Rh7AG031900

WSTF, HB1, Itc1p, MBD9 motif 1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0007850
Physical Location & Seq
Reverse (-)
2200228 .. 2206750
6523 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG031900.1

Sequence Viewer

Length: 2226 bp
ATGTCTCTCGAGTCTTCTCCTCCGATCCCGTCCGACCGATCCTCGCCGGAACCCCAGCAACCACCACAACCCCCTCAAAACGACGACGTCGCGGCCACGACGACAACGACAACAGCCCCGGCCCCCACGCCGCCGCTGTCCCGCAGCAACCGCCCCTCCCGCGCTTGCACCCTACGCGCCGCGGCTAGGTTGCAGCAGCAGCAGCAGTACCAGCACGCCGAGCCGAGGAAGCCGAAGGCGGCGAGGAAGGAGCAGCCGCCGCAGCAGGAGAACGACGAGTCGTCGTCGCCGCAGCAATGCGGGAGCGCCAGCAAGATCGTGACGTCGCTGGTGGACCCGCCCTCGCAGTCGCAATTGCCGCGGTGGACGCTCCGGTCCATGTGGGAATTGGCCTCCGTGCTCAATTTTCTACATGCTTTTCGGCCGCTGTTGAATATACACGCCGAGTTCTCGGCTGAGGAATTGGAGACTGCTTTGATCACACCCAATGATAGCTTGAGTGACGTTCACATTCCCTTGTTGAAGGCGATTCCCCCTGTGACAAGAATGGCACTTACACGTGATACTTGGATAACTGTTTTATGCAGAAAGTTGAGAGACTGGTGGCATTGGGTTGCAGATGGAGATCTACCTATTGTTGCTTCACATGGGGCGGAGATTGAAGTATATAAAACACTTGATCCCGGTGTCCGTGTGGTCATTTTGAAAGCACTTTGTGATATTCGTGTTGAGCAAGAGGATATCCGGAACTATATTGACAATTCACTGAAACATGGTGTCCAGCTTTCCACATTTCGTAAAGAACGCCTTGGGGGTGATTCACATGGAATCTCTTACTGGTATGAAGATGATCCAATTATTGGTTATCGGTTATATCGGGAGATAAGGAAGACTGAGGTGAAGAAAGTAAGAGCAAAGGGTTCCCATGTCCTTCCTACTACAACATACCAGTGGGAAACAGTTGCAACCAATTTTGATGAATTTCAAGATGTTGGAGAAAAACTTTTCTCCAGTATCAATAGAACAGAGGCTGCTGTAGGAAAAAAGTTGAAAGGTGACATGCTTTTAGAGATTGAGAAGGTTCACAAGAGGAAAGAGAAGTTGCTGAAGAAGCAACACAGACAAGCTCTGCTCCTTGATAATTATGTGTCTGTGGATGGGCTTGGTCCAGGGCGCTCTCTTCGTGACAGAAAACCTGTCACATACACTTTTGATGATTATGACCGGTCAATCAATGAGGCCATCAAGATAACCAAAACGAAACAGCCATCCCCTGAGCCTTTACAGAAACGAGATGTTGTTATGAAACATGAAGCTTCTAGCAATGGTAAATGGAGTGGTACTTCAAATTCCCATGAGCATGTGGGATTTAGCCCTCTGTCTCCTAAATCACCTGATTACGAAGACGAAGAAGATGATGTTGAGGAAGATGACAAATCTGAACAAATGGATAGAAGCAATCGGCGAAGACAGAGGCCCCAACGGTATTCTGCAAAAGAATTTGTTGAAGCAGTTTCAGATAATGATGCAGACTTTGACAGTGATGATGAAATAGTTGGTGAAGCTATTTATGATGAAGAATACTTAAAGAAACGTAAGGAGAGGAGAAAGTTTTCTAGTAGCTCTGAAGGAGATGAGGAGTATCGTTGGGAGGAAGAAAATCCTGAAGAGGAGGAAGAGGAGGAGGAAGAAGATTCTGCTAGTGCCAGTGAGGAAAGTGACGAACCTCGAAAGTTTAAGAAACTGCGCGGTCGTCCTAAGGAATTGCCAGGACGTACTAGGAGGGAAGCTAAATTGAGGTCGGTTGATGAGCTCCAGTCAGGTCTAAGACGCAGTAAGAGGGCCACCAGAAATCGTATTGATTATCGGCAGTATGAGTTTTCAGATTCAGATACAGAGCCTATGAAACCTGAGAAGTCAAATGCATCAGATCGACACTCTGATGCAACTGAGAATGGTGACTATTCAATGGAAAGTCAAGATTCAGATGTTAATGATGGTCACCATGAAATGGAAGTTGGTCAGGCTGATCAGGCTGTTGAAAATTACCCAGAAACAGTAGAAAAAGAGGAAAACCAGCCACCTGAAAAATCAAATAGCCCAGGGGAAAATGAAGTTGGAGGTGTACAGAAAAGACGTTTCCTTGACCTAAACGAACTTGCCCCTGGTTCAGGTTTTGACGATGGTCCAAATACGATAATGAAAGATGATGCGGATGATTTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DDT WHIM1

Protein Analysis

741

Amino Acids

84.57

Weight (kDa)

5.1

Isoelectric Point (pI)

63.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DDT PF02791 132 - 177 8.6e-06 DDT domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 373
AatII GACGTC 2 cut(s) 90, 326
AccB7I CCANNNNNTGG 2 cut(s) 860, 2011
AccII CGCG 6 cut(s) 92, 162, 177, 182, 361, 1749
AccIII TCCGGA 1 cut(s) 744
AclWI GGATC 4 cut(s) 19, 33, 674, 845
AcoI YGGCCR 2 cut(s) 93, 422
AcsI RAATTY 3 cut(s) 980, 1348, 1499
AcuI CTGAAG 3 cut(s) 1127, 1647, 1686
AcvI CACGTG 1 cut(s) 560
AcyI GRCGYC 2 cut(s) 87, 323
AdeI CACNNNGTG 1 cut(s) 716
AfaI GTAC 4 cut(s) 209, 1342, 1777, 2127
AfiI CCNNNNNNNGG 5 cut(s) 186, 225, 860, 2011, 2171
AflIII ACRYGT 1 cut(s) 557
AgeI ACCGGT 1 cut(s) 1224
AhdI GACNNNNNGTC 1 cut(s) 280
AjnI CCWGG 4 cut(s) 1168, 1768, 2101, 2164
AjuI GAANNNNNNNTTGG 4 cut(s) 2001, 2033, 2100, 2132
AluBI AGCT 8 cut(s) 495, 784, 1127, 1316, 1565, 1623, 1790, 1813
AluI AGCT 8 cut(s) 495, 784, 1127, 1316, 1565, 1623, 1790, 1813
Alw21I GWGCWC 2 cut(s) 402, 1815
Alw26I GTCTC 4 cut(s) 9, 461, 591, 1386
AlwI GGATC 4 cut(s) 19, 33, 674, 845
AlwNI CAGNNNCTG 1 cut(s) 1031
Ama87I CYCGRG 1 cut(s) 8
Aor13HI TCCGGA 1 cut(s) 744
AoxI GGCC 7 cut(s) 93, 120, 390, 422, 1239, 1475, 1842
ApeKI GCWGC 9 cut(s) 144, 193, 196, 199, 202, 253, 262, 292, 1031
ApoI RAATTY 3 cut(s) 980, 1348, 1499
AsiGI ACCGGT 1 cut(s) 1224
Asp700I GAANNNNTTC 1 cut(s) 1612
AspLEI GCGC 5 cut(s) 164, 179, 308, 1176, 1749
AspS9I GGNCC 7 cut(s) 121, 334, 375, 1166, 1476, 1842, 2186
AsuC2I CCSGG 2 cut(s) 119, 684
AsuHPI GGTGA 7 cut(s) 827, 910, 1067, 1383, 1571, 1970, 1994
AvaI CYCGRG 1 cut(s) 8
AvaII GGWCC 4 cut(s) 334, 375, 1166, 2186
AxyI CCTNAGG 1 cut(s) 1758
BanII GRGCYC 1 cut(s) 1815
BbrPI CACGTG 1 cut(s) 560
BbsI GAAGAC 4 cut(s) 6, 896, 1410, 1474
Bbv12I GWGCWC 2 cut(s) 402, 1815
BbvCI CCTCAGC 1 cut(s) 456
BbvI GCAGC 9 cut(s) 156, 205, 208, 211, 214, 265, 274, 304, 1018
BccI CCATC 6 cut(s) 614, 1151, 1250, 1276, 1991, 2177
BciT130I CCWGG 4 cut(s) 1170, 1770, 2103, 2166
BclI TGATCA 2 cut(s) 477, 2029
BcnI CCSGG 2 cut(s) 119, 684
BcoDI GTCTC 4 cut(s) 9, 461, 591, 1386
BfaI CTAG 5 cut(s) 186, 1320, 1617, 1701, 1779
BfmI CTRYAG 1 cut(s) 1035
BfoI RGCGCY 2 cut(s) 309, 1177
BglII AGATCT 1 cut(s) 625
Bme1390I CCNGG 6 cut(s) 119, 684, 1170, 1770, 2103, 2166
Bme18I GGWCC 4 cut(s) 334, 375, 1166, 2186
BmeRI GACNNNNNGTC 1 cut(s) 280
BmeT110I CYCGRG 1 cut(s) 8
BmgT120I GGNCC 7 cut(s) 121, 334, 375, 1166, 1476, 1842, 2186
BmiI GGNNCC 5 cut(s) 51, 123, 336, 922, 1478
BmrFI CCNGG 6 cut(s) 119, 684, 1170, 1770, 2103, 2166
BmsI GCATC 4 cut(s) 1516, 1933, 1934, 2200
BoxI GACNNNNGTC 1 cut(s) 2184
BpiI GAAGAC 4 cut(s) 6, 896, 1410, 1474
BpmI CTGGAG 2 cut(s) 994, 1799
Bpu10I CCTNAGC 2 cut(s) 456, 1275
BpuEI CTTGAG 1 cut(s) 517
BpuMI CCSGG 2 cut(s) 119, 684
BsaAI YACGTR 1 cut(s) 560
BsaBI GATNNNNATC 1 cut(s) 624
BsaHI GRCGYC 2 cut(s) 87, 323
BsaJI CCNNGG 9 cut(s) 117, 180, 224, 359, 808, 1169, 2101, 2102, 2164
BsaWI WCCGGW 3 cut(s) 372, 744, 1224
BsaXI ACNNNNNCTCC 2 cut(s) 140, 170
Bsc4I CCNNNNNNNGG 5 cut(s) 186, 225, 860, 2011, 2171
Bse118I RCCGGY 1 cut(s) 1224
Bse1I ACTGG 6 cut(s) 605, 842, 949, 1011, 1707, 1816
Bse21I CCTNAGG 1 cut(s) 1758
Bse3DI GCAATG 2 cut(s) 302, 1330
Bse8I GATNNNNATC 1 cut(s) 624
BseAI TCCGGA 1 cut(s) 744
BseBI CCWGG 4 cut(s) 1170, 1770, 2103, 2166
BseDI CCNNGG 9 cut(s) 117, 180, 224, 359, 808, 1169, 2101, 2102, 2164
BseGI GGATG 3 cut(s) 1162, 1268, 2221
BseJI GATNNNNATC 1 cut(s) 624
BseLI CCNNNNNNNGG 5 cut(s) 186, 225, 860, 2011, 2171
BseMI GCAATG 2 cut(s) 302, 1330
BseMII CTCAG 5 cut(s) 447, 885, 1266, 1902, 1941
BseNI ACTGG 6 cut(s) 605, 842, 949, 1011, 1707, 1816
BseRI GAGGAG 6 cut(s) 9, 1618, 1652, 1685, 1694, 1697
BseX3I CGGCCG 1 cut(s) 422
BseXI GCAGC 9 cut(s) 156, 205, 208, 211, 214, 265, 274, 304, 1018
BseYI CCCAGC 1 cut(s) 54
Bsh1236I CGCG 6 cut(s) 92, 162, 177, 182, 361, 1749
Bsh1285I CGRYCG 3 cut(s) 37, 425, 1753
BshFI GGCC 7 cut(s) 95, 122, 392, 424, 1241, 1477, 1844
BshTI ACCGGT 1 cut(s) 1224
BsiEI CGRYCG 3 cut(s) 37, 425, 1753
BsiHKAI GWGCWC 2 cut(s) 402, 1815
BsiHKCI CYCGRG 1 cut(s) 8
BsiSI CCGG 6 cut(s) 47, 119, 373, 684, 745, 1225
BslFI GGGAC 1 cut(s) 124
BslI CCNNNNNNNGG 5 cut(s) 186, 225, 860, 2011, 2171
BsmAI GTCTC 4 cut(s) 9, 461, 591, 1386
BsmFI GGGAC 1 cut(s) 124
BsnI GGCC 7 cut(s) 95, 122, 392, 424, 1241, 1477, 1844
BsoBI CYCGRG 1 cut(s) 8
Bsp1286I GDGCHC 2 cut(s) 402, 1815
Bsp13I TCCGGA 1 cut(s) 744
Bsp1407I TGTACA 1 cut(s) 2125
Bsp143I GATC 9 cut(s) 24, 38, 315, 477, 625, 679, 850, 1930, 2029
BspANI GGCC 7 cut(s) 95, 122, 392, 424, 1241, 1477, 1844
BspCNI CTCAG 5 cut(s) 448, 886, 1267, 1903, 1942
BspEI TCCGGA 1 cut(s) 744
BspFNI CGCG 6 cut(s) 92, 162, 177, 182, 361, 1749
BspLI GGNNCC 5 cut(s) 51, 123, 336, 922, 1478
BspPI GGATC 4 cut(s) 19, 33, 674, 845
BsrDI GCAATG 2 cut(s) 302, 1330
BsrFI RCCGGY 1 cut(s) 1224
BsrGI TGTACA 1 cut(s) 2125
BsrI ACTGG 6 cut(s) 605, 842, 949, 1011, 1707, 1816
BssAI RCCGGY 1 cut(s) 1224
BssECI CCNNGG 9 cut(s) 117, 180, 224, 359, 808, 1169, 2101, 2102, 2164
BssMI GATC 9 cut(s) 24, 38, 315, 477, 625, 679, 850, 1930, 2029
BssNI GRCGYC 2 cut(s) 87, 323
BssT1I CCWWGG 1 cut(s) 808
Bst2UI CCWGG 4 cut(s) 1170, 1770, 2103, 2166
Bst4CI ACNGT 5 cut(s) 577, 961, 1485, 1541, 2059
Bst6I CTCTTC 3 cut(s) 1185, 1662, 1671
BstACI GRCGYC 2 cut(s) 87, 323
BstAUI TGTACA 1 cut(s) 2125
BstBAI YACGTR 1 cut(s) 560
BstC8I GCNNGC 3 cut(s) 166, 216, 310
BstDEI CTNAG 7 cut(s) 456, 894, 1275, 1758, 1826, 1911, 1950
BstDSI CCRYGG 2 cut(s) 180, 359
BstEII GGTNACC 1 cut(s) 2000
BstENI CCTNNNNNAGG 1 cut(s) 2169
BstF5I GGATG 3 cut(s) 1162, 1268, 2221
BstFNI CGCG 6 cut(s) 92, 162, 177, 182, 361, 1749
BstH2I RGCGCY 2 cut(s) 309, 1177
BstHHI GCGC 5 cut(s) 164, 179, 308, 1176, 1749
BstKTI GATC 9 cut(s) 27, 41, 318, 480, 628, 682, 853, 1933, 2032
BstMAI GTCTC 4 cut(s) 9, 461, 591, 1386
BstMBI GATC 9 cut(s) 24, 38, 315, 477, 625, 679, 850, 1930, 2029
BstMCI CGRYCG 3 cut(s) 37, 425, 1753
BstNI CCWGG 4 cut(s) 1170, 1770, 2103, 2166
BstNSI RCATGY 3 cut(s) 416, 1063, 1364
BstPAI GACNNNNGTC 1 cut(s) 2184
BstPI GGTNACC 1 cut(s) 2000
BstSCI CCNGG 6 cut(s) 117, 682, 1168, 1768, 2101, 2164
BstSFI CTRYAG 1 cut(s) 1035
BstUI CGCG 6 cut(s) 92, 162, 177, 182, 361, 1749
BstV1I GCAGC 9 cut(s) 156, 205, 208, 211, 214, 265, 274, 304, 1018
BstV2I GAAGAC 4 cut(s) 6, 896, 1410, 1474
BstX2I RGATCY 1 cut(s) 625
BstYI RGATCY 1 cut(s) 625
BstZI CGGCCG 1 cut(s) 422
Bsu36I CCTNAGG 1 cut(s) 1758
BsuRI GGCC 7 cut(s) 95, 122, 392, 424, 1241, 1477, 1844
BtgI CCRYGG 2 cut(s) 180, 359
BtsCI GGATG 3 cut(s) 1162, 1268, 2221
BtsIMutI CAGTG 4 cut(s) 764, 956, 1546, 1714
Cac8I GCNNGC 3 cut(s) 166, 216, 310
CaiI CAGNNNCTG 1 cut(s) 1031
CfoI GCGC 5 cut(s) 164, 179, 308, 1176, 1749
Cfr10I RCCGGY 1 cut(s) 1224
Cfr13I GGNCC 7 cut(s) 121, 334, 375, 1166, 1476, 1842, 2186
Cfr42I CCGCGG 2 cut(s) 183, 362
CseI GACGC 2 cut(s) 376, 1839
Csp6I GTAC 4 cut(s) 208, 1341, 1776, 2126
CspAI ACCGGT 1 cut(s) 1224
CviQI GTAC 4 cut(s) 208, 1341, 1776, 2126
DdeI CTNAG 7 cut(s) 456, 894, 1275, 1758, 1826, 1911, 1950
DpnI GATC 9 cut(s) 26, 40, 317, 479, 627, 681, 852, 1932, 2031
DpnII GATC 9 cut(s) 24, 38, 315, 477, 625, 679, 850, 1930, 2029
DraIII CACNNNGTG 1 cut(s) 716
DrdI GACNNNNNNGTC 1 cut(s) 373
DriI GACNNNNNGTC 1 cut(s) 280
DseDI GACNNNNNNGTC 1 cut(s) 373
EaeI YGGCCR 2 cut(s) 93, 422
EagI CGGCCG 1 cut(s) 422
Eam1104I CTCTTC 3 cut(s) 1185, 1662, 1671
Eam1105I GACNNNNNGTC 1 cut(s) 280
EarI CTCTTC 3 cut(s) 1185, 1662, 1671
EciI GGCGGA 1 cut(s) 668
Ecl136II GAGCTC 1 cut(s) 1813
EclXI CGGCCG 1 cut(s) 422
Eco130I CCWWGG 1 cut(s) 808
Eco24I GRGCYC 1 cut(s) 1815
Eco32I GATATC 1 cut(s) 742
Eco47I GGWCC 4 cut(s) 334, 375, 1166, 2186
Eco52I CGGCCG 1 cut(s) 422
Eco53kI GAGCTC 1 cut(s) 1813
Eco57I CTGAAG 3 cut(s) 1127, 1647, 1686
Eco72I CACGTG 1 cut(s) 560
Eco81I CCTNAGG 1 cut(s) 1758
Eco88I CYCGRG 1 cut(s) 8
Eco91I GGTNACC 1 cut(s) 2000
EcoICRI GAGCTC 1 cut(s) 1813
EcoNI CCTNNNNNAGG 1 cut(s) 2169
EcoO109I RGGNCCY 1 cut(s) 1476
EcoO65I GGTNACC 1 cut(s) 2000
EcoRII CCWGG 4 cut(s) 1168, 1768, 2101, 2164
EcoRV GATATC 1 cut(s) 742
EcoT14I CCWWGG 1 cut(s) 808
EcoT22I ATGCAT 1 cut(s) 1927
EcoT38I GRGCYC 1 cut(s) 1815
ErhI CCWWGG 1 cut(s) 808
FalI AAGNNNNNCTT 2 cut(s) 792, 824
FaqI GGGAC 1 cut(s) 124
FauI CCCGC 4 cut(s) 149, 167, 293, 345
FbaI TGATCA 2 cut(s) 477, 2029
FokI GGATG 2 cut(s) 1169, 1255
FriOI GRGCYC 1 cut(s) 1815
FspBI CTAG 5 cut(s) 186, 1320, 1617, 1701, 1779
GlaI GCGC 5 cut(s) 163, 178, 307, 1175, 1748
GsaI CCCAGC 1 cut(s) 58
GsuI CTGGAG 2 cut(s) 994, 1799
HaeII RGCGCY 2 cut(s) 309, 1177
HaeIII GGCC 7 cut(s) 95, 122, 392, 424, 1241, 1477, 1844
HapII CCGG 6 cut(s) 47, 119, 373, 684, 745, 1225
HgaI GACGC 2 cut(s) 376, 1839
HhaI GCGC 5 cut(s) 164, 179, 308, 1176, 1749
Hin1I GRCGYC 2 cut(s) 87, 323
Hin6I GCGC 5 cut(s) 162, 177, 306, 1174, 1747
HinP1I GCGC 5 cut(s) 162, 177, 306, 1174, 1747
HindIII AAGCTT 1 cut(s) 1314
HinfI GANTC 8 cut(s) 11, 278, 529, 818, 828, 1694, 1886, 1982
HpaII CCGG 6 cut(s) 47, 119, 373, 684, 745, 1225
HphI GGTGA 7 cut(s) 827, 910, 1067, 1383, 1571, 1970, 1994
Hpy166II GTNNAC 5 cut(s) 334, 366, 508, 1084, 2126
Hpy188III TCNNGA 9 cut(s) 8, 319, 745, 878, 986, 1184, 1246, 1664, 1979
Hpy8I GTNNAC 5 cut(s) 334, 366, 508, 1084, 2126
Hpy99I CGWCG 8 cut(s) 86, 89, 92, 103, 278, 286, 289, 328
HpyAV CCTTC 6 cut(s) 229, 241, 517, 941, 1072, 1622
HpyCH4III ACNGT 5 cut(s) 577, 961, 1485, 1541, 2059
HpyCH4IV ACGT 7 cut(s) 87, 323, 504, 559, 1594, 1774, 2137
HpyCH4V TGCA 9 cut(s) 168, 193, 585, 617, 965, 1493, 1529, 1925, 1946
HpyF3I CTNAG 7 cut(s) 456, 894, 1275, 1758, 1826, 1911, 1950
HpySE526I ACGT 7 cut(s) 87, 323, 504, 559, 1594, 1774, 2137
Hsp92I GRCGYC 2 cut(s) 87, 323
HspAI GCGC 5 cut(s) 162, 177, 306, 1174, 1747
Kpn2I TCCGGA 1 cut(s) 744
Ksp22I TGATCA 2 cut(s) 477, 2029
KspI CCGCGG 2 cut(s) 183, 362
Kzo9I GATC 9 cut(s) 24, 38, 315, 477, 625, 679, 850, 1930, 2029
LmnI GCTCC 5 cut(s) 250, 303, 375, 1137, 1818
Lsp1109I GCAGC 9 cut(s) 156, 205, 208, 211, 214, 265, 274, 304, 1018
LweI GCATC 4 cut(s) 1516, 1933, 1934, 2200
MaeI CTAG 5 cut(s) 186, 1320, 1617, 1701, 1779
MaeII ACGT 7 cut(s) 87, 323, 504, 559, 1594, 1774, 2137
MaeIII GTNAC 9 cut(s) 319, 500, 538, 1055, 1184, 1198, 1718, 1958, 2000
MalI GATC 9 cut(s) 26, 40, 317, 479, 627, 681, 852, 1932, 2031
MboI GATC 9 cut(s) 24, 38, 315, 477, 625, 679, 850, 1930, 2029
MfeI CAATTG 1 cut(s) 353
MflI RGATCY 1 cut(s) 625
MhlI GDGCHC 2 cut(s) 402, 1815
MlyI GAGTC 2 cut(s) 20, 287
MmeI TCCRAC 3 cut(s) 57, 973, 2098
Mph1103I ATGCAT 1 cut(s) 1927
MroI TCCGGA 1 cut(s) 744
MroXI GAANNNNTTC 1 cut(s) 1612
MseI TTAA 3 cut(s) 1586, 1737, 1992
MslI CAYNNNNRTG 3 cut(s) 949, 1359, 1941
MspA1I CMGCKG 4 cut(s) 136, 182, 361, 427
MspI CCGG 6 cut(s) 47, 119, 373, 684, 745, 1225
MspR9I CCNGG 6 cut(s) 119, 684, 1170, 1770, 2103, 2166
MunI CAATTG 1 cut(s) 353
MvaI CCWGG 4 cut(s) 1170, 1770, 2103, 2166
MvnI CGCG 6 cut(s) 92, 162, 177, 182, 361, 1749
NciI CCSGG 2 cut(s) 119, 684
NdeII GATC 9 cut(s) 24, 38, 315, 477, 625, 679, 850, 1930, 2029
NlaIV GGNNCC 5 cut(s) 51, 123, 336, 922, 1478
NmeAIII GCCGAG 4 cut(s) 244, 249, 431, 469
NmuCI GTSAC 9 cut(s) 319, 500, 538, 1055, 1184, 1198, 1718, 1958, 2000
NsiI ATGCAT 1 cut(s) 1927
NspI RCATGY 3 cut(s) 416, 1063, 1364
PaeR7I CTCGAG 1 cut(s) 8
PasI CCCWGGG 1 cut(s) 2102
PcsI WCGNNNNNNNCGW 1 cut(s) 104
PdmI GAANNNNTTC 1 cut(s) 1612
PfeI GAWTC 6 cut(s) 529, 818, 828, 1694, 1886, 1982
PflFI GACNNNGTC 1 cut(s) 86
PflMI CCANNNNNTGG 2 cut(s) 860, 2011
PinAI ACCGGT 1 cut(s) 1224
PleI GAGTC 2 cut(s) 19, 286
PmaCI CACGTG 1 cut(s) 560
PmlI CACGTG 1 cut(s) 560
PpsI GAGTC 2 cut(s) 19, 286
Ppu21I YACGTR 1 cut(s) 560
PshAI GACNNNNGTC 1 cut(s) 2184
Psp124BI GAGCTC 1 cut(s) 1815
Psp6I CCWGG 4 cut(s) 1168, 1768, 2101, 2164
PspCI CACGTG 1 cut(s) 560
PspEI GGTNACC 1 cut(s) 2000
PspFI CCCAGC 1 cut(s) 54
PspGI CCWGG 4 cut(s) 1168, 1768, 2101, 2164
PspN4I GGNNCC 5 cut(s) 51, 123, 336, 922, 1478
PspPI GGNCC 7 cut(s) 121, 334, 375, 1166, 1476, 1842, 2186
PstNI CAGNNNCTG 1 cut(s) 1031
PsuI RGATCY 1 cut(s) 625
PsyI GACNNNGTC 1 cut(s) 86
RsaI GTAC 4 cut(s) 209, 1342, 1777, 2127
RsaNI GTAC 4 cut(s) 208, 1341, 1776, 2126
RseI CAYNNNNRTG 3 cut(s) 949, 1359, 1941
SacI GAGCTC 1 cut(s) 1815
SacII CCGCGG 2 cut(s) 183, 362
SaqAI TTAA 3 cut(s) 1586, 1737, 1992
Sau3AI GATC 9 cut(s) 24, 38, 315, 477, 625, 679, 850, 1930, 2029
Sau96I GGNCC 7 cut(s) 121, 334, 375, 1166, 1476, 1842, 2186
SchI GAGTC 2 cut(s) 20, 287
ScrFI CCNGG 6 cut(s) 119, 684, 1170, 1770, 2103, 2166
SduI GDGCHC 2 cut(s) 402, 1815
SfaNI GCATC 4 cut(s) 1516, 1933, 1934, 2200
SfcI CTRYAG 1 cut(s) 1035
Sfr274I CTCGAG 1 cut(s) 8
Sfr303I CCGCGG 2 cut(s) 183, 362
SgrBI CCGCGG 2 cut(s) 183, 362
SinI GGWCC 4 cut(s) 334, 375, 1166, 2186
SlaI CTCGAG 1 cut(s) 8
SmiMI CAYNNNNRTG 3 cut(s) 949, 1359, 1941
SmlI CTYRAG 2 cut(s) 8, 496
SmoI CTYRAG 2 cut(s) 8, 496
SspMI CTAG 5 cut(s) 186, 1320, 1617, 1701, 1779
SstI GAGCTC 1 cut(s) 1815
StyD4I CCNGG 6 cut(s) 117, 682, 1168, 1768, 2101, 2164
StyI CCWWGG 1 cut(s) 808
TaaI ACNGT 5 cut(s) 577, 961, 1485, 1541, 2059
TaiI ACGT 7 cut(s) 90, 326, 507, 562, 1597, 1777, 2140
TaqI TCGA 3 cut(s) 9, 1729, 1933
TaqII GACCGA 1 cut(s) 51
TatI WGTACW 1 cut(s) 2125
TfiI GAWTC 6 cut(s) 529, 818, 828, 1694, 1886, 1982
Tru1I TTAA 3 cut(s) 1586, 1737, 1992
Tru9I TTAA 3 cut(s) 1586, 1737, 1992
TscAI CASTG 4 cut(s) 771, 956, 1546, 1714
TseFI GTSAC 9 cut(s) 319, 500, 538, 1055, 1184, 1198, 1718, 1958, 2000
TseI GCWGC 9 cut(s) 144, 193, 196, 199, 202, 253, 262, 292, 1031
Tsp45I GTSAC 9 cut(s) 319, 500, 538, 1055, 1184, 1198, 1718, 1958, 2000
TspGWI ACGGA 2 cut(s) 385, 680
TspRI CASTG 4 cut(s) 771, 956, 1546, 1714
Tth111I GACNNNGTC 1 cut(s) 86
Van91I CCANNNNNTGG 2 cut(s) 860, 2011
VpaK11BI GGWCC 4 cut(s) 334, 375, 1166, 2186
XagI CCTNNNNNAGG 1 cut(s) 2169
XapI RAATTY 3 cut(s) 980, 1348, 1499
XceI RCATGY 3 cut(s) 416, 1063, 1364
XcmI CCANNNNNNNNNTGG 1 cut(s) 385
XhoI CTCGAG 1 cut(s) 8
XmnI GAANNNNTTC 1 cut(s) 1612
XspI CTAG 5 cut(s) 186, 1320, 1617, 1701, 1779
ZraI GACGTC 2 cut(s) 88, 324
Zsp2I ATGCAT 1 cut(s) 1927
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.