FvH4_5g15860

WSTF, HB1, Itc1p, MBD9 motif 1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0007850
Physical Location & Seq
Forward (+)
8974298 .. 8981074
6777 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g15860.t1

Sequence Viewer

Length: 2217 bp
ATGTCTCTCGACTCCTCTCCTCCGATCCCGTCCCACCGATCCTCGCCGGAACCCCAACCGCCTCAAAACGACGACGTCGCCGCCGCAACCACATCGGCTCCGGCACCCACTCCGCCGCTCTCCCGCAGCAACCGCCCCTCCCGCGCTTGCACCCTACGCGCCGCGGCCCGGCTTCAACAGCAGCAGCAGCAGCAGCAGTACCAGCAGCACGCGGAGCCGCGCAAGCCGAAAGCCGCGAAGAAGGAGCAGCAGCAGCAGGAGGAGAACGGCGAGTCGTCGTCGCCGCAGCAATGCGGCAGCGCCAGCAAGGTGGTGACGTCGCTGGTGGACCCGCCCACGCCGTCGCAATTGCCGCGCTGGACGCTCCGGTCCATGTGGGAGCTGGCCTCCGTCCTCAATTTCCTCCACGCTTTTCGGCCGCTTTTGAATATACAAGCTGAGTTCTCTGCCGAAGAATTGGAGACTGCTTTGATCACACCCAATGACAACTTGAGTGACATTCACATTCCCTTGTTGAAGGCGATTCCCCCTGTGACTAGAATGGCACTTACACGTGATACTTGGATCACTGTCTTATGCAGAAAGTTGAGAGACTGGTGGCATTGGGTTGCAGATGGGGATCTACCTATTGTTGCTTCACATGGGGCGGAGATTGAAGTATATAAAACACTTGATCCCGGTGTACGCGTGGTCATTTTGAAAGCACTTTGTGACATTCGTGTTGAGCAAGAAGATATCCGGAACTATATTGACAATTCACTGAAACATGGTGTCCAGCTTTCCACATTTCGTAAAGAACGTATTGGTGGTGATTCACAAGGAATCTCTTACTGGTATGAAGATGATCCAATAATTGGTTATCGGTTATATCGGGAGATAAGGAAGACTGAGGTGAAGAAAGTAAGAGTAAAGGGTTCCCATGTGCTTCCCAGTACAACATACCAGTGGGAAACAGTTGCAACCAATTTTGACGAATTTCAAGATGTTGGGGAAAAACTTTTCTCCAGTATCAATAGAACAGAGGCTGCTGTAGGAAAAAAGTTGAAAGGTGACATGCTTTTAGAGATTGAGAAGGTTCACAAGAGGAAAGAGAAGTTGCTGAAGAAGCAACATAGACAAGCTCTCCTCCTTGATAATTATGTGTCTGTGGATGGACTTGGTCCTGGGCGCTCTCTTCGTGACAGAAAACCTGTGACGTACACTTTTGATGATTATGACCGGTCAATCAATGAGGCCATCAAGATAACCAAAACGAAACAGCCATCCCCTGACCCTTTACAGAAACGAGATGTTATGAAACATGAAGCTTCTAGTAATGGTAAATGGAGTGATGCTTCAAATTCCCATGAGCATGTCGGATTCAGCCCCCTGTCTCCTAAATCACCTGATTACGAAGGCGAAGAAGATGATGTCGAGGAAGATGACACATCTGAACTTATGGATAGAAGCAATCGGCGAAGACAAAGGCCCCAACGGTATTCTGCAAAAGATTTTGTTGAAGCAGTTTCAGATAATGATGCAGACTTTGACAGTGATGATGAGATAGTTGGTGAAGCTATTTATGATGAAGAATACCTAAAGAAACGTAAGGAGAGAAGAAAGTTTTCTAGTAGTTCTGAAGGTGATGAGGAGTATCGTTGGGAGGAAGAAAATCCTGAAGAGGAGGAAGAGGAAGAAGAGGAAGATTCTGCAAGTGCCAGTGAGGAAAGTGATGAACCCCGGAAGTTTAAGAAACTGCGAGGTCGTCCTGAGGAATTGCCAGGACGTACTAGGAGGGAAGCTAAATTGCGGTCAGTTGGTGAGCTCCAGTCAGGTCTAAGACGCAGTAAGAGGGCCACCAGAAATCGCATTGATTATCGGCAGTTAGAGTTTTCAGATTCAGATACAGAGCCTATAAAACCCGAGAAGTCAAATGCATCAGATCAACACTCTGATGCAACTGAAAATGGTGACTATTCAATGGAAAGTCAAGATTCTGATGTTAATGATGGTCACCATGAAATGGAAGTTGGTCAGGCTGATCAGGCTGTTGAAAATTACCCTGAAGCAGTAGAGAAAGAAGAAAACCAGCCACCTGAAAAATCAAATAGCCCAGGGGAAAATGAAGTCGGAGGTGTACAGAAAAGACGTTTCCTTGACCTAAACGAACTTGCTCCTGGCTCAGGTTTTGATGATGGTCCAAATACGATTATGAAAGATGATGCGGATGATCTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DDT WHIM1

Protein Analysis

739

Amino Acids

83.99

Weight (kDa)

5.03

Isoelectric Point (pI)

62.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DDT PF02791 130 - 175 6.1e-06 DDT domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 367
AatII GACGTC 2 cut(s) 78, 320
AccB1I GGYRCC 1 cut(s) 103
AccB7I CCANNNNNTGG 2 cut(s) 854, 2002
AccBSI CCGCTC 1 cut(s) 118
AccII CGCG 8 cut(s) 144, 159, 164, 212, 220, 236, 355, 687
AccIII TCCGGA 1 cut(s) 738
AclWI GGATC 6 cut(s) 19, 33, 572, 627, 668, 839
AcoI YGGCCR 1 cut(s) 416
AcsI RAATTY 2 cut(s) 974, 1339
AcuI CTGAAG 4 cut(s) 1121, 1638, 1677, 2064
AcvI CACGTG 1 cut(s) 554
AcyI GRCGYC 2 cut(s) 75, 317
AdeI CACNNNGTG 1 cut(s) 710
AfaI GTAC 6 cut(s) 200, 684, 934, 1199, 1768, 2118
AfiI CCNNNNNNNGG 4 cut(s) 168, 854, 2002, 2162
AflIII ACRYGT 2 cut(s) 551, 685
AgeI ACCGGT 1 cut(s) 1218
AjnI CCWGG 4 cut(s) 1162, 1759, 2092, 2155
AjuI GAANNNNNNNTTGG 2 cut(s) 1992, 2024
AluBI AGCT 8 cut(s) 382, 437, 778, 1121, 1307, 1556, 1781, 1804
AluI AGCT 8 cut(s) 382, 437, 778, 1121, 1307, 1556, 1781, 1804
Alw21I GWGCWC 1 cut(s) 1806
Alw26I GTCTC 4 cut(s) 9, 455, 585, 1377
AlwI GGATC 6 cut(s) 19, 33, 572, 627, 668, 839
AlwNI CAGNNNCTG 1 cut(s) 1025
Ama87I CYCGRG 1 cut(s) 1901
Aor13HI TCCGGA 1 cut(s) 738
AoxI GGCC 6 cut(s) 165, 384, 416, 1233, 1466, 1833
ApoI RAATTY 2 cut(s) 974, 1339
AsiGI ACCGGT 1 cut(s) 1218
Asp700I GAANNNNTTC 1 cut(s) 1603
AspLEI GCGC 6 cut(s) 146, 161, 222, 302, 357, 1170
AspS9I GGNCC 7 cut(s) 166, 328, 369, 1160, 1467, 1833, 2177
AsuC2I CCSGG 3 cut(s) 169, 678, 1720
AvaI CYCGRG 1 cut(s) 1901
AvaII GGWCC 4 cut(s) 328, 369, 1160, 2177
AxyI CCTNAGG 1 cut(s) 1749
BanI GGYRCC 1 cut(s) 103
BanII GRGCYC 1 cut(s) 1806
BbrPI CACGTG 1 cut(s) 554
BbsI GAAGAC 2 cut(s) 890, 1465
Bbv12I GWGCWC 1 cut(s) 1806
BccI CCATC 6 cut(s) 608, 1145, 1244, 1270, 1982, 2168
BceAI ACGGC 2 cut(s) 283, 325
BcgI CGANNNNNNTGC 2 cut(s) 75, 109
BciT130I CCWGG 4 cut(s) 1164, 1761, 2094, 2157
BclI TGATCA 2 cut(s) 471, 2020
BcnI CCSGG 3 cut(s) 169, 678, 1720
BcoDI GTCTC 4 cut(s) 9, 455, 585, 1377
BfaI CTAG 4 cut(s) 537, 1311, 1608, 1770
BfmI CTRYAG 1 cut(s) 1029
BfoI RGCGCY 2 cut(s) 303, 1171
Bme1390I CCNGG 7 cut(s) 169, 678, 1164, 1720, 1761, 2094, 2157
Bme18I GGWCC 4 cut(s) 328, 369, 1160, 2177
BmeT110I CYCGRG 1 cut(s) 1901
BmgT120I GGNCC 7 cut(s) 166, 328, 369, 1160, 1467, 1833, 2177
BmiI GGNNCC 7 cut(s) 51, 99, 105, 216, 330, 916, 1469
BmrFI CCNGG 7 cut(s) 169, 678, 1164, 1720, 1761, 2094, 2157
BmrI ACTGGG 1 cut(s) 924
BmsI GCATC 5 cut(s) 1321, 1507, 1924, 1925, 2191
BmuI ACTGGG 1 cut(s) 924
BpiI GAAGAC 2 cut(s) 890, 1465
BplI GAGNNNNNCTC 2 cut(s) 371, 403
BpmI CTGGAG 2 cut(s) 988, 1790
Bpu10I CCTNAGC 1 cut(s) 2161
BpuEI CTTGAG 1 cut(s) 511
BpuMI CCSGG 3 cut(s) 169, 678, 1720
BsaAI YACGTR 1 cut(s) 554
BsaBI GATNNNNATC 1 cut(s) 618
BsaHI GRCGYC 2 cut(s) 75, 317
BsaJI CCNNGG 5 cut(s) 162, 1163, 1718, 2092, 2093
BsaWI WCCGGW 3 cut(s) 366, 738, 1218
BsaXI ACNNNNNCTCC 6 cut(s) 82, 112, 122, 152, 1107, 1137
Bsc4I CCNNNNNNNGG 4 cut(s) 168, 854, 2002, 2162
Bse118I RCCGGY 1 cut(s) 1218
Bse1I ACTGG 7 cut(s) 599, 836, 930, 943, 1005, 1698, 1807
Bse21I CCTNAGG 1 cut(s) 1749
Bse3DI GCAATG 1 cut(s) 296
Bse8I GATNNNNATC 1 cut(s) 618
BseAI TCCGGA 1 cut(s) 738
BseBI CCWGG 4 cut(s) 1164, 1761, 2094, 2157
BseDI CCNNGG 5 cut(s) 162, 1163, 1718, 2092, 2093
BseGI GGATG 3 cut(s) 1156, 1262, 2212
BseJI GATNNNNATC 1 cut(s) 618
BseLI CCNNNNNNNGG 4 cut(s) 168, 854, 2002, 2162
BseMI GCAATG 1 cut(s) 296
BseMII CTCAG 4 cut(s) 429, 879, 1740, 2175
BseNI ACTGG 7 cut(s) 599, 836, 930, 943, 1005, 1698, 1807
BseRI GAGGAG 6 cut(s) 4, 9, 275, 1115, 1643, 1676
BseX3I CGGCCG 1 cut(s) 416
Bsh1236I CGCG 8 cut(s) 144, 159, 164, 212, 220, 236, 355, 687
Bsh1285I CGRYCG 1 cut(s) 419
BshFI GGCC 6 cut(s) 167, 386, 418, 1235, 1468, 1835
BshNI GGYRCC 1 cut(s) 103
BshTI ACCGGT 1 cut(s) 1218
BsiEI CGRYCG 1 cut(s) 419
BsiHKAI GWGCWC 1 cut(s) 1806
BsiHKCI CYCGRG 1 cut(s) 1901
BsiSI CCGG 8 cut(s) 47, 101, 169, 367, 678, 739, 1219, 1720
BslFI GGGAC 1 cut(s) 16
BslI CCNNNNNNNGG 4 cut(s) 168, 854, 2002, 2162
BsmAI GTCTC 4 cut(s) 9, 455, 585, 1377
BsmFI GGGAC 1 cut(s) 16
BsnI GGCC 6 cut(s) 167, 386, 418, 1235, 1468, 1835
BsoBI CYCGRG 1 cut(s) 1901
Bsp1286I GDGCHC 1 cut(s) 1806
Bsp13I TCCGGA 1 cut(s) 738
Bsp1407I TGTACA 1 cut(s) 2116
BspANI GGCC 6 cut(s) 167, 386, 418, 1235, 1468, 1835
BspCNI CTCAG 4 cut(s) 430, 880, 1741, 2174
BspEI TCCGGA 1 cut(s) 738
BspFNI CGCG 8 cut(s) 144, 159, 164, 212, 220, 236, 355, 687
BspLI GGNNCC 7 cut(s) 51, 99, 105, 216, 330, 916, 1469
BspPI GGATC 6 cut(s) 19, 33, 572, 627, 668, 839
BspT107I GGYRCC 1 cut(s) 103
BsrBI CCGCTC 1 cut(s) 118
BsrDI GCAATG 1 cut(s) 296
BsrFI RCCGGY 1 cut(s) 1218
BsrGI TGTACA 1 cut(s) 2116
BsrI ACTGG 7 cut(s) 599, 836, 930, 943, 1005, 1698, 1807
BssAI RCCGGY 1 cut(s) 1218
BssECI CCNNGG 5 cut(s) 162, 1163, 1718, 2092, 2093
BssNI GRCGYC 2 cut(s) 75, 317
Bst2UI CCWGG 4 cut(s) 1164, 1761, 2094, 2157
Bst4CI ACNGT 4 cut(s) 571, 955, 1476, 1532
Bst6I CTCTTC 4 cut(s) 1179, 1653, 1662, 1671
BstACI GRCGYC 2 cut(s) 75, 317
BstAUI TGTACA 1 cut(s) 2116
BstBAI YACGTR 1 cut(s) 554
BstC8I GCNNGC 5 cut(s) 148, 210, 224, 304, 384
BstDEI CTNAG 5 cut(s) 438, 888, 1749, 1817, 2161
BstDSI CCRYGG 1 cut(s) 162
BstEII GGTNACC 1 cut(s) 1991
BstENI CCTNNNNNAGG 1 cut(s) 2160
BstF5I GGATG 3 cut(s) 1156, 1262, 2212
BstFNI CGCG 8 cut(s) 144, 159, 164, 212, 220, 236, 355, 687
BstH2I RGCGCY 2 cut(s) 303, 1171
BstHHI GCGC 6 cut(s) 146, 161, 222, 302, 357, 1170
BstMAI GTCTC 4 cut(s) 9, 455, 585, 1377
BstMCI CGRYCG 1 cut(s) 419
BstNI CCWGG 4 cut(s) 1164, 1761, 2094, 2157
BstNSI RCATGY 2 cut(s) 1057, 1355
BstPI GGTNACC 1 cut(s) 1991
BstSCI CCNGG 7 cut(s) 167, 676, 1162, 1718, 1759, 2092, 2155
BstSFI CTRYAG 1 cut(s) 1029
BstUI CGCG 8 cut(s) 144, 159, 164, 212, 220, 236, 355, 687
BstV2I GAAGAC 2 cut(s) 890, 1465
BstX2I RGATCY 1 cut(s) 619
BstXI CCANNNNNNTGG 1 cut(s) 310
BstYI RGATCY 1 cut(s) 619
BstZI CGGCCG 1 cut(s) 416
Bsu36I CCTNAGG 1 cut(s) 1749
BsuRI GGCC 6 cut(s) 167, 386, 418, 1235, 1468, 1835
BtgI CCRYGG 1 cut(s) 162
BtsCI GGATG 3 cut(s) 1156, 1262, 2212
BtsIMutI CAGTG 5 cut(s) 567, 758, 950, 1537, 1705
Cac8I GCNNGC 5 cut(s) 148, 210, 224, 304, 384
CaiI CAGNNNCTG 1 cut(s) 1025
CfoI GCGC 6 cut(s) 146, 161, 222, 302, 357, 1170
Cfr10I RCCGGY 1 cut(s) 1218
Cfr13I GGNCC 7 cut(s) 166, 328, 369, 1160, 1467, 1833, 2177
Cfr42I CCGCGG 1 cut(s) 165
CseI GACGC 2 cut(s) 370, 1830
Csp6I GTAC 6 cut(s) 199, 683, 933, 1198, 1767, 2117
CspAI ACCGGT 1 cut(s) 1218
CviAII CATG 9 cut(s) 373, 641, 767, 920, 1054, 1301, 1346, 1352, 1997
CviQI GTAC 6 cut(s) 199, 683, 933, 1198, 1767, 2117
DdeI CTNAG 5 cut(s) 438, 888, 1749, 1817, 2161
DraIII CACNNNGTG 1 cut(s) 710
DrdI GACNNNNNNGTC 1 cut(s) 367
DseDI GACNNNNNNGTC 1 cut(s) 367
EaeI YGGCCR 1 cut(s) 416
EagI CGGCCG 1 cut(s) 416
Eam1104I CTCTTC 4 cut(s) 1179, 1653, 1662, 1671
EarI CTCTTC 4 cut(s) 1179, 1653, 1662, 1671
EciI GGCGGA 2 cut(s) 102, 662
Ecl136II GAGCTC 1 cut(s) 1804
EclXI CGGCCG 1 cut(s) 416
Eco24I GRGCYC 1 cut(s) 1806
Eco32I GATATC 1 cut(s) 736
Eco47I GGWCC 4 cut(s) 328, 369, 1160, 2177
Eco52I CGGCCG 1 cut(s) 416
Eco53kI GAGCTC 1 cut(s) 1804
Eco57I CTGAAG 4 cut(s) 1121, 1638, 1677, 2064
Eco72I CACGTG 1 cut(s) 554
Eco81I CCTNAGG 1 cut(s) 1749
Eco88I CYCGRG 1 cut(s) 1901
Eco91I GGTNACC 1 cut(s) 1991
EcoICRI GAGCTC 1 cut(s) 1804
EcoNI CCTNNNNNAGG 1 cut(s) 2160
EcoO109I RGGNCCY 1 cut(s) 1467
EcoO65I GGTNACC 1 cut(s) 1991
EcoRII CCWGG 4 cut(s) 1162, 1759, 2092, 2155
EcoRV GATATC 1 cut(s) 736
EcoT22I ATGCAT 1 cut(s) 1918
EcoT38I GRGCYC 1 cut(s) 1806
FaeI CATG 9 cut(s) 376, 644, 770, 923, 1057, 1304, 1349, 1355, 2000
FaqI GGGAC 1 cut(s) 16
FatI CATG 9 cut(s) 372, 640, 766, 919, 1053, 1300, 1345, 1351, 1996
FauI CCCGC 3 cut(s) 131, 149, 339
FbaI TGATCA 2 cut(s) 471, 2020
FokI GGATG 2 cut(s) 1163, 1249
FriOI GRGCYC 1 cut(s) 1806
FspBI CTAG 4 cut(s) 537, 1311, 1608, 1770
GlaI GCGC 6 cut(s) 145, 160, 221, 301, 356, 1169
GsuI CTGGAG 2 cut(s) 988, 1790
HaeII RGCGCY 2 cut(s) 303, 1171
HaeIII GGCC 6 cut(s) 167, 386, 418, 1235, 1468, 1835
HapII CCGG 8 cut(s) 47, 101, 169, 367, 678, 739, 1219, 1720
HgaI GACGC 2 cut(s) 370, 1830
HhaI GCGC 6 cut(s) 146, 161, 222, 302, 357, 1170
Hin1I GRCGYC 2 cut(s) 75, 317
Hin1II CATG 9 cut(s) 376, 644, 770, 923, 1057, 1304, 1349, 1355, 2000
Hin6I GCGC 6 cut(s) 144, 159, 220, 300, 355, 1168
HinP1I GCGC 6 cut(s) 144, 159, 220, 300, 355, 1168
HindIII AAGCTT 1 cut(s) 1305
HinfI GANTC 9 cut(s) 11, 272, 523, 812, 822, 1359, 1685, 1877, 1973
HpaII CCGG 8 cut(s) 47, 101, 169, 367, 678, 739, 1219, 1720
Hpy166II GTNNAC 5 cut(s) 328, 683, 1078, 1200, 2117
Hpy188III TCNNGA 9 cut(s) 8, 739, 872, 980, 1178, 1240, 1655, 1748, 1970
Hpy8I GTNNAC 5 cut(s) 328, 683, 1078, 1200, 2117
Hpy99I CGWCG 7 cut(s) 74, 77, 80, 280, 283, 322, 346
HpyAV CCTTC 5 cut(s) 235, 511, 1066, 1388, 1613
HpyCH4III ACNGT 4 cut(s) 571, 955, 1476, 1532
HpyCH4IV ACGT 8 cut(s) 75, 317, 553, 799, 1196, 1585, 1765, 2128
HpyCH4V TGCA 9 cut(s) 150, 579, 611, 959, 1484, 1520, 1691, 1916, 1937
HpyF3I CTNAG 5 cut(s) 438, 888, 1749, 1817, 2161
HpySE526I ACGT 8 cut(s) 75, 317, 553, 799, 1196, 1585, 1765, 2128
Hsp92I GRCGYC 2 cut(s) 75, 317
Hsp92II CATG 9 cut(s) 376, 644, 770, 923, 1057, 1304, 1349, 1355, 2000
HspAI GCGC 6 cut(s) 144, 159, 220, 300, 355, 1168
Kpn2I TCCGGA 1 cut(s) 738
Ksp22I TGATCA 2 cut(s) 471, 2020
KspI CCGCGG 1 cut(s) 165
LmnI GCTCC 7 cut(s) 103, 214, 244, 369, 379, 1809, 2158
LweI GCATC 5 cut(s) 1321, 1507, 1924, 1925, 2191
MaeI CTAG 4 cut(s) 537, 1311, 1608, 1770
MaeII ACGT 8 cut(s) 75, 317, 553, 799, 1196, 1585, 1765, 2128
MaeIII GTNAC 9 cut(s) 313, 494, 532, 710, 1049, 1178, 1192, 1949, 1991
MbiI CCGCTC 1 cut(s) 118
MfeI CAATTG 1 cut(s) 347
MflI RGATCY 1 cut(s) 619
MhlI GDGCHC 1 cut(s) 1806
MluI ACGCGT 1 cut(s) 685
MlyI GAGTC 2 cut(s) 5, 281
MmeI TCCRAC 2 cut(s) 1336, 2089
Mph1103I ATGCAT 1 cut(s) 1918
MroI TCCGGA 1 cut(s) 738
MroXI GAANNNNTTC 1 cut(s) 1603
MseI TTAA 2 cut(s) 1728, 1983
MslI CAYNNNNRTG 3 cut(s) 943, 1350, 1932
MspA1I CMGCKG 1 cut(s) 164
MspI CCGG 8 cut(s) 47, 101, 169, 367, 678, 739, 1219, 1720
MspR9I CCNGG 7 cut(s) 169, 678, 1164, 1720, 1761, 2094, 2157
MunI CAATTG 1 cut(s) 347
MvaI CCWGG 4 cut(s) 1164, 1761, 2094, 2157
MvnI CGCG 8 cut(s) 144, 159, 164, 212, 220, 236, 355, 687
NciI CCSGG 3 cut(s) 169, 678, 1720
NlaIII CATG 9 cut(s) 376, 644, 770, 923, 1057, 1304, 1349, 1355, 2000
NlaIV GGNNCC 7 cut(s) 51, 99, 105, 216, 330, 916, 1469
NmuCI GTSAC 9 cut(s) 313, 494, 532, 710, 1049, 1178, 1192, 1949, 1991
NsiI ATGCAT 1 cut(s) 1918
NspI RCATGY 2 cut(s) 1057, 1355
PasI CCCWGGG 1 cut(s) 2093
PcsI WCGNNNNNNNCGW 1 cut(s) 796
PdmI GAANNNNTTC 1 cut(s) 1603
PfeI GAWTC 7 cut(s) 523, 812, 822, 1359, 1685, 1877, 1973
PflFI GACNNNGTC 2 cut(s) 74, 1158
PflMI CCANNNNNTGG 2 cut(s) 854, 2002
PinAI ACCGGT 1 cut(s) 1218
PleI GAGTC 2 cut(s) 5, 280
PmaCI CACGTG 1 cut(s) 554
PmlI CACGTG 1 cut(s) 554
PpsI GAGTC 2 cut(s) 5, 280
Ppu21I YACGTR 1 cut(s) 554
Psp124BI GAGCTC 1 cut(s) 1806
Psp6I CCWGG 4 cut(s) 1162, 1759, 2092, 2155
PspCI CACGTG 1 cut(s) 554
PspEI GGTNACC 1 cut(s) 1991
PspGI CCWGG 4 cut(s) 1162, 1759, 2092, 2155
PspN4I GGNNCC 7 cut(s) 51, 99, 105, 216, 330, 916, 1469
PspPI GGNCC 7 cut(s) 166, 328, 369, 1160, 1467, 1833, 2177
PstNI CAGNNNCTG 1 cut(s) 1025
PsuI RGATCY 1 cut(s) 619
PsyI GACNNNGTC 2 cut(s) 74, 1158
RsaI GTAC 6 cut(s) 200, 684, 934, 1199, 1768, 2118
RsaNI GTAC 6 cut(s) 199, 683, 933, 1198, 1767, 2117
RseI CAYNNNNRTG 3 cut(s) 943, 1350, 1932
SacI GAGCTC 1 cut(s) 1806
SacII CCGCGG 1 cut(s) 165
SaqAI TTAA 2 cut(s) 1728, 1983
Sau96I GGNCC 7 cut(s) 166, 328, 369, 1160, 1467, 1833, 2177
SchI GAGTC 2 cut(s) 5, 281
ScrFI CCNGG 7 cut(s) 169, 678, 1164, 1720, 1761, 2094, 2157
SduI GDGCHC 1 cut(s) 1806
SfaNI GCATC 5 cut(s) 1321, 1507, 1924, 1925, 2191
SfcI CTRYAG 1 cut(s) 1029
Sfr303I CCGCGG 1 cut(s) 165
SgrBI CCGCGG 1 cut(s) 165
SinI GGWCC 4 cut(s) 328, 369, 1160, 2177
SmiMI CAYNNNNRTG 3 cut(s) 943, 1350, 1932
SmlI CTYRAG 1 cut(s) 490
SmoI CTYRAG 1 cut(s) 490
SspMI CTAG 4 cut(s) 537, 1311, 1608, 1770
SstI GAGCTC 1 cut(s) 1806
StyD4I CCNGG 7 cut(s) 167, 676, 1162, 1718, 1759, 2092, 2155
TaaI ACNGT 4 cut(s) 571, 955, 1476, 1532
TaiI ACGT 8 cut(s) 78, 320, 556, 802, 1199, 1588, 1768, 2131
TaqI TCGA 2 cut(s) 9, 1413
TatI WGTACW 2 cut(s) 932, 2116
TfiI GAWTC 7 cut(s) 523, 812, 822, 1359, 1685, 1877, 1973
Tru1I TTAA 2 cut(s) 1728, 1983
Tru9I TTAA 2 cut(s) 1728, 1983
TscAI CASTG 5 cut(s) 574, 765, 950, 1537, 1705
TseFI GTSAC 9 cut(s) 313, 494, 532, 710, 1049, 1178, 1192, 1949, 1991
Tsp45I GTSAC 9 cut(s) 313, 494, 532, 710, 1049, 1178, 1192, 1949, 1991
TspDTI ATGAA 8 cut(s) 852, 1310, 1317, 1581, 1728, 2013, 2118, 2207
TspGWI ACGGA 1 cut(s) 379
TspRI CASTG 5 cut(s) 574, 765, 950, 1537, 1705
Tth111I GACNNNGTC 2 cut(s) 74, 1158
Van91I CCANNNNNTGG 2 cut(s) 854, 2002
VpaK11BI GGWCC 4 cut(s) 328, 369, 1160, 2177
XagI CCTNNNNNAGG 1 cut(s) 2160
XapI RAATTY 2 cut(s) 974, 1339
XceI RCATGY 2 cut(s) 1057, 1355
XcmI CCANNNNNNNNNTGG 1 cut(s) 379
XmnI GAANNNNTTC 1 cut(s) 1603
XspI CTAG 4 cut(s) 537, 1311, 1608, 1770
ZraI GACGTC 2 cut(s) 76, 318
Zsp2I ATGCAT 1 cut(s) 1918
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.