Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002953.1

Orthogroup ID

OG0007850

Physical Location & Seq

Genomic Coordinates Forward (+)

19913 .. 25173

Gene Structure 5261 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002953.1_g000006.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2091 bp

ctgtcccgcagcaaccgcccctcccgcgcttgcaccctacgcgccgcggctaggttgcagcagcagcagcagtaccagcacgccgagccgaggaagccgaaggcggcgaggaaggagcagccgccgcagcaggagaacgacgagtcgtcgtcgccgcagcaatgcgggagcgccagcaagatcgtgacgtcgctggtggacccgccctcgcagtcgcaattgccgcggtggacgctccggtccatgtgggaattggcctccgtgctcaattttctacatgcttttcggccgctgttgaatatacacgccgagttctcggctgaggaattggagactgctttgatcacacccaatgatagcttgagtgacgttcacattcccttgttgaaggcgattccccctgtgacaagaatggcacttacacgtgatacttggataactgttttatgcagaaagttgagagactggtggcattgggttgcagatggagatctacctattgttgcttcacatggggcggagattgaagtatataaaacacttgatcccggtgtccgtgtggtcattttgaaagcactttgtgatattcgtgttgagcaagaggatatccggaactatattgacaattcactgaaacatggtgtccagctttccacatttcgtaaagaacgccttgggggtgattcacatggaatctcttactggtatgaagatgatccaattattggttatcggttatatcgggagataaggaagactgaggtgaagaaagtaagagcaaagggttcccatgtccttcctagtacaacataccagtgggaaacagttgcaaccaattttgatgaatttcaagatgttggagaaaaacttttctccagtatcaatagaacagaggctgctgtaggaaaaaagttgaaaggtgacatgcttgtagagattgagaaggttcacaagaggaaagagaagttgctgaagaagcaacacagacaagctctgctccttgataattatgtgtctgtggatgggcttggtccggggcgctctcttcgtgacagaaaacctgtcacatacacttttgatgattatgaccggtcaatcaatgaggccatcaagataaccaaaacgaaacagccatcccctgagcctttacagaaacgagatgttgttatgaaacatgaagcttctagcaatggtaaatggagtggtacttcaaattcccatgagcatgtgggatttagcccactgtctcctaaatcacctgattacgaagacgaagaagatgatgttgaggaagatgacaaatctgaacaaatggatagaagcaatcggcgaagacagaggccccaacggtattctgcaaaagaatttgttgaagcagtttcagataatgatgcagactttgacagtgatgatgaaatagttggtgaagctatttatgatgaagaatacttaaagaaacgtaaggagaggagaaagttttctagtagctctgaaggagatgaggagtatcgttgggaggaagaaaatcctgaagaggaggaagaggaggaggaagaagattctgctagtgccagtgaagaaagtgatgaacctcgaaagtttaagaaactgcgcggtcgtcctaaggaattgccaggacgtactaggagggaagctaaattgaggtcggttgatgagctccagtcaggtctaagacgcagtaagagggccaccagaaatcgtattgattatcggcagtatgagttttcagattcagatacagagcctatgaaacctgagaagtcaaatgcatcagatcgacactctgatgcaactgagaatggtgactattcaatggaaagtcaagattcagatgttaatgatggtcaccatgaaatggaagttggtcaggctgatcaggctgttgaaaattacccagaaacagtagaaaaagaggaaaaccagccacctgaaaaatcaaatagcccaggggaaaatgaagttggaggtgtacagaaaagacgtttccttgacctaaacgaacttgcccctggttcaggttttgacgatggtccaaatacgataatgaaagatgatgcggatgatttgtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DDT WHIM1

Protein Analysis

696

Amino Acids

79.92

Weight (kDa)

5.18

Isoelectric Point (pI)

59.69

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007850)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18950 AT1G18950 AT1G18950
fragaria_vesca	FvH4_5g15860 FvH4_5g15860 FvH4_5g15860
malus_domestica	MD06G1185100.v1.1 MD14G1191000.v1.1
prunus_persica	Prupe.5G183900_v2.0.a1 Prupe.5G183900_v2.0.a1
pyrus_communis	pycom06g16430 pycom14g15870
rosa_chinensis	RchiOBHm_Chr7g0180231
rosa_laevigata	RLG00000005283
rosa_multiflora	Rmu_co8416195.1_g000001 Rmu_sc0002953.1_g000006 Rmu_sc0011963.1_g000009
rosa_roxburghii	Rroxscaffold_3G00273040
rosa_rugosa	Rorug06G0431700
rosa_samantha	Rh7AG031900 Rh7BG032000 Rh7CG033800 Rh7DG032300
rosa_wichuraiana	Rw7G002660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	238
AatII	GACGTC	1 cut(s)	191
AccB7I	CCANNNNNTGG	2 cut(s)	725, 1876
AccII	CGCG	5 cut(s)	27, 42, 47, 226, 1614
AccIII	TCCGGA	1 cut(s)	609
AclWI	GGATC	2 cut(s)	539, 710
AcoI	YGGCCR	1 cut(s)	287
AcsI	RAATTY	3 cut(s)	845, 1213, 1364
AcuI	CTGAAG	3 cut(s)	992, 1512, 1551
AcvI	CACGTG	1 cut(s)	425
AcyI	GRCGYC	1 cut(s)	188
AdeI	CACNNNGTG	1 cut(s)	581
AfaI	GTAC	5 cut(s)	74, 805, 1207, 1642, 1992
AfiI	CCNNNNNNNGG	5 cut(s)	51, 90, 725, 1876, 2036
AflIII	ACRYGT	1 cut(s)	422
AgeI	ACCGGT	1 cut(s)	1089
AhdI	GACNNNNNGTC	1 cut(s)	145
AjnI	CCWGG	3 cut(s)	1633, 1966, 2029
AjuI	GAANNNNNNNTTGG	4 cut(s)	1866, 1898, 1965, 1997
AluBI	AGCT	8 cut(s)	360, 649, 992, 1181, 1430, 1488, 1655, 1678
AluI	AGCT	8 cut(s)	360, 649, 992, 1181, 1430, 1488, 1655, 1678
Alw21I	GWGCWC	2 cut(s)	267, 1680
Alw26I	GTCTC	3 cut(s)	326, 456, 1251
AlwI	GGATC	2 cut(s)	539, 710
AlwNI	CAGNNNCTG	1 cut(s)	896
Aor13HI	TCCGGA	1 cut(s)	609
AoxI	GGCC	5 cut(s)	255, 287, 1104, 1340, 1707
ApeKI	GCWGC	9 cut(s)	9, 58, 61, 64, 67, 118, 127, 157, 896
ApoI	RAATTY	3 cut(s)	845, 1213, 1364
AsiGI	ACCGGT	1 cut(s)	1089
Asp700I	GAANNNNTTC	1 cut(s)	1477
AspLEI	GCGC	5 cut(s)	29, 44, 173, 1041, 1614
AspS9I	GGNCC	6 cut(s)	199, 240, 1031, 1341, 1707, 2051
AsuC2I	CCSGG	2 cut(s)	549, 1035
AsuHPI	GGTGA	7 cut(s)	692, 775, 932, 1248, 1436, 1835, 1859
AvaII	GGWCC	4 cut(s)	199, 240, 1031, 2051
AxyI	CCTNAGG	1 cut(s)	1623
BanII	GRGCYC	1 cut(s)	1680
BbrPI	CACGTG	1 cut(s)	425
BbsI	GAAGAC	3 cut(s)	761, 1275, 1339
Bbv12I	GWGCWC	2 cut(s)	267, 1680
BbvCI	CCTCAGC	1 cut(s)	321
BbvI	GCAGC	9 cut(s)	21, 70, 73, 76, 79, 130, 139, 169, 883
BccI	CCATC	6 cut(s)	479, 1016, 1115, 1141, 1856, 2042
BciT130I	CCWGG	3 cut(s)	1635, 1968, 2031
BclI	TGATCA	2 cut(s)	342, 1894
BcnI	CCSGG	2 cut(s)	549, 1035
BcoDI	GTCTC	3 cut(s)	326, 456, 1251
BfaI	CTAG	6 cut(s)	51, 801, 1185, 1482, 1566, 1644
BfmI	CTRYAG	1 cut(s)	900
BfoI	RGCGCY	2 cut(s)	174, 1042
BglII	AGATCT	1 cut(s)	490
Bme1390I	CCNGG	5 cut(s)	549, 1035, 1635, 1968, 2031
Bme18I	GGWCC	4 cut(s)	199, 240, 1031, 2051
BmeRI	GACNNNNNGTC	1 cut(s)	145
BmgT120I	GGNCC	6 cut(s)	199, 240, 1031, 1341, 1707, 2051
BmiI	GGNNCC	3 cut(s)	201, 787, 1343
BmrFI	CCNGG	5 cut(s)	549, 1035, 1635, 1968, 2031
BmsI	GCATC	4 cut(s)	1381, 1798, 1799, 2065
BoxI	GACNNNNGTC	1 cut(s)	2049
BpiI	GAAGAC	3 cut(s)	761, 1275, 1339
BpmI	CTGGAG	2 cut(s)	859, 1664
Bpu10I	CCTNAGC	2 cut(s)	321, 1140
BpuEI	CTTGAG	1 cut(s)	382
BpuMI	CCSGG	2 cut(s)	549, 1035
BsaAI	YACGTR	1 cut(s)	425
BsaBI	GATNNNNATC	1 cut(s)	489
BsaHI	GRCGYC	1 cut(s)	188
BsaJI	CCNNGG	8 cut(s)	45, 89, 224, 673, 1034, 1966, 1967, 2029
BsaWI	WCCGGW	3 cut(s)	237, 609, 1089
BsaXI	ACNNNNNCTCC	2 cut(s)	5, 35
Bsc4I	CCNNNNNNNGG	5 cut(s)	51, 90, 725, 1876, 2036
Bse118I	RCCGGY	1 cut(s)	1089
Bse1I	ACTGG	6 cut(s)	470, 707, 814, 876, 1572, 1681
Bse21I	CCTNAGG	1 cut(s)	1623
Bse3DI	GCAATG	2 cut(s)	167, 1195
Bse8I	GATNNNNATC	1 cut(s)	489
BseAI	TCCGGA	1 cut(s)	609
BseBI	CCWGG	3 cut(s)	1635, 1968, 2031
BseDI	CCNNGG	8 cut(s)	45, 89, 224, 673, 1034, 1966, 1967, 2029
BseGI	GGATG	3 cut(s)	1027, 1133, 2086
BseJI	GATNNNNATC	1 cut(s)	489
BseLI	CCNNNNNNNGG	5 cut(s)	51, 90, 725, 1876, 2036
BseMI	GCAATG	2 cut(s)	167, 1195
BseMII	CTCAG	5 cut(s)	312, 750, 1131, 1767, 1806
BseNI	ACTGG	6 cut(s)	470, 707, 814, 876, 1572, 1681
BseRI	GAGGAG	5 cut(s)	1483, 1517, 1550, 1559, 1562
BseX3I	CGGCCG	1 cut(s)	287
BseXI	GCAGC	9 cut(s)	21, 70, 73, 76, 79, 130, 139, 169, 883
Bsh1236I	CGCG	5 cut(s)	27, 42, 47, 226, 1614
Bsh1285I	CGRYCG	2 cut(s)	290, 1618
BshFI	GGCC	5 cut(s)	257, 289, 1106, 1342, 1709
BshTI	ACCGGT	1 cut(s)	1089
BsiEI	CGRYCG	2 cut(s)	290, 1618
BsiHKAI	GWGCWC	2 cut(s)	267, 1680
BsiSI	CCGG	5 cut(s)	238, 549, 610, 1034, 1090
BslI	CCNNNNNNNGG	5 cut(s)	51, 90, 725, 1876, 2036
BsmAI	GTCTC	3 cut(s)	326, 456, 1251
BsnI	GGCC	5 cut(s)	257, 289, 1106, 1342, 1709
Bsp1286I	GDGCHC	2 cut(s)	267, 1680
Bsp13I	TCCGGA	1 cut(s)	609
Bsp1407I	TGTACA	1 cut(s)	1990
Bsp143I	GATC	7 cut(s)	180, 342, 490, 544, 715, 1795, 1894
BspANI	GGCC	5 cut(s)	257, 289, 1106, 1342, 1709
BspCNI	CTCAG	5 cut(s)	313, 751, 1132, 1768, 1807
BspEI	TCCGGA	1 cut(s)	609
BspFNI	CGCG	5 cut(s)	27, 42, 47, 226, 1614
BspLI	GGNNCC	3 cut(s)	201, 787, 1343
BspPI	GGATC	2 cut(s)	539, 710
BsrDI	GCAATG	2 cut(s)	167, 1195
BsrFI	RCCGGY	1 cut(s)	1089
BsrGI	TGTACA	1 cut(s)	1990
BsrI	ACTGG	6 cut(s)	470, 707, 814, 876, 1572, 1681
BssAI	RCCGGY	1 cut(s)	1089
BssECI	CCNNGG	8 cut(s)	45, 89, 224, 673, 1034, 1966, 1967, 2029
BssMI	GATC	7 cut(s)	180, 342, 490, 544, 715, 1795, 1894
BssNI	GRCGYC	1 cut(s)	188
BssT1I	CCWWGG	1 cut(s)	673
Bst2UI	CCWGG	3 cut(s)	1635, 1968, 2031
Bst4CI	ACNGT	6 cut(s)	442, 826, 1245, 1350, 1406, 1924
Bst6I	CTCTTC	3 cut(s)	1050, 1527, 1536
BstACI	GRCGYC	1 cut(s)	188
BstAUI	TGTACA	1 cut(s)	1990
BstBAI	YACGTR	1 cut(s)	425
BstC8I	GCNNGC	3 cut(s)	31, 81, 175
BstDEI	CTNAG	7 cut(s)	321, 759, 1140, 1623, 1691, 1776, 1815
BstDSI	CCRYGG	2 cut(s)	45, 224
BstEII	GGTNACC	1 cut(s)	1865
BstENI	CCTNNNNNAGG	1 cut(s)	2034
BstF5I	GGATG	3 cut(s)	1027, 1133, 2086
BstFNI	CGCG	5 cut(s)	27, 42, 47, 226, 1614
BstH2I	RGCGCY	2 cut(s)	174, 1042
BstHHI	GCGC	5 cut(s)	29, 44, 173, 1041, 1614
BstKTI	GATC	7 cut(s)	183, 345, 493, 547, 718, 1798, 1897
BstMAI	GTCTC	3 cut(s)	326, 456, 1251
BstMBI	GATC	7 cut(s)	180, 342, 490, 544, 715, 1795, 1894
BstMCI	CGRYCG	2 cut(s)	290, 1618
BstNI	CCWGG	3 cut(s)	1635, 1968, 2031
BstNSI	RCATGY	3 cut(s)	281, 928, 1229
BstPAI	GACNNNNGTC	1 cut(s)	2049
BstPI	GGTNACC	1 cut(s)	1865
BstSCI	CCNGG	5 cut(s)	547, 1033, 1633, 1966, 2029
BstSFI	CTRYAG	1 cut(s)	900
BstUI	CGCG	5 cut(s)	27, 42, 47, 226, 1614
BstV1I	GCAGC	9 cut(s)	21, 70, 73, 76, 79, 130, 139, 169, 883
BstV2I	GAAGAC	3 cut(s)	761, 1275, 1339
BstX2I	RGATCY	1 cut(s)	490
BstYI	RGATCY	1 cut(s)	490
BstZI	CGGCCG	1 cut(s)	287
Bsu36I	CCTNAGG	1 cut(s)	1623
BsuRI	GGCC	5 cut(s)	257, 289, 1106, 1342, 1709
BtgI	CCRYGG	2 cut(s)	45, 224
BtsCI	GGATG	3 cut(s)	1027, 1133, 2086
BtsIMutI	CAGTG	5 cut(s)	629, 821, 1241, 1411, 1579
Cac8I	GCNNGC	3 cut(s)	31, 81, 175
CaiI	CAGNNNCTG	1 cut(s)	896
CfoI	GCGC	5 cut(s)	29, 44, 173, 1041, 1614
Cfr10I	RCCGGY	1 cut(s)	1089
Cfr13I	GGNCC	6 cut(s)	199, 240, 1031, 1341, 1707, 2051
Cfr42I	CCGCGG	2 cut(s)	48, 227
CseI	GACGC	2 cut(s)	241, 1704
Csp6I	GTAC	5 cut(s)	73, 804, 1206, 1641, 1991
CspAI	ACCGGT	1 cut(s)	1089
CviQI	GTAC	5 cut(s)	73, 804, 1206, 1641, 1991
DdeI	CTNAG	7 cut(s)	321, 759, 1140, 1623, 1691, 1776, 1815
DpnI	GATC	7 cut(s)	182, 344, 492, 546, 717, 1797, 1896
DpnII	GATC	7 cut(s)	180, 342, 490, 544, 715, 1795, 1894
DraIII	CACNNNGTG	1 cut(s)	581
DrdI	GACNNNNNNGTC	1 cut(s)	238
DriI	GACNNNNNGTC	1 cut(s)	145
DseDI	GACNNNNNNGTC	1 cut(s)	238
EaeI	YGGCCR	1 cut(s)	287
EagI	CGGCCG	1 cut(s)	287
Eam1104I	CTCTTC	3 cut(s)	1050, 1527, 1536
Eam1105I	GACNNNNNGTC	1 cut(s)	145
EarI	CTCTTC	3 cut(s)	1050, 1527, 1536
EciI	GGCGGA	1 cut(s)	533
Ecl136II	GAGCTC	1 cut(s)	1678
EclXI	CGGCCG	1 cut(s)	287
Eco130I	CCWWGG	1 cut(s)	673
Eco24I	GRGCYC	1 cut(s)	1680
Eco32I	GATATC	1 cut(s)	607
Eco47I	GGWCC	4 cut(s)	199, 240, 1031, 2051
Eco52I	CGGCCG	1 cut(s)	287
Eco53kI	GAGCTC	1 cut(s)	1678
Eco57I	CTGAAG	3 cut(s)	992, 1512, 1551
Eco72I	CACGTG	1 cut(s)	425
Eco81I	CCTNAGG	1 cut(s)	1623
Eco91I	GGTNACC	1 cut(s)	1865
EcoICRI	GAGCTC	1 cut(s)	1678
EcoNI	CCTNNNNNAGG	1 cut(s)	2034
EcoO109I	RGGNCCY	1 cut(s)	1341
EcoO65I	GGTNACC	1 cut(s)	1865
EcoRII	CCWGG	3 cut(s)	1633, 1966, 2029
EcoRV	GATATC	1 cut(s)	607
EcoT14I	CCWWGG	1 cut(s)	673
EcoT22I	ATGCAT	1 cut(s)	1792
EcoT38I	GRGCYC	1 cut(s)	1680
ErhI	CCWWGG	1 cut(s)	673
FalI	AAGNNNNNCTT	2 cut(s)	657, 689
FauI	CCCGC	4 cut(s)	14, 32, 158, 210
FbaI	TGATCA	2 cut(s)	342, 1894
FokI	GGATG	2 cut(s)	1034, 1120
FriOI	GRGCYC	1 cut(s)	1680
FspBI	CTAG	6 cut(s)	51, 801, 1185, 1482, 1566, 1644
GlaI	GCGC	5 cut(s)	28, 43, 172, 1040, 1613
GsuI	CTGGAG	2 cut(s)	859, 1664
HaeII	RGCGCY	2 cut(s)	174, 1042
HaeIII	GGCC	5 cut(s)	257, 289, 1106, 1342, 1709
HapII	CCGG	5 cut(s)	238, 549, 610, 1034, 1090
HgaI	GACGC	2 cut(s)	241, 1704
HhaI	GCGC	5 cut(s)	29, 44, 173, 1041, 1614
Hin1I	GRCGYC	1 cut(s)	188
Hin6I	GCGC	5 cut(s)	27, 42, 171, 1039, 1612
HinP1I	GCGC	5 cut(s)	27, 42, 171, 1039, 1612
HindIII	AAGCTT	1 cut(s)	1179
HinfI	GANTC	7 cut(s)	143, 394, 683, 693, 1559, 1751, 1847
HpaII	CCGG	5 cut(s)	238, 549, 610, 1034, 1090
HphI	GGTGA	7 cut(s)	692, 775, 932, 1248, 1436, 1835, 1859
Hpy166II	GTNNAC	5 cut(s)	199, 231, 373, 949, 1991
Hpy188I	TCNGA	8 cut(s)	1306, 1384, 1492, 1750, 1756, 1795, 1807, 1852
Hpy188III	TCNNGA	8 cut(s)	184, 610, 743, 851, 1049, 1111, 1529, 1844
Hpy8I	GTNNAC	5 cut(s)	199, 231, 373, 949, 1991
Hpy99I	CGWCG	4 cut(s)	143, 151, 154, 193
HpyAV	CCTTC	6 cut(s)	94, 106, 382, 806, 937, 1487
HpyCH4III	ACNGT	6 cut(s)	442, 826, 1245, 1350, 1406, 1924
HpyCH4IV	ACGT	6 cut(s)	188, 369, 424, 1459, 1639, 2002
HpyCH4V	TGCA	9 cut(s)	33, 58, 450, 482, 830, 1358, 1394, 1790, 1811
HpyF3I	CTNAG	7 cut(s)	321, 759, 1140, 1623, 1691, 1776, 1815
HpySE526I	ACGT	6 cut(s)	188, 369, 424, 1459, 1639, 2002
Hsp92I	GRCGYC	1 cut(s)	188
HspAI	GCGC	5 cut(s)	27, 42, 171, 1039, 1612
Kpn2I	TCCGGA	1 cut(s)	609
Ksp22I	TGATCA	2 cut(s)	342, 1894
KspI	CCGCGG	2 cut(s)	48, 227
Kzo9I	GATC	7 cut(s)	180, 342, 490, 544, 715, 1795, 1894
LmnI	GCTCC	5 cut(s)	115, 168, 240, 1002, 1683
Lsp1109I	GCAGC	9 cut(s)	21, 70, 73, 76, 79, 130, 139, 169, 883
LweI	GCATC	4 cut(s)	1381, 1798, 1799, 2065
MaeI	CTAG	6 cut(s)	51, 801, 1185, 1482, 1566, 1644
MaeII	ACGT	6 cut(s)	188, 369, 424, 1459, 1639, 2002
MaeIII	GTNAC	8 cut(s)	184, 365, 403, 920, 1049, 1063, 1823, 1865
MalI	GATC	7 cut(s)	182, 344, 492, 546, 717, 1797, 1896
MboI	GATC	7 cut(s)	180, 342, 490, 544, 715, 1795, 1894
MfeI	CAATTG	1 cut(s)	218
MflI	RGATCY	1 cut(s)	490
MhlI	GDGCHC	2 cut(s)	267, 1680
MlyI	GAGTC	1 cut(s)	152
MmeI	TCCRAC	2 cut(s)	838, 1963
Mph1103I	ATGCAT	1 cut(s)	1792
MroI	TCCGGA	1 cut(s)	609
MroXI	GAANNNNTTC	1 cut(s)	1477
MseI	TTAA	3 cut(s)	1451, 1602, 1857
MslI	CAYNNNNRTG	3 cut(s)	814, 1224, 1806
MspA1I	CMGCKG	3 cut(s)	47, 226, 292
MspI	CCGG	5 cut(s)	238, 549, 610, 1034, 1090
MspR9I	CCNGG	5 cut(s)	549, 1035, 1635, 1968, 2031
MunI	CAATTG	1 cut(s)	218
MvaI	CCWGG	3 cut(s)	1635, 1968, 2031
MvnI	CGCG	5 cut(s)	27, 42, 47, 226, 1614
NciI	CCSGG	2 cut(s)	549, 1035
NdeII	GATC	7 cut(s)	180, 342, 490, 544, 715, 1795, 1894
NlaIV	GGNNCC	3 cut(s)	201, 787, 1343
NmeAIII	GCCGAG	4 cut(s)	109, 114, 296, 334
NmuCI	GTSAC	8 cut(s)	184, 365, 403, 920, 1049, 1063, 1823, 1865
NsiI	ATGCAT	1 cut(s)	1792
NspI	RCATGY	3 cut(s)	281, 928, 1229
PasI	CCCWGGG	1 cut(s)	1967
PdmI	GAANNNNTTC	1 cut(s)	1477
PfeI	GAWTC	6 cut(s)	394, 683, 693, 1559, 1751, 1847
PflMI	CCANNNNNTGG	2 cut(s)	725, 1876
PinAI	ACCGGT	1 cut(s)	1089
PleI	GAGTC	1 cut(s)	151
PmaCI	CACGTG	1 cut(s)	425
PmlI	CACGTG	1 cut(s)	425
PpsI	GAGTC	1 cut(s)	151
Ppu21I	YACGTR	1 cut(s)	425
PshAI	GACNNNNGTC	1 cut(s)	2049
Psp124BI	GAGCTC	1 cut(s)	1680
Psp6I	CCWGG	3 cut(s)	1633, 1966, 2029
PspCI	CACGTG	1 cut(s)	425
PspEI	GGTNACC	1 cut(s)	1865
PspGI	CCWGG	3 cut(s)	1633, 1966, 2029
PspN4I	GGNNCC	3 cut(s)	201, 787, 1343
PspPI	GGNCC	6 cut(s)	199, 240, 1031, 1341, 1707, 2051
PstNI	CAGNNNCTG	1 cut(s)	896
PsuI	RGATCY	1 cut(s)	490
RsaI	GTAC	5 cut(s)	74, 805, 1207, 1642, 1992
RsaNI	GTAC	5 cut(s)	73, 804, 1206, 1641, 1991
RseI	CAYNNNNRTG	3 cut(s)	814, 1224, 1806
SacI	GAGCTC	1 cut(s)	1680
SacII	CCGCGG	2 cut(s)	48, 227
SaqAI	TTAA	3 cut(s)	1451, 1602, 1857
Sau3AI	GATC	7 cut(s)	180, 342, 490, 544, 715, 1795, 1894
Sau96I	GGNCC	6 cut(s)	199, 240, 1031, 1341, 1707, 2051
SchI	GAGTC	1 cut(s)	152
ScrFI	CCNGG	5 cut(s)	549, 1035, 1635, 1968, 2031
SduI	GDGCHC	2 cut(s)	267, 1680
SfaNI	GCATC	4 cut(s)	1381, 1798, 1799, 2065
SfcI	CTRYAG	1 cut(s)	900
Sfr303I	CCGCGG	2 cut(s)	48, 227
SgrBI	CCGCGG	2 cut(s)	48, 227
SinI	GGWCC	4 cut(s)	199, 240, 1031, 2051
SmiMI	CAYNNNNRTG	3 cut(s)	814, 1224, 1806
SmlI	CTYRAG	1 cut(s)	361
SmoI	CTYRAG	1 cut(s)	361
SspMI	CTAG	6 cut(s)	51, 801, 1185, 1482, 1566, 1644
SstI	GAGCTC	1 cut(s)	1680
StyD4I	CCNGG	5 cut(s)	547, 1033, 1633, 1966, 2029
StyI	CCWWGG	1 cut(s)	673
TaaI	ACNGT	6 cut(s)	442, 826, 1245, 1350, 1406, 1924
TaiI	ACGT	6 cut(s)	191, 372, 427, 1462, 1642, 2005
TaqI	TCGA	2 cut(s)	1594, 1798
TatI	WGTACW	2 cut(s)	803, 1990
TauI	GCSGC	8 cut(s)	47, 50, 107, 124, 127, 157, 226, 292
TfiI	GAWTC	6 cut(s)	394, 683, 693, 1559, 1751, 1847
Tru1I	TTAA	3 cut(s)	1451, 1602, 1857
Tru9I	TTAA	3 cut(s)	1451, 1602, 1857
TscAI	CASTG	5 cut(s)	636, 821, 1248, 1411, 1579
TseFI	GTSAC	8 cut(s)	184, 365, 403, 920, 1049, 1063, 1823, 1865
TseI	GCWGC	9 cut(s)	9, 58, 61, 64, 67, 118, 127, 157, 896
Tsp45I	GTSAC	8 cut(s)	184, 365, 403, 920, 1049, 1063, 1823, 1865
TspGWI	ACGGA	2 cut(s)	250, 545
TspRI	CASTG	5 cut(s)	636, 821, 1248, 1411, 1579
Van91I	CCANNNNNTGG	2 cut(s)	725, 1876
VpaK11BI	GGWCC	4 cut(s)	199, 240, 1031, 2051
XagI	CCTNNNNNAGG	1 cut(s)	2034
XapI	RAATTY	3 cut(s)	845, 1213, 1364
XceI	RCATGY	3 cut(s)	281, 928, 1229
XcmI	CCANNNNNNNNNTGG	1 cut(s)	250
XmnI	GAANNNNTTC	1 cut(s)	1477
XspI	CTAG	6 cut(s)	51, 801, 1185, 1482, 1566, 1644
ZraI	GACGTC	1 cut(s)	189
Zsp2I	ATGCAT	1 cut(s)	1792

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.