Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0004477

Physical Location & Seq

Genomic Coordinates Forward (+)

12428297 .. 12433322

Gene Structure 5026 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G127100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2391 bp

ATGGGTGAAGCTGGGAAAAGTTCTGTGATTAGAGAGACACTTGAGAGTCTTTGTGTTAGTAATGGGTGGTCTTATGGGGTTTTCTGGCGCTTTGATAAGAGAAATTCCATGTTGTTGACCATGGGAGATGCATATTATGAAGAGCACATGGGAGCAGTGATGGACAGTATGCTTCCGCAGGTCCACATGCTTGGAGAAGGTATTATTGGGCAAACGGCTTTCACGGGGAAGCACCGGTGGATGCATTCAGATGCTCCTAGCGGAGAATGGAGTTCATGCAATTCTCTTGAAAGTCAAGATATGTTCCAGGATGATTCTGAGCTCAGGTGCCAATTTTCTTCTGGTATAAAGACAATTGCGACAATCTCTGTTGAACCACGAGGAGTAATTCAGTTCGGATCCACCAAAAAGATTATGGAGCGGTCTGAAGTTTTGGATGAAACAAAAAGGTTGTTCTGGGAGATGGAAAGTCTTGATGGGCTTATTCCTTTGGAAAATGTTCCATCATGTTTGAACAATGGTACTAATGATCTAAATGAGTTGTTTGCTTCCTTAATTTCATCTGGGAATTCCTATAATGGAGATGTCACCTGGACCCTTGGTGATAAATTTAAAGAGCTCCGAGGAAACGATACTTCTGCAATGAATTTACATTCTACATCATCTGATGACATTGGCTCAGCTGATAAAACCCCTTGGTTTAGTACATGGAGTACTGAGTCTTCTTATTTGACTTCATTCGACCCGCAGTTGACATCTGAAATTAGGGTTCAGGATTCTCATGAATCTTGCAGAAATACAGCACAGAATATTCAGATGGAATCAACATTCACTTCATTGGCTGACTTAGCGAAGCCTATTCAAGGCAGCTGTGGATATCAGATGGATAACCAGCATTCTCTGCATGGTTTCCCAGTGGAGTTTAACCCAACTGATTTTACTACAAATATCTCTAAATTCTGCCAGGTGGATGATCTTTCCCAGTGGTTTGCTGCTTCACCAGAACAGAACATCAATGGAATGGCAACCACACTGAATGATGACCTCTCACAAGTAATGGAAAGTACTTCGGGGTCATCTGGTCTGGTTAAAGGTGATAGGTTCATTGATGCTCCAATCGAACATCCAGATAATTCCATGCACAGTTCCATTACAAATCCTTTCAATGCTGGTGGACATGAGAATTCTGTATTCATTCAGAATGCTGAAAATGGTTTGTTTGATGGTTTGGGACCAGATTTTGGTTGCGGTCAAGTAGGGGAGTGTTGGGAAGATATTATGGTGCCGGCAGTCAGTGGTGGCTACTTGAACACTGGTACTGCTTTGACCAAATGCTTCTCAGAGCCAGAAGTTGGTTCCATGACAGCTCCTCGGAAAGGGTTGTTCTCGGAATTAGGACTGGAAGAGCTTTTAAATGGTATAAGTACTACTACAAGCTCCGTGTTTAAAAGCAGTCTAGAGGACCTTTCATCCACCACCCGAAAAAGGAAATCAGAATGTTCATCTGTGAACAGTAACCAGGTTCAGTTTGCAAGGCTTGCTGGCTCTAGTGGGAGCATGCATTCAACGGAGCCTTTGTATAACCTGGACAAGACAAACAGTCTTGTACCAAAGAAAGATTTTTTCCCAAAATCACAGGTCGGTTTATGGATTGATGATAGCTATAGTGTCAACGCTAGAAGTGCTGCACAAGATAAACAACAGCAGGCTGAGGAACACACAAAGACCACCAGGAAAAGGGCAAGGCCTGGGGAGAGTACTCGACCAAGGCCCAAGGATCGTCAGCAGATCCAAGACCGTATGAAAGAGTTGAGAGGGATCATCCCCAGTGGTGGCAAGTGTAGCATAGATTCGTTGTTGGACCGAACCATCAAATACATGCTCTTCTTGCAAAGCGTGACGAAATATGCAGATAAACTTAAACAGGCTCATGAGCCAAAGCTAATTGGCAAGGAGAATGGTGTGGTTCTAAAAGACAACAACAACCGATCTGCTGGTAATACATGGGCATTAGCAGTCGAGGGTCAAACAGTGGTTTGCCCTATAATAGTTGAGGACCTTAGTCCACCTGGCCAAATGCTTATTGAGATGCTTTGTGAGGAACAAGGTTTCTTCCTTGAGATAGCAGACATAATCCGGGGCTTTGGGTTAAATATTTTGAAGGGGGAGATGGAAAGTCGAGAGGATAAGATATGGGCACGATTTATTGTTGAGGCAAATAGGCATGTAACAAGGATAGATGTATTCTGGTCCCTTCTCCGTCTTCTTCAGCAAACAACAAACAATGTGGTTGATCCAACCAATCTGCCGACTAATATCGTAGATAGCGGAGTTCCTATATTGGATAGTTGTCAACAACAAAGTTTACCTCCTCCCATCAGCTTGTCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000280 GO:0003006 GO:0003674 GO:0003700 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006355 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006996 GO:0007049 GO:0007140 GO:0007154 GO:0007165 GO:0007275 GO:0007276 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009733 GO:0009791 GO:0009888 GO:0009889 GO:0009987 GO:0010033 GO:0010087 GO:0010089 GO:0010154 GO:0010468 GO:0010556 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019219 GO:0019222 GO:0019538 GO:0019953 GO:0022402 GO:0022412 GO:0022414 GO:0022622 GO:0023052 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032504 GO:0032870 GO:0035556 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0044703 GO:0048232 GO:0048285 GO:0048316 GO:0048364 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051321 GO:0051704 GO:0051716 GO:0060255 GO:0061458 GO:0065007 GO:0070887 GO:0071310 GO:0071365 GO:0071495 GO:0071704 GO:0071840 GO:0080090 GO:0090058 GO:0099402 GO:0140013 GO:0140096 GO:0140110 GO:1901564 GO:1903046 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

bHLH-MYC_N

Protein Analysis

797

Amino Acids

88.01

Weight (kDa)

4.91

Isoelectric Point (pI)

41.41

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004477)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G64625 AT1G64625 AT1G64625 AT1G64625 AT5G24352 AT5G24352
fragaria_vesca	FvH4_4g16070 FvH4_4g16070 FvH4_4g16070 FvH4_5g11300 FvH4_5g11300 FvH4_5g11300 FvH4_5g11300 FvH4_5g11300
malus_domestica	MD06G1114400.v1.1 MD14G1135600.v1.1
prunus_persica	Prupe.5G127100_v2.0.a1
pyrus_communis	pycom06g10710 pycom14g10880 pycom14g10890
rosa_chinensis	RchiOBHm_Chr7g0186541
rosa_laevigata	RLG00000004836
rosa_multiflora	Rmu_sc0000645.1_g000021
rosa_roxburghii	Rroxscaffold_3G00268060
rosa_rugosa	Rorug06G0475000 Rorug06G0475000
rosa_samantha	Rh7AG066100 Rh7BG082000 Rh7CG081700 Rh7DG082700
rosa_wichuraiana	Rw7G006870 Rw7G007090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	169
AccB1I	GGYRCC	2 cut(s)	327, 1282
AccB7I	CCANNNNNTGG	2 cut(s)	1241, 1352
AccBSI	CCGCTC	1 cut(s)	421
AciI	CCGC	6 cut(s)	176, 261, 421, 746, 1248, 2328
AclWI	GGATC	6 cut(s)	393, 406, 1783, 1785, 1826, 2288
AcoI	YGGCCR	1 cut(s)	2071
AcsI	RAATTY	6 cut(s)	103, 568, 608, 646, 956, 1183
AcuI	CTGAAG	2 cut(s)	447, 2252
AfaI	GTAC	8 cut(s)	523, 706, 715, 1066, 1318, 1426, 1608, 1759
AfiI	CCNNNNNNNGG	7 cut(s)	863, 1241, 1352, 1376, 1485, 1737, 1832
AgeI	ACCGGT	1 cut(s)	234
AgsI	TTSAA	8 cut(s)	290, 374, 514, 863, 1165, 1309, 1566, 2161
AhdI	GACNNNNNGTC	1 cut(s)	1599
AjnI	CCWGG	8 cut(s)	306, 590, 963, 1518, 1584, 1730, 1747, 2068
AjuI	GAANNNNNNNTTGG	2 cut(s)	189, 221
Alw21I	GWGCWC	3 cut(s)	147, 324, 621
Alw26I	GTCTC	1 cut(s)	29
AlwI	GGATC	6 cut(s)	393, 406, 1783, 1785, 1826, 2288
AoxI	GGCC	3 cut(s)	1745, 1769, 2071
ApeKI	GCWGC	3 cut(s)	867, 992, 1685
ApoI	RAATTY	6 cut(s)	103, 568, 608, 646, 956, 1183
AsiGI	ACCGGT	1 cut(s)	234
Asp700I	GAANNNNTTC	1 cut(s)	498
AspLEI	GCGC	1 cut(s)	90
AspS9I	GGNCC	8 cut(s)	181, 594, 1232, 1462, 1770, 1861, 2056, 2250
AsuC2I	CCSGG	1 cut(s)	2138
AsuHPI	GGTGA	5 cut(s)	17, 580, 614, 990, 1106
AvaII	GGWCC	7 cut(s)	181, 594, 1232, 1462, 1861, 2056, 2250
BaeGI	GKGCMC	1 cut(s)	2200
BalI	TGGCCA	1 cut(s)	2073
BamHI	GGATCC	1 cut(s)	398
BanI	GGYRCC	2 cut(s)	327, 1282
BanII	GRGCYC	2 cut(s)	324, 621
BarI	GAAGNNNNNNTAC	2 cut(s)	706, 738
BauI	CACGAG	1 cut(s)	378
BbsI	GAAGAC	2 cut(s)	714, 2255
Bbv12I	GWGCWC	3 cut(s)	147, 324, 621
BbvCI	CCTCAGC	1 cut(s)	1710
BbvI	GCAGC	3 cut(s)	879, 979, 1672
BceAI	ACGGC	1 cut(s)	231
BcgI	CGANNNNNNTGC	2 cut(s)	620, 654
BciT130I	CCWGG	8 cut(s)	308, 592, 965, 1520, 1586, 1732, 1749, 2070
BcnI	CCSGG	1 cut(s)	2138
BcoDI	GTCTC	1 cut(s)	29
BfaI	CTAG	4 cut(s)	258, 1457, 1548, 1677
BfmI	CTRYAG	1 cut(s)	1663
BfoI	RGCGCY	1 cut(s)	91
BfuAI	ACCTGC	1 cut(s)	169
BisI	GCNGC	3 cut(s)	868, 993, 1686
BlpI	GCTNAGC	1 cut(s)	679
BlsI	GCNGC	3 cut(s)	869, 994, 1687
BmcAI	AGTACT	4 cut(s)	715, 1066, 1426, 1759
Bme1390I	CCNGG	9 cut(s)	308, 592, 965, 1520, 1586, 1732, 1749, 2070, 2138
Bme18I	GGWCC	7 cut(s)	181, 594, 1232, 1462, 1861, 2056, 2250
BmeRI	GACNNNNNGTC	1 cut(s)	1599
BmgT120I	GGNCC	8 cut(s)	181, 594, 1232, 1462, 1770, 1861, 2056, 2250
BmiI	GGNNCC	8 cut(s)	329, 400, 596, 1233, 1284, 1357, 1572, 2252
BmrFI	CCNGG	9 cut(s)	308, 592, 965, 1520, 1586, 1732, 1749, 2070, 2138
BmrI	ACTGGG	3 cut(s)	908, 976, 1821
BmsI	GCATC	5 cut(s)	118, 231, 241, 1099, 2079
BmuI	ACTGGG	3 cut(s)	908, 976, 1821
BoxI	GACNNNNGTC	1 cut(s)	2061
BpiI	GAAGAC	2 cut(s)	714, 2255
Bpu10I	CCTNAGC	2 cut(s)	323, 1710
Bpu1102I	GCTNAGC	1 cut(s)	679
BpuEI	CTTGAG	2 cut(s)	62, 2138
BpuMI	CCSGG	1 cut(s)	2138
BsaJI	CCNNGG	9 cut(s)	120, 598, 622, 695, 1370, 1748, 1766, 1773, 2137
BsaWI	WCCGGW	1 cut(s)	234
BsaXI	ACNNNNNCTCC	2 cut(s)	1562, 1592
Bsc4I	CCNNNNNNNGG	7 cut(s)	863, 1241, 1352, 1376, 1485, 1737, 1832
Bse118I	RCCGGY	2 cut(s)	234, 1285
Bse1I	ACTGG	5 cut(s)	914, 982, 1318, 1404, 1827
Bse3DI	GCAATG	1 cut(s)	648
BseBI	CCWGG	8 cut(s)	308, 592, 965, 1520, 1586, 1732, 1749, 2070
BseDI	CCNNGG	9 cut(s)	120, 598, 622, 695, 1370, 1748, 1766, 1773, 2137
BseGI	GGATG	7 cut(s)	246, 316, 442, 976, 1123, 1469, 1821
BseLI	CCNNNNNNNGG	7 cut(s)	863, 1241, 1352, 1376, 1485, 1737, 1832
BseMI	GCAATG	1 cut(s)	648
BseMII	CTCAG	6 cut(s)	309, 337, 693, 708, 1353, 1701
BseNI	ACTGG	5 cut(s)	914, 982, 1318, 1404, 1827
BseRI	GAGGAG	3 cut(s)	396, 1359, 2361
BseSI	GKGCMC	1 cut(s)	2200
BseXI	GCAGC	3 cut(s)	879, 979, 1672
BseYI	CCCAGC	1 cut(s)	11
BsgI	GTGCAG	1 cut(s)	1671
BshFI	GGCC	3 cut(s)	1747, 1771, 2073
BshNI	GGYRCC	2 cut(s)	327, 1282
BshTI	ACCGGT	1 cut(s)	234
BsiHKAI	GWGCWC	3 cut(s)	147, 324, 621
BsiSI	CCGG	3 cut(s)	235, 1286, 2137
BslFI	GGGAC	2 cut(s)	1245, 2236
BslI	CCNNNNNNNGG	7 cut(s)	863, 1241, 1352, 1376, 1485, 1737, 1832
BsmAI	GTCTC	1 cut(s)	29
BsmFI	GGGAC	2 cut(s)	1245, 2236
BsmI	GAATGC	4 cut(s)	244, 895, 1207, 1561
BsnI	GGCC	3 cut(s)	1747, 1771, 2073
Bsp1286I	GDGCHC	4 cut(s)	147, 324, 621, 2200
Bsp143I	GATC	8 cut(s)	398, 529, 973, 1777, 1788, 1818, 1988, 2293
Bsp1720I	GCTNAGC	1 cut(s)	679
Bsp19I	CCATGG	1 cut(s)	120
BspACI	CCGC	6 cut(s)	176, 261, 421, 746, 1248, 2328
BspANI	GGCC	3 cut(s)	1747, 1771, 2073
BspCNI	CTCAG	6 cut(s)	310, 336, 692, 709, 1352, 1702
BspHI	TCATGA	3 cut(s)	781, 1930, 2387
BspLI	GGNNCC	8 cut(s)	329, 400, 596, 1233, 1284, 1357, 1572, 2252
BspMI	ACCTGC	1 cut(s)	169
BspPI	GGATC	6 cut(s)	393, 406, 1783, 1785, 1826, 2288
BspQI	GCTCTTC	3 cut(s)	135, 1398, 1889
BspT107I	GGYRCC	2 cut(s)	327, 1282
BsrBI	CCGCTC	1 cut(s)	421
BsrDI	GCAATG	1 cut(s)	648
BsrFI	RCCGGY	2 cut(s)	234, 1285
BsrI	ACTGG	5 cut(s)	914, 982, 1318, 1404, 1827
BssAI	RCCGGY	2 cut(s)	234, 1285
BssECI	CCNNGG	9 cut(s)	120, 598, 622, 695, 1370, 1748, 1766, 1773, 2137
BssMI	GATC	8 cut(s)	398, 529, 973, 1777, 1788, 1818, 1988, 2293
BssSI	CACGAG	1 cut(s)	378
BssT1I	CCWWGG	5 cut(s)	120, 598, 695, 1766, 1773
Bst2BI	CACGAG	1 cut(s)	378
Bst2UI	CCWGG	8 cut(s)	308, 592, 965, 1520, 1586, 1732, 1749, 2070
Bst4CI	ACNGT	6 cut(s)	167, 1145, 1514, 1601, 1799, 2032
Bst6I	CTCTTC	3 cut(s)	135, 1398, 1889
BstAPI	GCANNNNNTGC	2 cut(s)	901, 1538
BstC8I	GCNNGC	5 cut(s)	1287, 1539, 1543, 1559, 1707
BstDEI	CTNAG	8 cut(s)	318, 323, 679, 717, 847, 1339, 1710, 2060
BstDSI	CCRYGG	1 cut(s)	120
BstENI	CCTNNNNNAGG	2 cut(s)	861, 1374
BstF5I	GGATG	7 cut(s)	246, 316, 442, 976, 1123, 1469, 1821
BstH2I	RGCGCY	1 cut(s)	91
BstHHI	GCGC	1 cut(s)	90
BstKTI	GATC	8 cut(s)	401, 532, 976, 1780, 1791, 1821, 1991, 2296
BstMAI	GTCTC	1 cut(s)	29
BstMBI	GATC	8 cut(s)	398, 529, 973, 1777, 1788, 1818, 1988, 2293
BstMWI	GCNNNNNNNGC	6 cut(s)	848, 901, 1538, 1682, 1842, 1888
BstNI	CCWGG	8 cut(s)	308, 592, 965, 1520, 1586, 1732, 1749, 2070
BstNSI	RCATGY	4 cut(s)	190, 1561, 1882, 2228
BstPAI	GACNNNNGTC	1 cut(s)	2061
BstSCI	CCNGG	9 cut(s)	306, 590, 963, 1518, 1584, 1730, 1747, 2068, 2136
BstSFI	CTRYAG	1 cut(s)	1663
BstSLI	GKGCMC	1 cut(s)	2200
BstV1I	GCAGC	3 cut(s)	879, 979, 1672
BstV2I	GAAGAC	2 cut(s)	714, 2255
BstX2I	RGATCY	2 cut(s)	398, 1788
BstXI	CCANNNNNNTGG	1 cut(s)	191
BstYI	RGATCY	2 cut(s)	398, 1788
BsuRI	GGCC	3 cut(s)	1747, 1771, 2073
BtgI	CCRYGG	1 cut(s)	120
BtsCI	GGATG	7 cut(s)	246, 316, 442, 976, 1123, 1469, 1821
BtsI	GCAGTG	1 cut(s)	162
BtsIMutI	CAGTG	8 cut(s)	162, 921, 989, 1031, 1300, 1311, 1834, 2037
BveI	ACCTGC	1 cut(s)	169
Cac8I	GCNNGC	5 cut(s)	1287, 1539, 1543, 1559, 1707
CciI	TCATGA	3 cut(s)	781, 1930, 2387
CfoI	GCGC	1 cut(s)	90
Cfr10I	RCCGGY	2 cut(s)	234, 1285
Cfr13I	GGNCC	8 cut(s)	181, 594, 1232, 1462, 1770, 1861, 2056, 2250
CsiI	ACCWGGT	1 cut(s)	1518
Csp6I	GTAC	8 cut(s)	522, 705, 714, 1065, 1317, 1425, 1607, 1758
CspAI	ACCGGT	1 cut(s)	234
CspCI	CAANNNNNGTGG	4 cut(s)	1153, 1188, 2268, 2303
CviQI	GTAC	8 cut(s)	522, 705, 714, 1065, 1317, 1425, 1607, 1758
DdeI	CTNAG	8 cut(s)	318, 323, 679, 717, 847, 1339, 1710, 2060
DpnI	GATC	8 cut(s)	400, 531, 975, 1779, 1790, 1820, 1990, 2295
DpnII	GATC	8 cut(s)	398, 529, 973, 1777, 1788, 1818, 1988, 2293
DraI	TTTAAA	3 cut(s)	613, 1413, 1447
DriI	GACNNNNNGTC	1 cut(s)	1599
EaeI	YGGCCR	1 cut(s)	2071
Eam1104I	CTCTTC	3 cut(s)	135, 1398, 1889
Eam1105I	GACNNNNNGTC	1 cut(s)	1599
EarI	CTCTTC	3 cut(s)	135, 1398, 1889
Ecl136II	GAGCTC	2 cut(s)	322, 619
Eco130I	CCWWGG	5 cut(s)	120, 598, 695, 1766, 1773
Eco147I	AGGCCT	1 cut(s)	1747
Eco24I	GRGCYC	2 cut(s)	324, 621
Eco32I	GATATC	1 cut(s)	878
Eco47I	GGWCC	7 cut(s)	181, 594, 1232, 1462, 1861, 2056, 2250
Eco53kI	GAGCTC	2 cut(s)	322, 619
Eco57I	CTGAAG	2 cut(s)	447, 2252
EcoICRI	GAGCTC	2 cut(s)	322, 619
EcoNI	CCTNNNNNAGG	2 cut(s)	861, 1374
EcoO109I	RGGNCCY	2 cut(s)	1462, 2056
EcoRI	GAATTC	2 cut(s)	568, 1183
EcoRII	CCWGG	8 cut(s)	306, 590, 963, 1518, 1584, 1730, 1747, 2068
EcoRV	GATATC	1 cut(s)	878
EcoT14I	CCWWGG	5 cut(s)	120, 598, 695, 1766, 1773
EcoT22I	ATGCAT	3 cut(s)	133, 246, 1563
EcoT38I	GRGCYC	2 cut(s)	324, 621
ErhI	CCWWGG	5 cut(s)	120, 598, 695, 1766, 1773
FaqI	GGGAC	2 cut(s)	1245, 2236
FauI	CCCGC	1 cut(s)	753
Fnu4HI	GCNGC	3 cut(s)	868, 993, 1686
FokI	GGATG	7 cut(s)	253, 323, 449, 983, 1110, 1456, 1808
FriOI	GRGCYC	2 cut(s)	324, 621
Fsp4HI	GCNGC	3 cut(s)	868, 993, 1686
FspBI	CTAG	4 cut(s)	258, 1457, 1548, 1677
GlaI	GCGC	1 cut(s)	89
GluI	GCNGC	3 cut(s)	868, 993, 1686
GsaI	CCCAGC	1 cut(s)	15
HaeII	RGCGCY	1 cut(s)	91
HaeIII	GGCC	3 cut(s)	1747, 1771, 2073
HapII	CCGG	3 cut(s)	235, 1286, 2137
HhaI	GCGC	1 cut(s)	90
Hin6I	GCGC	1 cut(s)	88
HinP1I	GCGC	1 cut(s)	88
HincII	GTYRAC	4 cut(s)	117, 753, 1672, 2354
HindII	GTYRAC	4 cut(s)	117, 753, 1672, 2354
HinfI	GANTC	7 cut(s)	46, 314, 719, 776, 785, 821, 1850
HpaII	CCGG	3 cut(s)	235, 1286, 2137
HphI	GGTGA	5 cut(s)	17, 580, 614, 990, 1106
Hpy166II	GTNNAC	9 cut(s)	117, 184, 753, 1175, 1510, 1672, 2066, 2354, 2366
Hpy8I	GTNNAC	9 cut(s)	117, 184, 753, 1175, 1510, 1672, 2066, 2354, 2366
HpyAV	CCTTC	3 cut(s)	191, 2155, 2264
HpyCH4III	ACNGT	6 cut(s)	167, 1145, 1514, 1601, 1799, 2032
HpyF10VI	GCNNNNNNNGC	6 cut(s)	848, 901, 1538, 1682, 1842, 1888
HpyF3I	CTNAG	8 cut(s)	318, 323, 679, 717, 847, 1339, 1710, 2060
HspAI	GCGC	1 cut(s)	88
KroI	GCCGGC	1 cut(s)	1285
KroNI	GCCGGC	1 cut(s)	1287
Kzo9I	GATC	8 cut(s)	398, 529, 973, 1777, 1788, 1818, 1988, 2293
LguI	GCTCTTC	3 cut(s)	135, 1398, 1889
LmnI	GCTCC	9 cut(s)	152, 259, 418, 624, 1117, 1372, 1442, 1554, 1570
Lsp1109I	GCAGC	3 cut(s)	879, 979, 1672
LweI	GCATC	5 cut(s)	118, 231, 241, 1099, 2079
MabI	ACCWGGT	1 cut(s)	1518
MaeI	CTAG	4 cut(s)	258, 1457, 1548, 1677
MaeIII	GTNAC	4 cut(s)	586, 1514, 1897, 2227
MalI	GATC	8 cut(s)	400, 531, 975, 1779, 1790, 1820, 1990, 2295
MbiI	CCGCTC	1 cut(s)	421
MboI	GATC	8 cut(s)	398, 529, 973, 1777, 1788, 1818, 1988, 2293
MboII	GAAGA	9 cut(s)	152, 330, 714, 1283, 1415, 1876, 2104, 2255, 2258
MfeI	CAATTG	1 cut(s)	354
MflI	RGATCY	2 cut(s)	398, 1788
MhlI	GDGCHC	4 cut(s)	147, 324, 621, 2200
MlsI	TGGCCA	1 cut(s)	2073
MluNI	TGGCCA	1 cut(s)	2073
MlyI	GAGTC	2 cut(s)	55, 728
MmeI	TCCRAC	2 cut(s)	1839, 2321
Mox20I	TGGCCA	1 cut(s)	2073
Mph1103I	ATGCAT	3 cut(s)	133, 246, 1563
MroNI	GCCGGC	1 cut(s)	1285
MroXI	GAANNNNTTC	1 cut(s)	498
MscI	TGGCCA	1 cut(s)	2073
MseI	TTAA	8 cut(s)	554, 612, 924, 1089, 1412, 1446, 1920, 2150
MslI	CAYNNNNRTG	1 cut(s)	249
Msp20I	TGGCCA	1 cut(s)	2073
MspA1I	CMGCKG	2 cut(s)	683, 870
MspI	CCGG	3 cut(s)	235, 1286, 2137
MspR9I	CCNGG	9 cut(s)	308, 592, 965, 1520, 1586, 1732, 1749, 2070, 2138
MunI	CAATTG	1 cut(s)	354
Mva1269I	GAATGC	4 cut(s)	244, 895, 1207, 1561
MvaI	CCWGG	8 cut(s)	308, 592, 965, 1520, 1586, 1732, 1749, 2070
MwoI	GCNNNNNNNGC	6 cut(s)	848, 901, 1538, 1682, 1842, 1888
NaeI	GCCGGC	1 cut(s)	1287
NciI	CCSGG	1 cut(s)	2138
NcoI	CCATGG	1 cut(s)	120
NdeII	GATC	8 cut(s)	398, 529, 973, 1777, 1788, 1818, 1988, 2293
NgoMIV	GCCGGC	1 cut(s)	1285
NlaIV	GGNNCC	8 cut(s)	329, 400, 596, 1233, 1284, 1357, 1572, 2252
NmuCI	GTSAC	2 cut(s)	586, 1897
NsiI	ATGCAT	3 cut(s)	133, 246, 1563
NspI	RCATGY	4 cut(s)	190, 1561, 1882, 2228
PaeI	GCATGC	1 cut(s)	1561
PagI	TCATGA	3 cut(s)	781, 1930, 2387
PceI	AGGCCT	1 cut(s)	1747
PciSI	GCTCTTC	3 cut(s)	135, 1398, 1889
PctI	GAATGC	4 cut(s)	244, 895, 1207, 1561
PdiI	GCCGGC	1 cut(s)	1287
PdmI	GAANNNNTTC	1 cut(s)	498
PfeI	GAWTC	5 cut(s)	314, 776, 785, 821, 1850
PflMI	CCANNNNNTGG	2 cut(s)	1241, 1352
PfoI	TCCNGGA	1 cut(s)	306
PinAI	ACCGGT	1 cut(s)	234
PkrI	GCNGC	3 cut(s)	869, 994, 1687
PleI	GAGTC	2 cut(s)	54, 727
PpsI	GAGTC	2 cut(s)	54, 727
PpuMI	RGGWCCY	2 cut(s)	1462, 2056
PshAI	GACNNNNGTC	1 cut(s)	2061
Psp124BI	GAGCTC	2 cut(s)	324, 621
Psp5II	RGGWCCY	2 cut(s)	1462, 2056
Psp6I	CCWGG	8 cut(s)	306, 590, 963, 1518, 1584, 1730, 1747, 2068
PspFI	CCCAGC	1 cut(s)	11
PspGI	CCWGG	8 cut(s)	306, 590, 963, 1518, 1584, 1730, 1747, 2068
PspN4I	GGNNCC	8 cut(s)	329, 400, 596, 1233, 1284, 1357, 1572, 2252
PspPI	GGNCC	8 cut(s)	181, 594, 1232, 1462, 1770, 1861, 2056, 2250
PspPPI	RGGWCCY	2 cut(s)	1462, 2056
PsuI	RGATCY	2 cut(s)	398, 1788
PvuII	CAGCTG	2 cut(s)	683, 870
RsaI	GTAC	8 cut(s)	523, 706, 715, 1066, 1318, 1426, 1608, 1759
RsaNI	GTAC	8 cut(s)	522, 705, 714, 1065, 1317, 1425, 1607, 1758
RseI	CAYNNNNRTG	1 cut(s)	249
SacI	GAGCTC	2 cut(s)	324, 621
SapI	GCTCTTC	3 cut(s)	135, 1398, 1889
SaqAI	TTAA	8 cut(s)	554, 612, 924, 1089, 1412, 1446, 1920, 2150
SatI	GCNGC	3 cut(s)	868, 993, 1686
Sau3AI	GATC	8 cut(s)	398, 529, 973, 1777, 1788, 1818, 1988, 2293
Sau96I	GGNCC	8 cut(s)	181, 594, 1232, 1462, 1770, 1861, 2056, 2250
ScaI	AGTACT	4 cut(s)	715, 1066, 1426, 1759
SchI	GAGTC	2 cut(s)	55, 728
ScrFI	CCNGG	9 cut(s)	308, 592, 965, 1520, 1586, 1732, 1749, 2070, 2138
SduI	GDGCHC	4 cut(s)	147, 324, 621, 2200
SexAI	ACCWGGT	1 cut(s)	1518
SfaNI	GCATC	5 cut(s)	118, 231, 241, 1099, 2079
SfcI	CTRYAG	1 cut(s)	1663
SgrAI	CRCCGGYG	1 cut(s)	234
SinI	GGWCC	7 cut(s)	181, 594, 1232, 1462, 1861, 2056, 2250
SmiMI	CAYNNNNRTG	1 cut(s)	249
SmlI	CTYRAG	2 cut(s)	41, 2117
SmoI	CTYRAG	2 cut(s)	41, 2117
SphI	GCATGC	1 cut(s)	1561
SseBI	AGGCCT	1 cut(s)	1747
SsiI	CCGC	6 cut(s)	176, 261, 421, 746, 1248, 2328
SspI	AATATT	2 cut(s)	811, 2155
SspMI	CTAG	4 cut(s)	258, 1457, 1548, 1677
SstI	GAGCTC	2 cut(s)	324, 621
StuI	AGGCCT	1 cut(s)	1747
StyD4I	CCNGG	9 cut(s)	306, 590, 963, 1518, 1584, 1730, 1747, 2068, 2136
StyI	CCWWGG	5 cut(s)	120, 598, 695, 1766, 1773
TaaI	ACNGT	6 cut(s)	167, 1145, 1514, 1601, 1799, 2032
TaqI	TCGA	5 cut(s)	741, 1119, 1762, 2019, 2179
TaqII	GACCGA	1 cut(s)	1878
TatI	WGTACW	5 cut(s)	704, 713, 1064, 1424, 1757
TfiI	GAWTC	5 cut(s)	314, 776, 785, 821, 1850
Tru1I	TTAA	8 cut(s)	554, 612, 924, 1089, 1412, 1446, 1920, 2150
Tru9I	TTAA	8 cut(s)	554, 612, 924, 1089, 1412, 1446, 1920, 2150
TscAI	CASTG	8 cut(s)	162, 921, 989, 1038, 1300, 1318, 1834, 2037
TseFI	GTSAC	2 cut(s)	586, 1897
TseI	GCWGC	3 cut(s)	867, 992, 1685
Tsp45I	GTSAC	2 cut(s)	586, 1897
TspGWI	ACGGA	3 cut(s)	1429, 1583, 2249
TspRI	CASTG	8 cut(s)	162, 921, 989, 1038, 1300, 1318, 1834, 2037
Van91I	CCANNNNNTGG	2 cut(s)	1241, 1352
VpaK11BI	GGWCC	7 cut(s)	181, 594, 1232, 1462, 1861, 2056, 2250
XagI	CCTNNNNNAGG	2 cut(s)	861, 1374
XapI	RAATTY	6 cut(s)	103, 568, 608, 646, 956, 1183
XbaI	TCTAGA	1 cut(s)	1456
XceI	RCATGY	4 cut(s)	190, 1561, 1882, 2228
XcmI	CCANNNNNNNNNTGG	2 cut(s)	338, 412
XmnI	GAANNNNTTC	1 cut(s)	498
XspI	CTAG	4 cut(s)	258, 1457, 1548, 1677
ZrmI	AGTACT	4 cut(s)	715, 1066, 1426, 1759
Zsp2I	ATGCAT	3 cut(s)	133, 246, 1563

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.