Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr06

Orthogroup ID

OG0004477

Physical Location & Seq

Genomic Coordinates Forward (+)

25379624 .. 25383886

Gene Structure 4263 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD06G1114400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2373 bp

ATGGGTGAAAGTTCAGTGGTGAGAGAGAGGCTGAGGAGTCTCTGTGTTGGCAATGGGTGGTCTTATGGGGTTTTCTGGCGCTTTGATCACATAAATTCCATGTTGTTGACAATGGGAGATGCCTACTATGAAGACCATGTGGGAGCAGTGATTGAAACTATGCTTTCCCAGGTCCACATACTTGGTGAAGGTGTTATTGGGCAAACCGCTTTCACCGGAAAGCATCAATGGATGCATTCAGATGTTCATGGTGGAGGATGGAATCCATGTACTTCTCTTGAAAGTCAAGATATGTTTCAGGATTGTTCTGAGTTCGGTTGCCAATTTTCCTCCGGTATAAAGACAATTGCAACAATCTCTGTTGAACCACAAGGAGTAATTCAGTTAGGATCCACCGAAAAGATTATGGAGAGGCTGGAAGTTGTGGATGAAACAAAGAGGTTGTTCCAGGAGGTGGAAAATCTTGACGGGCTTATTCCCTTGGAAAATGCTCCTTCATCGATGAACAATGAAACTAATGATCTAAATGAGTTGTTTGCTTCATTGATTTCACCTGAGAATTCCAACAATGGAGATGTTGCCTTGAATCCCGGTGATAAATGTAATGCCCACCGAGGAAATATTATTTCTGCAGTGGGTTTTCAATCTACATCATCTGATGATATTGGCGCAACTGATACAACCCCCTGGTTTAGTACTTGGTGTACTGAATCTTCAATTTTGACTTCATTCGAACCGCAGTTGGCATCTGAAATTATTCACGAGTCTTGCAGAGAGACAGTGCGGAATATTCAGATGGACTCGGCATTCACTTCATTAGCTGACTTCGAGAAACCTATTCAAGGAAGTTGTGGATATCAGATGAACAACCAACAATCTCTGCATGGATTTCCGGTGGAGTTTAACCCAGCTGATTTGAGTACAGATCTCTCTAAACTATACCAGTTGGATGATCTTTCCCAGTGGTTTGCTACTTCACCGGAACAGAACTTCAATGCAATGGCAACCGCACTGAACGGTGACTTCTCACAAGTAAAAGAAAGTACTTCAGTGTTGTCTAGTCTGGTTAAAGGTGATAACTTTGTTGATGTTCCAATTCAACATCCAGCTAACTCCATTCAAAGTTCCATTACAAATCCATTTAGCGCTGATGGACACGAGAAATCTGTGATCATTCAGAGTGTTGAAAACGGTTCATTTGATGGTTTGGGAGCGGATTTTGCATGTGGTCAAGTCGGGAAGTGTTGGGAAGATACTATAATGCCAGATGTCAATGGTGGCTACTTGGCTACTGGTACTGCTTTGACAAAATGCTTCTCAGAGTCGGAAATAACAGGTTCTATGCCTGGTCCTCGTACAGGGTTGTTCTCAAAGTTAGGACTCGAAGAGATTTTAAATGGTAAAAGTACTACTTCTAGCTCCTTAAAGTGCACTTTAGAGGACCAGTCATCCACCACAAGAAAAAGGAAATCAGAATGTTTATCTGTGAATAGCAATCAGGTTCAATTGCCAAGGCTTGCTGGCTTGGATAGGAGCACGCCTTTGGCGAATTCTTTCTACAACCTGGACAATACAGACAGACTTGCTCCAAAGAAAGACTTTATCCCAAAATCACAGGTAGGCTTATGGATTGATGATAGCTATAGCGTCAACGCTAAAAATGGGGTTCAAGATAAACAACAGAAAGCTGAGGAACACACAAAGAACACCAGGAAAAGGGCAAGGCCTGGGGAGAGTACTCGACCTAGACCTAAGGATCGCCAGCAGATTCAAGACCGTATCAAAGAGTTGAGAGGGATCATCCCTACCGGTGGCAAGTGTAGCATCGATTCTTTGTTGGACCGGACAATCAAATACATGGTCTTCTTGCAAAACGTGATGAAATACGCAGATAAGCTTAAACAGACTCATGAGCCAAAGCTGATTGGCAAGGAGAATGGAGTGGTTCTAAAAGACAATGGCACCAAATGTGGTGGTAATACATGGGCATTAGCAGTTGAGGGTCAAACAGTGGTTTGCCCTATAATAGTCGAGGACCTTGATCAGCCAGGCCAAATGCTTATCGAGATGCTTTGTGAGGAACAAGGTTTCTTTCTTGAGATAGCAGACATAATCCGCGGCTTTGGGTTAAATATCTTGAAGGGGGTGATTGAAAGTCGTGAAGATAAGATATGGGCAAGATTTATCGTTGAGGCAACTAGGCATGTAACAAGGCTAGATGTGTTCTGGTCCCTTGTCCGGCTTCTACAACAAACAACTACGGGTGTGGTTGATCCAACTAATCGGCTAAGTAATGTAGTAGATAGTGGGGTTCCTCCTCTATTGGATAGTTGTCAGCAACAAAGCTTGCCGCCTCCGGTCAGTTTGATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000280 GO:0003006 GO:0003674 GO:0003700 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006355 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006996 GO:0007049 GO:0007140 GO:0007154 GO:0007165 GO:0007275 GO:0007276 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009733 GO:0009791 GO:0009888 GO:0009889 GO:0009987 GO:0010033 GO:0010087 GO:0010089 GO:0010154 GO:0010468 GO:0010556 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019219 GO:0019222 GO:0019538 GO:0019953 GO:0022402 GO:0022412 GO:0022414 GO:0022622 GO:0023052 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032504 GO:0032870 GO:0035556 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0044703 GO:0048232 GO:0048285 GO:0048316 GO:0048364 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051321 GO:0051704 GO:0051716 GO:0060255 GO:0061458 GO:0065007 GO:0070887 GO:0071310 GO:0071365 GO:0071495 GO:0071704 GO:0071840 GO:0080090 GO:0090058 GO:0099402 GO:0140013 GO:0140096 GO:0140110 GO:1901564 GO:1903046 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

bHLH-MYC_N

Protein Analysis

791

Amino Acids

86.98

Weight (kDa)

4.91

Isoelectric Point (pI)

41.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
bHLH-MYC_N	PF14215	8 - 45	2e-07	bHLH-MYC and R2R3-MYB transcription factors N-terminal
bHLH-MYC_N	PF14215	54 - 149	1.2e-17	bHLH-MYC and R2R3-MYB transcription factors N-terminal
bHLH_LHW	PF23176	581 - 639	4.4e-28	Transcription factor LHW bHLH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0004477)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G64625 AT1G64625 AT1G64625 AT1G64625 AT5G24352 AT5G24352
fragaria_vesca	FvH4_4g16070 FvH4_4g16070 FvH4_4g16070 FvH4_5g11300 FvH4_5g11300 FvH4_5g11300 FvH4_5g11300 FvH4_5g11300
malus_domestica	MD06G1114400.v1.1 MD14G1135600.v1.1
prunus_persica	Prupe.5G127100_v2.0.a1
pyrus_communis	pycom06g10710 pycom14g10880 pycom14g10890
rosa_chinensis	RchiOBHm_Chr7g0186541
rosa_laevigata	RLG00000004836
rosa_multiflora	Rmu_sc0000645.1_g000021
rosa_roxburghii	Rroxscaffold_3G00268060
rosa_rugosa	Rorug06G0475000 Rorug06G0475000
rosa_samantha	Rh7AG066100 Rh7BG082000 Rh7CG081700 Rh7DG082700
rosa_wichuraiana	Rw7G006870 Rw7G007090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1961
AccB7I	CCANNNNNTGG	1 cut(s)	454
AccBSI	CCGCTC	1 cut(s)	1214
AccII	CGCG	1 cut(s)	2118
AciI	CCGC	8 cut(s)	207, 737, 784, 1008, 1214, 2116, 2118, 2351
AclWI	GGATC	5 cut(s)	384, 397, 1764, 1805, 2267
AcsI	RAATTY	3 cut(s)	94, 559, 1549
AcuI	CTGAAG	1 cut(s)	1032
AfaI	GTAC	9 cut(s)	271, 697, 706, 922, 1045, 1297, 1357, 1408, 1738
AfeI	AGCGCT	1 cut(s)	1147
AfiI	CCNNNNNNNGG	6 cut(s)	454, 842, 1358, 1716, 1811, 2238
AgeI	ACCGGT	1 cut(s)	1808
AjnI	CCWGG	8 cut(s)	168, 447, 686, 1345, 1563, 1709, 1726, 2047
AjuI	GAANNNNNNNTTGG	2 cut(s)	180, 212
AluBI	AGCT	9 cut(s)	821, 911, 1109, 1419, 1641, 1688, 1897, 1921, 2346
AluI	AGCT	9 cut(s)	821, 911, 1109, 1419, 1641, 1688, 1897, 1921, 2346
Alw21I	GWGCWC	2 cut(s)	1433, 1538
Alw26I	GTCTC	2 cut(s)	44, 770
Alw44I	GTGCAC	1 cut(s)	1429
AlwI	GGATC	5 cut(s)	384, 397, 1764, 1805, 2267
Aor51HI	AGCGCT	1 cut(s)	1147
AoxI	GGCC	2 cut(s)	1724, 2050
ApaLI	GTGCAC	1 cut(s)	1429
ApoI	RAATTY	3 cut(s)	94, 559, 1549
ArsI	GACNNNNNNTTYG	2 cut(s)	1845, 1877
AsiGI	ACCGGT	1 cut(s)	1808
Asp700I	GAANNNNTTC	2 cut(s)	756, 1553
AspLEI	GCGC	3 cut(s)	81, 671, 1148
AspS9I	GGNCC	6 cut(s)	172, 1349, 1441, 1840, 2035, 2229
AsuC2I	CCSGG	1 cut(s)	591
AsuII	TTCGAA	1 cut(s)	732
AvaII	GGWCC	6 cut(s)	172, 1349, 1441, 1840, 2035, 2229
AxyI	CCTNAGG	1 cut(s)	1752
BaeGI	GKGCMC	1 cut(s)	1433
BamHI	GGATCC	1 cut(s)	389
BanI	GGYRCC	1 cut(s)	1961
BarI	GAAGNNNNNNTAC	2 cut(s)	697, 729
BauI	CACGAG	2 cut(s)	761, 1157
BbsI	GAAGAC	2 cut(s)	138, 1855
Bbv12I	GWGCWC	2 cut(s)	1433, 1538
BbvCI	CCTCAGC	2 cut(s)	32, 1689
BccI	CCATC	4 cut(s)	252, 790, 1145, 1196
BciT130I	CCWGG	8 cut(s)	170, 449, 688, 1347, 1565, 1711, 1728, 2049
BclI	TGATCA	3 cut(s)	85, 1170, 2041
BcnI	CCSGG	1 cut(s)	591
BcoDI	GTCTC	2 cut(s)	44, 770
BfaI	CTAG	5 cut(s)	1059, 1416, 1746, 2199, 2216
BfmI	CTRYAG	2 cut(s)	630, 1642
BfoI	RGCGCY	2 cut(s)	82, 1149
BglII	AGATCT	1 cut(s)	925
BisI	GCNGC	2 cut(s)	2119, 2351
BlsI	GCNGC	2 cut(s)	2120, 2352
BmcAI	AGTACT	4 cut(s)	697, 1045, 1408, 1738
Bme1390I	CCNGG	9 cut(s)	170, 449, 591, 688, 1347, 1565, 1711, 1728, 2049
Bme18I	GGWCC	6 cut(s)	172, 1349, 1441, 1840, 2035, 2229
BmgT120I	GGNCC	6 cut(s)	172, 1349, 1441, 1840, 2035, 2229
BmiI	GGNNCC	4 cut(s)	391, 1963, 2231, 2313
BmrFI	CCNGG	9 cut(s)	170, 449, 591, 688, 1347, 1565, 1711, 1728, 2049
BmrI	ACTGGG	1 cut(s)	955
BmsI	GCATC	6 cut(s)	109, 222, 232, 755, 1833, 2058
BmuI	ACTGGG	1 cut(s)	955
BpiI	GAAGAC	2 cut(s)	138, 1855
Bpu10I	CCTNAGC	2 cut(s)	32, 1689
Bpu14I	TTCGAA	1 cut(s)	732
BpuEI	CTTGAG	1 cut(s)	2117
BpuMI	CCSGG	1 cut(s)	591
Bsa29I	ATCGAT	2 cut(s)	500, 1827
BsaJI	CCNNGG	7 cut(s)	168, 480, 613, 686, 1511, 1727, 2116
BsaWI	WCCGGW	7 cut(s)	215, 332, 892, 979, 1808, 1842, 2356
BsaXI	ACNNNNNCTCC	2 cut(s)	28, 58
Bsc4I	CCNNNNNNNGG	6 cut(s)	454, 842, 1358, 1716, 1811, 2238
Bse118I	RCCGGY	1 cut(s)	1808
Bse1I	ACTGG	4 cut(s)	943, 961, 1297, 1444
Bse21I	CCTNAGG	1 cut(s)	1752
Bse3DI	GCAATG	2 cut(s)	58, 1005
BseBI	CCWGG	8 cut(s)	170, 449, 688, 1347, 1565, 1711, 1728, 2049
BseCI	ATCGAT	2 cut(s)	500, 1827
BseDI	CCNNGG	7 cut(s)	168, 480, 613, 686, 1511, 1727, 2116
BseGI	GGATG	7 cut(s)	237, 263, 433, 955, 1102, 1448, 1800
BseLI	CCNNNNNNNGG	6 cut(s)	454, 842, 1358, 1716, 1811, 2238
BseMI	GCAATG	2 cut(s)	58, 1005
BseMII	CTCAG	5 cut(s)	23, 300, 546, 1332, 1680
BseNI	ACTGG	4 cut(s)	943, 961, 1297, 1444
BseRI	GAGGAG	2 cut(s)	49, 2307
BseSI	GKGCMC	1 cut(s)	1433
BseYI	CCCAGC	1 cut(s)	907
Bsh1236I	CGCG	1 cut(s)	2118
BshFI	GGCC	2 cut(s)	1726, 2052
BshNI	GGYRCC	1 cut(s)	1961
BshTI	ACCGGT	1 cut(s)	1808
BshVI	ATCGAT	2 cut(s)	500, 1827
BsiHKAI	GWGCWC	2 cut(s)	1433, 1538
BsiSI	CCGG	9 cut(s)	216, 333, 591, 893, 980, 1809, 1843, 2239, 2357
BslFI	GGGAC	1 cut(s)	2215
BslI	CCNNNNNNNGG	6 cut(s)	454, 842, 1358, 1716, 1811, 2238
BsmAI	GTCTC	2 cut(s)	44, 770
BsmFI	GGGAC	1 cut(s)	2215
BsmI	GAATGC	2 cut(s)	235, 806
BsnI	GGCC	2 cut(s)	1726, 2052
Bsp119I	TTCGAA	1 cut(s)	732
Bsp1286I	GDGCHC	2 cut(s)	1433, 1538
BspACI	CCGC	8 cut(s)	207, 737, 784, 1008, 1214, 2116, 2118, 2351
BspANI	GGCC	2 cut(s)	1726, 2052
BspCNI	CTCAG	5 cut(s)	24, 301, 547, 1331, 1681
BspDI	ATCGAT	2 cut(s)	500, 1827
BspFNI	CGCG	1 cut(s)	2118
BspHI	TCATGA	1 cut(s)	1909
BspLI	GGNNCC	4 cut(s)	391, 1963, 2231, 2313
BspMAI	CTGCAG	1 cut(s)	634
BspPI	GGATC	5 cut(s)	384, 397, 1764, 1805, 2267
BspT104I	TTCGAA	1 cut(s)	732
BspT107I	GGYRCC	1 cut(s)	1961
BsrBI	CCGCTC	1 cut(s)	1214
BsrDI	GCAATG	2 cut(s)	58, 1005
BsrFI	RCCGGY	1 cut(s)	1808
BsrI	ACTGG	4 cut(s)	943, 961, 1297, 1444
BssAI	RCCGGY	1 cut(s)	1808
BssECI	CCNNGG	7 cut(s)	168, 480, 613, 686, 1511, 1727, 2116
BssSI	CACGAG	2 cut(s)	761, 1157
BssT1I	CCWWGG	2 cut(s)	480, 1511
Bst2BI	CACGAG	2 cut(s)	761, 1157
Bst2UI	CCWGG	8 cut(s)	170, 449, 688, 1347, 1565, 1711, 1728, 2049
Bst4CI	ACNGT	5 cut(s)	781, 1019, 1193, 1778, 2011
Bst6I	CTCTTC	1 cut(s)	1380
BstBI	TTCGAA	1 cut(s)	732
BstC8I	GCNNGC	5 cut(s)	1518, 1522, 1538, 1763, 2348
BstDEI	CTNAG	7 cut(s)	32, 309, 555, 1318, 1689, 1752, 2288
BstDSI	CCRYGG	1 cut(s)	2116
BstENI	CCTNNNNNAGG	2 cut(s)	840, 1356
BstF5I	GGATG	7 cut(s)	237, 263, 433, 955, 1102, 1448, 1800
BstFNI	CGCG	1 cut(s)	2118
BstH2I	RGCGCY	2 cut(s)	82, 1149
BstHHI	GCGC	3 cut(s)	81, 671, 1148
BstMAI	GTCTC	2 cut(s)	44, 770
BstMWI	GCNNNNNNNGC	2 cut(s)	1220, 1821
BstNI	CCWGG	8 cut(s)	170, 449, 688, 1347, 1565, 1711, 1728, 2049
BstNSI	RCATGY	2 cut(s)	1227, 2207
BstSCI	CCNGG	9 cut(s)	168, 447, 589, 686, 1345, 1563, 1709, 1726, 2047
BstSFI	CTRYAG	2 cut(s)	630, 1642
BstSLI	GKGCMC	1 cut(s)	1433
BstUI	CGCG	1 cut(s)	2118
BstV2I	GAAGAC	2 cut(s)	138, 1855
BstX2I	RGATCY	2 cut(s)	389, 925
BstXI	CCANNNNNNTGG	1 cut(s)	182
BstYI	RGATCY	2 cut(s)	389, 925
Bsu15I	ATCGAT	2 cut(s)	500, 1827
Bsu36I	CCTNAGG	1 cut(s)	1752
BsuRI	GGCC	2 cut(s)	1726, 2052
BsuTUI	ATCGAT	2 cut(s)	500, 1827
BtgI	CCRYGG	1 cut(s)	2116
BtsCI	GGATG	7 cut(s)	237, 263, 433, 955, 1102, 1448, 1800
BtsI	GCAGTG	2 cut(s)	153, 639
BtsIMutI	CAGTG	8 cut(s)	21, 153, 639, 786, 968, 1010, 1056, 2016
Cac8I	GCNNGC	5 cut(s)	1518, 1522, 1538, 1763, 2348
CciI	TCATGA	1 cut(s)	1909
CfoI	GCGC	3 cut(s)	81, 671, 1148
Cfr10I	RCCGGY	1 cut(s)	1808
Cfr13I	GGNCC	6 cut(s)	172, 1349, 1441, 1840, 2035, 2229
Cfr42I	CCGCGG	1 cut(s)	2119
ClaI	ATCGAT	2 cut(s)	500, 1827
CseI	GACGC	1 cut(s)	1636
Csp6I	GTAC	9 cut(s)	270, 696, 705, 921, 1044, 1296, 1356, 1407, 1737
CspAI	ACCGGT	1 cut(s)	1808
CspCI	CAANNNNNGTGG	2 cut(s)	1954, 1989
CviQI	GTAC	9 cut(s)	270, 696, 705, 921, 1044, 1296, 1356, 1407, 1737
DdeI	CTNAG	7 cut(s)	32, 309, 555, 1318, 1689, 1752, 2288
DraI	TTTAAA	1 cut(s)	1395
Eam1104I	CTCTTC	1 cut(s)	1380
EarI	CTCTTC	1 cut(s)	1380
Eco130I	CCWWGG	2 cut(s)	480, 1511
Eco147I	AGGCCT	1 cut(s)	1726
Eco32I	GATATC	1 cut(s)	857
Eco47I	GGWCC	6 cut(s)	172, 1349, 1441, 1840, 2035, 2229
Eco47III	AGCGCT	1 cut(s)	1147
Eco57I	CTGAAG	1 cut(s)	1032
Eco81I	CCTNAGG	1 cut(s)	1752
EcoNI	CCTNNNNNAGG	2 cut(s)	840, 1356
EcoO109I	RGGNCCY	1 cut(s)	2035
EcoRI	GAATTC	2 cut(s)	559, 1549
EcoRII	CCWGG	8 cut(s)	168, 447, 686, 1345, 1563, 1709, 1726, 2047
EcoRV	GATATC	1 cut(s)	857
EcoT14I	CCWWGG	2 cut(s)	480, 1511
EcoT22I	ATGCAT	1 cut(s)	237
ErhI	CCWWGG	2 cut(s)	480, 1511
FalI	AAGNNNNNCTT	4 cut(s)	1396, 1428, 1583, 1615
FaqI	GGGAC	1 cut(s)	2215
FbaI	TGATCA	3 cut(s)	85, 1170, 2041
Fnu4HI	GCNGC	2 cut(s)	2119, 2351
FokI	GGATG	7 cut(s)	244, 270, 440, 962, 1089, 1435, 1787
Fsp4HI	GCNGC	2 cut(s)	2119, 2351
FspBI	CTAG	5 cut(s)	1059, 1416, 1746, 2199, 2216
GlaI	GCGC	3 cut(s)	80, 670, 1147
GluI	GCNGC	2 cut(s)	2119, 2351
GsaI	CCCAGC	1 cut(s)	911
HaeII	RGCGCY	2 cut(s)	82, 1149
HaeIII	GGCC	2 cut(s)	1726, 2052
HapII	CCGG	9 cut(s)	216, 333, 591, 893, 980, 1809, 1843, 2239, 2357
HgaI	GACGC	1 cut(s)	1636
HhaI	GCGC	3 cut(s)	81, 671, 1148
Hin6I	GCGC	3 cut(s)	79, 669, 1146
HinP1I	GCGC	3 cut(s)	79, 669, 1146
HincII	GTYRAC	2 cut(s)	108, 1651
HindII	GTYRAC	2 cut(s)	108, 1651
HindIII	AAGCTT	2 cut(s)	1895, 2344
HpaII	CCGG	9 cut(s)	216, 333, 591, 893, 980, 1809, 1843, 2239, 2357
Hpy166II	GTNNAC	5 cut(s)	108, 175, 705, 1431, 1651
Hpy8I	GTNNAC	5 cut(s)	108, 175, 705, 1431, 1651
HpyAV	CCTTC	3 cut(s)	182, 504, 2134
HpyCH4III	ACNGT	5 cut(s)	781, 1019, 1193, 1778, 2011
HpyCH4IV	ACGT	1 cut(s)	1875
HpyCH4V	TGCA	9 cut(s)	235, 350, 632, 771, 883, 998, 1223, 1431, 1870
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1220, 1821
HpyF3I	CTNAG	7 cut(s)	32, 309, 555, 1318, 1689, 1752, 2288
HpySE526I	ACGT	1 cut(s)	1875
HspAI	GCGC	3 cut(s)	79, 669, 1146
Ksp22I	TGATCA	3 cut(s)	85, 1170, 2041
KspI	CCGCGG	1 cut(s)	2119
LmnI	GCTCC	6 cut(s)	143, 496, 1211, 1424, 1533, 1591
LweI	GCATC	6 cut(s)	109, 222, 232, 755, 1833, 2058
MaeI	CTAG	5 cut(s)	1059, 1416, 1746, 2199, 2216
MaeII	ACGT	1 cut(s)	1875
MaeIII	GTNAC	2 cut(s)	1019, 2206
MbiI	CCGCTC	1 cut(s)	1214
MboII	GAAGA	6 cut(s)	143, 705, 1262, 1397, 1855, 2174
MfeI	CAATTG	2 cut(s)	345, 1505
MflI	RGATCY	2 cut(s)	389, 925
MhlI	GDGCHC	2 cut(s)	1433, 1538
MlyI	GAGTC	6 cut(s)	46, 773, 794, 1331, 1374, 1900
MmeI	TCCRAC	5 cut(s)	588, 927, 1305, 1818, 2300
Mph1103I	ATGCAT	1 cut(s)	237
MroXI	GAANNNNTTC	2 cut(s)	756, 1553
MseI	TTAA	6 cut(s)	903, 1068, 1394, 1424, 1899, 2129
MslI	CAYNNNNRTG	1 cut(s)	240
MspA1I	CMGCKG	2 cut(s)	911, 2118
MspI	CCGG	9 cut(s)	216, 333, 591, 893, 980, 1809, 1843, 2239, 2357
MspR9I	CCNGG	9 cut(s)	170, 449, 591, 688, 1347, 1565, 1711, 1728, 2049
MunI	CAATTG	2 cut(s)	345, 1505
Mva1269I	GAATGC	2 cut(s)	235, 806
MvaI	CCWGG	8 cut(s)	170, 449, 688, 1347, 1565, 1711, 1728, 2049
MvnI	CGCG	1 cut(s)	2118
MwoI	GCNNNNNNNGC	2 cut(s)	1220, 1821
NciI	CCSGG	1 cut(s)	591
NlaIV	GGNNCC	4 cut(s)	391, 1963, 2231, 2313
NmeAIII	GCCGAG	1 cut(s)	782
NmuCI	GTSAC	1 cut(s)	1019
NsiI	ATGCAT	1 cut(s)	237
NspI	RCATGY	2 cut(s)	1227, 2207
NspV	TTCGAA	1 cut(s)	732
PagI	TCATGA	1 cut(s)	1909
PceI	AGGCCT	1 cut(s)	1726
PcsI	WCGNNNNNNNCGW	1 cut(s)	1544
PctI	GAATGC	2 cut(s)	235, 806
PdmI	GAANNNNTTC	2 cut(s)	756, 1553
PfeI	GAWTC	5 cut(s)	262, 586, 710, 1768, 1829
PflMI	CCANNNNNTGG	1 cut(s)	454
PfoI	TCCNGGA	1 cut(s)	447
PinAI	ACCGGT	1 cut(s)	1808
PkrI	GCNGC	2 cut(s)	2120, 2352
PleI	GAGTC	6 cut(s)	45, 772, 794, 1330, 1374, 1900
PpsI	GAGTC	6 cut(s)	45, 772, 794, 1330, 1374, 1900
PpuMI	RGGWCCY	1 cut(s)	2035
Psp5II	RGGWCCY	1 cut(s)	2035
Psp6I	CCWGG	8 cut(s)	168, 447, 686, 1345, 1563, 1709, 1726, 2047
PspFI	CCCAGC	1 cut(s)	907
PspGI	CCWGG	8 cut(s)	168, 447, 686, 1345, 1563, 1709, 1726, 2047
PspN4I	GGNNCC	4 cut(s)	391, 1963, 2231, 2313
PspPI	GGNCC	6 cut(s)	172, 1349, 1441, 1840, 2035, 2229
PspPPI	RGGWCCY	1 cut(s)	2035
PstI	CTGCAG	1 cut(s)	634
PsuI	RGATCY	2 cut(s)	389, 925
PvuII	CAGCTG	1 cut(s)	911
RsaI	GTAC	9 cut(s)	271, 697, 706, 922, 1045, 1297, 1357, 1408, 1738
RsaNI	GTAC	9 cut(s)	270, 696, 705, 921, 1044, 1296, 1356, 1407, 1737
RseI	CAYNNNNRTG	1 cut(s)	240
SacII	CCGCGG	1 cut(s)	2119
SaqAI	TTAA	6 cut(s)	903, 1068, 1394, 1424, 1899, 2129
SatI	GCNGC	2 cut(s)	2119, 2351
Sau96I	GGNCC	6 cut(s)	172, 1349, 1441, 1840, 2035, 2229
ScaI	AGTACT	4 cut(s)	697, 1045, 1408, 1738
SchI	GAGTC	6 cut(s)	46, 773, 794, 1331, 1374, 1900
ScrFI	CCNGG	9 cut(s)	170, 449, 591, 688, 1347, 1565, 1711, 1728, 2049
SduI	GDGCHC	2 cut(s)	1433, 1538
SfaNI	GCATC	6 cut(s)	109, 222, 232, 755, 1833, 2058
SfcI	CTRYAG	2 cut(s)	630, 1642
Sfr303I	CCGCGG	1 cut(s)	2119
SfuI	TTCGAA	1 cut(s)	732
SgrBI	CCGCGG	1 cut(s)	2119
SinI	GGWCC	6 cut(s)	172, 1349, 1441, 1840, 2035, 2229
SmiMI	CAYNNNNRTG	1 cut(s)	240
SmlI	CTYRAG	1 cut(s)	2096
SmoI	CTYRAG	1 cut(s)	2096
SseBI	AGGCCT	1 cut(s)	1726
SsiI	CCGC	8 cut(s)	207, 737, 784, 1008, 1214, 2116, 2118, 2351
SspI	AATATT	2 cut(s)	622, 790
SspMI	CTAG	5 cut(s)	1059, 1416, 1746, 2199, 2216
StuI	AGGCCT	1 cut(s)	1726
StyD4I	CCNGG	9 cut(s)	168, 447, 589, 686, 1345, 1563, 1709, 1726, 2047
StyI	CCWWGG	2 cut(s)	480, 1511
TaaI	ACNGT	5 cut(s)	781, 1019, 1193, 1778, 2011
TaiI	ACGT	1 cut(s)	1878
TaqI	TCGA	8 cut(s)	500, 732, 828, 1383, 1741, 1827, 2031, 2064
TatI	WGTACW	7 cut(s)	269, 695, 704, 920, 1043, 1406, 1736
TauI	GCSGC	2 cut(s)	2121, 2353
TfiI	GAWTC	5 cut(s)	262, 586, 710, 1768, 1829
Tru1I	TTAA	6 cut(s)	903, 1068, 1394, 1424, 1899, 2129
Tru9I	TTAA	6 cut(s)	903, 1068, 1394, 1424, 1899, 2129
TscAI	CASTG	8 cut(s)	21, 153, 639, 786, 968, 1017, 1056, 2016
TseFI	GTSAC	1 cut(s)	1019
Tsp45I	GTSAC	1 cut(s)	1019
TspRI	CASTG	8 cut(s)	21, 153, 639, 786, 968, 1017, 1056, 2016
Van91I	CCANNNNNTGG	1 cut(s)	454
VneI	GTGCAC	1 cut(s)	1429
VpaK11BI	GGWCC	6 cut(s)	172, 1349, 1441, 1840, 2035, 2229
XagI	CCTNNNNNAGG	2 cut(s)	840, 1356
XapI	RAATTY	3 cut(s)	94, 559, 1549
XceI	RCATGY	2 cut(s)	1227, 2207
XmnI	GAANNNNTTC	2 cut(s)	756, 1553
XspI	CTAG	5 cut(s)	1059, 1416, 1746, 2199, 2216
ZrmI	AGTACT	4 cut(s)	697, 1045, 1408, 1738
Zsp2I	ATGCAT	1 cut(s)	237

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.