Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr14

Orthogroup ID

OG0004477

Physical Location & Seq

Genomic Coordinates Forward (+)

21567155 .. 21571792

Gene Structure 4638 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD14G1135600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2379 bp

ATGGCCCAAATGGGTGAAAGTTCAGTGGTAAGAGAGAGGCTGAGGAGTCTGTGTGTTAGCAATGGGTGGTCTTATGGGGTTTTCTGGTGCTTTGATCACAGAAATTCCATGTTGTTGACAATGGGAGATGCCTACTATGAAGATCATGTGGGAGCAGTGATTGAAAATATGCTTCCACAGGTCCATGTACTTGGAGAAGGTATTATTGGGCAAACCGCTTTCACCGGAAAGCATCGATGGATGCATTCAGATGCTCACGGTGGAGGATGGAATCCATGCAGTTCTCTTGAAAATCAAGATATGTTTCAGGATTATTCTGAGTTCAGTTGCCAATTTTCTTCTGGTATAAAGACAATTGCAATAATCTCCGTTGAACCACGAGGACTAATTCAGTTAGGATCCACCAAAAAGATTATGGAGACGCTGGAAGTTTTGGATGAAACAAAAAGGTTGTTTCGGGAGTTGGAAAATCTTGATGGGCTTATTCCTTTGGAAAATGCACCTTCATCCATGAACAATGAAACTAGTGATCTAAATGAGTTGTTTGCTTCATTGATTTCATCTGGGAATTCCTACAATGGAGATGTTAACTTGAATCCAGGTGACAAATGTGATGAGCACCGAGGAAATATTATTTCTGCAGTGGGTTTTCAGTCTACATCATTTGATGATATTGGCTCAGCTGATAAAACCCCCTGGTCTAGTACGTGGAGTACCGAATCTTCACTTTTGACTTCATTCGAACCGCATTTGGCATCGGAAATTATTCTTCATGATTCGTTTGAGTCTTGCAGAGATACAGCAGGGAATATTCAGTTGGACTCGGCATTCACTTCATTAGCTGACTTCGAGAAACCTATTCAAGGAAGCTGTGGATATCAGATGGATAACCAGCAATCTCTGCATGGATTCCCGGTGGAGTGTAATCCAGCTGATTTAAGTATAGATCTCTCTAGATTGTACCAGTTGGATGATCTTTCCCAGTGGTTTACTGCTTCACCGGAACAGAAATTCAATGCAATGACAACCACACTGAACAATGACTTCTCACAAGTAATAGAAAGTACTTCAGTGTCGTCTAGTCTGGTTAAAGGTGATAACCTTATTCATGTTCCAATTCAAACTCCAGCTAACTCTATTCAAAGTTCGGTTACAAATCCATTTGGCGCCGAGGGACACGATAAATCTGTGATCATTCAGAGTGTTGATGGTTTGGGACCGGATTTTGCATGTGGTCAAGTCGGGAAGTGTTGGGAAGATGCTATAATGCCAGCAACCAGTGGTGGCTACTTGGCTGCTGGTACTGCTTTGACAAAATGCTTCTCAGAGTCAGAAATAACCGGTTCCATGCCTGGTCCTCGGAAGGGGTTGTTCTCAGAATTAGGACTCGAAGAGCTTTTAAATGGTAAAAGTAATACTTCCAGCTCCGTAAAATGCAATCTAGAGGACCAGTCATCCACCACTAGAAAAAGGAAATCAGAATGTTTATCTGTGAATAGCAATCAGGTTCAACTGCCATGGCTTACAGGCTTGGATACGAGTAAACATTCAGCGAAATCTTTCTATAACCTGGACAGGGCAAACAGTCTTGGTCCAAAGAAAGACTTTTTCCCAAAATCACAGGTAGGCTTATGGATTGATGACAGCTATAGCGTCAACGCTAGAAGTGCGGTTCAAGATAAACAGCAGAAATCCGAGGTACACCCAAAGAACACCAAGAAAAGGGCAAGGCCTGGGGAGAGTACTCGACCTAGACCTAAAGATCGCCAGCAGATTCAAGACCGTATCAAAGAGTTGAAGGGGATCATCCCTACTGGTGGCAAGTGTAGCATCGATTCTTTGTTGGACCGGACAATCAAATACATGGTCTTCTTGCAAAGCGTGACGAAATATGCAGATAAGCTTAAACAGACTCATGAGCCAAAGCTAATTGGCAAGGAGAATGGAGTGGTTCTAAAAGACAACAGCACCAAATGTGGTGGTAATACACGGGCATTAGCAGTTGAGGGTCAAACAGTGGTTTGCCCTATAATAGTCGAGGACCTTGATCAGCCGGGCCAAATGCTTATCGAGATGCTTTGTGAGAAACAAGGTTTCTTTCTTGAGATAGCAGACATAATCCGCGGCTTTGGGTTAAATATCTTGAAGGGGGTGATGGAAAGCCGGGAAGATAAGATATGGGCAAGGTTTATCGTTGAGGCAACTAGGCATGTAACAAGGCTAGATGTATTCTGGTCCCTTGTCCGGTTTCTACAACAAGCAACTACGGGTGTGGTTGATCCAACTAATCGGCTAAGTAATGTAGTAGATGGTGGGGTTCCTCCTATATTAGATGGTTGTCAGCAACAAATCTTGCCGCCTCCGGTCAGCTTGATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000280 GO:0003006 GO:0003674 GO:0003700 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006355 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006996 GO:0007049 GO:0007140 GO:0007154 GO:0007165 GO:0007275 GO:0007276 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009733 GO:0009791 GO:0009888 GO:0009889 GO:0009987 GO:0010033 GO:0010087 GO:0010089 GO:0010154 GO:0010468 GO:0010556 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019219 GO:0019222 GO:0019538 GO:0019953 GO:0022402 GO:0022412 GO:0022414 GO:0022622 GO:0023052 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032504 GO:0032870 GO:0035556 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0044703 GO:0048232 GO:0048285 GO:0048316 GO:0048364 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051321 GO:0051704 GO:0051716 GO:0060255 GO:0061458 GO:0065007 GO:0070887 GO:0071310 GO:0071365 GO:0071495 GO:0071704 GO:0071840 GO:0080090 GO:0090058 GO:0099402 GO:0140013 GO:0140096 GO:0140110 GO:1901564 GO:1903046 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

bHLH-MYC_N

Protein Analysis

793

Amino Acids

87.15

Weight (kDa)

5.21

Isoelectric Point (pI)

41.29

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
bHLH-MYC_N	PF14215	11 - 48	1.1e-07	bHLH-MYC and R2R3-MYB transcription factors N-terminal
bHLH-MYC_N	PF14215	57 - 152	2.7e-16	bHLH-MYC and R2R3-MYB transcription factors N-terminal
bHLH_LHW	PF23176	583 - 641	6e-28	Transcription factor LHW bHLH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0004477)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G64625 AT1G64625 AT1G64625 AT1G64625 AT5G24352 AT5G24352
fragaria_vesca	FvH4_4g16070 FvH4_4g16070 FvH4_4g16070 FvH4_5g11300 FvH4_5g11300 FvH4_5g11300 FvH4_5g11300 FvH4_5g11300
malus_domestica	MD06G1114400.v1.1 MD14G1135600.v1.1
prunus_persica	Prupe.5G127100_v2.0.a1
pyrus_communis	pycom06g10710 pycom14g10880 pycom14g10890
rosa_chinensis	RchiOBHm_Chr7g0186541
rosa_laevigata	RLG00000004836
rosa_multiflora	Rmu_sc0000645.1_g000021
rosa_roxburghii	Rroxscaffold_3G00268060
rosa_rugosa	Rorug06G0475000 Rorug06G0475000
rosa_samantha	Rh7AG066100 Rh7BG082000 Rh7CG081700 Rh7DG082700
rosa_wichuraiana	Rw7G006870 Rw7G007090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1166
AccI	GTMKAC	1 cut(s)	656
AccII	CGCG	1 cut(s)	2124
AciI	CCGC	6 cut(s)	216, 746, 1670, 2122, 2124, 2357
AclWI	GGATC	4 cut(s)	393, 406, 1811, 2273
AcsI	RAATTY	3 cut(s)	103, 568, 1010
AcuI	CTGAAG	1 cut(s)	1053
AcyI	GRCGYC	1 cut(s)	1167
AfaI	GTAC	8 cut(s)	189, 706, 715, 962, 1066, 1303, 1701, 1744
AfiI	CCNNNNNNNGG	6 cut(s)	863, 1364, 1576, 1722, 1817, 2244
AgeI	ACCGGT	1 cut(s)	1340
AhlI	ACTAGT	1 cut(s)	524
AjnI	CCWGG	5 cut(s)	598, 695, 1351, 1569, 1732
AjuI	GAANNNNNNNTTGG	4 cut(s)	189, 221, 800, 832
Alw21I	GWGCWC	1 cut(s)	621
Alw26I	GTCTC	1 cut(s)	413
AlwI	GGATC	4 cut(s)	393, 406, 1811, 2273
AoxI	GGCC	3 cut(s)	3, 1730, 2056
ApeKI	GCWGC	1 cut(s)	1295
ApoI	RAATTY	3 cut(s)	103, 568, 1010
ArsI	GACNNNNNNTTYG	2 cut(s)	1851, 1883
AsiGI	ACCGGT	1 cut(s)	1340
Asp700I	GAANNNNTTC	2 cut(s)	765, 1559
AspLEI	GCGC	1 cut(s)	1169
AsuC2I	CCSGG	3 cut(s)	914, 2055, 2165
AsuHPI	GGTGA	6 cut(s)	26, 214, 614, 990, 1106, 2164
AsuII	TTCGAA	1 cut(s)	741
AvaII	GGWCC	8 cut(s)	181, 1217, 1355, 1447, 1592, 1846, 2041, 2235
BamHI	GGATCC	1 cut(s)	398
BanI	GGYRCC	1 cut(s)	1166
BarI	GAAGNNNNNNTAC	2 cut(s)	706, 738
BauI	CACGAG	1 cut(s)	378
BbsI	GAAGAC	1 cut(s)	1861
Bbv12I	GWGCWC	1 cut(s)	621
BbvCI	CCTCAGC	1 cut(s)	41
BbvI	GCAGC	1 cut(s)	1282
BccI	CCATC	8 cut(s)	231, 261, 470, 877, 1202, 2149, 2303, 2327
BciT130I	CCWGG	5 cut(s)	600, 697, 1353, 1571, 1734
BciVI	GTATCC	1 cut(s)	1528
BclI	TGATCA	3 cut(s)	94, 1191, 2047
BcnI	CCSGG	3 cut(s)	914, 2055, 2165
BcoDI	GTCTC	1 cut(s)	413
BcuI	ACTAGT	1 cut(s)	524
BfmI	CTRYAG	2 cut(s)	639, 1648
BfoI	RGCGCY	1 cut(s)	1170
BfuI	GTATCC	1 cut(s)	1528
BglII	AGATCT	1 cut(s)	946
BisI	GCNGC	3 cut(s)	1296, 2125, 2357
BlpI	GCTNAGC	1 cut(s)	679
BlsI	GCNGC	3 cut(s)	1297, 2126, 2358
BmcAI	AGTACT	2 cut(s)	1066, 1744
Bme1390I	CCNGG	8 cut(s)	600, 697, 914, 1353, 1571, 1734, 2055, 2165
Bme18I	GGWCC	8 cut(s)	181, 1217, 1355, 1447, 1592, 1846, 2041, 2235
BmiI	GGNNCC	6 cut(s)	400, 1168, 1218, 1345, 2237, 2319
BmrFI	CCNGG	8 cut(s)	600, 697, 914, 1353, 1571, 1734, 2055, 2165
BmrI	ACTGGG	1 cut(s)	976
BmsI	GCATC	8 cut(s)	118, 231, 241, 241, 764, 1249, 1839, 2064
BmuI	ACTGGG	1 cut(s)	976
BpiI	GAAGAC	1 cut(s)	1861
BpmI	CTGGAG	1 cut(s)	1110
Bpu10I	CCTNAGC	1 cut(s)	41
Bpu1102I	GCTNAGC	1 cut(s)	679
Bpu14I	TTCGAA	1 cut(s)	741
BpuEI	CTTGAG	1 cut(s)	2123
BpuMI	CCSGG	3 cut(s)	914, 2055, 2165
Bsa29I	ATCGAT	2 cut(s)	235, 1833
BsaAI	YACGTR	1 cut(s)	708
BsaHI	GRCGYC	1 cut(s)	1167
BsaJI	CCNNGG	8 cut(s)	622, 695, 1170, 1358, 1517, 1695, 1733, 2122
BsaWI	WCCGGW	7 cut(s)	224, 1000, 1219, 1340, 1848, 2244, 2362
BsaXI	ACNNNNNCTCC	2 cut(s)	37, 67
Bsc4I	CCNNNNNNNGG	6 cut(s)	863, 1364, 1576, 1722, 1817, 2244
Bse118I	RCCGGY	1 cut(s)	1340
Bse1I	ACTGG	5 cut(s)	964, 982, 1278, 1450, 1819
Bse3DI	GCAATG	2 cut(s)	67, 1026
BseBI	CCWGG	5 cut(s)	600, 697, 1353, 1571, 1734
BseCI	ATCGAT	2 cut(s)	235, 1833
BseDI	CCNNGG	8 cut(s)	622, 695, 1170, 1358, 1517, 1695, 1733, 2122
BseGI	GGATG	7 cut(s)	246, 272, 442, 506, 976, 1454, 1806
BseLI	CCNNNNNNNGG	6 cut(s)	863, 1364, 1576, 1722, 1817, 2244
BseMI	GCAATG	2 cut(s)	67, 1026
BseMII	CTCAG	5 cut(s)	32, 309, 693, 1338, 1389
BseNI	ACTGG	5 cut(s)	964, 982, 1278, 1450, 1819
BseRI	GAGGAG	1 cut(s)	58
BseXI	GCAGC	1 cut(s)	1282
Bsh1236I	CGCG	1 cut(s)	2124
BshFI	GGCC	3 cut(s)	5, 1732, 2058
BshNI	GGYRCC	1 cut(s)	1166
BshTI	ACCGGT	1 cut(s)	1340
BshVI	ATCGAT	2 cut(s)	235, 1833
BsiHKAI	GWGCWC	1 cut(s)	621
BslFI	GGGAC	3 cut(s)	1188, 1230, 2221
BslI	CCNNNNNNNGG	6 cut(s)	863, 1364, 1576, 1722, 1817, 2244
BsmAI	GTCTC	1 cut(s)	413
BsmBI	CGTCTC	1 cut(s)	413
BsmFI	GGGAC	3 cut(s)	1188, 1230, 2221
BsmI	GAATGC	2 cut(s)	244, 827
BsnI	GGCC	3 cut(s)	5, 1732, 2058
Bsp119I	TTCGAA	1 cut(s)	741
Bsp1286I	GDGCHC	1 cut(s)	621
Bsp1720I	GCTNAGC	1 cut(s)	679
Bsp19I	CCATGG	1 cut(s)	1517
BspACI	CCGC	6 cut(s)	216, 746, 1670, 2122, 2124, 2357
BspANI	GGCC	3 cut(s)	5, 1732, 2058
BspCNI	CTCAG	5 cut(s)	33, 310, 692, 1337, 1388
BspDI	ATCGAT	2 cut(s)	235, 1833
BspFNI	CGCG	1 cut(s)	2124
BspHI	TCATGA	2 cut(s)	772, 1915
BspLI	GGNNCC	6 cut(s)	400, 1168, 1218, 1345, 2237, 2319
BspMAI	CTGCAG	1 cut(s)	643
BspPI	GGATC	4 cut(s)	393, 406, 1811, 2273
BspQI	GCTCTTC	1 cut(s)	1386
BspT104I	TTCGAA	1 cut(s)	741
BspT107I	GGYRCC	1 cut(s)	1166
BsrDI	GCAATG	2 cut(s)	67, 1026
BsrFI	RCCGGY	1 cut(s)	1340
BsrI	ACTGG	5 cut(s)	964, 982, 1278, 1450, 1819
BssAI	RCCGGY	1 cut(s)	1340
BssECI	CCNNGG	8 cut(s)	622, 695, 1170, 1358, 1517, 1695, 1733, 2122
BssNI	GRCGYC	1 cut(s)	1167
BssSI	CACGAG	1 cut(s)	378
BssT1I	CCWWGG	1 cut(s)	1517
Bst2BI	CACGAG	1 cut(s)	378
Bst2UI	CCWGG	5 cut(s)	600, 697, 1353, 1571, 1734
Bst4CI	ACNGT	4 cut(s)	260, 1586, 1784, 2017
Bst6I	CTCTTC	1 cut(s)	1386
BstACI	GRCGYC	1 cut(s)	1167
BstAPI	GCANNNNNTGC	1 cut(s)	901
BstBAI	YACGTR	1 cut(s)	708
BstBI	TTCGAA	1 cut(s)	741
BstC8I	GCNNGC	2 cut(s)	1272, 1769
BstDEI	CTNAG	6 cut(s)	41, 318, 679, 1324, 1375, 2294
BstDSI	CCRYGG	2 cut(s)	1517, 2122
BstENI	CCTNNNNNAGG	1 cut(s)	861
BstF5I	GGATG	7 cut(s)	246, 272, 442, 506, 976, 1454, 1806
BstFNI	CGCG	1 cut(s)	2124
BstH2I	RGCGCY	1 cut(s)	1170
BstHHI	GCGC	1 cut(s)	1169
BstMAI	GTCTC	1 cut(s)	413
BstMWI	GCNNNNNNNGC	4 cut(s)	901, 1304, 1667, 1827
BstNI	CCWGG	5 cut(s)	600, 697, 1353, 1571, 1734
BstNSI	RCATGY	2 cut(s)	1233, 2213
BstSCI	CCNGG	8 cut(s)	598, 695, 912, 1351, 1569, 1732, 2053, 2163
BstSFI	CTRYAG	2 cut(s)	639, 1648
BstUI	CGCG	1 cut(s)	2124
BstV1I	GCAGC	1 cut(s)	1282
BstV2I	GAAGAC	1 cut(s)	1861
BstX2I	RGATCY	2 cut(s)	398, 946
BstXI	CCANNNNNNTGG	1 cut(s)	191
BstYI	RGATCY	2 cut(s)	398, 946
Bsu15I	ATCGAT	2 cut(s)	235, 1833
BsuI	GTATCC	1 cut(s)	1528
BsuRI	GGCC	3 cut(s)	5, 1732, 2058
BsuTUI	ATCGAT	2 cut(s)	235, 1833
BtgI	CCRYGG	2 cut(s)	1517, 2122
BtsCI	GGATG	7 cut(s)	246, 272, 442, 506, 976, 1454, 1806
BtsI	GCAGTG	2 cut(s)	162, 648
BtsIMutI	CAGTG	8 cut(s)	30, 162, 648, 989, 1031, 1077, 1285, 2022
Cac8I	GCNNGC	2 cut(s)	1272, 1769
CciI	TCATGA	2 cut(s)	772, 1915
CfoI	GCGC	1 cut(s)	1169
Cfr10I	RCCGGY	1 cut(s)	1340
Cfr42I	CCGCGG	1 cut(s)	2125
ClaI	ATCGAT	2 cut(s)	235, 1833
CseI	GACGC	2 cut(s)	430, 1642
Csp6I	GTAC	8 cut(s)	188, 705, 714, 961, 1065, 1302, 1700, 1743
CspAI	ACCGGT	1 cut(s)	1340
CspCI	CAANNNNNGTGG	2 cut(s)	1960, 1995
CviQI	GTAC	8 cut(s)	188, 705, 714, 961, 1065, 1302, 1700, 1743
DdeI	CTNAG	6 cut(s)	41, 318, 679, 1324, 1375, 2294
DinI	GGCGCC	1 cut(s)	1168
DraI	TTTAAA	1 cut(s)	1401
Eam1104I	CTCTTC	1 cut(s)	1386
EarI	CTCTTC	1 cut(s)	1386
Eco130I	CCWWGG	1 cut(s)	1517
Eco147I	AGGCCT	1 cut(s)	1732
Eco32I	GATATC	1 cut(s)	878
Eco47I	GGWCC	8 cut(s)	181, 1217, 1355, 1447, 1592, 1846, 2041, 2235
Eco57I	CTGAAG	1 cut(s)	1053
EcoNI	CCTNNNNNAGG	1 cut(s)	861
EcoO109I	RGGNCCY	1 cut(s)	2041
EcoRI	GAATTC	1 cut(s)	568
EcoRII	CCWGG	5 cut(s)	598, 695, 1351, 1569, 1732
EcoRV	GATATC	1 cut(s)	878
EcoT14I	CCWWGG	1 cut(s)	1517
EcoT22I	ATGCAT	1 cut(s)	246
EgeI	GGCGCC	1 cut(s)	1168
EheI	GGCGCC	1 cut(s)	1168
ErhI	CCWWGG	1 cut(s)	1517
Esp3I	CGTCTC	1 cut(s)	413
FalI	AAGNNNNNCTT	4 cut(s)	1402, 1434, 1589, 1621
FaqI	GGGAC	3 cut(s)	1188, 1230, 2221
FbaI	TGATCA	3 cut(s)	94, 1191, 2047
FblI	GTMKAC	1 cut(s)	656
Fnu4HI	GCNGC	3 cut(s)	1296, 2125, 2357
FokI	GGATG	7 cut(s)	253, 279, 449, 493, 983, 1441, 1793
Fsp4HI	GCNGC	3 cut(s)	1296, 2125, 2357
GlaI	GCGC	1 cut(s)	1168
GluI	GCNGC	3 cut(s)	1296, 2125, 2357
GsuI	CTGGAG	1 cut(s)	1110
HaeII	RGCGCY	1 cut(s)	1170
HaeIII	GGCC	3 cut(s)	5, 1732, 2058
HgaI	GACGC	2 cut(s)	430, 1642
HhaI	GCGC	1 cut(s)	1169
Hin1I	GRCGYC	1 cut(s)	1167
Hin6I	GCGC	1 cut(s)	1167
HinP1I	GCGC	1 cut(s)	1167
HincII	GTYRAC	3 cut(s)	117, 589, 1657
HindII	GTYRAC	3 cut(s)	117, 589, 1657
HindIII	AAGCTT	1 cut(s)	1901
HpaI	GTTAAC	1 cut(s)	589
HphI	GGTGA	6 cut(s)	26, 214, 614, 990, 1106, 2164
Hpy166II	GTNNAC	7 cut(s)	117, 589, 657, 990, 1544, 1657, 1702
Hpy8I	GTNNAC	7 cut(s)	117, 589, 657, 990, 1544, 1657, 1702
HpyAV	CCTTC	5 cut(s)	191, 513, 1357, 1792, 2140
HpyCH4III	ACNGT	4 cut(s)	260, 1586, 1784, 2017
HpyCH4IV	ACGT	1 cut(s)	707
HpyF10VI	GCNNNNNNNGC	4 cut(s)	901, 1304, 1667, 1827
HpyF3I	CTNAG	6 cut(s)	41, 318, 679, 1324, 1375, 2294
HpySE526I	ACGT	1 cut(s)	707
Hsp92I	GRCGYC	1 cut(s)	1167
HspAI	GCGC	1 cut(s)	1167
KasI	GGCGCC	1 cut(s)	1166
Ksp22I	TGATCA	3 cut(s)	94, 1191, 2047
KspAI	GTTAAC	1 cut(s)	589
KspI	CCGCGG	1 cut(s)	2125
LguI	GCTCTTC	1 cut(s)	1386
LmnI	GCTCC	2 cut(s)	152, 1430
Lsp1109I	GCAGC	1 cut(s)	1282
LweI	GCATC	8 cut(s)	118, 231, 241, 241, 764, 1249, 1839, 2064
MaeII	ACGT	1 cut(s)	707
MaeIII	GTNAC	4 cut(s)	602, 1150, 1882, 2212
MboII	GAAGA	8 cut(s)	152, 330, 714, 761, 1268, 1403, 1861, 2180
MfeI	CAATTG	1 cut(s)	354
MflI	RGATCY	2 cut(s)	398, 946
MhlI	GDGCHC	1 cut(s)	621
Mly113I	GGCGCC	1 cut(s)	1167
MlyI	GAGTC	6 cut(s)	55, 794, 815, 1337, 1380, 1906
MmeI	TCCRAC	5 cut(s)	444, 798, 948, 1824, 2306
Mph1103I	ATGCAT	1 cut(s)	246
MroXI	GAANNNNTTC	2 cut(s)	765, 1559
MseI	TTAA	6 cut(s)	588, 938, 1089, 1400, 1905, 2135
MslI	CAYNNNNRTG	1 cut(s)	249
MspA1I	CMGCKG	3 cut(s)	683, 932, 2124
MspR9I	CCNGG	8 cut(s)	600, 697, 914, 1353, 1571, 1734, 2055, 2165
MunI	CAATTG	1 cut(s)	354
Mva1269I	GAATGC	2 cut(s)	244, 827
MvaI	CCWGG	5 cut(s)	600, 697, 1353, 1571, 1734
MvnI	CGCG	1 cut(s)	2124
MwoI	GCNNNNNNNGC	4 cut(s)	901, 1304, 1667, 1827
NarI	GGCGCC	1 cut(s)	1167
NciI	CCSGG	3 cut(s)	914, 2055, 2165
NcoI	CCATGG	1 cut(s)	1517
NlaIV	GGNNCC	6 cut(s)	400, 1168, 1218, 1345, 2237, 2319
NmeAIII	GCCGAG	2 cut(s)	803, 1195
NmuCI	GTSAC	2 cut(s)	602, 1882
NsiI	ATGCAT	1 cut(s)	246
NspI	RCATGY	2 cut(s)	1233, 2213
NspV	TTCGAA	1 cut(s)	741
PagI	TCATGA	2 cut(s)	772, 1915
PceI	AGGCCT	1 cut(s)	1732
PciSI	GCTCTTC	1 cut(s)	1386
PctI	GAATGC	2 cut(s)	244, 827
PdmI	GAANNNNTTC	2 cut(s)	765, 1559
PfeI	GAWTC	7 cut(s)	271, 595, 719, 776, 909, 1774, 1835
PinAI	ACCGGT	1 cut(s)	1340
PkrI	GCNGC	3 cut(s)	1297, 2126, 2358
PleI	GAGTC	6 cut(s)	54, 793, 815, 1336, 1380, 1906
PluTI	GGCGCC	1 cut(s)	1170
PpsI	GAGTC	6 cut(s)	54, 793, 815, 1336, 1380, 1906
Ppu21I	YACGTR	1 cut(s)	708
PpuMI	RGGWCCY	1 cut(s)	2041
Psp5II	RGGWCCY	1 cut(s)	2041
Psp6I	CCWGG	5 cut(s)	598, 695, 1351, 1569, 1732
PspGI	CCWGG	5 cut(s)	598, 695, 1351, 1569, 1732
PspN4I	GGNNCC	6 cut(s)	400, 1168, 1218, 1345, 2237, 2319
PspPPI	RGGWCCY	1 cut(s)	2041
PstI	CTGCAG	1 cut(s)	643
PsuI	RGATCY	2 cut(s)	398, 946
PvuII	CAGCTG	2 cut(s)	683, 932
RsaI	GTAC	8 cut(s)	189, 706, 715, 962, 1066, 1303, 1701, 1744
RsaNI	GTAC	8 cut(s)	188, 705, 714, 961, 1065, 1302, 1700, 1743
RseI	CAYNNNNRTG	1 cut(s)	249
SacII	CCGCGG	1 cut(s)	2125
SapI	GCTCTTC	1 cut(s)	1386
SaqAI	TTAA	6 cut(s)	588, 938, 1089, 1400, 1905, 2135
SatI	GCNGC	3 cut(s)	1296, 2125, 2357
ScaI	AGTACT	2 cut(s)	1066, 1744
SchI	GAGTC	6 cut(s)	55, 794, 815, 1337, 1380, 1906
ScrFI	CCNGG	8 cut(s)	600, 697, 914, 1353, 1571, 1734, 2055, 2165
SduI	GDGCHC	1 cut(s)	621
SfaNI	GCATC	8 cut(s)	118, 231, 241, 241, 764, 1249, 1839, 2064
SfcI	CTRYAG	2 cut(s)	639, 1648
SfoI	GGCGCC	1 cut(s)	1168
Sfr303I	CCGCGG	1 cut(s)	2125
SfuI	TTCGAA	1 cut(s)	741
SgrBI	CCGCGG	1 cut(s)	2125
SinI	GGWCC	8 cut(s)	181, 1217, 1355, 1447, 1592, 1846, 2041, 2235
SmiMI	CAYNNNNRTG	1 cut(s)	249
SmlI	CTYRAG	1 cut(s)	2102
SmoI	CTYRAG	1 cut(s)	2102
SpeI	ACTAGT	1 cut(s)	524
SseBI	AGGCCT	1 cut(s)	1732
SsiI	CCGC	6 cut(s)	216, 746, 1670, 2122, 2124, 2357
SspDI	GGCGCC	1 cut(s)	1166
SspI	AATATT	2 cut(s)	631, 811
StuI	AGGCCT	1 cut(s)	1732
StyD4I	CCNGG	8 cut(s)	598, 695, 912, 1351, 1569, 1732, 2053, 2163
StyI	CCWWGG	1 cut(s)	1517
TaaI	ACNGT	4 cut(s)	260, 1586, 1784, 2017
TaiI	ACGT	1 cut(s)	710
TaqI	TCGA	8 cut(s)	235, 741, 849, 1389, 1747, 1833, 2037, 2070
TatI	WGTACW	3 cut(s)	187, 1064, 1742
TauI	GCSGC	2 cut(s)	2127, 2359
TfiI	GAWTC	7 cut(s)	271, 595, 719, 776, 909, 1774, 1835
Tru1I	TTAA	6 cut(s)	588, 938, 1089, 1400, 1905, 2135
Tru9I	TTAA	6 cut(s)	588, 938, 1089, 1400, 1905, 2135
TscAI	CASTG	8 cut(s)	30, 162, 648, 989, 1038, 1077, 1285, 2022
TseFI	GTSAC	2 cut(s)	602, 1882
TseI	GCWGC	1 cut(s)	1295
Tsp45I	GTSAC	2 cut(s)	602, 1882
TspGWI	ACGGA	2 cut(s)	358, 1417
TspRI	CASTG	8 cut(s)	30, 162, 648, 989, 1038, 1077, 1285, 2022
VpaK11BI	GGWCC	8 cut(s)	181, 1217, 1355, 1447, 1592, 1846, 2041, 2235
XagI	CCTNNNNNAGG	1 cut(s)	861
XapI	RAATTY	3 cut(s)	103, 568, 1010
XbaI	TCTAGA	2 cut(s)	953, 1441
XceI	RCATGY	2 cut(s)	1233, 2213
XcmI	CCANNNNNNNNNTGG	2 cut(s)	338, 412
XmiI	GTMKAC	1 cut(s)	656
XmnI	GAANNNNTTC	2 cut(s)	765, 1559
ZrmI	AGTACT	2 cut(s)	1066, 1744
Zsp2I	ATGCAT	1 cut(s)	246

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.