RLG00000005283

WSTF, HB1, Itc1p, MBD9 motif 1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0007850
Physical Location & Seq
Forward (+)
66515092 .. 66520627
5536 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000005283

Sequence Viewer

Length: 2241 bp
ATGTCTCTCGAGTCTTCTCCTCCGATCCCGTCCGACCGATCCTCGCCGGAACCCCAACAACCACCACAACCCCCTCAAAACGACGACGTCGCGGCCACAACGACAACGACAACGACAAAGACATCGTCAACAGCCCCGGCCCCCACGCCGCCGCCGCTGTCCCGCAGCAACCGCCCCTCCCGCGCTTGCACCCTACGCGCCGCGGCTAGGTTGCAGCAGCAGCAGCAGCACGCCGAGCCGAGGAAGCCGAAGGCGGCGAGGAAGGAGCAGCAGCCGCAGCAGGAGAACGACGAGTCGTCGTCGCCGCAGCAATGCGGGAGCGCCAGCAAGATCGTGACGTCGCTGGTGGACCCGCCCTCGCCGTCGCAATTGCCTCGGTGGACGCTCCGGTCCATGTGGGAATTGGCCTCCGTGCTCAATTTTCTACATGCTTTTCGGCCGCTGTTGAATATACATGCCGAGTTCTCGGCTGAGGAATTGGAGACTGCTTTGATCACACCCAATGATAGCTTGAGTGACATTCACATTCCCTTGTTGAAGGCGATTCCCCCTGTGACGAGAATGGCACTTACACGTGATACTTGGATAACTGTTTTATGCAGAAAGTTGAGAGACTGGTGGCATTGGGTTGCAGATGGAGATCTACCTATTGTTGCTTCACATGGGGCGGAGGTTGAAGTATATAAAACACTTGATCCTGGTGTCCGTGTGGTCATTTTGAAAGCACTTTGTGATATTCGTGTTGAGCAAGAGGATATCCGGAACTATATTGACAATTCACTGAAACATGGCGTCCAGCTTTCCACATTTCGTAAAGAACGCCTTGGGGGTGATTCACATGGAATCTCTTACTGGTATGAAGATGATCCAATTATTGGTTATCGGTTATATCGGGAGATAAGGAAGACTGAGGTGAAGAAAGTTAGAGCAAAGGGTTCCCATGTCCTTCCTAGTACAACATATCAGTGGGAAACAGTTGCAACCAATTTTGATGAATTTCAAGATGTTGGAGAAAAACTTTTCTCCAGTATCAATAGAACAGAGGCTGCTGTAGGAAAAAAGTTGAAAGGTGACATGCTTTTAGAGATTGAGAAGGTTCACAAGAGGAAAGAGAAGTTGCTGAAGAAGCAACACAGACAAGCTCTACTCCTTGATAATTATGTGTCTGTGGATGGGCTTGGTCCGGGGCGCTCTCTTCGTGACAGAAAACCTGTCACATACACTTTTGATGATTATGACCGGTCAATCAATGAGGCCATCAAGATAACCAAAACGAAACAGCCATCCCCTGAGCCTTTACAGAAACGAGATGTTGTTATGAAACATGAAGCTTCTAGCAATGGTAAATGGAGTGGTACTTCAAATTCCCATGAGCATGTGGGATTTAGCCCTCTGTCTCCTAAATCACCTGATTACGAAGACGAAGAAGATGATGTCGAGGAAGACGACAAATCTGAACAAATGGATAGAAGCAATCGGCGAAGACAGAGGCCCCAACGGTATTCTGCAAAAGAATTTGTTGAAGCAGTTTCAGATAATGATGCAGACTTTGACAGTGATGATGAAATAGTTGGTGAAGCTATTTATGATGAAGAATACTTAAAGAAACGTAAGGAGAGGAGAAAGTTTTCTAGTAGCTCTGAAGGAGATGAGGAGTATCGTTGGGAGGAAGAAAATCCTGAAGAGGAGGAAGAGGAGGAAGAAGAAGATTCTGCTAGTGCCAGTGAGGAAAGTGATGAACCTCGAAAGTTTAAGAAACTGCGCGGTCGTCCTAAGGAATTGCCAGGACGTACTAGGAGGGAAGCTAAATTGAGGTCGGTTGATGAGCTTCAGTCAGGTCTAAGACGCAGTAAGAGGGCCACCAGAAATCGTATTGATTATCGGCAGTATGAGTTTTCAGATTCAGATACAGAGCCTATGAAACCTGAGAAGTCAAATGCATCAGATCGACACTCTGATGCAACTGAGAATGGTGACTATTCAATGGAAAGTCAAGATTCAGATGTTAATGATGGTCACCATGAAATGGAAGTAGGTCAGGCTGATCAGGCTGTTGAAAATTACCCAGAAACAGTAGAAAAAGAGGAAAACCAGCCACCTGAAAAATCAAATAGCCCAGGGGAAAATGAAGTCGGAGGTGTACAGAAAAGACGTTTCCTTGACCTAAACGAACTTGCCCCTGGTTCAGGTTTCGAGGATGGTCCAAATACGATAATGAAAGATGATGCGGATGATTTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DDT WHIM1

Protein Analysis

747

Amino Acids

84.98

Weight (kDa)

5.12

Isoelectric Point (pI)

63.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DDT PF02791 137 - 182 4.7e-06 DDT domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 388
AatII GACGTC 2 cut(s) 90, 341
AccB7I CCANNNNNTGG 2 cut(s) 875, 2026
AccII CGCG 5 cut(s) 92, 183, 198, 203, 1764
AccIII TCCGGA 1 cut(s) 759
AclWI GGATC 4 cut(s) 19, 33, 689, 860
AcoI YGGCCR 2 cut(s) 93, 437
AcsI RAATTY 3 cut(s) 995, 1363, 1514
AcuI CTGAAG 4 cut(s) 1142, 1662, 1701, 1814
AcvI CACGTG 1 cut(s) 575
AcyI GRCGYC 3 cut(s) 87, 338, 792
AdeI CACNNNGTG 1 cut(s) 731
AfaI GTAC 4 cut(s) 955, 1357, 1792, 2142
AfiI CCNNNNNNNGG 5 cut(s) 207, 240, 875, 2026, 2186
AflIII ACRYGT 1 cut(s) 572
AgeI ACCGGT 1 cut(s) 1239
AhdI GACNNNNNGTC 1 cut(s) 295
AjnI CCWGG 4 cut(s) 697, 1783, 2116, 2179
AluBI AGCT 8 cut(s) 510, 799, 1142, 1331, 1580, 1638, 1805, 1828
AluI AGCT 8 cut(s) 510, 799, 1142, 1331, 1580, 1638, 1805, 1828
Alw21I GWGCWC 1 cut(s) 417
Alw26I GTCTC 4 cut(s) 9, 476, 606, 1401
AlwI GGATC 4 cut(s) 19, 33, 689, 860
AlwNI CAGNNNCTG 1 cut(s) 1046
Ama87I CYCGRG 1 cut(s) 8
Aor13HI TCCGGA 1 cut(s) 759
AoxI GGCC 7 cut(s) 93, 138, 405, 437, 1254, 1490, 1857
ApoI RAATTY 3 cut(s) 995, 1363, 1514
ArsI GACNNNNNNTTYG 2 cut(s) 110, 142
AsiGI ACCGGT 1 cut(s) 1239
Asp700I GAANNNNTTC 1 cut(s) 1627
AspLEI GCGC 5 cut(s) 185, 200, 323, 1191, 1764
AspS9I GGNCC 7 cut(s) 139, 349, 390, 1181, 1491, 1857, 2201
AsuC2I CCSGG 2 cut(s) 137, 1185
AsuHPI GGTGA 7 cut(s) 842, 925, 1082, 1398, 1586, 1985, 2009
AvaI CYCGRG 1 cut(s) 8
AvaII GGWCC 4 cut(s) 349, 390, 1181, 2201
AxyI CCTNAGG 1 cut(s) 1773
BbrPI CACGTG 1 cut(s) 575
BbsI GAAGAC 5 cut(s) 6, 911, 1425, 1449, 1489
Bbv12I GWGCWC 1 cut(s) 417
BbvCI CCTCAGC 1 cut(s) 471
BccI CCATC 6 cut(s) 629, 1166, 1265, 1291, 2006, 2192
BceAI ACGGC 1 cut(s) 346
BcgI CGANNNNNNTGC 2 cut(s) 356, 390
BciT130I CCWGG 4 cut(s) 699, 1785, 2118, 2181
BclI TGATCA 2 cut(s) 492, 2044
BcnI CCSGG 2 cut(s) 137, 1185
BcoDI GTCTC 4 cut(s) 9, 476, 606, 1401
BfaI CTAG 6 cut(s) 207, 951, 1335, 1632, 1716, 1794
BfmI CTRYAG 1 cut(s) 1050
BfoI RGCGCY 2 cut(s) 324, 1192
BglII AGATCT 1 cut(s) 640
Bme1390I CCNGG 6 cut(s) 137, 699, 1185, 1785, 2118, 2181
Bme18I GGWCC 4 cut(s) 349, 390, 1181, 2201
BmeRI GACNNNNNGTC 1 cut(s) 295
BmeT110I CYCGRG 1 cut(s) 8
BmgT120I GGNCC 7 cut(s) 139, 349, 390, 1181, 1491, 1857, 2201
BmiI GGNNCC 5 cut(s) 51, 141, 351, 937, 1493
BmrFI CCNGG 6 cut(s) 137, 699, 1185, 1785, 2118, 2181
BmsI GCATC 4 cut(s) 1531, 1948, 1949, 2215
BpiI GAAGAC 5 cut(s) 6, 911, 1425, 1449, 1489
BpmI CTGGAG 1 cut(s) 1009
Bpu10I CCTNAGC 2 cut(s) 471, 1290
BpuEI CTTGAG 1 cut(s) 532
BpuMI CCSGG 2 cut(s) 137, 1185
BsaAI YACGTR 1 cut(s) 575
BsaBI GATNNNNATC 1 cut(s) 639
BsaHI GRCGYC 3 cut(s) 87, 338, 792
BsaJI CCNNGG 9 cut(s) 135, 201, 239, 374, 823, 1184, 2116, 2117, 2179
BsaWI WCCGGW 3 cut(s) 387, 759, 1239
BsaXI ACNNNNNCTCC 2 cut(s) 161, 191
Bsc4I CCNNNNNNNGG 5 cut(s) 207, 240, 875, 2026, 2186
Bse118I RCCGGY 1 cut(s) 1239
Bse1I ACTGG 4 cut(s) 620, 857, 1026, 1722
Bse21I CCTNAGG 1 cut(s) 1773
Bse3DI GCAATG 2 cut(s) 317, 1345
Bse8I GATNNNNATC 1 cut(s) 639
BseAI TCCGGA 1 cut(s) 759
BseBI CCWGG 4 cut(s) 699, 1785, 2118, 2181
BseDI CCNNGG 9 cut(s) 135, 201, 239, 374, 823, 1184, 2116, 2117, 2179
BseGI GGATG 4 cut(s) 1177, 1283, 2203, 2236
BseJI GATNNNNATC 1 cut(s) 639
BseLI CCNNNNNNNGG 5 cut(s) 207, 240, 875, 2026, 2186
BseMI GCAATG 2 cut(s) 317, 1345
BseMII CTCAG 5 cut(s) 462, 900, 1281, 1917, 1956
BseNI ACTGG 4 cut(s) 620, 857, 1026, 1722
BseRI GAGGAG 5 cut(s) 9, 1633, 1667, 1700, 1709
BseX3I CGGCCG 1 cut(s) 437
Bsh1236I CGCG 5 cut(s) 92, 183, 198, 203, 1764
Bsh1285I CGRYCG 3 cut(s) 37, 440, 1768
BshFI GGCC 7 cut(s) 95, 140, 407, 439, 1256, 1492, 1859
BshTI ACCGGT 1 cut(s) 1239
BsiEI CGRYCG 3 cut(s) 37, 440, 1768
BsiHKAI GWGCWC 1 cut(s) 417
BsiHKCI CYCGRG 1 cut(s) 8
BsiSI CCGG 6 cut(s) 47, 137, 388, 760, 1184, 1240
BslFI GGGAC 1 cut(s) 145
BslI CCNNNNNNNGG 5 cut(s) 207, 240, 875, 2026, 2186
BsmAI GTCTC 4 cut(s) 9, 476, 606, 1401
BsmFI GGGAC 1 cut(s) 145
BsnI GGCC 7 cut(s) 95, 140, 407, 439, 1256, 1492, 1859
BsoBI CYCGRG 1 cut(s) 8
Bsp1286I GDGCHC 1 cut(s) 417
Bsp13I TCCGGA 1 cut(s) 759
Bsp1407I TGTACA 1 cut(s) 2140
Bsp143I GATC 9 cut(s) 24, 38, 330, 492, 640, 694, 865, 1945, 2044
BspANI GGCC 7 cut(s) 95, 140, 407, 439, 1256, 1492, 1859
BspCNI CTCAG 5 cut(s) 463, 901, 1282, 1918, 1957
BspEI TCCGGA 1 cut(s) 759
BspFNI CGCG 5 cut(s) 92, 183, 198, 203, 1764
BspLI GGNNCC 5 cut(s) 51, 141, 351, 937, 1493
BspPI GGATC 4 cut(s) 19, 33, 689, 860
BsrDI GCAATG 2 cut(s) 317, 1345
BsrFI RCCGGY 1 cut(s) 1239
BsrGI TGTACA 1 cut(s) 2140
BsrI ACTGG 4 cut(s) 620, 857, 1026, 1722
BssAI RCCGGY 1 cut(s) 1239
BssECI CCNNGG 9 cut(s) 135, 201, 239, 374, 823, 1184, 2116, 2117, 2179
BssMI GATC 9 cut(s) 24, 38, 330, 492, 640, 694, 865, 1945, 2044
BssNI GRCGYC 3 cut(s) 87, 338, 792
BssT1I CCWWGG 1 cut(s) 823
Bst2UI CCWGG 4 cut(s) 699, 1785, 2118, 2181
Bst4CI ACNGT 5 cut(s) 592, 976, 1500, 1556, 2074
Bst6I CTCTTC 3 cut(s) 1200, 1677, 1686
BstACI GRCGYC 3 cut(s) 87, 338, 792
BstAUI TGTACA 1 cut(s) 2140
BstBAI YACGTR 1 cut(s) 575
BstC8I GCNNGC 3 cut(s) 187, 231, 325
BstDEI CTNAG 7 cut(s) 471, 909, 1290, 1773, 1841, 1926, 1965
BstDSI CCRYGG 1 cut(s) 201
BstEII GGTNACC 1 cut(s) 2015
BstENI CCTNNNNNAGG 1 cut(s) 2184
BstF5I GGATG 4 cut(s) 1177, 1283, 2203, 2236
BstFNI CGCG 5 cut(s) 92, 183, 198, 203, 1764
BstH2I RGCGCY 2 cut(s) 324, 1192
BstHHI GCGC 5 cut(s) 185, 200, 323, 1191, 1764
BstKTI GATC 9 cut(s) 27, 41, 333, 495, 643, 697, 868, 1948, 2047
BstMAI GTCTC 4 cut(s) 9, 476, 606, 1401
BstMBI GATC 9 cut(s) 24, 38, 330, 492, 640, 694, 865, 1945, 2044
BstMCI CGRYCG 3 cut(s) 37, 440, 1768
BstNI CCWGG 4 cut(s) 699, 1785, 2118, 2181
BstNSI RCATGY 4 cut(s) 431, 458, 1078, 1379
BstPI GGTNACC 1 cut(s) 2015
BstSCI CCNGG 6 cut(s) 135, 697, 1183, 1783, 2116, 2179
BstSFI CTRYAG 1 cut(s) 1050
BstUI CGCG 5 cut(s) 92, 183, 198, 203, 1764
BstV2I GAAGAC 5 cut(s) 6, 911, 1425, 1449, 1489
BstX2I RGATCY 1 cut(s) 640
BstYI RGATCY 1 cut(s) 640
BstZI CGGCCG 1 cut(s) 437
Bsu36I CCTNAGG 1 cut(s) 1773
BsuRI GGCC 7 cut(s) 95, 140, 407, 439, 1256, 1492, 1859
BtgI CCRYGG 1 cut(s) 201
BtsCI GGATG 4 cut(s) 1177, 1283, 2203, 2236
BtsIMutI CAGTG 4 cut(s) 779, 971, 1561, 1729
Cac8I GCNNGC 3 cut(s) 187, 231, 325
CaiI CAGNNNCTG 1 cut(s) 1046
CfoI GCGC 5 cut(s) 185, 200, 323, 1191, 1764
Cfr10I RCCGGY 1 cut(s) 1239
Cfr13I GGNCC 7 cut(s) 139, 349, 390, 1181, 1491, 1857, 2201
Cfr42I CCGCGG 1 cut(s) 204
CseI GACGC 3 cut(s) 391, 781, 1854
Csp6I GTAC 4 cut(s) 954, 1356, 1791, 2141
CspAI ACCGGT 1 cut(s) 1239
CviQI GTAC 4 cut(s) 954, 1356, 1791, 2141
DdeI CTNAG 7 cut(s) 471, 909, 1290, 1773, 1841, 1926, 1965
DpnI GATC 9 cut(s) 26, 40, 332, 494, 642, 696, 867, 1947, 2046
DpnII GATC 9 cut(s) 24, 38, 330, 492, 640, 694, 865, 1945, 2044
DraIII CACNNNGTG 1 cut(s) 731
DrdI GACNNNNNNGTC 1 cut(s) 388
DriI GACNNNNNGTC 1 cut(s) 295
DseDI GACNNNNNNGTC 1 cut(s) 388
EaeI YGGCCR 2 cut(s) 93, 437
EagI CGGCCG 1 cut(s) 437
Eam1104I CTCTTC 3 cut(s) 1200, 1677, 1686
Eam1105I GACNNNNNGTC 1 cut(s) 295
EarI CTCTTC 3 cut(s) 1200, 1677, 1686
EciI GGCGGA 1 cut(s) 683
EclXI CGGCCG 1 cut(s) 437
Eco130I CCWWGG 1 cut(s) 823
Eco32I GATATC 1 cut(s) 757
Eco47I GGWCC 4 cut(s) 349, 390, 1181, 2201
Eco52I CGGCCG 1 cut(s) 437
Eco57I CTGAAG 4 cut(s) 1142, 1662, 1701, 1814
Eco72I CACGTG 1 cut(s) 575
Eco81I CCTNAGG 1 cut(s) 1773
Eco88I CYCGRG 1 cut(s) 8
Eco91I GGTNACC 1 cut(s) 2015
EcoNI CCTNNNNNAGG 1 cut(s) 2184
EcoO109I RGGNCCY 1 cut(s) 1491
EcoO65I GGTNACC 1 cut(s) 2015
EcoRII CCWGG 4 cut(s) 697, 1783, 2116, 2179
EcoRV GATATC 1 cut(s) 757
EcoT14I CCWWGG 1 cut(s) 823
EcoT22I ATGCAT 1 cut(s) 1942
ErhI CCWWGG 1 cut(s) 823
FalI AAGNNNNNCTT 2 cut(s) 807, 839
FaqI GGGAC 1 cut(s) 145
FauI CCCGC 4 cut(s) 170, 188, 308, 360
FbaI TGATCA 2 cut(s) 492, 2044
FokI GGATG 3 cut(s) 1184, 1270, 2210
FspBI CTAG 6 cut(s) 207, 951, 1335, 1632, 1716, 1794
GlaI GCGC 5 cut(s) 184, 199, 322, 1190, 1763
GsuI CTGGAG 1 cut(s) 1009
HaeII RGCGCY 2 cut(s) 324, 1192
HaeIII GGCC 7 cut(s) 95, 140, 407, 439, 1256, 1492, 1859
HapII CCGG 6 cut(s) 47, 137, 388, 760, 1184, 1240
HgaI GACGC 3 cut(s) 391, 781, 1854
HhaI GCGC 5 cut(s) 185, 200, 323, 1191, 1764
Hin1I GRCGYC 3 cut(s) 87, 338, 792
Hin6I GCGC 5 cut(s) 183, 198, 321, 1189, 1762
HinP1I GCGC 5 cut(s) 183, 198, 321, 1189, 1762
HincII GTYRAC 1 cut(s) 129
HindII GTYRAC 1 cut(s) 129
HindIII AAGCTT 1 cut(s) 1329
HinfI GANTC 8 cut(s) 11, 293, 544, 833, 843, 1709, 1901, 1997
HpaII CCGG 6 cut(s) 47, 137, 388, 760, 1184, 1240
HphI GGTGA 7 cut(s) 842, 925, 1082, 1398, 1586, 1985, 2009
Hpy166II GTNNAC 5 cut(s) 129, 349, 381, 1099, 2141
Hpy188III TCNNGA 9 cut(s) 8, 334, 760, 893, 1001, 1199, 1261, 1679, 1994
Hpy8I GTNNAC 5 cut(s) 129, 349, 381, 1099, 2141
Hpy99I CGWCG 8 cut(s) 86, 89, 92, 293, 301, 304, 343, 367
HpyAV CCTTC 6 cut(s) 244, 256, 532, 956, 1087, 1637
HpyCH4III ACNGT 5 cut(s) 592, 976, 1500, 1556, 2074
HpyCH4IV ACGT 6 cut(s) 87, 338, 574, 1609, 1789, 2152
HpyCH4V TGCA 9 cut(s) 189, 214, 600, 632, 980, 1508, 1544, 1940, 1961
HpyF3I CTNAG 7 cut(s) 471, 909, 1290, 1773, 1841, 1926, 1965
HpySE526I ACGT 6 cut(s) 87, 338, 574, 1609, 1789, 2152
Hsp92I GRCGYC 3 cut(s) 87, 338, 792
HspAI GCGC 5 cut(s) 183, 198, 321, 1189, 1762
Kpn2I TCCGGA 1 cut(s) 759
Ksp22I TGATCA 2 cut(s) 492, 2044
KspI CCGCGG 1 cut(s) 204
Kzo9I GATC 9 cut(s) 24, 38, 330, 492, 640, 694, 865, 1945, 2044
LmnI GCTCC 3 cut(s) 265, 318, 390
LweI GCATC 4 cut(s) 1531, 1948, 1949, 2215
MaeI CTAG 6 cut(s) 207, 951, 1335, 1632, 1716, 1794
MaeII ACGT 6 cut(s) 87, 338, 574, 1609, 1789, 2152
MaeIII GTNAC 8 cut(s) 334, 515, 553, 1070, 1199, 1213, 1973, 2015
MalI GATC 9 cut(s) 26, 40, 332, 494, 642, 696, 867, 1947, 2046
MboI GATC 9 cut(s) 24, 38, 330, 492, 640, 694, 865, 1945, 2044
MfeI CAATTG 1 cut(s) 368
MflI RGATCY 1 cut(s) 640
MhlI GDGCHC 1 cut(s) 417
MlyI GAGTC 2 cut(s) 20, 302
MmeI TCCRAC 3 cut(s) 57, 988, 2113
Mph1103I ATGCAT 1 cut(s) 1942
MroI TCCGGA 1 cut(s) 759
MroXI GAANNNNTTC 1 cut(s) 1627
MseI TTAA 3 cut(s) 1601, 1752, 2007
MslI CAYNNNNRTG 3 cut(s) 964, 1374, 1956
MspA1I CMGCKG 3 cut(s) 157, 203, 442
MspI CCGG 6 cut(s) 47, 137, 388, 760, 1184, 1240
MspR9I CCNGG 6 cut(s) 137, 699, 1185, 1785, 2118, 2181
MunI CAATTG 1 cut(s) 368
MvaI CCWGG 4 cut(s) 699, 1785, 2118, 2181
MvnI CGCG 5 cut(s) 92, 183, 198, 203, 1764
NciI CCSGG 2 cut(s) 137, 1185
NdeII GATC 9 cut(s) 24, 38, 330, 492, 640, 694, 865, 1945, 2044
NlaIV GGNNCC 5 cut(s) 51, 141, 351, 937, 1493
NmeAIII GCCGAG 4 cut(s) 259, 264, 446, 484
NmuCI GTSAC 8 cut(s) 334, 515, 553, 1070, 1199, 1213, 1973, 2015
NsiI ATGCAT 1 cut(s) 1942
NspI RCATGY 4 cut(s) 431, 458, 1078, 1379
PaeR7I CTCGAG 1 cut(s) 8
PasI CCCWGGG 1 cut(s) 2117
PcsI WCGNNNNNNNCGW 1 cut(s) 1443
PdmI GAANNNNTTC 1 cut(s) 1627
PfeI GAWTC 6 cut(s) 544, 833, 843, 1709, 1901, 1997
PflFI GACNNNGTC 2 cut(s) 86, 124
PflMI CCANNNNNTGG 2 cut(s) 875, 2026
PinAI ACCGGT 1 cut(s) 1239
PleI GAGTC 2 cut(s) 19, 301
PmaCI CACGTG 1 cut(s) 575
PmlI CACGTG 1 cut(s) 575
PpsI GAGTC 2 cut(s) 19, 301
Ppu21I YACGTR 1 cut(s) 575
Psp6I CCWGG 4 cut(s) 697, 1783, 2116, 2179
PspCI CACGTG 1 cut(s) 575
PspEI GGTNACC 1 cut(s) 2015
PspGI CCWGG 4 cut(s) 697, 1783, 2116, 2179
PspN4I GGNNCC 5 cut(s) 51, 141, 351, 937, 1493
PspPI GGNCC 7 cut(s) 139, 349, 390, 1181, 1491, 1857, 2201
PstNI CAGNNNCTG 1 cut(s) 1046
PsuI RGATCY 1 cut(s) 640
PsyI GACNNNGTC 2 cut(s) 86, 124
RsaI GTAC 4 cut(s) 955, 1357, 1792, 2142
RsaNI GTAC 4 cut(s) 954, 1356, 1791, 2141
RseI CAYNNNNRTG 3 cut(s) 964, 1374, 1956
SacII CCGCGG 1 cut(s) 204
SaqAI TTAA 3 cut(s) 1601, 1752, 2007
Sau3AI GATC 9 cut(s) 24, 38, 330, 492, 640, 694, 865, 1945, 2044
Sau96I GGNCC 7 cut(s) 139, 349, 390, 1181, 1491, 1857, 2201
SchI GAGTC 2 cut(s) 20, 302
ScrFI CCNGG 6 cut(s) 137, 699, 1185, 1785, 2118, 2181
SduI GDGCHC 1 cut(s) 417
SfaNI GCATC 4 cut(s) 1531, 1948, 1949, 2215
SfcI CTRYAG 1 cut(s) 1050
Sfr274I CTCGAG 1 cut(s) 8
Sfr303I CCGCGG 1 cut(s) 204
SgrBI CCGCGG 1 cut(s) 204
SinI GGWCC 4 cut(s) 349, 390, 1181, 2201
SlaI CTCGAG 1 cut(s) 8
SmiMI CAYNNNNRTG 3 cut(s) 964, 1374, 1956
SmlI CTYRAG 2 cut(s) 8, 511
SmoI CTYRAG 2 cut(s) 8, 511
SspMI CTAG 6 cut(s) 207, 951, 1335, 1632, 1716, 1794
StyD4I CCNGG 6 cut(s) 135, 697, 1183, 1783, 2116, 2179
StyI CCWWGG 1 cut(s) 823
TaaI ACNGT 5 cut(s) 592, 976, 1500, 1556, 2074
TaiI ACGT 6 cut(s) 90, 341, 577, 1612, 1792, 2155
TaqI TCGA 5 cut(s) 9, 1437, 1744, 1948, 2193
TaqII GACCGA 1 cut(s) 51
TatI WGTACW 2 cut(s) 953, 2140
TfiI GAWTC 6 cut(s) 544, 833, 843, 1709, 1901, 1997
Tru1I TTAA 3 cut(s) 1601, 1752, 2007
Tru9I TTAA 3 cut(s) 1601, 1752, 2007
TscAI CASTG 4 cut(s) 786, 971, 1561, 1729
TseFI GTSAC 8 cut(s) 334, 515, 553, 1070, 1199, 1213, 1973, 2015
Tsp45I GTSAC 8 cut(s) 334, 515, 553, 1070, 1199, 1213, 1973, 2015
TspGWI ACGGA 2 cut(s) 400, 695
TspRI CASTG 4 cut(s) 786, 971, 1561, 1729
Tth111I GACNNNGTC 2 cut(s) 86, 124
Van91I CCANNNNNTGG 2 cut(s) 875, 2026
VpaK11BI GGWCC 4 cut(s) 349, 390, 1181, 2201
XagI CCTNNNNNAGG 1 cut(s) 2184
XapI RAATTY 3 cut(s) 995, 1363, 1514
XceI RCATGY 4 cut(s) 431, 458, 1078, 1379
XcmI CCANNNNNNNNNTGG 1 cut(s) 400
XhoI CTCGAG 1 cut(s) 8
XmnI GAANNNNTTC 1 cut(s) 1627
XspI CTAG 6 cut(s) 207, 951, 1335, 1632, 1716, 1794
ZraI GACGTC 2 cut(s) 88, 339
Zsp2I ATGCAT 1 cut(s) 1942
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.