Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0003378

Physical Location & Seq

Genomic Coordinates Reverse (-)

23284938 .. 23286949

Gene Structure 2012 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000023411

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1977 bp

ATGGAAGGCATAATGGATCATTTGGCGCATGAGAGGAGCAAGGCACAGTTCAGTGTCAAGGAGATGAAGGTCATCTGGGCTGGTTCTCTCCACGCCTTCCAAGTCTCTGATCGGATCGCTCGACTCGTGGCCAGCGATCTAGGCTTTAGAAAGGACAACAGAGCTGTGCTAAGCAGGAAGGATTTGTTTAAAAGTGCTCTGAGAAAAGCAGCTTATGTGTGGAAAAGGATCAATGAGCTTGTACTTTCTGAAGAAGAGGCATCATGGTTGAGGTTCTATGTTGATGAATTAGCATATGCTTATTTGCATTGGACAATGTTTGTGCCTGCTATTAAAGGGTCTGCTACAGAGGAGCAGCAACAAAAGTGGTTACCTTTGGCAAACAACATGCAGATAATCGGTACTTACGCACAAACTGAACTTGGTCATGGCTCCAATGAGACAGATGAGTTCATTATCCATAGTCCTACACTGACCTCAAGCAAATGGTGGGCTGGTGGACTGGGAAAGGTTGCTACACATGTTGTTGTTTATGCCCTGCTTATTACGGATGGCCAAGATTATGGAGTTCATGGTTTCCTAGTCCAAATTCGGAGCTTGGATGATCACTTTCCTCTTCCAGGTGTTACAGTTGGTGATATTGGGATGAAATTTGGAAGTGGAGCATTCAATTCCATGGACAATGGTTTCCTTAGATTCGATCATGTGCGCATTCCAAGGAATCAAATGCTGATGAGGGTCTCTCAAGTCACTAGACAAGGAAAGTATGTAGAATCCAACGTTCCAAAGCAGCTAATTTATGGAGCTATGGTTTATGTGAGACAAACCATTGTAGCTGATTCTTCCATTTTTTTGTCAAAAGCAGTATGTATTGCTACCAGGTATAGTGCTGTTCGTCGACAATTTGGTCCTCCACATAAGGATCAAAATGGTAATGGTGTTGAGACACAAGTCATTGATTACAAGACTCAGCAAAGTAGACTCTTCCCTTTGCTGGCTTCTGCCTATGCTTTCAAATTTGTTGGCGAGTGGTTGAAATGGCTATACAGAGATTTGATCCAAAAGTTGGAAGCAAACGATTTCTCTACACTCCCCGAGGTGCATGCCTGCACTGCTGGTTTGAAGTCCTTGACTACTTCTTCTGCTGCTGATGGCATTGAAGAATGTCGAAAGCTATGTGGTGGCCATGGTTACTTGTCTAGCAGTGGACTTCCTGAGCTATATGCTTCTTTTGTCCTTACTTGTACTTACGAAGGAGATAACATTGTACTGCTTCTTCAGGTTTCAAGGTTTCTCATGAAGACCATTTCTCAGTTGCAGACAGGGAAAAAGCCTATTGGAACTACGGCTTATATGGGGCATGTGGAGCATTTGATCCAATGTCGCTATAAGGTTCAAAAAGCTGAGGATTGGTTGAACCCCAGTGTAATACTTGAGGCATTTGAAGCAAGGGCTATTAGATTGTCGGTTGCTTGTGCCGAAAATCTGACCAAGTTTGCCACTCCATTACAAGGCTTTTCAGAACTCTCACCTAATTTAGTTGAACCTGCAGTTGCTCATTGCCAACTAATTGTGGTTTCCAAGTTCATTGAGAAGCTGCAGCAAAACATTGAAGGAAATGGAGTGAAACAACAATTGGAGACCCTCTGCAACATTTACTGTTTGAATCTTATTCACAAACATCTGGGTGATTTTCTATCCACCGGAAGCATCAGTCCCAAGCAAGTTTCACTTGCCAGTGATCAACTCAGGAGTCTGTATTCCAAGCTTCGTCCCAATGTTATTGCCCTTGTTGATGCATTTAATTACACAGATCATTTCCTTGGCTCAGTTCTTGGGCGCTATGACGGTAATGTGTATCCAAAGCTCTATGAGGAAGCATGCAAAGATCCGCTCAATGATTCTATTGTACCTAATGGGTATCATGAATACATCCAGCCTATGCTGAAGCAACAGCTCCAAAATGCAAGGCTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0001676 GO:0003674 GO:0003824 GO:0003995 GO:0003997 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0005911 GO:0006082 GO:0006629 GO:0006631 GO:0006635 GO:0006950 GO:0008150 GO:0008152 GO:0009056 GO:0009058 GO:0009062 GO:0009506 GO:0009605 GO:0009607 GO:0009611 GO:0009620 GO:0009694 GO:0009695 GO:0009987 GO:0010035 GO:0010038 GO:0010817 GO:0016042 GO:0016053 GO:0016054 GO:0016491 GO:0016627 GO:0016634 GO:0019395 GO:0019752 GO:0030054 GO:0030258 GO:0032787 GO:0033539 GO:0034440 GO:0036094 GO:0042221 GO:0042445 GO:0042446 GO:0042579 GO:0043167 GO:0043168 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044249 GO:0044255 GO:0044281 GO:0044282 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0046395 GO:0046686 GO:0048037 GO:0050660 GO:0050662 GO:0050896 GO:0051704 GO:0051707 GO:0055044 GO:0055114 GO:0065007 GO:0065008 GO:0071704 GO:0072329 GO:0072330 GO:0097159 GO:1901265 GO:1901363 GO:1901575 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00071 ko00592 ko01040 ko01100 ko01110 ko01212 ko03320 ko04024 ko04146 map00071 map00592 map01040 map01100 map01110 map01212 map03320 map04024 map04146

Pfam Domains

Protein Families

ACOX Acyl-CoA_dh_M Acyl-CoA_ox_N

Protein Analysis

659

Amino Acids

73.9

Weight (kDa)

8.31

Isoelectric Point (pI)

38.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Acyl-CoA_ox_N	PF14749	19 - 133	6e-27	Acyl-coenzyme A oxidase N-terminal
ACOX_C_alpha1	PF22924	267 - 433	3.1e-65	Acyl-CoA oxidase, C-alpha1 domain
ACOX	PF01756	473 - 650	3.8e-54	Acyl-CoA oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003378)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G35690 AT4G16760 AT4G16760
fragaria_vesca	FvH4_5g19470
malus_domestica	MD04G1060500.v1.1 MD13G1127300.v1.1
prunus_persica	Prupe.5G065100_v2.0.a1 Prupe.7G067100_v2.0.a1
pyrus_communis	pycom04g05410 pycom13g11040
rosa_chinensis	RchiOBHm_Chr3g0481201 RchiOBHm_Chr3g0481221 RchiOBHm_Chr7g0204041
rosa_laevigata	RLG00000003492 RLG00000023411 RLG00000023414 RLG00000023415
rosa_multiflora	Rmu_sc0000064.1_g000003 Rmu_sc0001311.1_g000009 Rmu_sc0001551.1_g000009 Rmu_sc0001843.1_g000010 Rmu_sc0009910.1_g000005
rosa_roxburghii	Rroxscaffold_3G00253400 Rroxscaffold_6G00400590
rosa_rugosa	Rorug03G0190400 Rorug07G0080100 Rorug07G0080200
rosa_samantha	Rh3AG241300 Rh3BG276600 Rh3DG268000 Rh7AG210200 Rh7BG208600
rosa_wichuraiana	Rw3G021520 Rw3G021530 Rw3G021550 Rw7G018300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	906
Acc16I	TGCGCA	1 cut(s)	710
Acc36I	ACCTGC	1 cut(s)	1555
AccB7I	CCANNNNNTGG	1 cut(s)	1066
AccBSI	CCGCTC	1 cut(s)	1894
AccI	GTMKAC	2 cut(s)	898, 979
AciI	CCGC	1 cut(s)	1892
AclI	AACGTT	1 cut(s)	780
AclWI	GGATC	7 cut(s)	24, 122, 236, 930, 1051, 1369, 1883
AcoI	YGGCCR	3 cut(s)	129, 553, 1183
AcsI	RAATTY	3 cut(s)	588, 650, 1016
AcuI	CTGAAG	3 cut(s)	270, 1262, 1967
AfaI	GTAC	5 cut(s)	243, 403, 1246, 1269, 1911
AfiI	CCNNNNNNNGG	4 cut(s)	620, 994, 1066, 1511
AflIII	ACRYGT	1 cut(s)	520
AjnI	CCWGG	2 cut(s)	619, 878
AjuI	GAANNNNNNNTTGG	2 cut(s)	1619, 1651
Alw21I	GWGCWC	1 cut(s)	199
Alw26I	GTCTC	6 cut(s)	109, 434, 745, 814, 938, 1634
AlwI	GGATC	7 cut(s)	24, 122, 236, 930, 1051, 1369, 1883
Ama87I	CYCGRG	1 cut(s)	1094
AoxI	GGCC	3 cut(s)	129, 553, 1183
ApeKI	GCWGC	6 cut(s)	209, 355, 790, 1145, 1597, 1600
ApoI	RAATTY	3 cut(s)	588, 650, 1016
AspLEI	GCGC	3 cut(s)	28, 711, 1842
AspS9I	GGNCC	1 cut(s)	908
AsuHPI	GGTGA	3 cut(s)	647, 1521, 1700
AvaI	CYCGRG	1 cut(s)	1094
AvaII	GGWCC	1 cut(s)	908
BalI	TGGCCA	3 cut(s)	131, 555, 1185
BarI	GAAGNNNNNNTAC	2 cut(s)	1260, 1292
BauI	CACGAG	1 cut(s)	125
BbsI	GAAGAC	1 cut(s)	1307
Bbv12I	GWGCWC	1 cut(s)	199
BbvCI	CCTCAGC	1 cut(s)	1404
BbvI	GCAGC	6 cut(s)	221, 367, 802, 1132, 1584, 1612
BccI	CCATC	2 cut(s)	545, 1145
BceAI	ACGGC	1 cut(s)	1362
BcgI	CGANNNNNNTGC	2 cut(s)	1085, 1119
BciT130I	CCWGG	2 cut(s)	621, 880
BciVI	GTATCC	1 cut(s)	1869
BclI	TGATCA	2 cut(s)	604, 1741
BcoDI	GTCTC	6 cut(s)	109, 434, 745, 814, 938, 1634
BfaI	CTAG	4 cut(s)	140, 581, 753, 1200
BfmI	CTRYAG	3 cut(s)	345, 1548, 1598
BfoI	RGCGCY	1 cut(s)	1843
BfuAI	ACCTGC	1 cut(s)	1555
BfuI	GTATCC	1 cut(s)	1869
BisI	GCNGC	6 cut(s)	210, 356, 791, 1146, 1598, 1601
BlpI	GCTNAGC	1 cut(s)	170
BlsI	GCNGC	6 cut(s)	211, 357, 792, 1147, 1599, 1602
Bme1390I	CCNGG	2 cut(s)	621, 880
Bme18I	GGWCC	1 cut(s)	908
BmeT110I	CYCGRG	1 cut(s)	1094
BmgT120I	GGNCC	1 cut(s)	908
BmiI	GGNNCC	1 cut(s)	433
BmrFI	CCNGG	2 cut(s)	621, 880
BmrI	ACTGGG	2 cut(s)	512, 1416
BmsI	GCATC	3 cut(s)	269, 1719, 1786
BmuI	ACTGGG	2 cut(s)	512, 1416
BoxI	GACNNNNGTC	1 cut(s)	950
BpiI	GAAGAC	1 cut(s)	1307
BplI	GAGNNNNNCTC	2 cut(s)	727, 759
Bpu10I	CCTNAGC	2 cut(s)	1215, 1404
Bpu1102I	GCTNAGC	1 cut(s)	170
BpuEI	CTTGAG	3 cut(s)	463, 729, 1454
BsaI	GGTCTC	2 cut(s)	745, 1634
BsaJI	CCNNGG	5 cut(s)	675, 716, 1095, 1186, 1822
BsaWI	WCCGGW	1 cut(s)	1703
BsaXI	ACNNNNNCTCC	2 cut(s)	795, 825
Bsc4I	CCNNNNNNNGG	4 cut(s)	620, 994, 1066, 1511
Bse1I	ACTGG	3 cut(s)	507, 1422, 1737
Bse3DI	GCAATG	1 cut(s)	1558
BseBI	CCWGG	2 cut(s)	621, 880
BseDI	CCNNGG	5 cut(s)	675, 716, 1095, 1186, 1822
BseGI	GGATG	4 cut(s)	556, 607, 651, 1932
BseLI	CCNNNNNNNGG	4 cut(s)	620, 994, 1066, 1511
BseMI	GCAATG	1 cut(s)	1558
BseMII	CTCAG	7 cut(s)	191, 983, 1206, 1325, 1395, 1762, 1842
BseNI	ACTGG	3 cut(s)	507, 1422, 1737
BseRI	GAGGAG	2 cut(s)	49, 365
BseXI	GCAGC	6 cut(s)	221, 367, 802, 1132, 1584, 1612
BsgI	GTGCAG	1 cut(s)	1093
BshFI	GGCC	3 cut(s)	131, 555, 1185
BsiHKAI	GWGCWC	1 cut(s)	199
BsiHKCI	CYCGRG	1 cut(s)	1094
BsiSI	CCGG	1 cut(s)	1704
BslFI	GGGAC	2 cut(s)	1701, 1758
BslI	CCNNNNNNNGG	4 cut(s)	620, 994, 1066, 1511
BsmAI	GTCTC	6 cut(s)	109, 434, 745, 814, 938, 1634
BsmFI	GGGAC	2 cut(s)	1701, 1758
BsmI	GAATGC	2 cut(s)	665, 711
BsnI	GGCC	3 cut(s)	131, 555, 1185
Bso31I	GGTCTC	2 cut(s)	745, 1634
BsoBI	CYCGRG	1 cut(s)	1094
Bsp1286I	GDGCHC	1 cut(s)	199
Bsp1720I	GCTNAGC	1 cut(s)	170
Bsp19I	CCATGG	2 cut(s)	675, 1186
BspACI	CCGC	1 cut(s)	1892
BspANI	GGCC	3 cut(s)	131, 555, 1185
BspCNI	CTCAG	7 cut(s)	192, 982, 1207, 1324, 1396, 1761, 1841
BspHI	TCATGA	2 cut(s)	1296, 1924
BspLI	GGNNCC	1 cut(s)	433
BspMAI	CTGCAG	2 cut(s)	1552, 1602
BspMI	ACCTGC	1 cut(s)	1555
BspPI	GGATC	7 cut(s)	24, 122, 236, 930, 1051, 1369, 1883
BspTNI	GGTCTC	2 cut(s)	745, 1634
BsrBI	CCGCTC	1 cut(s)	1894
BsrDI	GCAATG	1 cut(s)	1558
BsrI	ACTGG	3 cut(s)	507, 1422, 1737
BssECI	CCNNGG	5 cut(s)	675, 716, 1095, 1186, 1822
BssSI	CACGAG	1 cut(s)	125
BssT1I	CCWWGG	4 cut(s)	675, 716, 1186, 1822
Bst2BI	CACGAG	1 cut(s)	125
Bst2UI	CCWGG	2 cut(s)	621, 880
Bst4CI	ACNGT	4 cut(s)	48, 631, 1661, 1850
Bst6I	CTCTTC	3 cut(s)	249, 621, 989
BstC8I	GCNNGC	6 cut(s)	133, 327, 996, 1104, 1108, 1882
BstDEI	CTNAG	9 cut(s)	170, 200, 692, 969, 1215, 1311, 1404, 1748, 1828
BstDSI	CCRYGG	2 cut(s)	675, 1186
BstEII	GGTNACC	1 cut(s)	369
BstENI	CCTNNNNNAGG	1 cut(s)	618
BstF5I	GGATG	4 cut(s)	556, 607, 651, 1932
BstH2I	RGCGCY	1 cut(s)	1843
BstHHI	GCGC	3 cut(s)	28, 711, 1842
BstMAI	GTCTC	6 cut(s)	109, 434, 745, 814, 938, 1634
BstMWI	GCNNNNNNNGC	4 cut(s)	141, 1112, 1366, 1445
BstNI	CCWGG	2 cut(s)	621, 880
BstNSI	RCATGY	5 cut(s)	391, 524, 1106, 1364, 1884
BstPAI	GACNNNNGTC	1 cut(s)	950
BstPI	GGTNACC	1 cut(s)	369
BstSCI	CCNGG	2 cut(s)	619, 878
BstSFI	CTRYAG	3 cut(s)	345, 1548, 1598
BstV1I	GCAGC	6 cut(s)	221, 367, 802, 1132, 1584, 1612
BstV2I	GAAGAC	1 cut(s)	1307
BstX2I	RGATCY	1 cut(s)	1888
BstXI	CCANNNNNNTGG	1 cut(s)	563
BstYI	RGATCY	1 cut(s)	1888
BsuI	GTATCC	1 cut(s)	1869
BsuRI	GGCC	3 cut(s)	131, 555, 1185
BtgI	CCRYGG	2 cut(s)	675, 1186
BtsCI	GGATG	4 cut(s)	556, 607, 651, 1932
BtsI	GCAGTG	2 cut(s)	1110, 1210
BtsIMutI	CAGTG	6 cut(s)	58, 470, 1110, 1210, 1429, 1744
BveI	ACCTGC	1 cut(s)	1555
Cac8I	GCNNGC	6 cut(s)	133, 327, 996, 1104, 1108, 1882
CciI	TCATGA	2 cut(s)	1296, 1924
CfoI	GCGC	3 cut(s)	28, 711, 1842
Cfr13I	GGNCC	1 cut(s)	908
CsiI	ACCWGGT	1 cut(s)	878
Csp6I	GTAC	5 cut(s)	242, 402, 1245, 1268, 1910
CspCI	CAANNNNNGTGG	2 cut(s)	347, 382
CviQI	GTAC	5 cut(s)	242, 402, 1245, 1268, 1910
DdeI	CTNAG	9 cut(s)	170, 200, 692, 969, 1215, 1311, 1404, 1748, 1828
DraI	TTTAAA	1 cut(s)	190
DrdI	GACNNNNNNGTC	1 cut(s)	906
DseDI	GACNNNNNNGTC	1 cut(s)	906
EaeI	YGGCCR	3 cut(s)	129, 553, 1183
Eam1104I	CTCTTC	3 cut(s)	249, 621, 989
EarI	CTCTTC	3 cut(s)	249, 621, 989
Eco130I	CCWWGG	4 cut(s)	675, 716, 1186, 1822
Eco31I	GGTCTC	2 cut(s)	745, 1634
Eco47I	GGWCC	1 cut(s)	908
Eco57I	CTGAAG	3 cut(s)	270, 1262, 1967
Eco88I	CYCGRG	1 cut(s)	1094
Eco91I	GGTNACC	1 cut(s)	369
EcoNI	CCTNNNNNAGG	1 cut(s)	618
EcoO65I	GGTNACC	1 cut(s)	369
EcoRII	CCWGG	2 cut(s)	619, 878
EcoT14I	CCWWGG	4 cut(s)	675, 716, 1186, 1822
EcoT22I	ATGCAT	1 cut(s)	1801
ErhI	CCWWGG	4 cut(s)	675, 716, 1186, 1822
FalI	AAGNNNNNCTT	2 cut(s)	1716, 1748
FaqI	GGGAC	2 cut(s)	1701, 1758
FauNDI	CATATG	1 cut(s)	295
FbaI	TGATCA	2 cut(s)	604, 1741
FblI	GTMKAC	2 cut(s)	898, 979
Fnu4HI	GCNGC	6 cut(s)	210, 356, 791, 1146, 1598, 1601
FokI	GGATG	4 cut(s)	563, 614, 658, 1919
Fsp4HI	GCNGC	6 cut(s)	210, 356, 791, 1146, 1598, 1601
FspAI	RTGCGCAY	1 cut(s)	710
FspBI	CTAG	4 cut(s)	140, 581, 753, 1200
FspI	TGCGCA	1 cut(s)	710
GlaI	GCGC	3 cut(s)	27, 710, 1841
GluI	GCNGC	6 cut(s)	210, 356, 791, 1146, 1598, 1601
HaeII	RGCGCY	1 cut(s)	1843
HaeIII	GGCC	3 cut(s)	131, 555, 1185
HapII	CCGG	1 cut(s)	1704
HhaI	GCGC	3 cut(s)	28, 711, 1842
Hin6I	GCGC	3 cut(s)	26, 709, 1840
HinP1I	GCGC	3 cut(s)	26, 709, 1840
HincII	GTYRAC	1 cut(s)	899
HindII	GTYRAC	1 cut(s)	899
HindIII	AAGCTT	1 cut(s)	1766
HpaII	CCGG	1 cut(s)	1704
HphI	GGTGA	3 cut(s)	647, 1521, 1700
Hpy166II	GTNNAC	4 cut(s)	500, 899, 980, 1208
Hpy188I	TCNGA	7 cut(s)	109, 114, 201, 250, 594, 1488, 1522
Hpy188III	TCNNGA	4 cut(s)	1214, 1297, 1750, 1925
Hpy8I	GTNNAC	4 cut(s)	500, 899, 980, 1208
Hpy99I	CGWCG	1 cut(s)	900
HpyAV	CCTTC	5 cut(s)	61, 106, 172, 1247, 1607
HpyCH4III	ACNGT	4 cut(s)	48, 631, 1661, 1850
HpyCH4IV	ACGT	1 cut(s)	780
HpyF10VI	GCNNNNNNNGC	4 cut(s)	141, 1112, 1366, 1445
HpyF3I	CTNAG	9 cut(s)	170, 200, 692, 969, 1215, 1311, 1404, 1748, 1828
HpySE526I	ACGT	1 cut(s)	780
HspAI	GCGC	3 cut(s)	26, 709, 1840
Ksp22I	TGATCA	2 cut(s)	604, 1741
LmnI	GCTCC	8 cut(s)	36, 352, 437, 594, 662, 803, 1366, 1962
Lsp1109I	GCAGC	6 cut(s)	221, 367, 802, 1132, 1584, 1612
LweI	GCATC	3 cut(s)	269, 1719, 1786
MabI	ACCWGGT	1 cut(s)	878
MaeI	CTAG	4 cut(s)	140, 581, 753, 1200
MaeII	ACGT	1 cut(s)	780
MaeIII	GTNAC	4 cut(s)	369, 625, 748, 1190
MbiI	CCGCTC	1 cut(s)	1894
MboII	GAAGA	9 cut(s)	263, 266, 608, 834, 976, 1131, 1172, 1268, 1312
MfeI	CAATTG	1 cut(s)	1634
MflI	RGATCY	1 cut(s)	1888
MhlI	GDGCHC	1 cut(s)	199
MlsI	TGGCCA	3 cut(s)	131, 555, 1185
MluNI	TGGCCA	3 cut(s)	131, 555, 1185
MlyI	GAGTC	4 cut(s)	117, 961, 975, 1762
MmeI	TCCRAC	2 cut(s)	801, 1047
Mox20I	TGGCCA	3 cut(s)	131, 555, 1185
Mph1103I	ATGCAT	1 cut(s)	1801
MscI	TGGCCA	3 cut(s)	131, 555, 1185
MseI	TTAA	3 cut(s)	189, 333, 1803
MslI	CAYNNNNRTG	1 cut(s)	1686
Msp20I	TGGCCA	3 cut(s)	131, 555, 1185
MspI	CCGG	1 cut(s)	1704
MspR9I	CCNGG	2 cut(s)	621, 880
MunI	CAATTG	1 cut(s)	1634
Mva1269I	GAATGC	2 cut(s)	665, 711
MvaI	CCWGG	2 cut(s)	621, 880
MwoI	GCNNNNNNNGC	4 cut(s)	141, 1112, 1366, 1445
NcoI	CCATGG	2 cut(s)	675, 1186
NdeI	CATATG	1 cut(s)	295
NlaIV	GGNNCC	1 cut(s)	433
NmuCI	GTSAC	1 cut(s)	748
NsbI	TGCGCA	1 cut(s)	710
NsiI	ATGCAT	1 cut(s)	1801
NspI	RCATGY	5 cut(s)	391, 524, 1106, 1364, 1884
PaeI	GCATGC	2 cut(s)	1106, 1884
PagI	TCATGA	2 cut(s)	1296, 1924
PciI	ACATGT	1 cut(s)	520
PcsI	WCGNNNNNNNCGW	3 cut(s)	118, 123, 132
PctI	GAATGC	2 cut(s)	665, 711
PfeI	GAWTC	6 cut(s)	696, 721, 773, 839, 1666, 1901
PflMI	CCANNNNNTGG	1 cut(s)	1066
PkrI	GCNGC	6 cut(s)	211, 357, 792, 1147, 1599, 1602
PleI	GAGTC	4 cut(s)	117, 961, 975, 1761
PpsI	GAGTC	4 cut(s)	117, 961, 975, 1761
PscI	ACATGT	1 cut(s)	520
PshAI	GACNNNNGTC	1 cut(s)	950
Psp1406I	AACGTT	1 cut(s)	780
Psp6I	CCWGG	2 cut(s)	619, 878
PspEI	GGTNACC	1 cut(s)	369
PspGI	CCWGG	2 cut(s)	619, 878
PspN4I	GGNNCC	1 cut(s)	433
PspPI	GGNCC	1 cut(s)	908
PstI	CTGCAG	2 cut(s)	1552, 1602
PsuI	RGATCY	1 cut(s)	1888
RsaI	GTAC	5 cut(s)	243, 403, 1246, 1269, 1911
RsaNI	GTAC	5 cut(s)	242, 402, 1245, 1268, 1910
RseI	CAYNNNNRTG	1 cut(s)	1686
SalI	GTCGAC	1 cut(s)	897
SaqAI	TTAA	3 cut(s)	189, 333, 1803
SatI	GCNGC	6 cut(s)	210, 356, 791, 1146, 1598, 1601
Sau96I	GGNCC	1 cut(s)	908
SchI	GAGTC	4 cut(s)	117, 961, 975, 1762
ScrFI	CCNGG	2 cut(s)	621, 880
SduI	GDGCHC	1 cut(s)	199
SexAI	ACCWGGT	1 cut(s)	878
SfaNI	GCATC	3 cut(s)	269, 1719, 1786
SfcI	CTRYAG	3 cut(s)	345, 1548, 1598
SinI	GGWCC	1 cut(s)	908
SmiMI	CAYNNNNRTG	1 cut(s)	1686
SmlI	CTYRAG	3 cut(s)	478, 744, 1433
SmoI	CTYRAG	3 cut(s)	478, 744, 1433
SphI	GCATGC	2 cut(s)	1106, 1884
SsiI	CCGC	1 cut(s)	1892
SspMI	CTAG	4 cut(s)	140, 581, 753, 1200
StyD4I	CCNGG	2 cut(s)	619, 878
StyI	CCWWGG	4 cut(s)	675, 716, 1186, 1822
TaaI	ACNGT	4 cut(s)	48, 631, 1661, 1850
TaiI	ACGT	1 cut(s)	783
TaqI	TCGA	4 cut(s)	121, 699, 898, 1168
TatI	WGTACW	3 cut(s)	241, 1244, 1267
TfiI	GAWTC	6 cut(s)	696, 721, 773, 839, 1666, 1901
Tru1I	TTAA	3 cut(s)	189, 333, 1803
Tru9I	TTAA	3 cut(s)	189, 333, 1803
TscAI	CASTG	6 cut(s)	58, 477, 1117, 1210, 1429, 1744
TseFI	GTSAC	1 cut(s)	748
TseI	GCWGC	6 cut(s)	209, 355, 790, 1145, 1597, 1600
Tsp45I	GTSAC	1 cut(s)	748
TspDTI	ATGAA	8 cut(s)	80, 300, 442, 560, 662, 1313, 1576, 1941
TspGWI	ACGGA	1 cut(s)	563
TspRI	CASTG	6 cut(s)	58, 477, 1117, 1210, 1429, 1744
Van91I	CCANNNNNTGG	1 cut(s)	1066
VpaK11BI	GGWCC	1 cut(s)	908
XagI	CCTNNNNNAGG	1 cut(s)	618
XapI	RAATTY	3 cut(s)	588, 650, 1016
XceI	RCATGY	5 cut(s)	391, 524, 1106, 1364, 1884
XmiI	GTMKAC	2 cut(s)	898, 979
XspI	CTAG	4 cut(s)	140, 581, 753, 1200
Zsp2I	ATGCAT	1 cut(s)	1801

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.