Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0003378

Physical Location & Seq

Genomic Coordinates Reverse (-)

11303400 .. 11308396

Gene Structure 4997 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g19470.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1995 bp

ATGGAGGGTGTGGATCATTTGGCTCACGAAAGGAGCAAGGCCCAGTTCGATGTTGACCACATGAAGGTCGTCTGGGCCGGCTCCCGCCACACCCTGGAGGTCTCCGATCGGATTGCTCGCCTCGTCGCCTCCGATCCGGTGTTTAAAAAGGATGATAGGACTAGGCTAAGTAGGAAGGACTTGTTTAAAGACACTCTGAGAAAAGCAGCTCATGTCTGGAAGCGGATCACCGAGCTTAAACTTACTGAAGAAGAGGCATCCAAGTTGAGGTTTTATGTCGATCAACCTGCATATATGGATCTTCACTGGGGAATGTTTATTCCTTTTATTAAAGGATCAGGTACTGAGGAGCAGCAAAAGAAATGGCTGCCATTGGCATACAAGATGCAAATTATTGGTTGCTATGCACAGACTGAACTTGGCCATGGCTCCAATGTCCAAGGGCTTGAGACCACTGCAAATTTTGATCCAAAGACAGACGAGTTTGTTATTCATAGCCCTACGCTAACCTCAAGCAAATGGTGGCCTGGTGGTTTGGGAAAAGTTTCAACTCACGCTGTTGTTTTTGCCCGTCTTATTACTGATGGTCAAGACCATGGAGTGAATGGTTTCATCGTCCAACTTCGGAGCTTGGATGATCACTTGCCACTTCCAGGCGTAACTGTTGGTGATATCGGAATGAAATTTGGAAGTGGAGCATACAACTCCATGGACAATGGTGTCCTAAGATTTGATCATGTGCGCATCCCAAGGGACCACATGTTGATGAGAGTCTCACAAGTTACACGAGAAGGAAAAGTTGTTCAGTCCAATGTTCCAAGACAACTACTTTATGGAACTATGGTTTTTGTTCGCCAAACAATTGTGGCTGATGCTTCCTCTGCATTGTCGCGGGCAGTATGTATTGCTACTAGGTACAGTGCTGTTCGTCGACAGTTTGGTTCAAATGACGGTGGTGTTGAGACACAGGTGATTGATTACAAGACTCAACAAAGCAGACTATTCCCCCTGCTGGCTTCCGCCTATGCTTTCAGATTTGTTGGTGAGTGGTTGAAATGGCTATATACGGATGTAACACAAAAACTGCAAGCAAATGATTTTTCTACATTGCCTGAGGCTCATGCGTGCACTGCGGGTTTAAAGTCATTGACTACTTCTGCAACTGCTGATGCCATTGAAGAATGCCGGAAATTATGTGGTGGTCATGGTTACCTTTCTAGCAGTGGGCTCCCTGAGTTGTTTGCTGTTTATATCCCGGCGTGTACATATGAAGGAGACAATATTGTTCTACTTCTACAGGTTGCAAGGTTTCTCATGAAGACTGTTTCTCAGCTACCGTCTGGTAAAAAACCCATTGGAACAACTTCCTACATGGGCCGCGCAGAACATTTGCTCCAATCTTGTTGTAATGTTCAGAAAGCTGAGGATTGGTTGAAGCCTAGTGTAATACTGGAGGCTTTTGAAGCAAGGGCTATGAGAATGTCTGTTGCCTGTGCCAAAGACCTCAGCAAGTTCACAAATCCAGAAGAGGGCTTTGCGGAACTCTCACCTAATTTGGTCGATGCAGCAGTTGCTCATTGCCAATTGATTGTTGTTTCAAAGTTCATTGAGAAACTGCAACAAGACATACCCGGGAAGGGAGTGAAAGAACAATTGCAGATCCTCTGTAATGTATATGCTTTATTTCTTGTTCACAAACATCTGGGTGATTTCCTCTCCACTGGAAGTATCACAGCCAAACAAGGTTCACTCGCCAATGATCAGCTTAGATCTCTATATTCCCAGGTCCGCCCCAATGCCATTGCCCTTGTTGATGCATTTAACTACACTGACCACTACCTTAGCTCAATTCTTGGCCGATATGATGGTAATGTGTACCCGAAACTTTACGAGGAGGCGTGGAAAGATCCTTTGAATGACACGGTTGTGCCAGAGGGATATCATGAATACATCCAACCTTTGCTGAAGCAACAGCTCCGAAATTCAAGGCTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0001676 GO:0003674 GO:0003824 GO:0003995 GO:0003997 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0005911 GO:0006082 GO:0006629 GO:0006631 GO:0006635 GO:0006950 GO:0008150 GO:0008152 GO:0009056 GO:0009058 GO:0009062 GO:0009506 GO:0009605 GO:0009607 GO:0009611 GO:0009620 GO:0009694 GO:0009695 GO:0009987 GO:0010035 GO:0010038 GO:0010817 GO:0016042 GO:0016053 GO:0016054 GO:0016491 GO:0016627 GO:0016634 GO:0019395 GO:0019752 GO:0030054 GO:0030258 GO:0032787 GO:0033539 GO:0034440 GO:0036094 GO:0042221 GO:0042445 GO:0042446 GO:0042579 GO:0043167 GO:0043168 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044249 GO:0044255 GO:0044281 GO:0044282 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0046395 GO:0046686 GO:0048037 GO:0050660 GO:0050662 GO:0050896 GO:0051704 GO:0051707 GO:0055044 GO:0055114 GO:0065007 GO:0065008 GO:0071704 GO:0072329 GO:0072330 GO:0097159 GO:1901265 GO:1901363 GO:1901575 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00071 ko00592 ko01040 ko01100 ko01110 ko01212 ko03320 ko04024 ko04146 map00071 map00592 map01040 map01100 map01110 map01212 map03320 map04024 map04146

Pfam Domains

Protein Families

ACOX Acyl-CoA_dh_M Acyl-CoA_ox_N

Protein Analysis

665

Amino Acids

74.29

Weight (kDa)

8.14

Isoelectric Point (pI)

40.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Acyl-CoA_ox_N	PF14749	17 - 132	2.1e-32	Acyl-coenzyme A oxidase N-terminal
Acyl-CoA_dh_M	PF02770	134 - 235	7.6e-09	Acyl-CoA dehydrogenase, middle domain
ACOX_C_alpha1	PF22924	278 - 439	1e-66	Acyl-CoA oxidase, C-alpha1 domain
ACOX	PF01756	480 - 656	9e-54	Acyl-CoA oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0003378)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G35690 AT4G16760 AT4G16760
fragaria_vesca	FvH4_5g19470
malus_domestica	MD04G1060500.v1.1 MD13G1127300.v1.1
prunus_persica	Prupe.5G065100_v2.0.a1 Prupe.7G067100_v2.0.a1
pyrus_communis	pycom04g05410 pycom13g11040
rosa_chinensis	RchiOBHm_Chr3g0481201 RchiOBHm_Chr3g0481221 RchiOBHm_Chr7g0204041
rosa_laevigata	RLG00000003492 RLG00000023411 RLG00000023414 RLG00000023415
rosa_multiflora	Rmu_sc0000064.1_g000003 Rmu_sc0001311.1_g000009 Rmu_sc0001551.1_g000009 Rmu_sc0001843.1_g000010 Rmu_sc0009910.1_g000005
rosa_roxburghii	Rroxscaffold_3G00253400 Rroxscaffold_6G00400590
rosa_rugosa	Rorug03G0190400 Rorug07G0080100 Rorug07G0080200
rosa_samantha	Rh3AG241300 Rh3BG276600 Rh3DG268000 Rh7AG210200 Rh7BG208600
rosa_wichuraiana	Rw3G021520 Rw3G021530 Rw3G021550 Rw7G018300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	719
Acc16I	TGCGCA	1 cut(s)	743
Acc36I	ACCTGC	1 cut(s)	295
AccB7I	CCANNNNNTGG	1 cut(s)	94
AccI	GTMKAC	1 cut(s)	931
AccII	CGCG	2 cut(s)	892, 1380
AciI	CCGC	8 cut(s)	85, 223, 892, 1020, 1133, 1378, 1538, 1789
AclWI	GGATC	8 cut(s)	21, 128, 233, 306, 343, 461, 1654, 1901
AcoI	YGGCCR	2 cut(s)	421, 1855
AcsI	RAATTY	3 cut(s)	460, 683, 1981
AcuI	CTGAAG	2 cut(s)	267, 1985
AfaI	GTAC	4 cut(s)	343, 917, 1264, 1877
AfiI	CCNNNNNNNGG	7 cut(s)	64, 94, 267, 653, 1012, 1529, 1637
AflIII	ACRYGT	1 cut(s)	759
AgsI	TTSAA	9 cut(s)	549, 945, 1054, 1178, 1435, 1463, 1599, 1915, 1986
AjnI	CCWGG	4 cut(s)	93, 526, 652, 1782
AleI	CACNNNNGTG	1 cut(s)	1925
AloI	GAACNNNNNNTCC	4 cut(s)	786, 818, 1377, 1409
AluBI	AGCT	8 cut(s)	209, 235, 630, 1333, 1421, 1765, 1845, 1975
AluI	AGCT	8 cut(s)	209, 235, 630, 1333, 1421, 1765, 1845, 1975
Alw21I	GWGCWC	1 cut(s)	1130
Alw26I	GTCTC	5 cut(s)	106, 443, 778, 956, 1269
Alw44I	GTGCAC	1 cut(s)	1126
AlwI	GGATC	8 cut(s)	21, 128, 233, 306, 343, 461, 1654, 1901
AlwNI	CAGNNNCTG	1 cut(s)	344
Ama87I	CYCGRG	1 cut(s)	1631
AoxI	GGCC	6 cut(s)	39, 75, 421, 524, 1375, 1855
ApaLI	GTGCAC	1 cut(s)	1126
ApeKI	GCWGC	4 cut(s)	206, 352, 367, 1565
ApoI	RAATTY	3 cut(s)	460, 683, 1981
Asp700I	GAANNNNTTC	3 cut(s)	544, 608, 1363
AspLEI	GCGC	2 cut(s)	744, 1382
AspS9I	GGNCC	5 cut(s)	40, 75, 754, 1375, 1786
AsuC2I	CCSGG	3 cut(s)	1256, 1632, 1633
AsuHPI	GGTGA	6 cut(s)	220, 680, 982, 1055, 1539, 1718
AvaI	CYCGRG	1 cut(s)	1631
AvaII	GGWCC	2 cut(s)	754, 1786
AxyI	CCTNAGG	1 cut(s)	1113
BaeGI	GKGCMC	1 cut(s)	1130
BalI	TGGCCA	1 cut(s)	423
BanII	GRGCYC	1 cut(s)	1230
BauI	CACGAG	1 cut(s)	786
BbsI	GAAGAC	1 cut(s)	1325
Bbv12I	GWGCWC	1 cut(s)	1130
BbvCI	CCTCAGC	2 cut(s)	1422, 1505
BbvI	GCAGC	4 cut(s)	218, 354, 364, 1577
BccI	CCATC	2 cut(s)	578, 1859
BcgI	CGANNNNNNTGC	4 cut(s)	95, 129, 269, 303
BciT130I	CCWGG	4 cut(s)	95, 528, 654, 1784
BclI	TGATCA	3 cut(s)	637, 733, 1759
BcnI	CCSGG	3 cut(s)	1256, 1632, 1633
BcoDI	GTCTC	5 cut(s)	106, 443, 778, 956, 1269
BfaI	CTAG	4 cut(s)	162, 912, 1218, 1440
BfmI	CTRYAG	1 cut(s)	1295
BfuAI	ACCTGC	1 cut(s)	295
BglII	AGATCT	1 cut(s)	1769
BisI	GCNGC	5 cut(s)	207, 353, 368, 1378, 1566
BlsI	GCNGC	5 cut(s)	208, 354, 369, 1379, 1567
Bme1390I	CCNGG	7 cut(s)	95, 528, 654, 1256, 1632, 1633, 1784
Bme18I	GGWCC	2 cut(s)	754, 1786
BmeT110I	CYCGRG	1 cut(s)	1631
BmgT120I	GGNCC	5 cut(s)	40, 75, 754, 1375, 1786
BmiI	GGNNCC	4 cut(s)	82, 430, 755, 1229
BmrFI	CCNGG	7 cut(s)	95, 528, 654, 1256, 1632, 1633, 1784
BmrI	ACTGGG	2 cut(s)	37, 316
BmsI	GCATC	7 cut(s)	266, 375, 753, 862, 1159, 1552, 1804
BmuI	ACTGGG	2 cut(s)	37, 316
BpiI	GAAGAC	1 cut(s)	1325
BpmI	CTGGAG	2 cut(s)	116, 1472
Bpu10I	CCTNAGC	3 cut(s)	1422, 1505, 1841
BpuEI	CTTGAG	2 cut(s)	467, 496
BpuMI	CCSGG	3 cut(s)	1256, 1632, 1633
BsaI	GGTCTC	2 cut(s)	106, 443
BsaJI	CCNNGG	8 cut(s)	93, 424, 439, 595, 708, 749, 1631, 1782
BsaWI	WCCGGW	1 cut(s)	136
BsaXI	ACNNNNNCTCC	2 cut(s)	1377, 1407
Bsc4I	CCNNNNNNNGG	7 cut(s)	64, 94, 267, 653, 1012, 1529, 1637
Bse118I	RCCGGY	1 cut(s)	77
Bse1I	ACTGG	4 cut(s)	43, 311, 1455, 1726
Bse21I	CCTNAGG	1 cut(s)	1113
Bse3DI	GCAATG	3 cut(s)	1106, 1576, 1800
BseBI	CCWGG	4 cut(s)	95, 528, 654, 1784
BseDI	CCNNGG	8 cut(s)	93, 424, 439, 595, 708, 749, 1631, 1782
BseGI	GGATG	6 cut(s)	157, 257, 640, 744, 1075, 1950
BseLI	CCNNNNNNNGG	7 cut(s)	64, 94, 267, 653, 1012, 1529, 1637
BseMI	GCAATG	3 cut(s)	1106, 1576, 1800
BseMII	CTCAG	7 cut(s)	188, 336, 1104, 1224, 1343, 1413, 1519
BseNI	ACTGG	4 cut(s)	43, 311, 1455, 1726
BseRI	GAGGAG	2 cut(s)	362, 1907
BseSI	GKGCMC	1 cut(s)	1130
BseXI	GCAGC	4 cut(s)	218, 354, 364, 1577
Bsh1236I	CGCG	2 cut(s)	892, 1380
Bsh1285I	CGRYCG	1 cut(s)	109
BshFI	GGCC	6 cut(s)	41, 77, 423, 526, 1377, 1857
BsiEI	CGRYCG	1 cut(s)	109
BsiHKAI	GWGCWC	1 cut(s)	1130
BsiHKCI	CYCGRG	1 cut(s)	1631
BsiSI	CCGG	5 cut(s)	78, 137, 1186, 1256, 1632
BslFI	GGGAC	1 cut(s)	767
BslI	CCNNNNNNNGG	7 cut(s)	64, 94, 267, 653, 1012, 1529, 1637
BsmAI	GTCTC	5 cut(s)	106, 443, 778, 956, 1269
BsmFI	GGGAC	1 cut(s)	767
BsmI	GAATGC	1 cut(s)	1187
BsnI	GGCC	6 cut(s)	41, 77, 423, 526, 1377, 1857
Bso31I	GGTCTC	2 cut(s)	106, 443
BsoBI	CYCGRG	1 cut(s)	1631
Bsp1286I	GDGCHC	2 cut(s)	1130, 1230
Bsp1407I	TGTACA	1 cut(s)	1262
Bsp19I	CCATGG	3 cut(s)	424, 595, 708
BspACI	CCGC	8 cut(s)	85, 223, 892, 1020, 1133, 1378, 1538, 1789
BspANI	GGCC	6 cut(s)	41, 77, 423, 526, 1377, 1857
BspCNI	CTCAG	7 cut(s)	189, 337, 1105, 1225, 1342, 1414, 1518
BspFNI	CGCG	2 cut(s)	892, 1380
BspHI	TCATGA	2 cut(s)	1314, 1942
BspLI	GGNNCC	4 cut(s)	82, 430, 755, 1229
BspMI	ACCTGC	1 cut(s)	295
BspPI	GGATC	8 cut(s)	21, 128, 233, 306, 343, 461, 1654, 1901
BspTNI	GGTCTC	2 cut(s)	106, 443
BsrDI	GCAATG	3 cut(s)	1106, 1576, 1800
BsrFI	RCCGGY	1 cut(s)	77
BsrGI	TGTACA	1 cut(s)	1262
BsrI	ACTGG	4 cut(s)	43, 311, 1455, 1726
BssAI	RCCGGY	1 cut(s)	77
BssECI	CCNNGG	8 cut(s)	93, 424, 439, 595, 708, 749, 1631, 1782
BssSI	CACGAG	1 cut(s)	786
BssT1I	CCWWGG	5 cut(s)	424, 439, 595, 708, 749
Bst2BI	CACGAG	1 cut(s)	786
Bst2UI	CCWGG	4 cut(s)	95, 528, 654, 1784
Bst4CI	ACNGT	7 cut(s)	664, 920, 936, 953, 1324, 1338, 1924
Bst6I	CTCTTC	2 cut(s)	246, 1521
BstAPI	GCANNNNNTGC	1 cut(s)	1571
BstAUI	TGTACA	1 cut(s)	1262
BstC8I	GCNNGC	6 cut(s)	79, 118, 894, 1014, 1089, 1126
BstDSI	CCRYGG	3 cut(s)	424, 595, 708
BstEII	GGTNACC	1 cut(s)	1208
BstF5I	GGATG	6 cut(s)	157, 257, 640, 744, 1075, 1950
BstFNI	CGCG	2 cut(s)	892, 1380
BstHHI	GCGC	2 cut(s)	744, 1382
BstMAI	GTCTC	5 cut(s)	106, 443, 778, 956, 1269
BstMCI	CGRYCG	1 cut(s)	109
BstMWI	GCNNNNNNNGC	4 cut(s)	881, 1130, 1463, 1571
BstNI	CCWGG	4 cut(s)	95, 528, 654, 1784
BstNSI	RCATGY	1 cut(s)	763
BstPI	GGTNACC	1 cut(s)	1208
BstSCI	CCNGG	7 cut(s)	93, 526, 652, 1254, 1630, 1631, 1782
BstSFI	CTRYAG	1 cut(s)	1295
BstSLI	GKGCMC	1 cut(s)	1130
BstUI	CGCG	2 cut(s)	892, 1380
BstV1I	GCAGC	4 cut(s)	218, 354, 364, 1577
BstV2I	GAAGAC	1 cut(s)	1325
BstX2I	RGATCY	4 cut(s)	298, 1659, 1769, 1906
BstYI	RGATCY	4 cut(s)	298, 1659, 1769, 1906
Bsu36I	CCTNAGG	1 cut(s)	1113
BsuRI	GGCC	6 cut(s)	41, 77, 423, 526, 1377, 1857
BtgI	CCRYGG	3 cut(s)	424, 595, 708
BtsCI	GGATG	6 cut(s)	157, 257, 640, 744, 1075, 1950
BtsI	GCAGTG	3 cut(s)	453, 1128, 1228
BtsIMutI	CAGTG	7 cut(s)	304, 453, 925, 1128, 1228, 1719, 1827
BveI	ACCTGC	1 cut(s)	295
Cac8I	GCNNGC	6 cut(s)	79, 118, 894, 1014, 1089, 1126
CaiI	CAGNNNCTG	1 cut(s)	344
CciI	TCATGA	2 cut(s)	1314, 1942
CfoI	GCGC	2 cut(s)	744, 1382
Cfr10I	RCCGGY	1 cut(s)	77
Cfr13I	GGNCC	5 cut(s)	40, 75, 754, 1375, 1786
Cfr9I	CCCGGG	1 cut(s)	1631
Csp6I	GTAC	4 cut(s)	342, 916, 1263, 1876
CviQI	GTAC	4 cut(s)	342, 916, 1263, 1876
DraI	TTTAAA	3 cut(s)	145, 187, 1140
DrdI	GACNNNNNNGTC	1 cut(s)	719
DseDI	GACNNNNNNGTC	1 cut(s)	719
EaeI	YGGCCR	2 cut(s)	421, 1855
Eam1104I	CTCTTC	2 cut(s)	246, 1521
EarI	CTCTTC	2 cut(s)	246, 1521
EciI	GGCGGA	2 cut(s)	1009, 1778
Eco130I	CCWWGG	5 cut(s)	424, 439, 595, 708, 749
Eco24I	GRGCYC	1 cut(s)	1230
Eco31I	GGTCTC	2 cut(s)	106, 443
Eco32I	GATATC	2 cut(s)	673, 1940
Eco47I	GGWCC	2 cut(s)	754, 1786
Eco57I	CTGAAG	2 cut(s)	267, 1985
Eco81I	CCTNAGG	1 cut(s)	1113
Eco88I	CYCGRG	1 cut(s)	1631
Eco91I	GGTNACC	1 cut(s)	1208
EcoO65I	GGTNACC	1 cut(s)	1208
EcoRII	CCWGG	4 cut(s)	93, 526, 652, 1782
EcoRV	GATATC	2 cut(s)	673, 1940
EcoT14I	CCWWGG	5 cut(s)	424, 439, 595, 708, 749
EcoT22I	ATGCAT	1 cut(s)	1819
EcoT38I	GRGCYC	1 cut(s)	1230
ErhI	CCWWGG	5 cut(s)	424, 439, 595, 708, 749
FaqI	GGGAC	1 cut(s)	767
FauI	CCCGC	3 cut(s)	92, 885, 1126
FauNDI	CATATG	1 cut(s)	1267
FbaI	TGATCA	3 cut(s)	637, 733, 1759
FblI	GTMKAC	1 cut(s)	931
Fnu4HI	GCNGC	5 cut(s)	207, 353, 368, 1378, 1566
FokI	GGATG	6 cut(s)	164, 244, 647, 731, 1082, 1937
FriOI	GRGCYC	1 cut(s)	1230
Fsp4HI	GCNGC	5 cut(s)	207, 353, 368, 1378, 1566
FspAI	RTGCGCAY	1 cut(s)	743
FspBI	CTAG	4 cut(s)	162, 912, 1218, 1440
FspI	TGCGCA	1 cut(s)	743
GlaI	GCGC	2 cut(s)	743, 1381
GluI	GCNGC	5 cut(s)	207, 353, 368, 1378, 1566
GsuI	CTGGAG	2 cut(s)	116, 1472
HaeIII	GGCC	6 cut(s)	41, 77, 423, 526, 1377, 1857
HapII	CCGG	5 cut(s)	78, 137, 1186, 1256, 1632
HhaI	GCGC	2 cut(s)	744, 1382
Hin6I	GCGC	2 cut(s)	742, 1380
HinP1I	GCGC	2 cut(s)	742, 1380
HincII	GTYRAC	2 cut(s)	55, 932
HindII	GTYRAC	2 cut(s)	55, 932
HinfI	GANTC	2 cut(s)	771, 985
HpaII	CCGG	5 cut(s)	78, 137, 1186, 1256, 1632
HphI	GGTGA	6 cut(s)	220, 680, 982, 1055, 1539, 1718
Hpy166II	GTNNAC	8 cut(s)	55, 932, 1128, 1263, 1515, 1693, 1748, 1876
Hpy188I	TCNGA	9 cut(s)	106, 111, 133, 198, 627, 677, 1034, 1416, 1979
Hpy188III	TCNNGA	6 cut(s)	26, 217, 590, 1315, 1523, 1943
Hpy8I	GTNNAC	8 cut(s)	55, 932, 1128, 1263, 1515, 1693, 1748, 1876
Hpy99I	CGWCG	2 cut(s)	128, 933
HpyAV	CCTTC	5 cut(s)	58, 169, 785, 1265, 1630
HpyCH4III	ACNGT	7 cut(s)	664, 920, 936, 953, 1324, 1338, 1924
HpyF10VI	GCNNNNNNNGC	4 cut(s)	881, 1130, 1463, 1571
HspAI	GCGC	2 cut(s)	742, 1380
KroI	GCCGGC	1 cut(s)	77
KroNI	GCCGGC	1 cut(s)	79
Ksp22I	TGATCA	3 cut(s)	637, 733, 1759
LmnI	GCTCC	9 cut(s)	33, 86, 349, 434, 627, 695, 1233, 1398, 1980
Lsp1109I	GCAGC	4 cut(s)	218, 354, 364, 1577
LweI	GCATC	7 cut(s)	266, 375, 753, 862, 1159, 1552, 1804
MaeI	CTAG	4 cut(s)	162, 912, 1218, 1440
MaeIII	GTNAC	4 cut(s)	658, 781, 1072, 1208
MboII	GAAGA	6 cut(s)	260, 263, 293, 1190, 1330, 1538
MfeI	CAATTG	3 cut(s)	861, 1583, 1652
MflI	RGATCY	4 cut(s)	298, 1659, 1769, 1906
MhlI	GDGCHC	2 cut(s)	1130, 1230
MlsI	TGGCCA	1 cut(s)	423
MluNI	TGGCCA	1 cut(s)	423
MlyI	GAGTC	2 cut(s)	780, 979
MmeI	TCCRAC	2 cut(s)	643, 1978
Mox20I	TGGCCA	1 cut(s)	423
Mph1103I	ATGCAT	1 cut(s)	1819
MroNI	GCCGGC	1 cut(s)	77
MroXI	GAANNNNTTC	3 cut(s)	544, 608, 1363
MscI	TGGCCA	1 cut(s)	423
MseI	TTAA	6 cut(s)	144, 186, 237, 330, 1139, 1821
MslI	CAYNNNNRTG	3 cut(s)	764, 1704, 1925
Msp20I	TGGCCA	1 cut(s)	423
MspI	CCGG	5 cut(s)	78, 137, 1186, 1256, 1632
MspR9I	CCNGG	7 cut(s)	95, 528, 654, 1256, 1632, 1633, 1784
MunI	CAATTG	3 cut(s)	861, 1583, 1652
Mva1269I	GAATGC	1 cut(s)	1187
MvaI	CCWGG	4 cut(s)	95, 528, 654, 1784
MvnI	CGCG	2 cut(s)	892, 1380
MwoI	GCNNNNNNNGC	4 cut(s)	881, 1130, 1463, 1571
NaeI	GCCGGC	1 cut(s)	79
NciI	CCSGG	3 cut(s)	1256, 1632, 1633
NcoI	CCATGG	3 cut(s)	424, 595, 708
NdeI	CATATG	1 cut(s)	1267
NgoMIV	GCCGGC	1 cut(s)	77
NlaIV	GGNNCC	4 cut(s)	82, 430, 755, 1229
NsbI	TGCGCA	1 cut(s)	743
NsiI	ATGCAT	1 cut(s)	1819
NspI	RCATGY	1 cut(s)	763
OliI	CACNNNNGTG	1 cut(s)	1925
PagI	TCATGA	2 cut(s)	1314, 1942
PciI	ACATGT	1 cut(s)	759
PcsI	WCGNNNNNNNCGW	1 cut(s)	129
PctI	GAATGC	1 cut(s)	1187
PdiI	GCCGGC	1 cut(s)	79
PdmI	GAANNNNTTC	3 cut(s)	544, 608, 1363
PflMI	CCANNNNNTGG	1 cut(s)	94
PkrI	GCNGC	5 cut(s)	208, 354, 369, 1379, 1567
Ple19I	CGATCG	1 cut(s)	109
PleI	GAGTC	2 cut(s)	779, 979
PpsI	GAGTC	2 cut(s)	779, 979
PscI	ACATGT	1 cut(s)	759
Psp6I	CCWGG	4 cut(s)	93, 526, 652, 1782
PspEI	GGTNACC	1 cut(s)	1208
PspGI	CCWGG	4 cut(s)	93, 526, 652, 1782
PspN4I	GGNNCC	4 cut(s)	82, 430, 755, 1229
PspPI	GGNCC	5 cut(s)	40, 75, 754, 1375, 1786
PstNI	CAGNNNCTG	1 cut(s)	344
PsuI	RGATCY	4 cut(s)	298, 1659, 1769, 1906
PvuI	CGATCG	1 cut(s)	109
RsaI	GTAC	4 cut(s)	343, 917, 1264, 1877
RsaNI	GTAC	4 cut(s)	342, 916, 1263, 1876
RseI	CAYNNNNRTG	3 cut(s)	764, 1704, 1925
SalI	GTCGAC	1 cut(s)	930
SaqAI	TTAA	6 cut(s)	144, 186, 237, 330, 1139, 1821
SatI	GCNGC	5 cut(s)	207, 353, 368, 1378, 1566
Sau96I	GGNCC	5 cut(s)	40, 75, 754, 1375, 1786
SchI	GAGTC	2 cut(s)	780, 979
ScrFI	CCNGG	7 cut(s)	95, 528, 654, 1256, 1632, 1633, 1784
SduI	GDGCHC	2 cut(s)	1130, 1230
SfaNI	GCATC	7 cut(s)	266, 375, 753, 862, 1159, 1552, 1804
SfcI	CTRYAG	1 cut(s)	1295
SinI	GGWCC	2 cut(s)	754, 1786
SmaI	CCCGGG	1 cut(s)	1633
SmiMI	CAYNNNNRTG	3 cut(s)	764, 1704, 1925
SmlI	CTYRAG	2 cut(s)	446, 511
SmoI	CTYRAG	2 cut(s)	446, 511
SsiI	CCGC	8 cut(s)	85, 223, 892, 1020, 1133, 1378, 1538, 1789
SspI	AATATT	1 cut(s)	1282
SspMI	CTAG	4 cut(s)	162, 912, 1218, 1440
StyD4I	CCNGG	7 cut(s)	93, 526, 652, 1254, 1630, 1631, 1782
StyI	CCWWGG	5 cut(s)	424, 439, 595, 708, 749
TaaI	ACNGT	7 cut(s)	664, 920, 936, 953, 1324, 1338, 1924
TaqI	TCGA	4 cut(s)	48, 279, 931, 1560
TatI	WGTACW	1 cut(s)	1262
TauI	GCSGC	1 cut(s)	1380
Tru1I	TTAA	6 cut(s)	144, 186, 237, 330, 1139, 1821
Tru9I	TTAA	6 cut(s)	144, 186, 237, 330, 1139, 1821
TscAI	CASTG	7 cut(s)	311, 460, 925, 1135, 1228, 1726, 1834
TseI	GCWGC	4 cut(s)	206, 352, 367, 1565
TspDTI	ATGAA	8 cut(s)	77, 482, 601, 695, 1284, 1331, 1594, 1959
TspGWI	ACGGA	1 cut(s)	1082
TspMI	CCCGGG	1 cut(s)	1631
TspRI	CASTG	7 cut(s)	311, 460, 925, 1135, 1228, 1726, 1834
Van91I	CCANNNNNTGG	1 cut(s)	94
VneI	GTGCAC	1 cut(s)	1126
VpaK11BI	GGWCC	2 cut(s)	754, 1786
XapI	RAATTY	3 cut(s)	460, 683, 1981
XceI	RCATGY	1 cut(s)	763
XcmI	CCANNNNNNNNNTGG	1 cut(s)	602
XmaI	CCCGGG	1 cut(s)	1631
XmiI	GTMKAC	1 cut(s)	931
XmnI	GAANNNNTTC	3 cut(s)	544, 608, 1363
XspI	CTAG	4 cut(s)	162, 912, 1218, 1440
Zsp2I	ATGCAT	1 cut(s)	1819

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.