WSTF, HB1, Itc1p, MBD9 motif 1
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G18950 AT1G18950 AT1G18950 |
| fragaria_vesca | FvH4_5g15860 FvH4_5g15860 FvH4_5g15860 |
| malus_domestica | MD06G1185100.v1.1 MD14G1191000.v1.1 |
| prunus_persica | Prupe.5G183900_v2.0.a1 Prupe.5G183900_v2.0.a1 |
| pyrus_communis | pycom06g16430 pycom14g15870 |
| rosa_chinensis | RchiOBHm_Chr7g0180231 |
| rosa_laevigata | RLG00000005283 |
| rosa_multiflora | Rmu_co8416195.1_g000001 Rmu_sc0002953.1_g000006 Rmu_sc0011963.1_g000009 |
| rosa_roxburghii | Rroxscaffold_3G00273040 |
| rosa_rugosa | Rorug06G0431700 |
| rosa_samantha | Rh7AG031900 Rh7BG032000 Rh7CG033800 Rh7DG032300 |
| rosa_wichuraiana | Rw7G002660 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 854 |
| AccBSI | CCGCTC | 2 cut(s) | 176, 369 |
| AccII | CGCG | 3 cut(s) | 153, 168, 538 |
| AccIII | TCCGGA | 1 cut(s) | 1267 |
| AclWI | GGATC | 6 cut(s) | 22, 36, 627, 668, 839, 1449 |
| AcoI | YGGCCR | 1 cut(s) | 416 |
| AcsI | RAATTY | 3 cut(s) | 974, 1342, 1490 |
| AcuI | CTGAAG | 4 cut(s) | 782, 1121, 1326, 1769 |
| AcvI | CACGTG | 1 cut(s) | 554 |
| AcyI | GRCGYC | 1 cut(s) | 317 |
| AdeI | CACNNNGTG | 1 cut(s) | 710 |
| AfaI | GTAC | 3 cut(s) | 393, 1747, 2091 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 109, 132, 177, 225, 854, 2135 |
| AflIII | ACRYGT | 3 cut(s) | 551, 1200, 1354 |
| AgeI | ACCGGT | 1 cut(s) | 1218 |
| AgsI | TTSAA | 8 cut(s) | 700, 776, 1045, 1499, 1658, 1729, 1938, 2003 |
| AjnI | CCWGG | 6 cut(s) | 131, 676, 1162, 1738, 2065, 2128 |
| AluBI | AGCT | 6 cut(s) | 586, 1121, 1310, 1760, 1783, 2122 |
| AluI | AGCT | 6 cut(s) | 586, 1121, 1310, 1760, 1783, 2122 |
| Alw26I | GTCTC | 8 cut(s) | 9, 261, 288, 455, 585, 1044, 1792, 2009 |
| AlwI | GGATC | 6 cut(s) | 22, 36, 627, 668, 839, 1449 |
| Ama87I | CYCGRG | 1 cut(s) | 1003 |
| Aor13HI | TCCGGA | 1 cut(s) | 1267 |
| AoxI | GGCC | 8 cut(s) | 99, 105, 111, 416, 1301, 1466, 1741, 1812 |
| ApoI | RAATTY | 3 cut(s) | 974, 1342, 1490 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1508, 1540 |
| AseI | ATTAAT | 1 cut(s) | 2162 |
| AsiGI | ACCGGT | 1 cut(s) | 1218 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 735, 913, 998, 1603 |
| AspLEI | GCGC | 4 cut(s) | 155, 170, 302, 1170 |
| AsuC2I | CCSGG | 2 cut(s) | 104, 110 |
| AsuHPI | GGTGA | 3 cut(s) | 821, 1377, 1562 |
| AsuNHI | GCTAGC | 1 cut(s) | 2122 |
| AvaI | CYCGRG | 1 cut(s) | 1003 |
| AvaII | GGWCC | 7 cut(s) | 360, 682, 1160, 1221, 1270, 1972, 2150 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 549, 582 |
| BanII | GRGCYC | 1 cut(s) | 57 |
| BbrPI | CACGTG | 1 cut(s) | 554 |
| BbsI | GAAGAC | 1 cut(s) | 1465 |
| BccI | CCATC | 6 cut(s) | 511, 1145, 1232, 1270, 1952, 2141 |
| BceAI | ACGGC | 5 cut(s) | 20, 218, 242, 480, 1728 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 395, 429 |
| BciT130I | CCWGG | 6 cut(s) | 133, 678, 1164, 1740, 2067, 2130 |
| BciVI | GTATCC | 1 cut(s) | 174 |
| BclI | TGATCA | 2 cut(s) | 471, 1990 |
| BcnI | CCSGG | 2 cut(s) | 104, 110 |
| BcoDI | GTCTC | 8 cut(s) | 9, 261, 288, 455, 585, 1044, 1792, 2009 |
| BfaI | CTAG | 7 cut(s) | 980, 1031, 1314, 1608, 1692, 1749, 2123 |
| BfoI | RGCGCY | 2 cut(s) | 303, 1171 |
| BfuI | GTATCC | 1 cut(s) | 174 |
| Bme1390I | CCNGG | 8 cut(s) | 104, 110, 133, 678, 1164, 1740, 2067, 2130 |
| Bme18I | GGWCC | 7 cut(s) | 360, 682, 1160, 1221, 1270, 1972, 2150 |
| BmeT110I | CYCGRG | 1 cut(s) | 1003 |
| BmrFI | CCNGG | 8 cut(s) | 104, 110, 133, 678, 1164, 1740, 2067, 2130 |
| BmrI | ACTGGG | 1 cut(s) | 924 |
| BmsI | GCATC | 7 cut(s) | 104, 944, 1382, 1903, 1904, 2164, 2170 |
| BmtI | GCTAGC | 1 cut(s) | 2126 |
| BmuI | ACTGGG | 1 cut(s) | 924 |
| BpiI | GAAGAC | 1 cut(s) | 1465 |
| BpuMI | CCSGG | 2 cut(s) | 104, 110 |
| BsaAI | YACGTR | 1 cut(s) | 554 |
| BsaHI | GRCGYC | 1 cut(s) | 317 |
| BsaJI | CCNNGG | 7 cut(s) | 102, 108, 677, 1163, 2065, 2066, 2128 |
| BsaWI | WCCGGW | 2 cut(s) | 1218, 1267 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 131, 161, 1107, 1137 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 109, 132, 177, 225, 854, 2135 |
| Bse118I | RCCGGY | 1 cut(s) | 1218 |
| Bse1I | ACTGG | 4 cut(s) | 599, 836, 930, 1917 |
| Bse3DI | GCAATG | 1 cut(s) | 296 |
| BseAI | TCCGGA | 1 cut(s) | 1267 |
| BseBI | CCWGG | 6 cut(s) | 133, 678, 1164, 1740, 2067, 2130 |
| BseDI | CCNNGG | 7 cut(s) | 102, 108, 677, 1163, 2065, 2066, 2128 |
| BseGI | GGATG | 2 cut(s) | 1156, 2185 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 109, 132, 177, 225, 854, 2135 |
| BseMI | GCAATG | 1 cut(s) | 296 |
| BseMII | CTCAG | 8 cut(s) | 92, 429, 578, 981, 1787, 1866, 1872, 2004 |
| BseNI | ACTGG | 4 cut(s) | 599, 836, 930, 1917 |
| BseRI | GAGGAG | 3 cut(s) | 467, 1115, 1643 |
| BseX3I | CGGCCG | 1 cut(s) | 416 |
| BseYI | CCCAGC | 3 cut(s) | 31, 57, 214 |
| BsgI | GTGCAG | 1 cut(s) | 142 |
| Bsh1236I | CGCG | 3 cut(s) | 153, 168, 538 |
| Bsh1285I | CGRYCG | 2 cut(s) | 281, 419 |
| BshFI | GGCC | 8 cut(s) | 101, 107, 113, 418, 1303, 1468, 1743, 1814 |
| BshTI | ACCGGT | 1 cut(s) | 1218 |
| BsiEI | CGRYCG | 2 cut(s) | 281, 419 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1003 |
| BsiSI | CCGG | 5 cut(s) | 50, 104, 110, 1219, 1268 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 109, 132, 177, 225, 854, 2135 |
| BsmAI | GTCTC | 8 cut(s) | 9, 261, 288, 455, 585, 1044, 1792, 2009 |
| BsmBI | CGTCTC | 4 cut(s) | 261, 288, 455, 1792 |
| BsnI | GGCC | 8 cut(s) | 101, 107, 113, 418, 1303, 1468, 1743, 1814 |
| BsoBI | CYCGRG | 1 cut(s) | 1003 |
| Bsp1286I | GDGCHC | 1 cut(s) | 57 |
| Bsp13I | TCCGGA | 1 cut(s) | 1267 |
| Bsp1407I | TGTACA | 1 cut(s) | 2089 |
| BspANI | GGCC | 8 cut(s) | 101, 107, 113, 418, 1303, 1468, 1743, 1814 |
| BspCNI | CTCAG | 8 cut(s) | 91, 430, 579, 982, 1788, 1865, 1873, 2005 |
| BspEI | TCCGGA | 1 cut(s) | 1267 |
| BspFNI | CGCG | 3 cut(s) | 153, 168, 538 |
| BspOI | GCTAGC | 1 cut(s) | 2126 |
| BspPI | GGATC | 6 cut(s) | 22, 36, 627, 668, 839, 1449 |
| BsrBI | CCGCTC | 2 cut(s) | 176, 369 |
| BsrDI | GCAATG | 1 cut(s) | 296 |
| BsrFI | RCCGGY | 1 cut(s) | 1218 |
| BsrGI | TGTACA | 1 cut(s) | 2089 |
| BsrI | ACTGG | 4 cut(s) | 599, 836, 930, 1917 |
| BssAI | RCCGGY | 1 cut(s) | 1218 |
| BssECI | CCNNGG | 7 cut(s) | 102, 108, 677, 1163, 2065, 2066, 2128 |
| BssNI | GRCGYC | 1 cut(s) | 317 |
| Bst2UI | CCWGG | 6 cut(s) | 133, 678, 1164, 1740, 2067, 2130 |
| Bst4CI | ACNGT | 6 cut(s) | 571, 955, 1147, 1476, 1532, 2023 |
| Bst6I | CTCTTC | 3 cut(s) | 1179, 1656, 1665 |
| BstACI | GRCGYC | 1 cut(s) | 317 |
| BstAUI | TGTACA | 1 cut(s) | 2089 |
| BstBAI | YACGTR | 1 cut(s) | 554 |
| BstC8I | GCNNGC | 6 cut(s) | 157, 231, 304, 1059, 1699, 2124 |
| BstDEI | CTNAG | 8 cut(s) | 78, 438, 587, 990, 1796, 1852, 1881, 2013 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 130, 2133 |
| BstF5I | GGATG | 2 cut(s) | 1156, 2185 |
| BstFNI | CGCG | 3 cut(s) | 153, 168, 538 |
| BstH2I | RGCGCY | 2 cut(s) | 303, 1171 |
| BstHHI | GCGC | 4 cut(s) | 155, 170, 302, 1170 |
| BstMAI | GTCTC | 8 cut(s) | 9, 261, 288, 455, 585, 1044, 1792, 2009 |
| BstMCI | CGRYCG | 2 cut(s) | 281, 419 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 61, 150, 165, 196, 259, 303, 1105, 2041 |
| BstNI | CCWGG | 6 cut(s) | 133, 678, 1164, 1740, 2067, 2130 |
| BstNSI | RCATGY | 2 cut(s) | 1057, 1358 |
| BstSCI | CCNGG | 8 cut(s) | 102, 108, 131, 676, 1162, 1738, 2065, 2128 |
| BstUI | CGCG | 3 cut(s) | 153, 168, 538 |
| BstV2I | GAAGAC | 1 cut(s) | 1465 |
| BstX2I | RGATCY | 1 cut(s) | 619 |
| BstYI | RGATCY | 1 cut(s) | 619 |
| BstZI | CGGCCG | 1 cut(s) | 416 |
| BsuI | GTATCC | 1 cut(s) | 174 |
| BsuRI | GGCC | 8 cut(s) | 101, 107, 113, 418, 1303, 1468, 1743, 1814 |
| BtgZI | GCGATG | 1 cut(s) | 1359 |
| BtsCI | GGATG | 2 cut(s) | 1156, 2185 |
| BtsIMutI | CAGTG | 6 cut(s) | 567, 758, 937, 950, 1537, 1924 |
| Cac8I | GCNNGC | 6 cut(s) | 157, 231, 304, 1059, 1699, 2124 |
| CfoI | GCGC | 4 cut(s) | 155, 170, 302, 1170 |
| Cfr10I | RCCGGY | 1 cut(s) | 1218 |
| CseI | GACGC | 3 cut(s) | 325, 1526, 1809 |
| Csp6I | GTAC | 3 cut(s) | 392, 1746, 2090 |
| CspAI | ACCGGT | 1 cut(s) | 1218 |
| CviAII | CATG | 4 cut(s) | 641, 767, 1054, 1355 |
| CviQI | GTAC | 3 cut(s) | 392, 1746, 2090 |
| DdeI | CTNAG | 8 cut(s) | 78, 438, 587, 990, 1796, 1852, 1881, 2013 |
| DraIII | CACNNNGTG | 1 cut(s) | 710 |
| EaeI | YGGCCR | 1 cut(s) | 416 |
| EagI | CGGCCG | 1 cut(s) | 416 |
| Eam1104I | CTCTTC | 3 cut(s) | 1179, 1656, 1665 |
| EarI | CTCTTC | 3 cut(s) | 1179, 1656, 1665 |
| EciI | GGCGGA | 2 cut(s) | 464, 662 |
| EclXI | CGGCCG | 1 cut(s) | 416 |
| Eco147I | AGGCCT | 1 cut(s) | 1303 |
| Eco24I | GRGCYC | 1 cut(s) | 57 |
| Eco47I | GGWCC | 7 cut(s) | 360, 682, 1160, 1221, 1270, 1972, 2150 |
| Eco52I | CGGCCG | 1 cut(s) | 416 |
| Eco57I | CTGAAG | 4 cut(s) | 782, 1121, 1326, 1769 |
| Eco72I | CACGTG | 1 cut(s) | 554 |
| Eco88I | CYCGRG | 1 cut(s) | 1003 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 130, 2133 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1467 |
| EcoRI | GAATTC | 1 cut(s) | 974 |
| EcoRII | CCWGG | 6 cut(s) | 131, 676, 1162, 1738, 2065, 2128 |
| EcoT22I | ATGCAT | 1 cut(s) | 1897 |
| EcoT38I | GRGCYC | 1 cut(s) | 57 |
| Esp3I | CGTCTC | 4 cut(s) | 261, 288, 455, 1792 |
| FaeI | CATG | 4 cut(s) | 644, 770, 1057, 1358 |
| FatI | CATG | 4 cut(s) | 640, 766, 1053, 1354 |
| FauI | CCCGC | 2 cut(s) | 158, 345 |
| FbaI | TGATCA | 2 cut(s) | 471, 1990 |
| FokI | GGATG | 1 cut(s) | 1163 |
| FriOI | GRGCYC | 1 cut(s) | 57 |
| FspBI | CTAG | 7 cut(s) | 980, 1031, 1314, 1608, 1692, 1749, 2123 |
| GlaI | GCGC | 4 cut(s) | 154, 169, 301, 1169 |
| GsaI | CCCAGC | 3 cut(s) | 35, 61, 218 |
| HaeII | RGCGCY | 2 cut(s) | 303, 1171 |
| HaeIII | GGCC | 8 cut(s) | 101, 107, 113, 418, 1303, 1468, 1743, 1814 |
| HapII | CCGG | 5 cut(s) | 50, 104, 110, 1219, 1268 |
| HgaI | GACGC | 3 cut(s) | 325, 1526, 1809 |
| HhaI | GCGC | 4 cut(s) | 155, 170, 302, 1170 |
| Hin1I | GRCGYC | 1 cut(s) | 317 |
| Hin1II | CATG | 4 cut(s) | 644, 770, 1057, 1358 |
| Hin6I | GCGC | 4 cut(s) | 153, 168, 300, 1168 |
| HinP1I | GCGC | 4 cut(s) | 153, 168, 300, 1168 |
| HindIII | AAGCTT | 1 cut(s) | 1308 |
| HinfI | GANTC | 6 cut(s) | 11, 812, 822, 1685, 1856, 1952 |
| HpaII | CCGG | 5 cut(s) | 50, 104, 110, 1219, 1268 |
| HphI | GGTGA | 3 cut(s) | 821, 1377, 1562 |
| Hpy166II | GTNNAC | 2 cut(s) | 1078, 2090 |
| Hpy188III | TCNNGA | 8 cut(s) | 8, 697, 872, 1003, 1178, 1268, 1949, 2012 |
| Hpy8I | GTNNAC | 2 cut(s) | 1078, 2090 |
| Hpy99I | CGWCG | 2 cut(s) | 275, 1406 |
| HpyAV | CCTTC | 5 cut(s) | 877, 935, 1066, 1613, 2078 |
| HpyCH4III | ACNGT | 6 cut(s) | 571, 955, 1147, 1476, 1532, 2023 |
| HpyCH4IV | ACGT | 6 cut(s) | 408, 553, 799, 1202, 1585, 2101 |
| HpyCH4V | TGCA | 9 cut(s) | 159, 294, 406, 579, 611, 935, 1061, 1373, 1895 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 61, 150, 165, 196, 259, 303, 1105, 2041 |
| HpyF3I | CTNAG | 8 cut(s) | 78, 438, 587, 990, 1796, 1852, 1881, 2013 |
| HpySE526I | ACGT | 6 cut(s) | 408, 553, 799, 1202, 1585, 2101 |
| Hsp92I | GRCGYC | 1 cut(s) | 317 |
| Hsp92II | CATG | 4 cut(s) | 644, 770, 1057, 1358 |
| HspAI | GCGC | 4 cut(s) | 153, 168, 300, 1168 |
| Kpn2I | TCCGGA | 1 cut(s) | 1267 |
| Ksp22I | TGATCA | 2 cut(s) | 471, 1990 |
| LmnI | GCTCC | 2 cut(s) | 52, 135 |
| LweI | GCATC | 7 cut(s) | 104, 944, 1382, 1903, 1904, 2164, 2170 |
| MaeI | CTAG | 7 cut(s) | 980, 1031, 1314, 1608, 1692, 1749, 2123 |
| MaeII | ACGT | 6 cut(s) | 408, 553, 799, 1202, 1585, 2101 |
| MaeIII | GTNAC | 6 cut(s) | 313, 494, 565, 1178, 1192, 1243 |
| MbiI | CCGCTC | 2 cut(s) | 176, 369 |
| MfeI | CAATTG | 1 cut(s) | 1436 |
| MflI | RGATCY | 1 cut(s) | 619 |
| MhlI | GDGCHC | 1 cut(s) | 57 |
| MlyI | GAGTC | 1 cut(s) | 1865 |
| MmeI | TCCRAC | 1 cut(s) | 438 |
| Mph1103I | ATGCAT | 1 cut(s) | 1897 |
| MroI | TCCGGA | 1 cut(s) | 1267 |
| MroXI | GAANNNNTTC | 4 cut(s) | 735, 913, 998, 1603 |
| MseI | TTAA | 2 cut(s) | 1577, 2162 |
| MslI | CAYNNNNRTG | 3 cut(s) | 943, 1911, 2162 |
| MspA1I | CMGCKG | 2 cut(s) | 322, 421 |
| MspI | CCGG | 5 cut(s) | 50, 104, 110, 1219, 1268 |
| MspR9I | CCNGG | 8 cut(s) | 104, 110, 133, 678, 1164, 1740, 2067, 2130 |
| MunI | CAATTG | 1 cut(s) | 1436 |
| MvaI | CCWGG | 6 cut(s) | 133, 678, 1164, 1740, 2067, 2130 |
| MvnI | CGCG | 3 cut(s) | 153, 168, 538 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 61, 150, 165, 196, 259, 303, 1105, 2041 |
| NciI | CCSGG | 2 cut(s) | 104, 110 |
| NheI | GCTAGC | 1 cut(s) | 2122 |
| NlaIII | CATG | 4 cut(s) | 644, 770, 1057, 1358 |
| NmeAIII | GCCGAG | 2 cut(s) | 244, 425 |
| NmuCI | GTSAC | 4 cut(s) | 313, 494, 565, 1178 |
| NsiI | ATGCAT | 1 cut(s) | 1897 |
| NspI | RCATGY | 2 cut(s) | 1057, 1358 |
| PaeR7I | CTCGAG | 1 cut(s) | 1003 |
| PasI | CCCWGGG | 1 cut(s) | 2066 |
| PceI | AGGCCT | 1 cut(s) | 1303 |
| PciI | ACATGT | 1 cut(s) | 1354 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 796, 2115 |
| PdmI | GAANNNNTTC | 4 cut(s) | 735, 913, 998, 1603 |
| PfeI | GAWTC | 5 cut(s) | 11, 812, 822, 1685, 1952 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 854 |
| PfoI | TCCNGGA | 1 cut(s) | 131 |
| PinAI | ACCGGT | 1 cut(s) | 1218 |
| Ple19I | CGATCG | 1 cut(s) | 281 |
| PleI | GAGTC | 1 cut(s) | 1864 |
| PmaCI | CACGTG | 1 cut(s) | 554 |
| PmlI | CACGTG | 1 cut(s) | 554 |
| PpsI | GAGTC | 1 cut(s) | 1864 |
| Ppu21I | YACGTR | 1 cut(s) | 554 |
| PscI | ACATGT | 1 cut(s) | 1354 |
| PshBI | ATTAAT | 1 cut(s) | 2162 |
| Psp6I | CCWGG | 6 cut(s) | 131, 676, 1162, 1738, 2065, 2128 |
| PspCI | CACGTG | 1 cut(s) | 554 |
| PspFI | CCCAGC | 3 cut(s) | 31, 57, 214 |
| PspGI | CCWGG | 6 cut(s) | 131, 676, 1162, 1738, 2065, 2128 |
| PsuI | RGATCY | 1 cut(s) | 619 |
| PvuI | CGATCG | 1 cut(s) | 281 |
| RsaI | GTAC | 3 cut(s) | 393, 1747, 2091 |
| RsaNI | GTAC | 3 cut(s) | 392, 1746, 2090 |
| RseI | CAYNNNNRTG | 3 cut(s) | 943, 1911, 2162 |
| SaqAI | TTAA | 2 cut(s) | 1577, 2162 |
| SchI | GAGTC | 1 cut(s) | 1865 |
| ScrFI | CCNGG | 8 cut(s) | 104, 110, 133, 678, 1164, 1740, 2067, 2130 |
| SduI | GDGCHC | 1 cut(s) | 57 |
| SfaNI | GCATC | 7 cut(s) | 104, 944, 1382, 1903, 1904, 2164, 2170 |
| Sfr274I | CTCGAG | 1 cut(s) | 1003 |
| SinI | GGWCC | 7 cut(s) | 360, 682, 1160, 1221, 1270, 1972, 2150 |
| SlaI | CTCGAG | 1 cut(s) | 1003 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 943, 1911, 2162 |
| SmlI | CTYRAG | 1 cut(s) | 1003 |
| SmoI | CTYRAG | 1 cut(s) | 1003 |
| SseBI | AGGCCT | 1 cut(s) | 1303 |
| SspI | AATATT | 1 cut(s) | 1966 |
| SspMI | CTAG | 7 cut(s) | 980, 1031, 1314, 1608, 1692, 1749, 2123 |
| StuI | AGGCCT | 1 cut(s) | 1303 |
| StyD4I | CCNGG | 8 cut(s) | 102, 108, 131, 676, 1162, 1738, 2065, 2128 |
| TaaI | ACNGT | 6 cut(s) | 571, 955, 1147, 1476, 1532, 2023 |
| TaiI | ACGT | 6 cut(s) | 411, 556, 802, 1205, 1588, 2104 |
| TaqI | TCGA | 6 cut(s) | 969, 1004, 1444, 1837, 2082, 2109 |
| TatI | WGTACW | 1 cut(s) | 2089 |
| TauI | GCSGC | 4 cut(s) | 173, 176, 322, 421 |
| TfiI | GAWTC | 5 cut(s) | 11, 812, 822, 1685, 1952 |
| Tru1I | TTAA | 2 cut(s) | 1577, 2162 |
| Tru9I | TTAA | 2 cut(s) | 1577, 2162 |
| TscAI | CASTG | 6 cut(s) | 574, 765, 937, 950, 1537, 1924 |
| TseFI | GTSAC | 4 cut(s) | 313, 494, 565, 1178 |
| Tsp45I | GTSAC | 4 cut(s) | 313, 494, 565, 1178 |
| TspDTI | ATGAA | 9 cut(s) | 852, 908, 987, 1365, 1428, 1889, 1917, 1997, 2180 |
| TspGWI | ACGGA | 3 cut(s) | 379, 674, 1034 |
| TspRI | CASTG | 6 cut(s) | 574, 765, 937, 950, 1537, 1924 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 854 |
| VpaK11BI | GGWCC | 7 cut(s) | 360, 682, 1160, 1221, 1270, 1972, 2150 |
| VspI | ATTAAT | 1 cut(s) | 2162 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 130, 2133 |
| XapI | RAATTY | 3 cut(s) | 974, 1342, 1490 |
| XceI | RCATGY | 2 cut(s) | 1057, 1358 |
| XhoI | CTCGAG | 1 cut(s) | 1003 |
| XmnI | GAANNNNTTC | 4 cut(s) | 735, 913, 998, 1603 |
| XspI | CTAG | 7 cut(s) | 980, 1031, 1314, 1608, 1692, 1749, 2123 |
| Zsp2I | ATGCAT | 1 cut(s) | 1897 |