGACTAGAAGAGCTTCTAAATGGAATGAATTCTACTTCAAGCTCTGTGACTAAATGCAGTCTAGAAGACCAATTATCCACCAGGAAAAGGAAATTAGAAAGTTCATCTGTGGGCAGTAATCAGGTACAGCTAGGAAGGCTTGCTGGTTCTGGAGGGAGCATGCATTTGACAGGACCTTTGTATAACTTGGACAAGACAAACTGTCTTGTACCAAAGAAAGAGGTTCTCCCAAAATCACAGGTGGGCTTATGGATCGATGATAGTTATAGTGTCAATGCTAGAAGTATGTCTCAAGCAAAACCACAGAAGGCTGAGGATCACACAAAGACCGCCAAGAAGAGGGCAAAGCCTGGAGAGAGTACTCGACCAAGGCCCAAGGATCGTCAGCAGATCCAAGACCGTATGAAAGACTTGAGGGGGATGATTCCCAATGGTGGCAAGTGTAGCATTGATGCTTTGCTGGACCGCACCATCAAGTACATGATTTTCTTGCAAGGTGTGACGAAACATGCTGATAAGCTTAAACAACCTCATGAGTCAAAGCTGACTGGAAAGGAAAATGGTGTGGTTCTAAAAGATCACAGCAGTATATCTGGTGGTAACAATACTTGGGCATTAGCAGTTGAGGGTCAAAATGTGGTTTGCCCTATACTCGTTGAGGACCTTAGTACACCTGGCCAAATGCTTATTGAGATCCTCTGTGAGGAGCATGGTTTCTTTCTTGAGTTAGCAGACGAAATCCGGGGCTTTGGGTTGAATATCTTGAAGGGGGTGATGGAGAGCCGCGAGGAGAAGATATGGGCGCGCTTTATCGTTGAGGCAACTAGGCATATAACCAGGATAGAAGTATTTTGGTCCCTTGTCCGGCTTCTTCAGCAAAATGGTACCAGTGTGGTTGATCCAACCAGTCGGCCCAGCAATGTAGCAGACACTGGGTTTCCTCCTGTATTGGATAGTGTCCAGCCATGTAGTTTTCCTCCTCCCATCAGCTTGACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000280 GO:0003006 GO:0003674 GO:0003700 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006355 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006996 GO:0007049 GO:0007140 GO:0007154 GO:0007165 GO:0007275 GO:0007276 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009733 GO:0009791 GO:0009888 GO:0009889 GO:0009987 GO:0010033 GO:0010087 GO:0010089 GO:0010154 GO:0010468 GO:0010556 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019219 GO:0019222 GO:0019538 GO:0019953 GO:0022402 GO:0022412 GO:0022414 GO:0022622 GO:0023052 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032504 GO:0032870 GO:0035556 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0044703 GO:0048232 GO:0048285 GO:0048316 GO:0048364 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051321 GO:0051704 GO:0051716 GO:0060255 GO:0061458 GO:0065007 GO:0070887 GO:0071310 GO:0071365 GO:0071495 GO:0071704 GO:0071840 GO:0080090 GO:0090058 GO:0099402 GO:0140013 GO:0140096 GO:0140110 GO:1901564 GO:1903046 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

bHLH-MYC_N

Protein Analysis

727

Amino Acids

79.75

Weight (kDa)

5.35

Isoelectric Point (pI)

40.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
bHLH-MYC_N	PF14215	11 - 48	4.3e-07	bHLH-MYC and R2R3-MYB transcription factors N-terminal
bHLH-MYC_N	PF14215	57 - 152	1.4e-16	bHLH-MYC and R2R3-MYB transcription factors N-terminal
bHLH_LHW	PF23176	569 - 629	1.1e-28	Transcription factor LHW bHLH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0004477)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G64625 AT1G64625 AT1G64625 AT1G64625 AT5G24352 AT5G24352
fragaria_vesca	FvH4_4g16070 FvH4_4g16070 FvH4_4g16070 FvH4_5g11300 FvH4_5g11300 FvH4_5g11300 FvH4_5g11300 FvH4_5g11300
malus_domestica	MD06G1114400.v1.1 MD14G1135600.v1.1
prunus_persica	Prupe.5G127100_v2.0.a1
pyrus_communis	pycom06g10710 pycom14g10880 pycom14g10890
rosa_chinensis	RchiOBHm_Chr7g0186541
rosa_laevigata	RLG00000004836
rosa_multiflora	Rmu_sc0000645.1_g000021
rosa_roxburghii	Rroxscaffold_3G00268060
rosa_rugosa	Rorug06G0475000 Rorug06G0475000
rosa_samantha	Rh7AG066100 Rh7BG082000 Rh7CG081700 Rh7DG082700
rosa_wichuraiana	Rw7G006870 Rw7G007090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	2066
AccB1I	GGYRCC	1 cut(s)	2066
AccI	GTMKAC	1 cut(s)	494
AccII	CGCG	2 cut(s)	1968, 1987
AciI	CCGC	4 cut(s)	1133, 1512, 1648, 1966
AclWI	GGATC	8 cut(s)	393, 406, 1442, 1506, 1567, 1569, 1870, 2075
AcoI	YGGCCR	1 cut(s)	1858
AcsI	RAATTY	3 cut(s)	103, 271, 1210
AcuI	CTGAAG	1 cut(s)	2039
AfaI	GTAC	9 cut(s)	544, 553, 862, 1308, 1392, 1543, 1661, 1852, 2068
AfiI	CCNNNNNNNGG	9 cut(s)	589, 1162, 1163, 1164, 1269, 1521, 1616, 1885, 2046
AflII	CTTAAG	1 cut(s)	620
AgsI	TTSAA	7 cut(s)	164, 662, 811, 857, 1221, 1939, 1948
AhdI	GACNNNNNGTC	1 cut(s)	1383
AjnI	CCWGG	5 cut(s)	456, 1262, 1531, 1855, 2018
AjuI	GAANNNNNNNTTGG	2 cut(s)	189, 221
Alw21I	GWGCWC	1 cut(s)	147
Alw26I	GTCTC	2 cut(s)	373, 1476
AlwI	GGATC	8 cut(s)	393, 406, 1442, 1506, 1567, 1569, 1870, 2075
AlwNI	CAGNNNCTG	3 cut(s)	371, 503, 2114
AoxI	GGCC	4 cut(s)	570, 1553, 1858, 2093
ApeKI	GCWGC	3 cut(s)	666, 788, 1106
ApoI	RAATTY	3 cut(s)	103, 271, 1210
ArsI	GACNNNNNNTTYG	2 cut(s)	1342, 1374
Asp700I	GAANNNNTTC	2 cut(s)	1194, 1210
Asp718I	GGTACC	1 cut(s)	2066
AspLEI	GCGC	2 cut(s)	1987, 1989
AspS9I	GGNCC	7 cut(s)	181, 1355, 1554, 1645, 1843, 2037, 2094
AsuC2I	CCSGG	3 cut(s)	226, 1159, 1925
AsuHPI	GGTGA	7 cut(s)	17, 214, 837, 848, 900, 902, 1966
AvaII	GGWCC	5 cut(s)	181, 1355, 1645, 1843, 2037
BaeI	ACNNNNGTAYC	2 cut(s)	2058, 2091
BalI	TGGCCA	1 cut(s)	1860
BamHI	GGATCC	1 cut(s)	398
BanI	GGYRCC	1 cut(s)	2066
BanII	GRGCYC	1 cut(s)	518
BarI	GAAGNNNNNNTAC	2 cut(s)	544, 576
BbsI	GAAGAC	1 cut(s)	1254
Bbv12I	GWGCWC	1 cut(s)	147
BbvCI	CCTCAGC	1 cut(s)	1494
BbvI	GCAGC	3 cut(s)	678, 775, 1093
BccI	CCATC	6 cut(s)	293, 676, 953, 1661, 1951, 2174
BcgI	CGANNNNNNTGC	2 cut(s)	268, 302
BciT130I	CCWGG	5 cut(s)	458, 1264, 1533, 1857, 2020
BciVI	GTATCC	1 cut(s)	701
BclI	TGATCA	1 cut(s)	94
BcnI	CCSGG	3 cut(s)	226, 1159, 1925
BcoDI	GTCTC	2 cut(s)	373, 1476
BfaI	CTAG	6 cut(s)	876, 1187, 1244, 1313, 1461, 2007
BfmI	CTRYAG	3 cut(s)	495, 701, 714
BfrI	CTTAAG	1 cut(s)	620
BfuI	GTATCC	1 cut(s)	701
BisI	GCNGC	4 cut(s)	667, 789, 1107, 1966
BlpI	GCTNAGC	1 cut(s)	517
BlsI	GCNGC	4 cut(s)	668, 790, 1108, 1967
BmcAI	AGTACT	3 cut(s)	553, 862, 1543
Bme1390I	CCNGG	8 cut(s)	226, 458, 1159, 1264, 1533, 1857, 1925, 2020
Bme18I	GGWCC	5 cut(s)	181, 1355, 1645, 1843, 2037
BmeRI	GACNNNNNGTC	1 cut(s)	1383
BmgT120I	GGNCC	7 cut(s)	181, 1355, 1554, 1645, 1843, 2037, 2094
BmiI	GGNNCC	3 cut(s)	400, 2039, 2068
BmrFI	CCNGG	8 cut(s)	226, 458, 1159, 1264, 1533, 1857, 1925, 2020
BmrI	ACTGGG	1 cut(s)	2124
BmsI	GCATC	8 cut(s)	231, 241, 241, 509, 602, 928, 958, 1624
BmuI	ACTGGG	1 cut(s)	2124
BpiI	GAAGAC	1 cut(s)	1254
BpmI	CTGGAG	4 cut(s)	446, 849, 1353, 1554
Bpu10I	CCTNAGC	2 cut(s)	41, 1494
Bpu1102I	GCTNAGC	1 cut(s)	517
BpuEI	CTTGAG	4 cut(s)	627, 1458, 1615, 1925
BpuMI	CCSGG	3 cut(s)	226, 1159, 1925
Bsa29I	ATCGAT	1 cut(s)	1437
BsaJI	CCNNGG	4 cut(s)	1157, 1550, 1557, 1924
BsaXI	ACNNNNNCTCC	2 cut(s)	186, 216
Bsc4I	CCNNNNNNNGG	9 cut(s)	589, 1162, 1163, 1164, 1269, 1521, 1616, 1885, 2046
Bse1I	ACTGG	7 cut(s)	848, 866, 1082, 1735, 2070, 2088, 2119
Bse3DI	GCAATG	2 cut(s)	328, 2107
BseBI	CCWGG	5 cut(s)	458, 1264, 1533, 1857, 2020
BseCI	ATCGAT	1 cut(s)	1437
BseDI	CCNNGG	4 cut(s)	1157, 1550, 1557, 1924
BseGI	GGATG	5 cut(s)	246, 319, 772, 919, 1608
BseLI	CCNNNNNNNGG	9 cut(s)	589, 1162, 1163, 1164, 1269, 1521, 1616, 1885, 2046
BseMI	GCAATG	2 cut(s)	328, 2107
BseMII	CTCAG	4 cut(s)	312, 531, 791, 1485
BseNI	ACTGG	7 cut(s)	848, 866, 1082, 1735, 2070, 2088, 2119
BsePI	GCGCGC	1 cut(s)	1985
BseRI	GAGGAG	3 cut(s)	1901, 1985, 2151
BseXI	GCAGC	3 cut(s)	678, 775, 1093
BseYI	CCCAGC	2 cut(s)	1062, 2096
Bsh1236I	CGCG	2 cut(s)	1968, 1987
BshFI	GGCC	4 cut(s)	572, 1555, 1860, 2095
BshNI	GGYRCC	1 cut(s)	2066
BshVI	ATCGAT	1 cut(s)	1437
BsiHKAI	GWGCWC	1 cut(s)	147
BsiSI	CCGG	5 cut(s)	225, 1110, 1159, 1924, 2047
BslFI	GGGAC	2 cut(s)	1139, 2023
BslI	CCNNNNNNNGG	9 cut(s)	589, 1162, 1163, 1164, 1269, 1521, 1616, 1885, 2046
BsmAI	GTCTC	2 cut(s)	373, 1476
BsmFI	GGGAC	2 cut(s)	1139, 2023
BsmI	GAATGC	2 cut(s)	244, 956
BsnI	GGCC	4 cut(s)	572, 1555, 1860, 2095
Bsp1286I	GDGCHC	2 cut(s)	147, 518
Bsp1720I	GCTNAGC	1 cut(s)	517
BspACI	CCGC	4 cut(s)	1133, 1512, 1648, 1966
BspANI	GGCC	4 cut(s)	572, 1555, 1860, 2095
BspCNI	CTCAG	5 cut(s)	4, 313, 530, 790, 1486
BspDI	ATCGAT	1 cut(s)	1437
BspFNI	CGCG	2 cut(s)	1968, 1987
BspHI	TCATGA	2 cut(s)	973, 1714
BspLI	GGNNCC	3 cut(s)	400, 2039, 2068
BspPI	GGATC	8 cut(s)	393, 406, 1442, 1506, 1567, 1569, 1870, 2075
BspQI	GCTCTTC	2 cut(s)	135, 1185
BspT107I	GGYRCC	1 cut(s)	2066
BspTI	CTTAAG	1 cut(s)	620
BsrDI	GCAATG	2 cut(s)	328, 2107
BsrI	ACTGG	7 cut(s)	848, 866, 1082, 1735, 2070, 2088, 2119
BssECI	CCNNGG	4 cut(s)	1157, 1550, 1557, 1924
BssHII	GCGCGC	1 cut(s)	1985
BssT1I	CCWWGG	2 cut(s)	1550, 1557
Bst2UI	CCWGG	5 cut(s)	458, 1264, 1533, 1857, 2020
Bst4CI	ACNGT	5 cut(s)	267, 367, 1033, 1385, 1583
Bst6I	CTCTTC	3 cut(s)	135, 1185, 1514
BstAFI	CTTAAG	1 cut(s)	620
BstAPI	GCANNNNNTGC	1 cut(s)	962
BstC8I	GCNNGC	3 cut(s)	1323, 1343, 1987
BstDEI	CTNAG	7 cut(s)	12, 41, 321, 517, 777, 1494, 1847
BstEII	GGTNACC	1 cut(s)	836
BstENI	CCTNNNNNAGG	1 cut(s)	1883
BstF5I	GGATG	5 cut(s)	246, 319, 772, 919, 1608
BstFNI	CGCG	2 cut(s)	1968, 1987
BstHHI	GCGC	2 cut(s)	1987, 1989
BstMAI	GTCTC	2 cut(s)	373, 1476
BstMWI	GCNNNNNNNGC	4 cut(s)	962, 1318, 1626, 2056
BstNI	CCWGG	5 cut(s)	458, 1264, 1533, 1857, 2020
BstNSI	RCATGY	3 cut(s)	190, 1345, 1694
BstPI	GGTNACC	1 cut(s)	836
BstSCI	CCNGG	8 cut(s)	224, 456, 1157, 1262, 1531, 1855, 1923, 2018
BstSFI	CTRYAG	3 cut(s)	495, 701, 714
BstUI	CGCG	2 cut(s)	1968, 1987
BstV1I	GCAGC	3 cut(s)	678, 775, 1093
BstV2I	GAAGAC	1 cut(s)	1254
BstX2I	RGATCY	3 cut(s)	398, 1572, 1875
BstXI	CCANNNNNNTGG	1 cut(s)	191
BstYI	RGATCY	3 cut(s)	398, 1572, 1875
Bsu15I	ATCGAT	1 cut(s)	1437
BsuI	GTATCC	1 cut(s)	701
BsuRI	GGCC	4 cut(s)	572, 1555, 1860, 2095
BsuTUI	ATCGAT	1 cut(s)	1437
BtsCI	GGATG	5 cut(s)	246, 319, 772, 919, 1608
BtsI	GCAGTG	1 cut(s)	162
Cac8I	GCNNGC	3 cut(s)	1323, 1343, 1987
CaiI	CAGNNNCTG	3 cut(s)	371, 503, 2114
CciI	TCATGA	2 cut(s)	973, 1714
CfoI	GCGC	2 cut(s)	1987, 1989
Cfr13I	GGNCC	7 cut(s)	181, 1355, 1554, 1645, 1843, 2037, 2094
ClaI	ATCGAT	1 cut(s)	1437
Csp6I	GTAC	9 cut(s)	543, 552, 861, 1307, 1391, 1542, 1660, 1851, 2067
CviQI	GTAC	9 cut(s)	543, 552, 861, 1307, 1391, 1542, 1660, 1851, 2067
DdeI	CTNAG	7 cut(s)	12, 41, 321, 517, 777, 1494, 1847
DriI	GACNNNNNGTC	1 cut(s)	1383
EaeI	YGGCCR	1 cut(s)	1858
Eam1104I	CTCTTC	3 cut(s)	135, 1185, 1514
Eam1105I	GACNNNNNGTC	1 cut(s)	1383
EarI	CTCTTC	3 cut(s)	135, 1185, 1514
EciI	GGCGGA	1 cut(s)	1148
Eco130I	CCWWGG	2 cut(s)	1550, 1557
Eco24I	GRGCYC	1 cut(s)	518
Eco32I	GATATC	1 cut(s)	677
Eco47I	GGWCC	5 cut(s)	181, 1355, 1645, 1843, 2037
Eco57I	CTGAAG	1 cut(s)	2039
Eco91I	GGTNACC	1 cut(s)	836
EcoNI	CCTNNNNNAGG	1 cut(s)	1883
EcoO109I	RGGNCCY	2 cut(s)	1355, 1843
EcoO65I	GGTNACC	1 cut(s)	836
EcoRI	GAATTC	2 cut(s)	271, 1210
EcoRII	CCWGG	5 cut(s)	456, 1262, 1531, 1855, 2018
EcoRV	GATATC	1 cut(s)	677
EcoT14I	CCWWGG	2 cut(s)	1550, 1557
EcoT22I	ATGCAT	3 cut(s)	246, 958, 1347
EcoT38I	GRGCYC	1 cut(s)	518
ErhI	CCWWGG	2 cut(s)	1550, 1557
FalI	AAGNNNNNCTT	2 cut(s)	24, 56
FaqI	GGGAC	2 cut(s)	1139, 2023
FauNDI	CATATG	1 cut(s)	577
FbaI	TGATCA	1 cut(s)	94
FblI	GTMKAC	1 cut(s)	494
Fnu4HI	GCNGC	4 cut(s)	667, 789, 1107, 1966
FokI	GGATG	5 cut(s)	253, 326, 779, 906, 1615
FriOI	GRGCYC	1 cut(s)	518
Fsp4HI	GCNGC	4 cut(s)	667, 789, 1107, 1966
FspBI	CTAG	6 cut(s)	876, 1187, 1244, 1313, 1461, 2007
GlaI	GCGC	2 cut(s)	1986, 1988
GluI	GCNGC	4 cut(s)	667, 789, 1107, 1966
GsaI	CCCAGC	2 cut(s)	1066, 2100
GsuI	CTGGAG	4 cut(s)	446, 849, 1353, 1554
HaeIII	GGCC	4 cut(s)	572, 1555, 1860, 2095
HapII	CCGG	5 cut(s)	225, 1110, 1159, 1924, 2047
HhaI	GCGC	2 cut(s)	1987, 1989
Hin6I	GCGC	2 cut(s)	1985, 1987
HinP1I	GCGC	2 cut(s)	1985, 1987
HincII	GTYRAC	1 cut(s)	117
HindII	GTYRAC	1 cut(s)	117
HindIII	AAGCTT	2 cut(s)	38, 1700
HinfI	GANTC	6 cut(s)	317, 377, 614, 647, 1606, 1718
HpaII	CCGG	5 cut(s)	225, 1110, 1159, 1924, 2047
HphI	GGTGA	7 cut(s)	17, 214, 837, 848, 900, 902, 1966
Hpy166II	GTNNAC	4 cut(s)	117, 184, 495, 1853
Hpy188I	TCNGA	8 cut(s)	99, 250, 322, 505, 598, 681, 996, 1177
Hpy8I	GTNNAC	4 cut(s)	117, 184, 495, 1853
HpyAV	CCTTC	5 cut(s)	191, 570, 1311, 1483, 1942
HpyCH4III	ACNGT	5 cut(s)	267, 367, 1033, 1385, 1583
HpyCH4V	TGCA	9 cut(s)	244, 279, 362, 630, 937, 956, 1239, 1345, 1675
HpyF10VI	GCNNNNNNNGC	4 cut(s)	962, 1318, 1626, 2056
HpyF3I	CTNAG	7 cut(s)	12, 41, 321, 517, 777, 1494, 1847
HspAI	GCGC	2 cut(s)	1985, 1987
KpnI	GGTACC	1 cut(s)	2070
Ksp22I	TGATCA	1 cut(s)	94
LguI	GCTCTTC	2 cut(s)	135, 1185
LmnI	GCTCC	3 cut(s)	152, 1338, 1888
Lsp1109I	GCAGC	3 cut(s)	678, 775, 1093
LweI	GCATC	8 cut(s)	231, 241, 241, 509, 602, 928, 958, 1624
MaeI	CTAG	6 cut(s)	876, 1187, 1244, 1313, 1461, 2007
MaeIII	GTNAC	5 cut(s)	836, 843, 1228, 1681, 1781
MboII	GAAGA	8 cut(s)	152, 464, 1079, 1202, 1259, 1531, 1987, 2045
MfeI	CAATTG	2 cut(s)	357, 912
MflI	RGATCY	3 cut(s)	398, 1572, 1875
MhlI	GDGCHC	2 cut(s)	147, 518
MlsI	TGGCCA	1 cut(s)	1860
MluNI	TGGCCA	1 cut(s)	1860
MlyI	GAGTC	2 cut(s)	641, 1727
MmeI	TCCRAC	1 cut(s)	2108
Mox20I	TGGCCA	1 cut(s)	1860
Mph1103I	ATGCAT	3 cut(s)	246, 958, 1347
MroXI	GAANNNNTTC	2 cut(s)	1194, 1210
MscI	TGGCCA	1 cut(s)	1860
MseI	TTAA	5 cut(s)	30, 621, 723, 885, 1704
MslI	CAYNNNNRTG	1 cut(s)	249
Msp20I	TGGCCA	1 cut(s)	1860
MspA1I	CMGCKG	2 cut(s)	521, 669
MspCI	CTTAAG	1 cut(s)	620
MspI	CCGG	5 cut(s)	225, 1110, 1159, 1924, 2047
MspR9I	CCNGG	8 cut(s)	226, 458, 1159, 1264, 1533, 1857, 1925, 2020
MunI	CAATTG	2 cut(s)	357, 912
Mva1269I	GAATGC	2 cut(s)	244, 956
MvaI	CCWGG	5 cut(s)	458, 1264, 1533, 1857, 2020
MvnI	CGCG	2 cut(s)	1968, 1987
MwoI	GCNNNNNNNGC	4 cut(s)	962, 1318, 1626, 2056
NciI	CCSGG	3 cut(s)	226, 1159, 1925
NdeI	CATATG	1 cut(s)	577
NlaIV	GGNNCC	3 cut(s)	400, 2039, 2068
NmuCI	GTSAC	4 cut(s)	836, 843, 1228, 1681
NsiI	ATGCAT	3 cut(s)	246, 958, 1347
NspI	RCATGY	3 cut(s)	190, 1345, 1694
PaeI	GCATGC	1 cut(s)	1345
PagI	TCATGA	2 cut(s)	973, 1714
PauI	GCGCGC	1 cut(s)	1985
PciSI	GCTCTTC	2 cut(s)	135, 1185
PctI	GAATGC	2 cut(s)	244, 956
PdmI	GAANNNNTTC	2 cut(s)	1194, 1210
PfeI	GAWTC	4 cut(s)	317, 377, 614, 1606
PfoI	TCCNGGA	1 cut(s)	456
PkrI	GCNGC	4 cut(s)	668, 790, 1108, 1967
PleI	GAGTC	2 cut(s)	641, 1726
PpsI	GAGTC	2 cut(s)	641, 1726
PpuMI	RGGWCCY	2 cut(s)	1355, 1843
Psp5II	RGGWCCY	2 cut(s)	1355, 1843
Psp6I	CCWGG	5 cut(s)	456, 1262, 1531, 1855, 2018
PspEI	GGTNACC	1 cut(s)	836
PspFI	CCCAGC	2 cut(s)	1062, 2096
PspGI	CCWGG	5 cut(s)	456, 1262, 1531, 1855, 2018
PspN4I	GGNNCC	3 cut(s)	400, 2039, 2068
PspPI	GGNCC	7 cut(s)	181, 1355, 1554, 1645, 1843, 2037, 2094
PspPPI	RGGWCCY	2 cut(s)	1355, 1843
PstNI	CAGNNNCTG	3 cut(s)	371, 503, 2114
PsuI	RGATCY	3 cut(s)	398, 1572, 1875
PteI	GCGCGC	1 cut(s)	1985
PvuII	CAGCTG	2 cut(s)	521, 669
RsaI	GTAC	9 cut(s)	544, 553, 862, 1308, 1392, 1543, 1661, 1852, 2068
RsaNI	GTAC	9 cut(s)	543, 552, 861, 1307, 1391, 1542, 1660, 1851, 2067
RseI	CAYNNNNRTG	1 cut(s)	249
SapI	GCTCTTC	2 cut(s)	135, 1185
SaqAI	TTAA	5 cut(s)	30, 621, 723, 885, 1704
SatI	GCNGC	4 cut(s)	667, 789, 1107, 1966
Sau96I	GGNCC	7 cut(s)	181, 1355, 1554, 1645, 1843, 2037, 2094
ScaI	AGTACT	3 cut(s)	553, 862, 1543
SchI	GAGTC	2 cut(s)	641, 1727
ScrFI	CCNGG	8 cut(s)	226, 458, 1159, 1264, 1533, 1857, 1925, 2020
SduI	GDGCHC	2 cut(s)	147, 518
SfaNI	GCATC	8 cut(s)	231, 241, 241, 509, 602, 928, 958, 1624
SfcI	CTRYAG	3 cut(s)	495, 701, 714
SinI	GGWCC	5 cut(s)	181, 1355, 1645, 1843, 2037
SmiMI	CAYNNNNRTG	1 cut(s)	249
SmlI	CTYRAG	5 cut(s)	620, 642, 1473, 1594, 1904
SmoI	CTYRAG	5 cut(s)	620, 642, 1473, 1594, 1904
SphI	GCATGC	1 cut(s)	1345
SsiI	CCGC	4 cut(s)	1133, 1512, 1648, 1966
SspMI	CTAG	6 cut(s)	876, 1187, 1244, 1313, 1461, 2007
StyD4I	CCNGG	8 cut(s)	224, 456, 1157, 1262, 1531, 1855, 1923, 2018
StyI	CCWWGG	2 cut(s)	1550, 1557
TaaI	ACNGT	5 cut(s)	267, 367, 1033, 1385, 1583
TaqI	TCGA	3 cut(s)	288, 1437, 1546
TatI	WGTACW	6 cut(s)	542, 551, 860, 1541, 1659, 1850
TauI	GCSGC	1 cut(s)	1968
TfiI	GAWTC	4 cut(s)	317, 377, 614, 1606
Tru1I	TTAA	5 cut(s)	30, 621, 723, 885, 1704
Tru9I	TTAA	5 cut(s)	30, 621, 723, 885, 1704
TseFI	GTSAC	4 cut(s)	836, 843, 1228, 1681
TseI	GCWGC	3 cut(s)	666, 788, 1106
Tsp45I	GTSAC	4 cut(s)	836, 843, 1228, 1681
TspDTI	ATGAA	9 cut(s)	153, 264, 464, 751, 845, 1007, 1223, 1275, 1601
TspGWI	ACGGA	1 cut(s)	1043
Vha464I	CTTAAG	1 cut(s)	620
VpaK11BI	GGWCC	5 cut(s)	181, 1355, 1645, 1843, 2037
XagI	CCTNNNNNAGG	1 cut(s)	1883
XapI	RAATTY	3 cut(s)	103, 271, 1210
XbaI	TCTAGA	1 cut(s)	1243
XceI	RCATGY	3 cut(s)	190, 1345, 1694
XcmI	CCANNNNNNNNNTGG	2 cut(s)	341, 760
XmiI	GTMKAC	1 cut(s)	494
XmnI	GAANNNNTTC	2 cut(s)	1194, 1210
XspI	CTAG	6 cut(s)	876, 1187, 1244, 1313, 1461, 2007
ZrmI	AGTACT	3 cut(s)	553, 862, 1543
Zsp2I	ATGCAT	3 cut(s)	246, 958, 1347

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.