MD06G1185100.v1.1

WSTF, HB1, Itc1p, MBD9 motif 1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr06
OG0007850
Physical Location & Seq
Reverse (-)
32305071 .. 32311321
6251 bp
Loading structure...
UTR
Exon/CDS
Intron
MD06G1185100.v1.1.491

Sequence Viewer

Length: 2184 bp
ATGTCTCTGGAATCTTCACTTCCTCCGATCCCAGCCGTCCGATCCTCGCCGGAGCCCCAGCAGCAAGAACAACCCCCTCAGAACGACAACAAGGCATCTGCCCCGGCCCCCACGCCACCCTTATCCAGGAGCAACCGCCCCTCCCGCGCCTGCACCATACGCGCCGCCGCTCGGATACAGCAGCAGTTCCAGCAGCAGCAGAACCACCCCGCCGAGAAACGGCGAGCCGTCAGCAAAAAGGAACAGCAGCAGCAGCAGAGAGATGACGAGCGGTCGTCGCCGCAATGCAGCAGCGCCAGCAAGATTGTGACACCGCTGGTGGAACCTCCCCCGCCCTCGCTATTGCCTCGCTGGACTCTCCGCTCCATGTGGGAATTGGCTTCCGTACTCAATTTCTTGCACGTTTATCGGCCGCTGCTGAATATTTCGGATGAGTTCTCGGCGGAGGAGTTGGAGACGGCTTTGATCACACCCAACGATACTTTGAGTGACATTCACATTCCATTGTTGAAGGCAATTCCTCCTATTACGCGAATGGCACTTACACGTGATACTTGGGTCACTGTTTTATGCAGAAAGCTGAGAGACTGGTGGCATTGGGTTGCAGAGGGGGATCTACCCATTGTTGTTTCACATGGGGCGGAGATTGAGGCATATAAAACACTTGATCCTGGGGTCCGTGTGGTCATCTTGAAAGCACTTTGTGATATTCGTGTTGAGCAAGAAGATATTCGGAACTATATTGACAACTCACTGAAGCATGGAGTTCAACTTTCAGCATTTCGCAAAGAACGTATTGGAGGTGATTCACAAGGAATCTCTTACTGGTATGAAGATGATCCAATAATTGGTTATCGGTTATATCGGGAGATAAGGAAGGTTGATATGAAGAAAGTGAAGGGAAAAGGTTCCAATGTCCTTCCCAGTGCATCATATCAGTGGGAAACAGTCGCAACCAATTTCGATGAATTCCAAGATGTTTCTGAGAAACTTTTCTCGAGTAAGAATAGAACGGAGGCTTCTCTAGGAAAGAAGTTGAAAGGAGACATGCTTGCAGAGATTGAGAAGGTTCACAAGAGGAAAGAGAGGTTGCTAAAGAAGCAACACAGACAAGCTCTCCTCCTTGATAATTTTTTGACCGTGGATGGGCTTGGTCCAGGGCGCTCTCTTCGTGACAGAAAACCTGTAACCTACACGTTTGATGATTATGACCGGTCCATCAATGAGGCAATCAAAGTAACCAAAAAGAAGCAGCCATCTCCAGATCCTTTACAGAAAAGAGAGGTTGTTGGGAGGCCTGAAGCTTCTAGTAATGGTAAATGGAGTGCTGCTACAAATTCCTATGAACATGTGGGATTTAGTGCTGCATCGCCTAAATCACCTGATTATGATGATGACGATGATGACGAAGAAGATAACAAATCTGAACAATTGGATCGAAGTAATCGGCGAAGACAGAGGCCCCAACGGTATTCTGCGAAAGAATTTGTTGAAGCAGTTTCAGATAATGACGCAGACTTTGACAGTGATGATGATATAGTTGGCGAGGCTATATATGATGAGGAATACTTAAAGAAACGTAAAGAGAGAAGAAAGTTTTCTAGTAGTTCCGAAGGAGATGAGGAGTATCATTTTGAGGAAGAAAATGCTGAAGAAGAGGAAGAAGAGGAAATGGAAGATTCCGCTAGTGCCAGCGAGGATAGTGAAGAACCCCGAAAATTGAAGAAGTTGCCAGGCCGTACTAGGAGGGAAGCTAAATTGAGATCGGTTGATGAACTCCAGTCAGGTCTGAGACGCAGTAAGAGGGCCACCAGAAATCGTATTGATTATCGACAATATGAGTTCTCAGAGTCAGAACCAGAACCTATGAAACCTGAGAAATCAAATGCATCGGATGAACATTATGATGCCAGTGAGAACGGGGATTATTCAATGGAAAGTCAAGAATCAGATGGTAATATTGAGGACCAAGAAATGAAAGTTGATCAGGCTGTTGAAAATTATCCCGAGACAACAGTTGAGAAAGAGCAAAACCAGCCACCTGAAAAACCAAATAGCCCAGGGAAAGAGGAAGTCGAAGGTGTACAAAAAAGACGTTTCCTCGACCTCAACGAGCTAGCCCCTGGTTCAGGTTTTGATGACGGTCCAAACACATTAATGAAAGATGATGCGGATGATTTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DDT WHIM1

Protein Analysis

728

Amino Acids

83.21

Weight (kDa)

5.06

Isoelectric Point (pI)

64.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DDT PF02791 128 - 173 1.1e-06 DDT domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 848
AccBSI CCGCTC 3 cut(s) 170, 271, 363
AccII CGCG 3 cut(s) 147, 162, 532
AclWI GGATC 7 cut(s) 22, 36, 621, 662, 833, 1259, 1443
AcoI YGGCCR 1 cut(s) 410
AcsI RAATTY 3 cut(s) 968, 1336, 1484
AcuI CTGAAG 3 cut(s) 776, 1320, 1671
AcvI CACGTG 1 cut(s) 548
AdeI CACNNNGTG 1 cut(s) 704
AfaI GTAC 3 cut(s) 387, 1741, 2085
AfiI CCNNNNNNNGG 6 cut(s) 126, 171, 219, 848, 1146, 2129
AflIII ACRYGT 3 cut(s) 545, 1194, 1348
AgeI ACCGGT 1 cut(s) 1212
AgsI TTSAA 8 cut(s) 511, 694, 770, 1039, 1493, 1723, 1932, 1997
AhdI GACNNNNNGTC 1 cut(s) 271
AjnI CCWGG 6 cut(s) 125, 670, 1156, 1732, 2059, 2122
AluBI AGCT 5 cut(s) 580, 1115, 1304, 1754, 2116
AluI AGCT 5 cut(s) 580, 1115, 1304, 1754, 2116
Alw26I GTCTC 6 cut(s) 9, 449, 579, 1038, 1786, 2003
AlwI GGATC 7 cut(s) 22, 36, 621, 662, 833, 1259, 1443
Ama87I CYCGRG 2 cut(s) 997, 2006
AoxI GGCC 6 cut(s) 105, 410, 1295, 1460, 1735, 1806
ApoI RAATTY 3 cut(s) 968, 1336, 1484
ArsI GACNNNNNNTTYG 2 cut(s) 1502, 1534
AseI ATTAAT 1 cut(s) 2156
AsiGI ACCGGT 1 cut(s) 1212
Asp700I GAANNNNTTC 4 cut(s) 729, 907, 992, 1597
AspLEI GCGC 4 cut(s) 149, 164, 296, 1164
AspS9I GGNCC 8 cut(s) 106, 676, 1154, 1215, 1461, 1806, 1966, 2144
AsuC2I CCSGG 1 cut(s) 104
AsuHPI GGTGA 2 cut(s) 815, 1371
AsuNHI GCTAGC 1 cut(s) 2116
AvaI CYCGRG 2 cut(s) 997, 2006
AvaII GGWCC 5 cut(s) 676, 1154, 1215, 1966, 2144
BaeI ACNNNNGTAYC 2 cut(s) 543, 576
BanII GRGCYC 1 cut(s) 57
BbrPI CACGTG 1 cut(s) 548
BbsI GAAGAC 1 cut(s) 1459
BccI CCATC 4 cut(s) 1139, 1226, 1264, 1946
BceAI ACGGC 5 cut(s) 20, 212, 236, 474, 1722
BcgI CGANNNNNNTGC 2 cut(s) 389, 423
BciT130I CCWGG 6 cut(s) 127, 672, 1158, 1734, 2061, 2124
BciVI GTATCC 1 cut(s) 168
BclI TGATCA 2 cut(s) 465, 1984
BcnI CCSGG 1 cut(s) 104
BcoDI GTCTC 6 cut(s) 9, 449, 579, 1038, 1786, 2003
BfaI CTAG 6 cut(s) 1025, 1308, 1602, 1686, 1743, 2117
BfoI RGCGCY 2 cut(s) 297, 1165
BfuI GTATCC 1 cut(s) 168
Bme1390I CCNGG 7 cut(s) 104, 127, 672, 1158, 1734, 2061, 2124
Bme18I GGWCC 5 cut(s) 676, 1154, 1215, 1966, 2144
BmeRI GACNNNNNGTC 1 cut(s) 271
BmeT110I CYCGRG 2 cut(s) 997, 2006
BmgT120I GGNCC 8 cut(s) 106, 676, 1154, 1215, 1461, 1806, 1966, 2144
BmiI GGNNCC 6 cut(s) 54, 108, 324, 677, 910, 1463
BmrFI CCNGG 7 cut(s) 104, 127, 672, 1158, 1734, 2061, 2124
BmrI ACTGGG 1 cut(s) 918
BmsI GCATC 6 cut(s) 104, 938, 1376, 1897, 1898, 2158
BmtI GCTAGC 1 cut(s) 2120
BmuI ACTGGG 1 cut(s) 918
BpiI GAAGAC 1 cut(s) 1459
BpmI CTGGAG 2 cut(s) 1245, 1763
BpuMI CCSGG 1 cut(s) 104
BsaAI YACGTR 1 cut(s) 548
BsaJI CCNNGG 7 cut(s) 102, 671, 1140, 1157, 2059, 2060, 2122
BsaWI WCCGGW 1 cut(s) 1212
BsaXI ACNNNNNCTCC 4 cut(s) 125, 155, 1101, 1131
Bsc4I CCNNNNNNNGG 6 cut(s) 126, 171, 219, 848, 1146, 2129
Bse118I RCCGGY 1 cut(s) 1212
Bse1I ACTGG 5 cut(s) 593, 830, 924, 1780, 1911
Bse3DI GCAATG 1 cut(s) 290
BseBI CCWGG 6 cut(s) 127, 672, 1158, 1734, 2061, 2124
BseDI CCNNGG 7 cut(s) 102, 671, 1140, 1157, 2059, 2060, 2122
BseGI GGATG 4 cut(s) 436, 1150, 1900, 2179
BseLI CCNNNNNNNGG 6 cut(s) 126, 171, 219, 848, 1146, 2129
BseMI GCAATG 1 cut(s) 290
BseMII CTCAG 6 cut(s) 92, 572, 975, 1781, 1860, 1866
BseNI ACTGG 5 cut(s) 593, 830, 924, 1780, 1911
BseRI GAGGAG 3 cut(s) 461, 1109, 1637
BseX3I CGGCCG 1 cut(s) 410
BseYI CCCAGC 2 cut(s) 31, 57
BsgI GTGCAG 1 cut(s) 136
Bsh1236I CGCG 3 cut(s) 147, 162, 532
Bsh1285I CGRYCG 2 cut(s) 275, 413
BshFI GGCC 6 cut(s) 107, 412, 1297, 1462, 1737, 1808
BshTI ACCGGT 1 cut(s) 1212
BsiEI CGRYCG 2 cut(s) 275, 413
BsiHKCI CYCGRG 2 cut(s) 997, 2006
BsiSI CCGG 3 cut(s) 50, 104, 1213
BslI CCNNNNNNNGG 6 cut(s) 126, 171, 219, 848, 1146, 2129
BsmAI GTCTC 6 cut(s) 9, 449, 579, 1038, 1786, 2003
BsmBI CGTCTC 2 cut(s) 449, 1786
BsnI GGCC 6 cut(s) 107, 412, 1297, 1462, 1737, 1808
BsoBI CYCGRG 2 cut(s) 997, 2006
Bsp1286I GDGCHC 1 cut(s) 57
Bsp1407I TGTACA 1 cut(s) 2083
BspANI GGCC 6 cut(s) 107, 412, 1297, 1462, 1737, 1808
BspCNI CTCAG 6 cut(s) 91, 573, 976, 1782, 1859, 1867
BspFNI CGCG 3 cut(s) 147, 162, 532
BspLI GGNNCC 6 cut(s) 54, 108, 324, 677, 910, 1463
BspOI GCTAGC 1 cut(s) 2120
BspPI GGATC 7 cut(s) 22, 36, 621, 662, 833, 1259, 1443
BsrBI CCGCTC 3 cut(s) 170, 271, 363
BsrDI GCAATG 1 cut(s) 290
BsrFI RCCGGY 1 cut(s) 1212
BsrGI TGTACA 1 cut(s) 2083
BsrI ACTGG 5 cut(s) 593, 830, 924, 1780, 1911
BssAI RCCGGY 1 cut(s) 1212
BssECI CCNNGG 7 cut(s) 102, 671, 1140, 1157, 2059, 2060, 2122
Bst2UI CCWGG 6 cut(s) 127, 672, 1158, 1734, 2061, 2124
Bst4CI ACNGT 7 cut(s) 565, 949, 1141, 1470, 1526, 2017, 2144
Bst6I CTCTTC 3 cut(s) 1173, 1650, 1659
BstAUI TGTACA 1 cut(s) 2083
BstBAI YACGTR 1 cut(s) 548
BstC8I GCNNGC 6 cut(s) 151, 225, 298, 1053, 1693, 2118
BstDEI CTNAG 6 cut(s) 78, 581, 984, 1790, 1846, 1875
BstDSI CCRYGG 1 cut(s) 1140
BstENI CCTNNNNNAGG 2 cut(s) 124, 2127
BstF5I GGATG 4 cut(s) 436, 1150, 1900, 2179
BstFNI CGCG 3 cut(s) 147, 162, 532
BstH2I RGCGCY 2 cut(s) 297, 1165
BstHHI GCGC 4 cut(s) 149, 164, 296, 1164
BstMAI GTCTC 6 cut(s) 9, 449, 579, 1038, 1786, 2003
BstMCI CGRYCG 2 cut(s) 275, 413
BstMWI GCNNNNNNNGC 9 cut(s) 61, 144, 159, 190, 253, 277, 297, 1099, 2035
BstNI CCWGG 6 cut(s) 127, 672, 1158, 1734, 2061, 2124
BstNSI RCATGY 2 cut(s) 1051, 1352
BstSCI CCNGG 7 cut(s) 102, 125, 670, 1156, 1732, 2059, 2122
BstUI CGCG 3 cut(s) 147, 162, 532
BstV2I GAAGAC 1 cut(s) 1459
BstX2I RGATCY 2 cut(s) 613, 1264
BstYI RGATCY 2 cut(s) 613, 1264
BstZI CGGCCG 1 cut(s) 410
BsuI GTATCC 1 cut(s) 168
BsuRI GGCC 6 cut(s) 107, 412, 1297, 1462, 1737, 1808
BtgI CCRYGG 1 cut(s) 1140
BtgZI GCGATG 1 cut(s) 1353
BtsCI GGATG 4 cut(s) 436, 1150, 1900, 2179
BtsIMutI CAGTG 6 cut(s) 561, 752, 931, 944, 1531, 1918
Cac8I GCNNGC 6 cut(s) 151, 225, 298, 1053, 1693, 2118
CfoI GCGC 4 cut(s) 149, 164, 296, 1164
Cfr10I RCCGGY 1 cut(s) 1212
Cfr13I GGNCC 8 cut(s) 106, 676, 1154, 1215, 1461, 1806, 1966, 2144
CseI GACGC 2 cut(s) 1520, 1803
Csp6I GTAC 3 cut(s) 386, 1740, 2084
CspAI ACCGGT 1 cut(s) 1212
CviAII CATG 5 cut(s) 367, 635, 761, 1048, 1349
CviQI GTAC 3 cut(s) 386, 1740, 2084
DdeI CTNAG 6 cut(s) 78, 581, 984, 1790, 1846, 1875
DraIII CACNNNGTG 1 cut(s) 704
DriI GACNNNNNGTC 1 cut(s) 271
EaeI YGGCCR 1 cut(s) 410
EagI CGGCCG 1 cut(s) 410
Eam1104I CTCTTC 3 cut(s) 1173, 1650, 1659
Eam1105I GACNNNNNGTC 1 cut(s) 271
EarI CTCTTC 3 cut(s) 1173, 1650, 1659
EciI GGCGGA 2 cut(s) 458, 656
EclXI CGGCCG 1 cut(s) 410
Eco147I AGGCCT 1 cut(s) 1297
Eco24I GRGCYC 1 cut(s) 57
Eco47I GGWCC 5 cut(s) 676, 1154, 1215, 1966, 2144
Eco52I CGGCCG 1 cut(s) 410
Eco57I CTGAAG 3 cut(s) 776, 1320, 1671
Eco72I CACGTG 1 cut(s) 548
Eco88I CYCGRG 2 cut(s) 997, 2006
EcoNI CCTNNNNNAGG 2 cut(s) 124, 2127
EcoO109I RGGNCCY 1 cut(s) 1461
EcoRI GAATTC 1 cut(s) 968
EcoRII CCWGG 6 cut(s) 125, 670, 1156, 1732, 2059, 2122
EcoT22I ATGCAT 1 cut(s) 1891
EcoT38I GRGCYC 1 cut(s) 57
Esp3I CGTCTC 2 cut(s) 449, 1786
FaeI CATG 5 cut(s) 370, 638, 764, 1051, 1352
FatI CATG 5 cut(s) 366, 634, 760, 1047, 1348
FauI CCCGC 3 cut(s) 152, 217, 339
FbaI TGATCA 2 cut(s) 465, 1984
FokI GGATG 3 cut(s) 443, 1157, 1907
FriOI GRGCYC 1 cut(s) 57
FspBI CTAG 6 cut(s) 1025, 1308, 1602, 1686, 1743, 2117
GlaI GCGC 4 cut(s) 148, 163, 295, 1163
GsaI CCCAGC 2 cut(s) 35, 61
GsuI CTGGAG 2 cut(s) 1245, 1763
HaeII RGCGCY 2 cut(s) 297, 1165
HaeIII GGCC 6 cut(s) 107, 412, 1297, 1462, 1737, 1808
HapII CCGG 3 cut(s) 50, 104, 1213
HgaI GACGC 2 cut(s) 1520, 1803
HhaI GCGC 4 cut(s) 149, 164, 296, 1164
Hin1II CATG 5 cut(s) 370, 638, 764, 1051, 1352
Hin6I GCGC 4 cut(s) 147, 162, 294, 1162
HinP1I GCGC 4 cut(s) 147, 162, 294, 1162
HindIII AAGCTT 1 cut(s) 1302
HinfI GANTC 7 cut(s) 11, 355, 806, 816, 1679, 1850, 1946
HpaII CCGG 3 cut(s) 50, 104, 1213
HphI GGTGA 2 cut(s) 815, 1371
Hpy166II GTNNAC 2 cut(s) 1072, 2084
Hpy188III TCNNGA 8 cut(s) 8, 691, 866, 997, 1172, 1262, 1943, 2006
Hpy8I GTNNAC 2 cut(s) 1072, 2084
Hpy99I CGWCG 1 cut(s) 280
HpyAV CCTTC 7 cut(s) 505, 871, 892, 929, 1060, 1607, 2072
HpyCH4III ACNGT 7 cut(s) 565, 949, 1141, 1470, 1526, 2017, 2144
HpyCH4IV ACGT 6 cut(s) 402, 547, 793, 1196, 1579, 2095
HpyCH4V TGCA 9 cut(s) 153, 288, 400, 573, 605, 929, 1055, 1367, 1889
HpyF10VI GCNNNNNNNGC 9 cut(s) 61, 144, 159, 190, 253, 277, 297, 1099, 2035
HpyF3I CTNAG 6 cut(s) 78, 581, 984, 1790, 1846, 1875
HpySE526I ACGT 6 cut(s) 402, 547, 793, 1196, 1579, 2095
Hsp92II CATG 5 cut(s) 370, 638, 764, 1051, 1352
HspAI GCGC 4 cut(s) 147, 162, 294, 1162
Ksp22I TGATCA 2 cut(s) 465, 1984
LmnI GCTCC 3 cut(s) 52, 129, 368
LweI GCATC 6 cut(s) 104, 938, 1376, 1897, 1898, 2158
MaeI CTAG 6 cut(s) 1025, 1308, 1602, 1686, 1743, 2117
MaeII ACGT 6 cut(s) 402, 547, 793, 1196, 1579, 2095
MaeIII GTNAC 6 cut(s) 307, 488, 559, 1172, 1186, 1237
MbiI CCGCTC 3 cut(s) 170, 271, 363
MfeI CAATTG 1 cut(s) 1430
MflI RGATCY 2 cut(s) 613, 1264
MhlI GDGCHC 1 cut(s) 57
MlyI GAGTC 2 cut(s) 349, 1859
MmeI TCCRAC 1 cut(s) 432
Mph1103I ATGCAT 1 cut(s) 1891
MroXI GAANNNNTTC 4 cut(s) 729, 907, 992, 1597
MseI TTAA 2 cut(s) 1571, 2156
MslI CAYNNNNRTG 3 cut(s) 937, 1905, 2156
MspA1I CMGCKG 2 cut(s) 316, 415
MspI CCGG 3 cut(s) 50, 104, 1213
MspR9I CCNGG 7 cut(s) 104, 127, 672, 1158, 1734, 2061, 2124
MunI CAATTG 1 cut(s) 1430
MvaI CCWGG 6 cut(s) 127, 672, 1158, 1734, 2061, 2124
MvnI CGCG 3 cut(s) 147, 162, 532
MwoI GCNNNNNNNGC 9 cut(s) 61, 144, 159, 190, 253, 277, 297, 1099, 2035
NciI CCSGG 1 cut(s) 104
NheI GCTAGC 1 cut(s) 2116
NlaIII CATG 5 cut(s) 370, 638, 764, 1051, 1352
NlaIV GGNNCC 6 cut(s) 54, 108, 324, 677, 910, 1463
NmeAIII GCCGAG 2 cut(s) 238, 419
NmuCI GTSAC 4 cut(s) 307, 488, 559, 1172
NsiI ATGCAT 1 cut(s) 1891
NspI RCATGY 2 cut(s) 1051, 1352
PaeR7I CTCGAG 1 cut(s) 997
PasI CCCWGGG 1 cut(s) 2060
PceI AGGCCT 1 cut(s) 1297
PciI ACATGT 1 cut(s) 1348
PcsI WCGNNNNNNNCGW 3 cut(s) 790, 1404, 2109
PdmI GAANNNNTTC 4 cut(s) 729, 907, 992, 1597
PfeI GAWTC 5 cut(s) 11, 806, 816, 1679, 1946
PflMI CCANNNNNTGG 1 cut(s) 848
PfoI TCCNGGA 1 cut(s) 125
PinAI ACCGGT 1 cut(s) 1212
PleI GAGTC 2 cut(s) 349, 1858
PmaCI CACGTG 1 cut(s) 548
PmlI CACGTG 1 cut(s) 548
PpsI GAGTC 2 cut(s) 349, 1858
Ppu21I YACGTR 1 cut(s) 548
PscI ACATGT 1 cut(s) 1348
PshBI ATTAAT 1 cut(s) 2156
Psp6I CCWGG 6 cut(s) 125, 670, 1156, 1732, 2059, 2122
PspCI CACGTG 1 cut(s) 548
PspFI CCCAGC 2 cut(s) 31, 57
PspGI CCWGG 6 cut(s) 125, 670, 1156, 1732, 2059, 2122
PspN4I GGNNCC 6 cut(s) 54, 108, 324, 677, 910, 1463
PspPI GGNCC 8 cut(s) 106, 676, 1154, 1215, 1461, 1806, 1966, 2144
PsuI RGATCY 2 cut(s) 613, 1264
RsaI GTAC 3 cut(s) 387, 1741, 2085
RsaNI GTAC 3 cut(s) 386, 1740, 2084
RseI CAYNNNNRTG 3 cut(s) 937, 1905, 2156
SaqAI TTAA 2 cut(s) 1571, 2156
Sau96I GGNCC 8 cut(s) 106, 676, 1154, 1215, 1461, 1806, 1966, 2144
SchI GAGTC 2 cut(s) 349, 1859
ScrFI CCNGG 7 cut(s) 104, 127, 672, 1158, 1734, 2061, 2124
SduI GDGCHC 1 cut(s) 57
SfaNI GCATC 6 cut(s) 104, 938, 1376, 1897, 1898, 2158
Sfr274I CTCGAG 1 cut(s) 997
SinI GGWCC 5 cut(s) 676, 1154, 1215, 1966, 2144
SlaI CTCGAG 1 cut(s) 997
SmiMI CAYNNNNRTG 3 cut(s) 937, 1905, 2156
SmlI CTYRAG 1 cut(s) 997
SmoI CTYRAG 1 cut(s) 997
SseBI AGGCCT 1 cut(s) 1297
SspI AATATT 2 cut(s) 424, 1960
SspMI CTAG 6 cut(s) 1025, 1308, 1602, 1686, 1743, 2117
StuI AGGCCT 1 cut(s) 1297
StyD4I CCNGG 7 cut(s) 102, 125, 670, 1156, 1732, 2059, 2122
TaaI ACNGT 7 cut(s) 565, 949, 1141, 1470, 1526, 2017, 2144
TaiI ACGT 6 cut(s) 405, 550, 796, 1199, 1582, 2098
TaqI TCGA 6 cut(s) 963, 998, 1438, 1831, 2076, 2103
TatI WGTACW 1 cut(s) 2083
TauI GCSGC 4 cut(s) 167, 170, 283, 415
TfiI GAWTC 5 cut(s) 11, 806, 816, 1679, 1946
Tru1I TTAA 2 cut(s) 1571, 2156
Tru9I TTAA 2 cut(s) 1571, 2156
TscAI CASTG 6 cut(s) 568, 759, 931, 944, 1531, 1918
TseFI GTSAC 4 cut(s) 307, 488, 559, 1172
Tsp45I GTSAC 4 cut(s) 307, 488, 559, 1172
TspDTI ATGAA 9 cut(s) 846, 902, 981, 1359, 1788, 1883, 1911, 1991, 2174
TspGWI ACGGA 3 cut(s) 373, 668, 1028
TspRI CASTG 6 cut(s) 568, 759, 931, 944, 1531, 1918
Van91I CCANNNNNTGG 1 cut(s) 848
VpaK11BI GGWCC 5 cut(s) 676, 1154, 1215, 1966, 2144
VspI ATTAAT 1 cut(s) 2156
XagI CCTNNNNNAGG 2 cut(s) 124, 2127
XapI RAATTY 3 cut(s) 968, 1336, 1484
XceI RCATGY 2 cut(s) 1051, 1352
XcmI CCANNNNNNNNNTGG 1 cut(s) 373
XhoI CTCGAG 1 cut(s) 997
XmnI GAANNNNTTC 4 cut(s) 729, 907, 992, 1597
XspI CTAG 6 cut(s) 1025, 1308, 1602, 1686, 1743, 2117
Zsp2I ATGCAT 1 cut(s) 1891
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.