Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr14

Orthogroup ID

OG0007850

Physical Location & Seq

Genomic Coordinates Reverse (-)

18336255 .. 18341917

Gene Structure 5663 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom14g15870.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2196 bp

ATGTCTCTGGAAACTTCCCTTCCTCCGATCCCAGCCGTCCGATCCTCACCGGAGCCCCTACAGCAAGAACAGCCCCCTCAGAACGAAAAAGCGACATCAGCCCCGGCCCCCACGCCTCCCCTGTCCAGGAGCAACCGCCCCTCCCGCGCCTGCACCATACGCGCCGCCGCTCGGATACAGCAGCAGTTCCAGCAGCAGCAGAACCAACCCGCCGAGAAACGGCGAGCCGTCAACAAAAAGGAACAGCAGCAGCTGCAGCAGAGAGACGACGAGTCGTCGTCGCCGCAATGCAGCGGCGCCAGCAAGATTGTGACGCCGCTGGTGGGACCTCCCCCGCCCTCGCAATTGCCGCGCTGGACCCTCCGCTCCATGTGGGAATTGGCTTCCCTACTCAATTTCTTGCACGCTTTTCGGCCGCTGCTGAATATTTCGGCTGAGTTCTCGGTGGAGGAGTTGGAGACGGCTTTGATCACACCAAACGATACTTTGAGTGACATTCACATTCCATTGTTGAAGGCAATTCCTCCAATTACGCGAATGGCACTTACACGTGATACTTGGATCACTGTTTTATGCAGAAAGTTGAGAGACTGGTGGCATTGGGTTGCAGAGGGGGATCTACCCATTGTTGCTTCACATGGGGCGGAGATTGAGGCATATAAAACACTTGAGCCTGGGGTTCGTGTGGTCATCTTGAAAGCACTTTGTGATATCCGCGTTGAGCAAGAAGATATTCGGAACTATATTGACAACTCACTGAAGCATGGAGTTCAACTTTCAGCATTTCGCAAAGAACGTGTTGGAGGTGATTCACAAGGAATATCGTACTGGTATGAAGATGATCCAATAATTGGTTATCGGTTATATCGGGAGATCAGGAAGGTTGATATGAAGAAAGTAAAAGGAAAAGGTTCCCATGTCCTTCCTAGTGCGTCATATCAGTGGGAAACAGTAGCAACCAATTTCGATGAATTCCAAGATGTTTCTGAGAAACTTTTCTCGAGTAAGAATAGAACGGAGGCTTCTCTAGGGAAGAAGTTGAAAGGAGACATGCTTGCAGAGATTGAGAAGGTTCACAAGAGGAAAGAAAGGCAGATGAAGAAGCAACACAGACAAGCTCTCCTCCTTGATAATTTTTTGACTGTGGATGGGCTTGGTCCAGGGCGCTCTCTTCGTGACAGAAAACCTGTAACCTACACTTTTGATGATTATGACCGGTCCATCAATGAGGCAATCAAAGTAACCAAAAAGAAGCAGCCATCTCCGGATCCTTTACAGAAACGAGAGCTAGTTGGGAGACCTGAAGCTTCTAGTAATGGTAAATGGAGTGCTACTACAAATTCCTATGAACATGTAGGATTTAGTGCTGCATCGCCTAAATCACCTGATTATGATGATGATGATGATGATGATGATGGCGAAGAAGATAACAAGTCTGAACAATTGGATCGAAGCAATCGGCGAAGACAGAGGCCCCAACGGTATTCTGCGAAAGACTTTGTTGAAGCAGTTTCAGATAATGATGCAGACTTTGACAGTGATGATGACATAGTTGGTGAGGCTGTATACGATGAGGAATACTTGAAGAAACGTAAAGAGAGAAGAAAGTTTTCTAGTAGCTCTGAAGGAGATGAGGAGTATCATTTTGAGGAAGAAAATGCTGAAGAAGAGGAAGAAGAGGAAATGGAAGATTCCGCAAGTGCCAGTGAGGATAGTGATGAACCCCGAAAATTTAAGAAGTTGCCAGGCCGTACTAGGAGGGAAGCTAAATTGAGGTCTGTTGATGAGCTCCAGTCAGGTTTGAGACGCAGTAAGAGGGCCACCAGAAATCGTATTGATTATCGACAATATGAGTTCTCAGAGTCGGAACCGGAGCCTATGAAACCTGAGAAATCAAATGCATCGGATGGACATTATGATGCCAGTGAAAACGGGGATTATTCAATGGAAAGTCATGATTCAGATGGTAATATTGAGGACCAAGAAATGAAAGTTGGTCAGGCAGTTGAAAATTACCCTGAGACAACAGTTGAGAAAGAGCAAAACCAGCCACCTGAAAAACCAAATAGCCCAGGGGAAGATGAAGTCGAAGGTGTGCAGAAAAGACGTTTCCTCGACCTAAATGAGCTAGCCCCTGGTTCAGGTTTTGACGACGGTCCAAACTCAATAATGAAAGATGATGCGGATGATTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DDT WHIM1

Protein Analysis

732

Amino Acids

83.35

Weight (kDa)

5.05

Isoelectric Point (pI)

63.38

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007850)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18950 AT1G18950 AT1G18950
fragaria_vesca	FvH4_5g15860 FvH4_5g15860 FvH4_5g15860
malus_domestica	MD06G1185100.v1.1 MD14G1191000.v1.1
prunus_persica	Prupe.5G183900_v2.0.a1 Prupe.5G183900_v2.0.a1
pyrus_communis	pycom06g16430 pycom14g15870
rosa_chinensis	RchiOBHm_Chr7g0180231
rosa_laevigata	RLG00000005283
rosa_multiflora	Rmu_co8416195.1_g000001 Rmu_sc0002953.1_g000006 Rmu_sc0011963.1_g000009
rosa_roxburghii	Rroxscaffold_3G00273040
rosa_rugosa	Rorug06G0431700
rosa_samantha	Rh7AG031900 Rh7BG032000 Rh7CG033800 Rh7DG032300
rosa_wichuraiana	Rw7G002660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	296
AccB7I	CCANNNNNTGG	1 cut(s)	851
AccBSI	CCGCTC	2 cut(s)	170, 366
AccI	GTMKAC	1 cut(s)	1566
AccII	CGCG	5 cut(s)	147, 162, 352, 535, 717
AccIII	TCCGGA	1 cut(s)	1264
AclWI	GGATC	8 cut(s)	22, 36, 569, 624, 836, 1262, 1275, 1455
AcoI	YGGCCR	1 cut(s)	413
AcsI	RAATTY	3 cut(s)	971, 1339, 1730
AcuI	CTGAAG	4 cut(s)	779, 1323, 1644, 1683
AcvI	CACGTG	1 cut(s)	551
AcyI	GRCGYC	2 cut(s)	297, 314
AdeI	CACNNNGTG	1 cut(s)	707
AfaI	GTAC	2 cut(s)	827, 1753
AfiI	CCNNNNNNNGG	6 cut(s)	126, 171, 219, 323, 851, 2141
AflIII	ACRYGT	3 cut(s)	548, 796, 1351
AgeI	ACCGGT	1 cut(s)	1215
AgsI	TTSAA	8 cut(s)	514, 697, 773, 1042, 1505, 1585, 1944, 2009
AhdI	GACNNNNNGTC	2 cut(s)	271, 274
AjnI	CCWGG	6 cut(s)	125, 673, 1159, 1744, 2071, 2134
AjuI	GAANNNNNNNTTGG	2 cut(s)	1977, 2009
AluBI	AGCT	8 cut(s)	253, 1118, 1288, 1307, 1620, 1766, 1789, 2128
AluI	AGCT	8 cut(s)	253, 1118, 1288, 1307, 1620, 1766, 1789, 2128
Alw21I	GWGCWC	1 cut(s)	1791
Alw26I	GTCTC	8 cut(s)	9, 258, 452, 582, 1041, 1291, 1798, 2015
AlwI	GGATC	8 cut(s)	22, 36, 569, 624, 836, 1262, 1275, 1455
AlwNI	CAGNNNCTG	1 cut(s)	253
Ama87I	CYCGRG	1 cut(s)	1000
Aor13HI	TCCGGA	1 cut(s)	1264
AoxI	GGCC	5 cut(s)	105, 413, 1472, 1747, 1818
ApoI	RAATTY	3 cut(s)	971, 1339, 1730
AsiGI	ACCGGT	1 cut(s)	1215
Asp700I	GAANNNNTTC	4 cut(s)	732, 910, 995, 1609
AspLEI	GCGC	5 cut(s)	149, 164, 299, 354, 1167
AspS9I	GGNCC	9 cut(s)	106, 326, 357, 1157, 1218, 1473, 1818, 1978, 2156
AsuC2I	CCSGG	1 cut(s)	104
AsuHPI	GGTGA	4 cut(s)	39, 818, 1374, 1568
AsuNHI	GCTAGC	1 cut(s)	2128
AvaI	CYCGRG	1 cut(s)	1000
AvaII	GGWCC	6 cut(s)	326, 357, 1157, 1218, 1978, 2156
BamHI	GGATCC	1 cut(s)	1267
BanI	GGYRCC	1 cut(s)	296
BanII	GRGCYC	2 cut(s)	57, 1791
BbrPI	CACGTG	1 cut(s)	551
BbsI	GAAGAC	1 cut(s)	1471
Bbv12I	GWGCWC	1 cut(s)	1791
BccI	CCATC	6 cut(s)	1142, 1229, 1267, 1409, 1901, 1958
BceAI	ACGGC	5 cut(s)	20, 212, 236, 477, 1734
BcgI	CGANNNNNNTGC	2 cut(s)	392, 426
BciT130I	CCWGG	6 cut(s)	127, 675, 1161, 1746, 2073, 2136
BciVI	GTATCC	1 cut(s)	168
BclI	TGATCA	1 cut(s)	468
BcnI	CCSGG	1 cut(s)	104
BcoDI	GTCTC	8 cut(s)	9, 258, 452, 582, 1041, 1291, 1798, 2015
BfaI	CTAG	7 cut(s)	927, 1028, 1289, 1311, 1614, 1755, 2129
BfmI	CTRYAG	2 cut(s)	59, 254
BfoI	RGCGCY	2 cut(s)	300, 1168
BfuI	GTATCC	1 cut(s)	168
Bme1390I	CCNGG	7 cut(s)	104, 127, 675, 1161, 1746, 2073, 2136
Bme18I	GGWCC	6 cut(s)	326, 357, 1157, 1218, 1978, 2156
BmeRI	GACNNNNNGTC	2 cut(s)	271, 274
BmeT110I	CYCGRG	1 cut(s)	1000
BmgT120I	GGNCC	9 cut(s)	106, 326, 357, 1157, 1218, 1473, 1818, 1978, 2156
BmrFI	CCNGG	7 cut(s)	104, 127, 675, 1161, 1746, 2073, 2136
BmsI	GCATC	5 cut(s)	1379, 1513, 1909, 1910, 2170
BmtI	GCTAGC	1 cut(s)	2132
BoxI	GACNNNNGTC	1 cut(s)	2154
BpiI	GAAGAC	1 cut(s)	1471
BpmI	CTGGAG	1 cut(s)	1775
BpuEI	CTTGAG	1 cut(s)	689
BpuMI	CCSGG	1 cut(s)	104
BsaAI	YACGTR	1 cut(s)	551
BsaHI	GRCGYC	2 cut(s)	297, 314
BsaI	GGTCTC	1 cut(s)	1291
BsaJI	CCNNGG	6 cut(s)	102, 674, 1160, 2071, 2072, 2134
BsaWI	WCCGGW	4 cut(s)	49, 1215, 1264, 1870
BsaXI	ACNNNNNCTCC	4 cut(s)	125, 155, 1104, 1134
Bsc4I	CCNNNNNNNGG	6 cut(s)	126, 171, 219, 323, 851, 2141
Bse118I	RCCGGY	1 cut(s)	1215
Bse1I	ACTGG	5 cut(s)	596, 833, 1704, 1792, 1923
Bse3DI	GCAATG	1 cut(s)	293
BseAI	TCCGGA	1 cut(s)	1264
BseBI	CCWGG	6 cut(s)	127, 675, 1161, 1746, 2073, 2136
BseDI	CCNNGG	6 cut(s)	102, 674, 1160, 2071, 2072, 2134
BseGI	GGATG	3 cut(s)	1153, 1912, 2191
BseLI	CCNNNNNNNGG	6 cut(s)	126, 171, 219, 323, 851, 2141
BseMI	GCAATG	1 cut(s)	293
BseMII	CTCAG	6 cut(s)	92, 426, 978, 1872, 1878, 2010
BseNI	ACTGG	5 cut(s)	596, 833, 1704, 1792, 1923
BseRI	GAGGAG	3 cut(s)	464, 1112, 1649
BseX3I	CGGCCG	1 cut(s)	413
BseYI	CCCAGC	1 cut(s)	31
BsgI	GTGCAG	2 cut(s)	136, 2117
Bsh1236I	CGCG	5 cut(s)	147, 162, 352, 535, 717
Bsh1285I	CGRYCG	1 cut(s)	416
BshFI	GGCC	5 cut(s)	107, 415, 1474, 1749, 1820
BshNI	GGYRCC	1 cut(s)	296
BshTI	ACCGGT	1 cut(s)	1215
BsiEI	CGRYCG	1 cut(s)	416
BsiHKAI	GWGCWC	1 cut(s)	1791
BsiHKCI	CYCGRG	1 cut(s)	1000
BsiSI	CCGG	5 cut(s)	50, 104, 1216, 1265, 1871
BslFI	GGGAC	1 cut(s)	339
BslI	CCNNNNNNNGG	6 cut(s)	126, 171, 219, 323, 851, 2141
BsmAI	GTCTC	8 cut(s)	9, 258, 452, 582, 1041, 1291, 1798, 2015
BsmBI	CGTCTC	3 cut(s)	258, 452, 1798
BsmFI	GGGAC	1 cut(s)	339
BsnI	GGCC	5 cut(s)	107, 415, 1474, 1749, 1820
Bso31I	GGTCTC	1 cut(s)	1291
BsoBI	CYCGRG	1 cut(s)	1000
Bsp1286I	GDGCHC	2 cut(s)	57, 1791
Bsp13I	TCCGGA	1 cut(s)	1264
Bsp143I	GATC	9 cut(s)	27, 41, 468, 561, 616, 841, 873, 1267, 1447
BspANI	GGCC	5 cut(s)	107, 415, 1474, 1749, 1820
BspCNI	CTCAG	6 cut(s)	91, 427, 979, 1871, 1879, 2011
BspEI	TCCGGA	1 cut(s)	1264
BspFNI	CGCG	5 cut(s)	147, 162, 352, 535, 717
BspHI	TCATGA	1 cut(s)	1954
BspMAI	CTGCAG	1 cut(s)	258
BspOI	GCTAGC	1 cut(s)	2132
BspPI	GGATC	8 cut(s)	22, 36, 569, 624, 836, 1262, 1275, 1455
BspT107I	GGYRCC	1 cut(s)	296
BspTNI	GGTCTC	1 cut(s)	1291
BsrBI	CCGCTC	2 cut(s)	170, 366
BsrDI	GCAATG	1 cut(s)	293
BsrFI	RCCGGY	1 cut(s)	1215
BsrI	ACTGG	5 cut(s)	596, 833, 1704, 1792, 1923
BssAI	RCCGGY	1 cut(s)	1215
BssECI	CCNNGG	6 cut(s)	102, 674, 1160, 2071, 2072, 2134
BssMI	GATC	9 cut(s)	27, 41, 468, 561, 616, 841, 873, 1267, 1447
BssNAI	GTATAC	1 cut(s)	1567
BssNI	GRCGYC	2 cut(s)	297, 314
Bst1107I	GTATAC	1 cut(s)	1567
Bst2UI	CCWGG	6 cut(s)	127, 675, 1161, 1746, 2073, 2136
Bst4CI	ACNGT	7 cut(s)	568, 952, 1144, 1482, 1538, 2029, 2156
Bst6I	CTCTTC	3 cut(s)	1176, 1662, 1671
BstACI	GRCGYC	2 cut(s)	297, 314
BstAPI	GCANNNNNTGC	1 cut(s)	253
BstBAI	YACGTR	1 cut(s)	551
BstC8I	GCNNGC	6 cut(s)	151, 225, 301, 405, 1056, 2130
BstDEI	CTNAG	6 cut(s)	78, 435, 987, 1858, 1887, 2019
BstENI	CCTNNNNNAGG	1 cut(s)	2139
BstF5I	GGATG	3 cut(s)	1153, 1912, 2191
BstFNI	CGCG	5 cut(s)	147, 162, 352, 535, 717
BstH2I	RGCGCY	2 cut(s)	300, 1168
BstHHI	GCGC	5 cut(s)	149, 164, 299, 354, 1167
BstKTI	GATC	9 cut(s)	30, 44, 471, 564, 619, 844, 876, 1270, 1450
BstMAI	GTCTC	8 cut(s)	9, 258, 452, 582, 1041, 1291, 1798, 2015
BstMBI	GATC	9 cut(s)	27, 41, 468, 561, 616, 841, 873, 1267, 1447
BstMCI	CGRYCG	1 cut(s)	416
BstNI	CCWGG	6 cut(s)	127, 675, 1161, 1746, 2073, 2136
BstNSI	RCATGY	2 cut(s)	1054, 1355
BstPAI	GACNNNNGTC	1 cut(s)	2154
BstSCI	CCNGG	7 cut(s)	102, 125, 673, 1159, 1744, 2071, 2134
BstSFI	CTRYAG	2 cut(s)	59, 254
BstUI	CGCG	5 cut(s)	147, 162, 352, 535, 717
BstV2I	GAAGAC	1 cut(s)	1471
BstX2I	RGATCY	2 cut(s)	616, 1267
BstYI	RGATCY	2 cut(s)	616, 1267
BstZ17I	GTATAC	1 cut(s)	1567
BstZI	CGGCCG	1 cut(s)	413
BsuI	GTATCC	1 cut(s)	168
BsuRI	GGCC	5 cut(s)	107, 415, 1474, 1749, 1820
BtgZI	GCGATG	1 cut(s)	1356
BtsCI	GGATG	3 cut(s)	1153, 1912, 2191
BtsIMutI	CAGTG	6 cut(s)	564, 755, 947, 1543, 1711, 1930
Cac8I	GCNNGC	6 cut(s)	151, 225, 301, 405, 1056, 2130
CaiI	CAGNNNCTG	1 cut(s)	253
CciI	TCATGA	1 cut(s)	1954
CfoI	GCGC	5 cut(s)	149, 164, 299, 354, 1167
Cfr10I	RCCGGY	1 cut(s)	1215
Cfr13I	GGNCC	9 cut(s)	106, 326, 357, 1157, 1218, 1473, 1818, 1978, 2156
CseI	GACGC	3 cut(s)	322, 921, 1815
Csp6I	GTAC	2 cut(s)	826, 1752
CspAI	ACCGGT	1 cut(s)	1215
CviAII	CATG	7 cut(s)	370, 638, 764, 917, 1051, 1352, 1955
CviQI	GTAC	2 cut(s)	826, 1752
DdeI	CTNAG	6 cut(s)	78, 435, 987, 1858, 1887, 2019
DinI	GGCGCC	1 cut(s)	298
DpnI	GATC	9 cut(s)	29, 43, 470, 563, 618, 843, 875, 1269, 1449
DpnII	GATC	9 cut(s)	27, 41, 468, 561, 616, 841, 873, 1267, 1447
DraIII	CACNNNGTG	1 cut(s)	707
DriI	GACNNNNNGTC	2 cut(s)	271, 274
EaeI	YGGCCR	1 cut(s)	413
EagI	CGGCCG	1 cut(s)	413
Eam1104I	CTCTTC	3 cut(s)	1176, 1662, 1671
Eam1105I	GACNNNNNGTC	2 cut(s)	271, 274
EarI	CTCTTC	3 cut(s)	1176, 1662, 1671
EciI	GGCGGA	1 cut(s)	659
Ecl136II	GAGCTC	1 cut(s)	1789
EclXI	CGGCCG	1 cut(s)	413
Eco24I	GRGCYC	2 cut(s)	57, 1791
Eco31I	GGTCTC	1 cut(s)	1291
Eco32I	GATATC	1 cut(s)	712
Eco47I	GGWCC	6 cut(s)	326, 357, 1157, 1218, 1978, 2156
Eco52I	CGGCCG	1 cut(s)	413
Eco53kI	GAGCTC	1 cut(s)	1789
Eco57I	CTGAAG	4 cut(s)	779, 1323, 1644, 1683
Eco72I	CACGTG	1 cut(s)	551
Eco88I	CYCGRG	1 cut(s)	1000
EcoICRI	GAGCTC	1 cut(s)	1789
EcoNI	CCTNNNNNAGG	1 cut(s)	2139
EcoO109I	RGGNCCY	2 cut(s)	326, 1473
EcoRI	GAATTC	1 cut(s)	971
EcoRII	CCWGG	6 cut(s)	125, 673, 1159, 1744, 2071, 2134
EcoRV	GATATC	1 cut(s)	712
EcoT22I	ATGCAT	1 cut(s)	1903
EcoT38I	GRGCYC	2 cut(s)	57, 1791
EgeI	GGCGCC	1 cut(s)	298
EheI	GGCGCC	1 cut(s)	298
Esp3I	CGTCTC	3 cut(s)	258, 452, 1798
FaeI	CATG	7 cut(s)	373, 641, 767, 920, 1054, 1355, 1958
FaqI	GGGAC	1 cut(s)	339
FatI	CATG	7 cut(s)	369, 637, 763, 916, 1050, 1351, 1954
FauI	CCCGC	3 cut(s)	152, 217, 342
FbaI	TGATCA	1 cut(s)	468
FblI	GTMKAC	1 cut(s)	1566
FokI	GGATG	2 cut(s)	1160, 1919
FriOI	GRGCYC	2 cut(s)	57, 1791
FspBI	CTAG	7 cut(s)	927, 1028, 1289, 1311, 1614, 1755, 2129
GlaI	GCGC	5 cut(s)	148, 163, 298, 353, 1166
GsaI	CCCAGC	1 cut(s)	35
GsuI	CTGGAG	1 cut(s)	1775
HaeII	RGCGCY	2 cut(s)	300, 1168
HaeIII	GGCC	5 cut(s)	107, 415, 1474, 1749, 1820
HapII	CCGG	5 cut(s)	50, 104, 1216, 1265, 1871
HgaI	GACGC	3 cut(s)	322, 921, 1815
HhaI	GCGC	5 cut(s)	149, 164, 299, 354, 1167
Hin1I	GRCGYC	2 cut(s)	297, 314
Hin1II	CATG	7 cut(s)	373, 641, 767, 920, 1054, 1355, 1958
Hin6I	GCGC	5 cut(s)	147, 162, 297, 352, 1165
HinP1I	GCGC	5 cut(s)	147, 162, 297, 352, 1165
HincII	GTYRAC	1 cut(s)	232
HindII	GTYRAC	1 cut(s)	232
HindIII	AAGCTT	1 cut(s)	1305
HinfI	GANTC	5 cut(s)	272, 809, 1691, 1862, 1958
HpaII	CCGG	5 cut(s)	50, 104, 1216, 1265, 1871
HphI	GGTGA	4 cut(s)	39, 818, 1374, 1568
Hpy166II	GTNNAC	3 cut(s)	232, 1075, 1567
Hpy188III	TCNNGA	8 cut(s)	8, 694, 869, 877, 1000, 1175, 1265, 1955
Hpy8I	GTNNAC	3 cut(s)	232, 1075, 1567
Hpy99I	CGWCG	4 cut(s)	272, 280, 283, 2156
HpyAV	CCTTC	7 cut(s)	29, 508, 874, 932, 1063, 1619, 2084
HpyCH4III	ACNGT	7 cut(s)	568, 952, 1144, 1482, 1538, 2029, 2156
HpyCH4IV	ACGT	4 cut(s)	550, 796, 1591, 2107
HpyF3I	CTNAG	6 cut(s)	78, 435, 987, 1858, 1887, 2019
HpySE526I	ACGT	4 cut(s)	550, 796, 1591, 2107
Hsp92I	GRCGYC	2 cut(s)	297, 314
Hsp92II	CATG	7 cut(s)	373, 641, 767, 920, 1054, 1355, 1958
HspAI	GCGC	5 cut(s)	147, 162, 297, 352, 1165
KasI	GGCGCC	1 cut(s)	296
Kpn2I	TCCGGA	1 cut(s)	1264
Ksp22I	TGATCA	1 cut(s)	468
Kzo9I	GATC	9 cut(s)	27, 41, 468, 561, 616, 841, 873, 1267, 1447
LmnI	GCTCC	5 cut(s)	52, 129, 371, 1794, 1873
LweI	GCATC	5 cut(s)	1379, 1513, 1909, 1910, 2170
MaeI	CTAG	7 cut(s)	927, 1028, 1289, 1311, 1614, 1755, 2129
MaeII	ACGT	4 cut(s)	550, 796, 1591, 2107
MaeIII	GTNAC	5 cut(s)	310, 491, 1175, 1189, 1240
MalI	GATC	9 cut(s)	29, 43, 470, 563, 618, 843, 875, 1269, 1449
MbiI	CCGCTC	2 cut(s)	170, 366
MboI	GATC	9 cut(s)	27, 41, 468, 561, 616, 841, 873, 1267, 1447
MfeI	CAATTG	2 cut(s)	344, 1442
MflI	RGATCY	2 cut(s)	616, 1267
MhlI	GDGCHC	2 cut(s)	57, 1791
Mly113I	GGCGCC	1 cut(s)	297
MlyI	GAGTC	2 cut(s)	281, 1871
MmeI	TCCRAC	3 cut(s)	435, 781, 1845
Mph1103I	ATGCAT	1 cut(s)	1903
MroI	TCCGGA	1 cut(s)	1264
MroXI	GAANNNNTTC	4 cut(s)	732, 910, 995, 1609
MseI	TTAA	1 cut(s)	1734
MslI	CAYNNNNRTG	2 cut(s)	940, 1917
MspA1I	CMGCKG	4 cut(s)	253, 294, 319, 418
MspI	CCGG	5 cut(s)	50, 104, 1216, 1265, 1871
MspR9I	CCNGG	7 cut(s)	104, 127, 675, 1161, 1746, 2073, 2136
MunI	CAATTG	2 cut(s)	344, 1442
MvaI	CCWGG	6 cut(s)	127, 675, 1161, 1746, 2073, 2136
MvnI	CGCG	5 cut(s)	147, 162, 352, 535, 717
NarI	GGCGCC	1 cut(s)	297
NciI	CCSGG	1 cut(s)	104
NdeII	GATC	9 cut(s)	27, 41, 468, 561, 616, 841, 873, 1267, 1447
NheI	GCTAGC	1 cut(s)	2128
NlaIII	CATG	7 cut(s)	373, 641, 767, 920, 1054, 1355, 1958
NmeAIII	GCCGAG	1 cut(s)	238
NmuCI	GTSAC	3 cut(s)	310, 491, 1175
NsiI	ATGCAT	1 cut(s)	1903
NspI	RCATGY	2 cut(s)	1054, 1355
PaeR7I	CTCGAG	1 cut(s)	1000
PagI	TCATGA	1 cut(s)	1954
PasI	CCCWGGG	1 cut(s)	2072
PciI	ACATGT	1 cut(s)	1351
PcsI	WCGNNNNNNNCGW	1 cut(s)	793
PdmI	GAANNNNTTC	4 cut(s)	732, 910, 995, 1609
PfeI	GAWTC	3 cut(s)	809, 1691, 1958
PflMI	CCANNNNNTGG	1 cut(s)	851
PfoI	TCCNGGA	1 cut(s)	125
PinAI	ACCGGT	1 cut(s)	1215
PleI	GAGTC	2 cut(s)	280, 1870
PluTI	GGCGCC	1 cut(s)	300
PmaCI	CACGTG	1 cut(s)	551
PmlI	CACGTG	1 cut(s)	551
PpsI	GAGTC	2 cut(s)	280, 1870
Ppu21I	YACGTR	1 cut(s)	551
PpuMI	RGGWCCY	1 cut(s)	326
PscI	ACATGT	1 cut(s)	1351
PshAI	GACNNNNGTC	1 cut(s)	2154
Psp124BI	GAGCTC	1 cut(s)	1791
Psp5II	RGGWCCY	1 cut(s)	326
Psp6I	CCWGG	6 cut(s)	125, 673, 1159, 1744, 2071, 2134
PspCI	CACGTG	1 cut(s)	551
PspFI	CCCAGC	1 cut(s)	31
PspGI	CCWGG	6 cut(s)	125, 673, 1159, 1744, 2071, 2134
PspPI	GGNCC	9 cut(s)	106, 326, 357, 1157, 1218, 1473, 1818, 1978, 2156
PspPPI	RGGWCCY	1 cut(s)	326
PstI	CTGCAG	1 cut(s)	258
PstNI	CAGNNNCTG	1 cut(s)	253
PsuI	RGATCY	2 cut(s)	616, 1267
PvuII	CAGCTG	1 cut(s)	253
RsaI	GTAC	2 cut(s)	827, 1753
RsaNI	GTAC	2 cut(s)	826, 1752
RseI	CAYNNNNRTG	2 cut(s)	940, 1917
SacI	GAGCTC	1 cut(s)	1791
SaqAI	TTAA	1 cut(s)	1734
Sau3AI	GATC	9 cut(s)	27, 41, 468, 561, 616, 841, 873, 1267, 1447
Sau96I	GGNCC	9 cut(s)	106, 326, 357, 1157, 1218, 1473, 1818, 1978, 2156
SchI	GAGTC	2 cut(s)	281, 1871
ScrFI	CCNGG	7 cut(s)	104, 127, 675, 1161, 1746, 2073, 2136
SduI	GDGCHC	2 cut(s)	57, 1791
SfaNI	GCATC	5 cut(s)	1379, 1513, 1909, 1910, 2170
SfcI	CTRYAG	2 cut(s)	59, 254
SfoI	GGCGCC	1 cut(s)	298
Sfr274I	CTCGAG	1 cut(s)	1000
SinI	GGWCC	6 cut(s)	326, 357, 1157, 1218, 1978, 2156
SlaI	CTCGAG	1 cut(s)	1000
SmiMI	CAYNNNNRTG	2 cut(s)	940, 1917
SmlI	CTYRAG	2 cut(s)	668, 1000
SmoI	CTYRAG	2 cut(s)	668, 1000
SspDI	GGCGCC	1 cut(s)	296
SspI	AATATT	2 cut(s)	427, 1972
SspMI	CTAG	7 cut(s)	927, 1028, 1289, 1311, 1614, 1755, 2129
SstI	GAGCTC	1 cut(s)	1791
StyD4I	CCNGG	7 cut(s)	102, 125, 673, 1159, 1744, 2071, 2134
TaaI	ACNGT	7 cut(s)	568, 952, 1144, 1482, 1538, 2029, 2156
TaiI	ACGT	4 cut(s)	553, 799, 1594, 2110
TaqI	TCGA	6 cut(s)	966, 1001, 1450, 1843, 2088, 2115
TauI	GCSGC	7 cut(s)	167, 170, 286, 297, 319, 352, 418
TfiI	GAWTC	3 cut(s)	809, 1691, 1958
Tru1I	TTAA	1 cut(s)	1734
Tru9I	TTAA	1 cut(s)	1734
TscAI	CASTG	6 cut(s)	571, 762, 947, 1543, 1711, 1930
TseFI	GTSAC	3 cut(s)	310, 491, 1175
Tsp45I	GTSAC	3 cut(s)	310, 491, 1175
TspGWI	ACGGA	1 cut(s)	1031
TspRI	CASTG	6 cut(s)	571, 762, 947, 1543, 1711, 1930
Van91I	CCANNNNNTGG	1 cut(s)	851
VpaK11BI	GGWCC	6 cut(s)	326, 357, 1157, 1218, 1978, 2156
XagI	CCTNNNNNAGG	1 cut(s)	2139
XapI	RAATTY	3 cut(s)	971, 1339, 1730
XceI	RCATGY	2 cut(s)	1054, 1355
XcmI	CCANNNNNNNNNTGG	1 cut(s)	376
XhoI	CTCGAG	1 cut(s)	1000
XmiI	GTMKAC	1 cut(s)	1566
XmnI	GAANNNNTTC	4 cut(s)	732, 910, 995, 1609
XspI	CTAG	7 cut(s)	927, 1028, 1289, 1311, 1614, 1755, 2129
Zsp2I	ATGCAT	1 cut(s)	1903

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.