Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr6

Orthogroup ID

OG0004477

Physical Location & Seq

Genomic Coordinates Forward (+)

15995426 .. 15999149

Gene Structure 3724 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom06g10710.6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2373 bp

ATGGGTGAAAGTTCAGTGGTGAGAGAGAGGCTGAGGAGTCTGTGTGTTGGCAATGGGTGGTCTTATGGGGTTTTCTGGCGCTTTGATCACATAAATTCCATGTTGTTGACAATGGGAGATGCCTACTATGAAGACCATGTGGGAGCAGTGATTGAAAATATGCTTTCCCAGGTCCACATACTTGGTGAAGGTGTTATTGGGCAAACCGCTTTCGCCGGAAAGCATCAATGGATGCATTCAGATGTTCATGGTGGAGGATGGAATCCATGCACTTCTCTTGAAAGTCAAGATATGTTTCAGGATTGTTCTGAGTTCGGTAGCCAATTTTCCTCCGGTATAAAGACAATTGCAACAATCTCGGTTGAACCACAAGGAGTAATTCAGTTAGGATCCACCGAAAAGATTATGGAGAGGCTGGAAGTTGTGGATGAAACAAAAAGGTTGTTCCAGGAGATGGACAATCTTGACGGGCTTTTTCCTTTGGAAAATGCACCTTCATCGATGAACAATGAAACTAGTGATCTAAATGAGTTGTTTGCTTCATTGATTTCACCTGAGAATTCCAACAATGGAGATGTTGCCTTGAATCCCGATGATAAATGTAATGACCACCGAGGAAATATTATTTCTGCAGTGGGTTTTCAATCTACATCATCTGATGATATTGGCGCAACTGATACAACCCCCTGGTTTAGTACTTGGAGTACTGAATCTTCAATTTTGACTTCATTCGAACCGCAGTTGGCATCTGAAATTATTCTTCATGATTCGTTCGAGTCTTGCAGAGATACAGCGCAGAATATTCAGGTGGACTCGGCATTCACTTCATTAGCTCACTTCGAGAAACCTATTCAAGGAAGTTGTGGATATCAGATGAACGACCAACAATCTCTGCATGGATTCCCGGTGGAGTTTAACCCAGCTGATTTGAGTACAGATTTCTCTAAACTATACCAGTTGGATGATCTTTCCCAGTGGTTTGCTACTTCACCGGAACAGAACTTCAATGCAATGGCAACAGCACTGAACGGTGACTTCTCACAAGTAAAAGAAAGTACTTCAGTGTTGTCTAGTCTGATTGAAGGTGATAACTTTATTGATGTTCCAATTCAACATCCAGCTAACTCCATTCAAAGTTCCATTACAAATCCATTTAGCGTTGATGGACATGAGAAATCTGTGATCATTCAGAGTGTTGAAAATGGTTCGTTTGATGGTTTGGGAGCGGATTTTGCATGTGGTCAAGTCGGGAAGTGTTGGGAAGATACTATGATGCCTACTGTCAATGGTGGCTACTTGGCTACTGGTACTGCTTTCTCAGAGTCAGAAATAACTGGCTCTATGCCTGGTCCTCGTAAAGGGTTGTTCTCAGAGTTAGGACTCGAAGAGATTTTAAATGGTAAAAGTACTACTTCCAGCTCCTTAAAATGCACTTTAGAGGTCCAGTCATCCACCACAAGAAAAAGGAAGTCAGAATGTTTATCTGTGAATAGCAATCAGGTTCAATTGCCAAGGCTTGCTGGCTTGGATAGGAGCACGCATTTGGCGAATTCTTTCTACAACCCGGACAATACAAACAGACTTGCTCCAAAGAAAGACTGTTTCCCAAAATCACAGGTAGGCTTATGGATTGACGATAGCTATAGCATCAATGCTAAAAGTGCGGTTCCAGATAAACAACAGAAAGCTGAGGAACACACAAAGAACACCAGGAAAAGGGCAAGGCCTGGGGAGAGTACTCGACCTAGACCCAAGGATCGCCAGCAGATTCAAGACCGTATCAAAGAGTTGAGAGGGATCATCCCTACTGGTGGCAAGTGTAGCATCGATTCTTTGTTGGACCGGACAATCAAATACATGGTCTTCTTGCAAAATGTGATGAAATACGCGGATAAGCTTAAACAGACTCATGAGCCAAAGCTGATTGGCAAGGAGAATGGAGTGGTTCTAAAAGACAACAGCACCAAATGTGGTGGTAATACATGGGCATTAGCAGTTGAGGGTCAAACAGTGGTTTGCCCTATAATAGTCGAGGACCTTGATCAGCCTGGCCAAATGCTTATTGAGATGCTTTGTGAGGAACAAGGTTTCTTTCTTGAGATAGCAGACATAATCCGCGGCTTTGGGTTAAATATCTTGAAGGGGGTGATGGAAAGTCGTGAAGATAAGATATGGGCAAGATTTATCGTTGAGGCAACTAGGCATGTAACAAGGCTAGATGTGTTCTGGTCCCTTGTCCGGCTTCTACAACAAACAACTACGGGTGTGGTCGATCCCACTAATCGGCTAAGTAATGTAGTAGATAGTGGGGTTCCTCCTCTATTGGATAGTTGTCAGCAACAAAGCTTGCCGCCTCCGGTCAGTTTGATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000280 GO:0003006 GO:0003674 GO:0003700 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006355 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006996 GO:0007049 GO:0007140 GO:0007154 GO:0007165 GO:0007275 GO:0007276 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009733 GO:0009791 GO:0009888 GO:0009889 GO:0009987 GO:0010033 GO:0010087 GO:0010089 GO:0010154 GO:0010468 GO:0010556 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019219 GO:0019222 GO:0019538 GO:0019953 GO:0022402 GO:0022412 GO:0022414 GO:0022622 GO:0023052 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032504 GO:0032870 GO:0035556 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0044703 GO:0048232 GO:0048285 GO:0048316 GO:0048364 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051321 GO:0051704 GO:0051716 GO:0060255 GO:0061458 GO:0065007 GO:0070887 GO:0071310 GO:0071365 GO:0071495 GO:0071704 GO:0071840 GO:0080090 GO:0090058 GO:0099402 GO:0140013 GO:0140096 GO:0140110 GO:1901564 GO:1903046 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

bHLH-MYC_N

Protein Analysis

791

Amino Acids

87.14

Weight (kDa)

4.84

Isoelectric Point (pI)

42.77

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004477)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G64625 AT1G64625 AT1G64625 AT1G64625 AT5G24352 AT5G24352
fragaria_vesca	FvH4_4g16070 FvH4_4g16070 FvH4_4g16070 FvH4_5g11300 FvH4_5g11300 FvH4_5g11300 FvH4_5g11300 FvH4_5g11300
malus_domestica	MD06G1114400.v1.1 MD14G1135600.v1.1
prunus_persica	Prupe.5G127100_v2.0.a1
pyrus_communis	pycom06g10710 pycom14g10880 pycom14g10890
rosa_chinensis	RchiOBHm_Chr7g0186541
rosa_laevigata	RLG00000004836
rosa_multiflora	Rmu_sc0000645.1_g000021
rosa_roxburghii	Rroxscaffold_3G00268060
rosa_rugosa	Rorug06G0475000 Rorug06G0475000
rosa_samantha	Rh7AG066100 Rh7BG082000 Rh7CG081700 Rh7DG082700
rosa_wichuraiana	Rw7G006870 Rw7G007090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	454
AccBSI	CCGCTC	1 cut(s)	1226
AccII	CGCG	2 cut(s)	1889, 2118
AciI	CCGC	8 cut(s)	207, 737, 1226, 1664, 1889, 2116, 2118, 2351
AclWI	GGATC	5 cut(s)	384, 397, 1764, 1805, 2267
AcoI	YGGCCR	1 cut(s)	2050
AcsI	RAATTY	3 cut(s)	94, 559, 1549
AcuI	CTGAAG	1 cut(s)	1044
AfaI	GTAC	7 cut(s)	697, 706, 934, 1057, 1309, 1408, 1738
AfiI	CCNNNNNNNGG	7 cut(s)	454, 854, 1358, 1716, 1811, 2238, 2283
AhlI	ACTAGT	1 cut(s)	515
AjnI	CCWGG	7 cut(s)	168, 447, 686, 1345, 1709, 1726, 2047
AjuI	GAANNNNNNNTTGG	2 cut(s)	180, 212
AluBI	AGCT	9 cut(s)	833, 923, 1121, 1419, 1641, 1688, 1897, 1921, 2346
AluI	AGCT	9 cut(s)	833, 923, 1121, 1419, 1641, 1688, 1897, 1921, 2346
Alw21I	GWGCWC	1 cut(s)	1538
AlwI	GGATC	5 cut(s)	384, 397, 1764, 1805, 2267
AoxI	GGCC	2 cut(s)	1724, 2050
ApoI	RAATTY	3 cut(s)	94, 559, 1549
ArsI	GACNNNNNNTTYG	2 cut(s)	1845, 1877
Asp700I	GAANNNNTTC	2 cut(s)	756, 1553
AspLEI	GCGC	3 cut(s)	81, 671, 796
AspS9I	GGNCC	6 cut(s)	172, 1349, 1441, 1840, 2035, 2229
AsuC2I	CCSGG	2 cut(s)	905, 1565
AsuHPI	GGTGA	8 cut(s)	17, 31, 197, 543, 981, 1043, 1097, 2158
AsuII	TTCGAA	1 cut(s)	732
AvaII	GGWCC	6 cut(s)	172, 1349, 1441, 1840, 2035, 2229
BalI	TGGCCA	1 cut(s)	2052
BamHI	GGATCC	1 cut(s)	389
BarI	GAAGNNNNNNTAC	2 cut(s)	697, 729
BbsI	GAAGAC	2 cut(s)	138, 1855
Bbv12I	GWGCWC	1 cut(s)	1538
BbvCI	CCTCAGC	2 cut(s)	32, 1689
BccI	CCATC	5 cut(s)	252, 448, 1157, 1208, 2143
BcgI	CGANNNNNNTGC	4 cut(s)	339, 373, 480, 514
BciT130I	CCWGG	7 cut(s)	170, 449, 688, 1347, 1711, 1728, 2049
BclI	TGATCA	3 cut(s)	85, 1182, 2041
BcnI	CCSGG	2 cut(s)	905, 1565
BcuI	ACTAGT	1 cut(s)	515
BfaI	CTAG	5 cut(s)	516, 1071, 1746, 2199, 2216
BfmI	CTRYAG	2 cut(s)	630, 1642
BfoI	RGCGCY	1 cut(s)	82
BisI	GCNGC	2 cut(s)	2119, 2351
BlsI	GCNGC	2 cut(s)	2120, 2352
BmcAI	AGTACT	5 cut(s)	697, 706, 1057, 1408, 1738
Bme1390I	CCNGG	9 cut(s)	170, 449, 688, 905, 1347, 1565, 1711, 1728, 2049
Bme18I	GGWCC	6 cut(s)	172, 1349, 1441, 1840, 2035, 2229
BmgT120I	GGNCC	6 cut(s)	172, 1349, 1441, 1840, 2035, 2229
BmiI	GGNNCC	4 cut(s)	391, 1668, 2231, 2313
BmrFI	CCNGG	9 cut(s)	170, 449, 688, 905, 1347, 1565, 1711, 1728, 2049
BmrI	ACTGGG	1 cut(s)	967
BmsI	GCATC	8 cut(s)	109, 222, 232, 755, 1263, 1656, 1833, 2058
BmuI	ACTGGG	1 cut(s)	967
BpiI	GAAGAC	2 cut(s)	138, 1855
Bpu10I	CCTNAGC	2 cut(s)	32, 1689
Bpu14I	TTCGAA	1 cut(s)	732
BpuEI	CTTGAG	1 cut(s)	2117
BpuMI	CCSGG	2 cut(s)	905, 1565
Bsa29I	ATCGAT	2 cut(s)	500, 1827
BsaJI	CCNNGG	7 cut(s)	168, 613, 686, 1511, 1727, 1752, 2116
BsaWI	WCCGGW	4 cut(s)	332, 991, 1842, 2356
BsaXI	ACNNNNNCTCC	2 cut(s)	28, 58
Bsc4I	CCNNNNNNNGG	7 cut(s)	454, 854, 1358, 1716, 1811, 2238, 2283
Bse1I	ACTGG	6 cut(s)	955, 973, 1309, 1339, 1444, 1813
Bse3DI	GCAATG	2 cut(s)	58, 1017
BseBI	CCWGG	7 cut(s)	170, 449, 688, 1347, 1711, 1728, 2049
BseCI	ATCGAT	2 cut(s)	500, 1827
BseDI	CCNNGG	7 cut(s)	168, 613, 686, 1511, 1727, 1752, 2116
BseGI	GGATG	7 cut(s)	237, 263, 433, 967, 1114, 1448, 1800
BseLI	CCNNNNNNNGG	7 cut(s)	454, 854, 1358, 1716, 1811, 2238, 2283
BseMI	GCAATG	2 cut(s)	58, 1017
BseMII	CTCAG	6 cut(s)	23, 300, 546, 1332, 1383, 1680
BseNI	ACTGG	6 cut(s)	955, 973, 1309, 1339, 1444, 1813
BseRI	GAGGAG	2 cut(s)	49, 2307
BseYI	CCCAGC	1 cut(s)	919
Bsh1236I	CGCG	2 cut(s)	1889, 2118
BshFI	GGCC	2 cut(s)	1726, 2052
BshVI	ATCGAT	2 cut(s)	500, 1827
BsiHKAI	GWGCWC	1 cut(s)	1538
BsiSI	CCGG	8 cut(s)	216, 333, 905, 992, 1565, 1843, 2239, 2357
BslFI	GGGAC	1 cut(s)	2215
BslI	CCNNNNNNNGG	7 cut(s)	454, 854, 1358, 1716, 1811, 2238, 2283
BsmFI	GGGAC	1 cut(s)	2215
BsmI	GAATGC	2 cut(s)	235, 818
BsnI	GGCC	2 cut(s)	1726, 2052
Bsp119I	TTCGAA	1 cut(s)	732
Bsp1286I	GDGCHC	1 cut(s)	1538
Bsp143I	GATC	9 cut(s)	85, 389, 520, 964, 1182, 1756, 1797, 2041, 2272
BspACI	CCGC	8 cut(s)	207, 737, 1226, 1664, 1889, 2116, 2118, 2351
BspANI	GGCC	2 cut(s)	1726, 2052
BspCNI	CTCAG	6 cut(s)	24, 301, 547, 1331, 1382, 1681
BspDI	ATCGAT	2 cut(s)	500, 1827
BspFNI	CGCG	2 cut(s)	1889, 2118
BspHI	TCATGA	2 cut(s)	763, 1909
BspLI	GGNNCC	4 cut(s)	391, 1668, 2231, 2313
BspMAI	CTGCAG	1 cut(s)	634
BspPI	GGATC	5 cut(s)	384, 397, 1764, 1805, 2267
BspT104I	TTCGAA	1 cut(s)	732
BsrBI	CCGCTC	1 cut(s)	1226
BsrDI	GCAATG	2 cut(s)	58, 1017
BsrI	ACTGG	6 cut(s)	955, 973, 1309, 1339, 1444, 1813
BssECI	CCNNGG	7 cut(s)	168, 613, 686, 1511, 1727, 1752, 2116
BssMI	GATC	9 cut(s)	85, 389, 520, 964, 1182, 1756, 1797, 2041, 2272
BssT1I	CCWWGG	2 cut(s)	1511, 1752
Bst2UI	CCWGG	7 cut(s)	170, 449, 688, 1347, 1711, 1728, 2049
Bst4CI	ACNGT	5 cut(s)	1031, 1282, 1601, 1778, 2011
Bst6I	CTCTTC	1 cut(s)	1380
BstBI	TTCGAA	1 cut(s)	732
BstC8I	GCNNGC	5 cut(s)	1518, 1522, 1538, 1763, 2348
BstDEI	CTNAG	7 cut(s)	32, 309, 555, 1318, 1369, 1689, 2288
BstDSI	CCRYGG	1 cut(s)	2116
BstENI	CCTNNNNNAGG	2 cut(s)	852, 1356
BstF5I	GGATG	7 cut(s)	237, 263, 433, 967, 1114, 1448, 1800
BstFNI	CGCG	2 cut(s)	1889, 2118
BstH2I	RGCGCY	1 cut(s)	82
BstHHI	GCGC	3 cut(s)	81, 671, 796
BstKTI	GATC	9 cut(s)	88, 392, 523, 967, 1185, 1759, 1800, 2044, 2275
BstMBI	GATC	9 cut(s)	85, 389, 520, 964, 1182, 1756, 1797, 2041, 2272
BstMWI	GCNNNNNNNGC	3 cut(s)	1232, 1661, 1821
BstNI	CCWGG	7 cut(s)	170, 449, 688, 1347, 1711, 1728, 2049
BstNSI	RCATGY	2 cut(s)	1239, 2207
BstSCI	CCNGG	9 cut(s)	168, 447, 686, 903, 1345, 1563, 1709, 1726, 2047
BstSFI	CTRYAG	2 cut(s)	630, 1642
BstUI	CGCG	2 cut(s)	1889, 2118
BstV2I	GAAGAC	2 cut(s)	138, 1855
BstX2I	RGATCY	1 cut(s)	389
BstXI	CCANNNNNNTGG	1 cut(s)	182
BstYI	RGATCY	1 cut(s)	389
Bsu15I	ATCGAT	2 cut(s)	500, 1827
BsuRI	GGCC	2 cut(s)	1726, 2052
BsuTUI	ATCGAT	2 cut(s)	500, 1827
BtgI	CCRYGG	1 cut(s)	2116
BtsCI	GGATG	7 cut(s)	237, 263, 433, 967, 1114, 1448, 1800
BtsI	GCAGTG	2 cut(s)	153, 639
BtsIMutI	CAGTG	7 cut(s)	21, 153, 639, 980, 1022, 1068, 2016
Cac8I	GCNNGC	5 cut(s)	1518, 1522, 1538, 1763, 2348
CciI	TCATGA	2 cut(s)	763, 1909
CfoI	GCGC	3 cut(s)	81, 671, 796
Cfr13I	GGNCC	6 cut(s)	172, 1349, 1441, 1840, 2035, 2229
Cfr42I	CCGCGG	1 cut(s)	2119
ClaI	ATCGAT	2 cut(s)	500, 1827
Csp6I	GTAC	7 cut(s)	696, 705, 933, 1056, 1308, 1407, 1737
CspCI	CAANNNNNGTGG	2 cut(s)	1954, 1989
CviQI	GTAC	7 cut(s)	696, 705, 933, 1056, 1308, 1407, 1737
DdeI	CTNAG	7 cut(s)	32, 309, 555, 1318, 1369, 1689, 2288
DpnI	GATC	9 cut(s)	87, 391, 522, 966, 1184, 1758, 1799, 2043, 2274
DpnII	GATC	9 cut(s)	85, 389, 520, 964, 1182, 1756, 1797, 2041, 2272
DraI	TTTAAA	1 cut(s)	1395
EaeI	YGGCCR	1 cut(s)	2050
Eam1104I	CTCTTC	1 cut(s)	1380
EarI	CTCTTC	1 cut(s)	1380
Eco130I	CCWWGG	2 cut(s)	1511, 1752
Eco147I	AGGCCT	1 cut(s)	1726
Eco32I	GATATC	1 cut(s)	869
Eco47I	GGWCC	6 cut(s)	172, 1349, 1441, 1840, 2035, 2229
Eco57I	CTGAAG	1 cut(s)	1044
EcoNI	CCTNNNNNAGG	2 cut(s)	852, 1356
EcoO109I	RGGNCCY	1 cut(s)	2035
EcoRI	GAATTC	2 cut(s)	559, 1549
EcoRII	CCWGG	7 cut(s)	168, 447, 686, 1345, 1709, 1726, 2047
EcoRV	GATATC	1 cut(s)	869
EcoT14I	CCWWGG	2 cut(s)	1511, 1752
EcoT22I	ATGCAT	1 cut(s)	237
ErhI	CCWWGG	2 cut(s)	1511, 1752
FalI	AAGNNNNNCTT	2 cut(s)	1396, 1428
FaqI	GGGAC	1 cut(s)	2215
FbaI	TGATCA	3 cut(s)	85, 1182, 2041
Fnu4HI	GCNGC	2 cut(s)	2119, 2351
FokI	GGATG	7 cut(s)	244, 270, 440, 974, 1101, 1435, 1787
Fsp4HI	GCNGC	2 cut(s)	2119, 2351
FspBI	CTAG	5 cut(s)	516, 1071, 1746, 2199, 2216
GlaI	GCGC	3 cut(s)	80, 670, 795
GluI	GCNGC	2 cut(s)	2119, 2351
GsaI	CCCAGC	1 cut(s)	923
HaeII	RGCGCY	1 cut(s)	82
HaeIII	GGCC	2 cut(s)	1726, 2052
HapII	CCGG	8 cut(s)	216, 333, 905, 992, 1565, 1843, 2239, 2357
HhaI	GCGC	3 cut(s)	81, 671, 796
Hin6I	GCGC	3 cut(s)	79, 669, 794
HinP1I	GCGC	3 cut(s)	79, 669, 794
HincII	GTYRAC	1 cut(s)	108
HindII	GTYRAC	1 cut(s)	108
HindIII	AAGCTT	2 cut(s)	1895, 2344
HpaII	CCGG	8 cut(s)	216, 333, 905, 992, 1565, 1843, 2239, 2357
HphI	GGTGA	8 cut(s)	17, 31, 197, 543, 981, 1043, 1097, 2158
Hpy166II	GTNNAC	3 cut(s)	108, 175, 811
Hpy8I	GTNNAC	3 cut(s)	108, 175, 811
HpyAV	CCTTC	4 cut(s)	182, 504, 1076, 2134
HpyCH4III	ACNGT	5 cut(s)	1031, 1282, 1601, 1778, 2011
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1232, 1661, 1821
HpyF3I	CTNAG	7 cut(s)	32, 309, 555, 1318, 1369, 1689, 2288
HspAI	GCGC	3 cut(s)	79, 669, 794
Ksp22I	TGATCA	3 cut(s)	85, 1182, 2041
KspI	CCGCGG	1 cut(s)	2119
Kzo9I	GATC	9 cut(s)	85, 389, 520, 964, 1182, 1756, 1797, 2041, 2272
LmnI	GCTCC	5 cut(s)	143, 1223, 1424, 1533, 1591
LweI	GCATC	8 cut(s)	109, 222, 232, 755, 1263, 1656, 1833, 2058
MaeI	CTAG	5 cut(s)	516, 1071, 1746, 2199, 2216
MaeIII	GTNAC	2 cut(s)	1031, 2206
MalI	GATC	9 cut(s)	87, 391, 522, 966, 1184, 1758, 1799, 2043, 2274
MbiI	CCGCTC	1 cut(s)	1226
MboI	GATC	9 cut(s)	85, 389, 520, 964, 1182, 1756, 1797, 2041, 2272
MboII	GAAGA	7 cut(s)	143, 705, 752, 1274, 1397, 1855, 2174
MfeI	CAATTG	2 cut(s)	345, 1505
MflI	RGATCY	1 cut(s)	389
MhlI	GDGCHC	1 cut(s)	1538
MlsI	TGGCCA	1 cut(s)	2052
MluNI	TGGCCA	1 cut(s)	2052
MlyI	GAGTC	6 cut(s)	46, 785, 806, 1331, 1374, 1900
MmeI	TCCRAC	3 cut(s)	588, 939, 1818
Mox20I	TGGCCA	1 cut(s)	2052
Mph1103I	ATGCAT	1 cut(s)	237
MroXI	GAANNNNTTC	2 cut(s)	756, 1553
MscI	TGGCCA	1 cut(s)	2052
MseI	TTAA	5 cut(s)	915, 1394, 1424, 1899, 2129
MslI	CAYNNNNRTG	1 cut(s)	240
Msp20I	TGGCCA	1 cut(s)	2052
MspA1I	CMGCKG	2 cut(s)	923, 2118
MspI	CCGG	8 cut(s)	216, 333, 905, 992, 1565, 1843, 2239, 2357
MspR9I	CCNGG	9 cut(s)	170, 449, 688, 905, 1347, 1565, 1711, 1728, 2049
MunI	CAATTG	2 cut(s)	345, 1505
Mva1269I	GAATGC	2 cut(s)	235, 818
MvaI	CCWGG	7 cut(s)	170, 449, 688, 1347, 1711, 1728, 2049
MvnI	CGCG	2 cut(s)	1889, 2118
MwoI	GCNNNNNNNGC	3 cut(s)	1232, 1661, 1821
NciI	CCSGG	2 cut(s)	905, 1565
NdeII	GATC	9 cut(s)	85, 389, 520, 964, 1182, 1756, 1797, 2041, 2272
NlaIV	GGNNCC	4 cut(s)	391, 1668, 2231, 2313
NmeAIII	GCCGAG	1 cut(s)	794
NmuCI	GTSAC	1 cut(s)	1031
NsiI	ATGCAT	1 cut(s)	237
NspI	RCATGY	2 cut(s)	1239, 2207
NspV	TTCGAA	1 cut(s)	732
PagI	TCATGA	2 cut(s)	763, 1909
PceI	AGGCCT	1 cut(s)	1726
PcsI	WCGNNNNNNNCGW	1 cut(s)	1544
PctI	GAATGC	2 cut(s)	235, 818
PdmI	GAANNNNTTC	2 cut(s)	756, 1553
PfeI	GAWTC	7 cut(s)	262, 586, 710, 767, 900, 1768, 1829
PflMI	CCANNNNNTGG	1 cut(s)	454
PfoI	TCCNGGA	1 cut(s)	447
PkrI	GCNGC	2 cut(s)	2120, 2352
PleI	GAGTC	6 cut(s)	45, 784, 806, 1330, 1374, 1900
PpsI	GAGTC	6 cut(s)	45, 784, 806, 1330, 1374, 1900
PpuMI	RGGWCCY	1 cut(s)	2035
Psp5II	RGGWCCY	1 cut(s)	2035
Psp6I	CCWGG	7 cut(s)	168, 447, 686, 1345, 1709, 1726, 2047
PspFI	CCCAGC	1 cut(s)	919
PspGI	CCWGG	7 cut(s)	168, 447, 686, 1345, 1709, 1726, 2047
PspN4I	GGNNCC	4 cut(s)	391, 1668, 2231, 2313
PspPI	GGNCC	6 cut(s)	172, 1349, 1441, 1840, 2035, 2229
PspPPI	RGGWCCY	1 cut(s)	2035
PstI	CTGCAG	1 cut(s)	634
PsuI	RGATCY	1 cut(s)	389
PvuII	CAGCTG	1 cut(s)	923
RsaI	GTAC	7 cut(s)	697, 706, 934, 1057, 1309, 1408, 1738
RsaNI	GTAC	7 cut(s)	696, 705, 933, 1056, 1308, 1407, 1737
RseI	CAYNNNNRTG	1 cut(s)	240
SacII	CCGCGG	1 cut(s)	2119
SaqAI	TTAA	5 cut(s)	915, 1394, 1424, 1899, 2129
SatI	GCNGC	2 cut(s)	2119, 2351
Sau3AI	GATC	9 cut(s)	85, 389, 520, 964, 1182, 1756, 1797, 2041, 2272
Sau96I	GGNCC	6 cut(s)	172, 1349, 1441, 1840, 2035, 2229
ScaI	AGTACT	5 cut(s)	697, 706, 1057, 1408, 1738
SchI	GAGTC	6 cut(s)	46, 785, 806, 1331, 1374, 1900
ScrFI	CCNGG	9 cut(s)	170, 449, 688, 905, 1347, 1565, 1711, 1728, 2049
SduI	GDGCHC	1 cut(s)	1538
SfaNI	GCATC	8 cut(s)	109, 222, 232, 755, 1263, 1656, 1833, 2058
SfcI	CTRYAG	2 cut(s)	630, 1642
Sfr303I	CCGCGG	1 cut(s)	2119
SfuI	TTCGAA	1 cut(s)	732
SgrBI	CCGCGG	1 cut(s)	2119
SinI	GGWCC	6 cut(s)	172, 1349, 1441, 1840, 2035, 2229
SmiMI	CAYNNNNRTG	1 cut(s)	240
SmlI	CTYRAG	1 cut(s)	2096
SmoI	CTYRAG	1 cut(s)	2096
SpeI	ACTAGT	1 cut(s)	515
SseBI	AGGCCT	1 cut(s)	1726
SsiI	CCGC	8 cut(s)	207, 737, 1226, 1664, 1889, 2116, 2118, 2351
SspI	AATATT	2 cut(s)	622, 802
SspMI	CTAG	5 cut(s)	516, 1071, 1746, 2199, 2216
StuI	AGGCCT	1 cut(s)	1726
StyD4I	CCNGG	9 cut(s)	168, 447, 686, 903, 1345, 1563, 1709, 1726, 2047
StyI	CCWWGG	2 cut(s)	1511, 1752
TaaI	ACNGT	5 cut(s)	1031, 1282, 1601, 1778, 2011
TaqI	TCGA	9 cut(s)	500, 732, 774, 840, 1383, 1741, 1827, 2031, 2271
TatI	WGTACW	6 cut(s)	695, 704, 932, 1055, 1406, 1736
TauI	GCSGC	2 cut(s)	2121, 2353
TfiI	GAWTC	7 cut(s)	262, 586, 710, 767, 900, 1768, 1829
Tru1I	TTAA	5 cut(s)	915, 1394, 1424, 1899, 2129
Tru9I	TTAA	5 cut(s)	915, 1394, 1424, 1899, 2129
TscAI	CASTG	7 cut(s)	21, 153, 639, 980, 1029, 1068, 2016
TseFI	GTSAC	1 cut(s)	1031
Tsp45I	GTSAC	1 cut(s)	1031
TspRI	CASTG	7 cut(s)	21, 153, 639, 980, 1029, 1068, 2016
Van91I	CCANNNNNTGG	1 cut(s)	454
VpaK11BI	GGWCC	6 cut(s)	172, 1349, 1441, 1840, 2035, 2229
XagI	CCTNNNNNAGG	2 cut(s)	852, 1356
XapI	RAATTY	3 cut(s)	94, 559, 1549
XceI	RCATGY	2 cut(s)	1239, 2207
XmnI	GAANNNNTTC	2 cut(s)	756, 1553
XspI	CTAG	5 cut(s)	516, 1071, 1746, 2199, 2216
ZrmI	AGTACT	5 cut(s)	697, 706, 1057, 1408, 1738
Zsp2I	ATGCAT	1 cut(s)	237

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.