Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0003378

Physical Location & Seq

Genomic Coordinates Reverse (-)

23300063 .. 23303069

Gene Structure 3007 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000023414

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1950 bp

ATGCCATTTCAAAGGCTCTGTCATCCAAGAATGTATTTTTTGCTGCATTGGCCTCCTAGAATAGGCAAAACCACAACTGTGGTGGAAATTGTATTGCAAGAAGTCAAACGTGGATCAAAGATCCTTGCATGTGCTGCTTCCAATATTGCTGTTGACAACATTGTTGAGCGACTAGCACGCCAAAGGGGAGTGGTAGGGTTAGCCAGCGATCCAGGCTTTAGAAAGGACAACAGAGCTGTGCTAAGCAGGAAGGATTTGTTTAAAAGTGCTCTAAGAAAAGCAGCTTATGTGTGGAAAAGGATCAATGAGCTGGCACTTTCTGAAGAAGAGGCATCATGGTTGAGGTTCTATGTTGATGAATTAGCATATGCTTATTTGCATTGGACAATGTTTGTGCCTGCTATTAAAGGGTCTGCTACAGAGGAGCAGCAACAAAAGTGGTTACCTTTGGCAAACAACATGCAGATAATCGGTACTTACGCACAAACTGAACTTGGTCGTGGCTCCAATGTTAGAGGCCGTGAGATAACCACGACTTTTGACCAGGAGACAGATGAGTTCATCATCCATAGTCCTACACTGACCTCAAGCAAATTGTGGGCGGGTGGACTGGGAAAGGTTGCTACACATGTTGTTGTTTATGCCCAGCTTATTACGGATAGCCAAGATTATGGAGTTCATGGTTTCCTAGTCCAAATTCGGAGCTTGGATGATCACTTTCCTCTTCCAGGTGTTACAGTTGGTGATATTGGGATGAAATTTGGAAGTGGAGCATTCAATTCCATGGACAATGGTTTCCTTAGATTCGATCATGTGCGCATTCCAAGGAATCAAATGCTGATAAGGGTCTATCAAGTCACTAGACAAGGAAAGTATGTAGAATCCAATGTTCCAAAGAAACTAATTTATGGAGCTATGGTTTATGTGAGACAAACCATGGTAGCTGATTCTTCCATTTTTTTGTCAAGAGCAGTATGTATTGCTACCAGATTTGTTAGCGAGTGGTTGAAATGGCTATACAGAGATTTGATCCAAAAGTTGGAAGCAAACGATTTCTCTACACTCCTCGAGGCGCATGTCTGCACTGCTGGTTTGAAGTCCTTTACTACTTCTACTGCTGCTGATGGCATTGAAGAATGTCGAAAGCTATGTGGTGGCCATGGTTACTTGTCTAGCAGTGGACTTCCTGAGTTATATGCTTCTTTTGTCCCTGCTTGTACTTACGAAGGAGATAACATTGTACTGCTTCTACAGGTTTCAAGGTTTCTCATGAAGACCATTTCTCAGTTGCAGACAGGGAAAAAGCCTATTAGAACTACGGCTTATATGGGGCATGTGGAGCATTTGATCCAATCTCGTTGTAAGGTTCAAAAAGCTGAGGATTGGTTGAACCCCAGTGTAATACTTGAGGCATTTGGAGCAAGGGCTATTAGATTGTCGGTTGCTTGTGCCGAAAATCTGACCAAGTTTGCCACTCCATCACAAGGCTTTTCACAACTCTCACCTGATTTAGTTGAAGCTGCAGTTGCTCATTGCCAACTAATTTTGGTTTCCAAGTTCATTGAGAAGCTGCAACAAAACATTGAAGGAAATGGAGTGAAACAACAATTGGAGACACTCTGCAACATTTACTATTTGAATCTTATTCACAAACATCTGGGTGATTTTTTGTCCACTGGAAGCATAAGTCCCAAGCCAGCTTCACTTGCCAGTGTTCAACTCAGGAGTCTGTATTCCAAGCTTCGTTCCAATATTATTGCCCTTGTAGATGCATTTATTTACACATATCATTTCCTTAGCTCAGTTCTTGGGCGCTATGACGGTAATGTGTATCCAAAGCTCTATGAGGAAGCATGGAAAGATCCGCTCAATGATTTTATTGTACCTGATGGGTATCATGAATACATCCAGCCAGTGCTGAAGCAACAGGTCCAAAATGCAAGGCTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0001676 GO:0003674 GO:0003824 GO:0003995 GO:0003997 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0005911 GO:0006082 GO:0006629 GO:0006631 GO:0006635 GO:0006950 GO:0008150 GO:0008152 GO:0009056 GO:0009058 GO:0009062 GO:0009506 GO:0009605 GO:0009607 GO:0009611 GO:0009620 GO:0009694 GO:0009695 GO:0009987 GO:0010035 GO:0010038 GO:0010817 GO:0016042 GO:0016053 GO:0016054 GO:0016491 GO:0016627 GO:0016634 GO:0019395 GO:0019752 GO:0030054 GO:0030258 GO:0032787 GO:0033539 GO:0034440 GO:0036094 GO:0042221 GO:0042445 GO:0042446 GO:0042579 GO:0043167 GO:0043168 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044249 GO:0044255 GO:0044281 GO:0044282 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0046395 GO:0046686 GO:0048037 GO:0050660 GO:0050662 GO:0050896 GO:0051704 GO:0051707 GO:0055044 GO:0055114 GO:0065007 GO:0065008 GO:0071704 GO:0072329 GO:0072330 GO:0097159 GO:1901265 GO:1901363 GO:1901575 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00071 ko00592 ko01040 ko01100 ko01110 ko01212 ko03320 ko04024 ko04146 map00071 map00592 map01040 map01100 map01110 map01212 map03320 map04024 map04146

Pfam Domains

Protein Families

ACOX Acyl-CoA_dh_M Acyl-CoA_ox_N

Protein Analysis

650

Amino Acids

73.04

Weight (kDa)

8.93

Isoelectric Point (pI)

44.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA_11	PF13086	11 - 60	5.4e-12	AAA domain
Acyl-CoA_ox_N	PF14749	67 - 157	2.3e-22	Acyl-coenzyme A oxidase N-terminal
ACOX_C_alpha1	PF22924	331 - 424	3.2e-31	Acyl-CoA oxidase, C-alpha1 domain
ACOX	PF01756	464 - 641	3.1e-49	Acyl-CoA oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003378)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G35690 AT4G16760 AT4G16760
fragaria_vesca	FvH4_5g19470
malus_domestica	MD04G1060500.v1.1 MD13G1127300.v1.1
prunus_persica	Prupe.5G065100_v2.0.a1 Prupe.7G067100_v2.0.a1
pyrus_communis	pycom04g05410 pycom13g11040
rosa_chinensis	RchiOBHm_Chr3g0481201 RchiOBHm_Chr3g0481221 RchiOBHm_Chr7g0204041
rosa_laevigata	RLG00000003492 RLG00000023411 RLG00000023414 RLG00000023415
rosa_multiflora	Rmu_sc0000064.1_g000003 Rmu_sc0001311.1_g000009 Rmu_sc0001551.1_g000009 Rmu_sc0001843.1_g000010 Rmu_sc0009910.1_g000005
rosa_roxburghii	Rroxscaffold_3G00253400 Rroxscaffold_6G00400590
rosa_rugosa	Rorug03G0190400 Rorug07G0080100 Rorug07G0080200
rosa_samantha	Rh3AG241300 Rh3BG276600 Rh3DG268000 Rh7AG210200 Rh7BG208600
rosa_wichuraiana	Rw3G021520 Rw3G021530 Rw3G021550 Rw7G018300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AbsI	CCTCGAGG	1 cut(s)	1067
Acc16I	TGCGCA	1 cut(s)	818
AccB7I	CCANNNNNTGG	1 cut(s)	1039
AccBSI	CCGCTC	1 cut(s)	1867
AciI	CCGC	2 cut(s)	602, 1865
AclWI	GGATC	7 cut(s)	115, 121, 203, 308, 1024, 1342, 1856
AcoI	YGGCCR	1 cut(s)	1156
AcsI	RAATTY	2 cut(s)	696, 758
AcuI	CTGAAG	2 cut(s)	342, 1940
AfaI	GTAC	4 cut(s)	475, 1219, 1242, 1884
AfiI	CCNNNNNNNGG	4 cut(s)	62, 728, 1039, 1484
AflIII	ACRYGT	1 cut(s)	628
AjnI	CCWGG	3 cut(s)	211, 543, 727
AjuI	GAANNNNNNNTTGG	2 cut(s)	1592, 1624
AleI	CACNNNNGTG	1 cut(s)	77
Alw21I	GWGCWC	1 cut(s)	271
Alw26I	GTCTC	3 cut(s)	542, 922, 1607
AlwI	GGATC	7 cut(s)	115, 121, 203, 308, 1024, 1342, 1856
Ama87I	CYCGRG	1 cut(s)	1067
AoxI	GGCC	3 cut(s)	50, 517, 1156
ApeKI	GCWGC	7 cut(s)	43, 134, 281, 427, 1118, 1520, 1570
ApoI	RAATTY	2 cut(s)	696, 758
ArsI	GACNNNNNNTTYG	1 cut(s)	36
AspLEI	GCGC	3 cut(s)	819, 1075, 1815
AspS9I	GGNCC	1 cut(s)	1930
AsuHPI	GGTGA	3 cut(s)	755, 1494, 1673
AvaI	CYCGRG	1 cut(s)	1067
AvaII	GGWCC	1 cut(s)	1930
BalI	TGGCCA	1 cut(s)	1158
BbsI	GAAGAC	1 cut(s)	1280
Bbv12I	GWGCWC	1 cut(s)	271
BbvCI	CCTCAGC	1 cut(s)	1377
BbvI	GCAGC	7 cut(s)	30, 121, 293, 439, 1105, 1507, 1557
BccI	CCATC	3 cut(s)	1118, 1486, 1883
BceAI	ACGGC	2 cut(s)	504, 1335
BciT130I	CCWGG	3 cut(s)	213, 545, 729
BciVI	GTATCC	1 cut(s)	1842
BclI	TGATCA	1 cut(s)	712
BcoDI	GTCTC	3 cut(s)	542, 922, 1607
BfaI	CTAG	5 cut(s)	57, 173, 689, 861, 1173
BfmI	CTRYAG	3 cut(s)	417, 1250, 1521
BfoI	RGCGCY	1 cut(s)	1816
BfuI	GTATCC	1 cut(s)	1842
BisI	GCNGC	7 cut(s)	44, 135, 282, 428, 1119, 1521, 1571
BlpI	GCTNAGC	1 cut(s)	242
BlsI	GCNGC	7 cut(s)	45, 136, 283, 429, 1120, 1522, 1572
Bme1390I	CCNGG	3 cut(s)	213, 545, 729
Bme18I	GGWCC	1 cut(s)	1930
BmeT110I	CYCGRG	1 cut(s)	1067
BmgT120I	GGNCC	1 cut(s)	1930
BmiI	GGNNCC	1 cut(s)	505
BmrFI	CCNGG	3 cut(s)	213, 545, 729
BmrI	ACTGGG	2 cut(s)	620, 1389
BmsI	GCATC	2 cut(s)	341, 1759
BmuI	ACTGGG	2 cut(s)	620, 1389
BpiI	GAAGAC	1 cut(s)	1280
Bpu10I	CCTNAGC	2 cut(s)	1377, 1796
Bpu1102I	GCTNAGC	1 cut(s)	242
BpuEI	CTTGAG	2 cut(s)	571, 1427
BsaBI	GATNNNNATC	1 cut(s)	1893
BsaJI	CCNNGG	4 cut(s)	783, 824, 936, 1159
BsaXI	ACNNNNNCTCC	2 cut(s)	903, 933
Bsc4I	CCNNNNNNNGG	4 cut(s)	62, 728, 1039, 1484
Bse1I	ACTGG	5 cut(s)	615, 1395, 1681, 1710, 1913
Bse3DI	GCAATG	1 cut(s)	1531
Bse8I	GATNNNNATC	1 cut(s)	1893
BseBI	CCWGG	3 cut(s)	213, 545, 729
BseDI	CCNNGG	4 cut(s)	783, 824, 936, 1159
BseGI	GGATG	5 cut(s)	22, 564, 715, 759, 1905
BseJI	GATNNNNATC	1 cut(s)	1893
BseLI	CCNNNNNNNGG	4 cut(s)	62, 728, 1039, 1484
BseMI	GCAATG	1 cut(s)	1531
BseMII	CTCAG	5 cut(s)	1179, 1298, 1368, 1735, 1815
BseNI	ACTGG	5 cut(s)	615, 1395, 1681, 1710, 1913
BseRI	GAGGAG	2 cut(s)	437, 1055
BseXI	GCAGC	7 cut(s)	30, 121, 293, 439, 1105, 1507, 1557
BseYI	CCCAGC	1 cut(s)	645
BsgI	GTGCAG	1 cut(s)	1066
BshFI	GGCC	3 cut(s)	52, 519, 1158
BsiHKAI	GWGCWC	1 cut(s)	271
BsiHKCI	CYCGRG	1 cut(s)	1067
BslFI	GGGAC	2 cut(s)	1193, 1674
BslI	CCNNNNNNNGG	4 cut(s)	62, 728, 1039, 1484
BsmAI	GTCTC	3 cut(s)	542, 922, 1607
BsmFI	GGGAC	2 cut(s)	1193, 1674
BsmI	GAATGC	2 cut(s)	773, 819
BsnI	GGCC	3 cut(s)	52, 519, 1158
BsoBI	CYCGRG	1 cut(s)	1067
Bsp1286I	GDGCHC	1 cut(s)	271
Bsp143I	GATC	9 cut(s)	113, 120, 208, 300, 712, 808, 1029, 1347, 1861
Bsp1720I	GCTNAGC	1 cut(s)	242
Bsp19I	CCATGG	3 cut(s)	783, 936, 1159
BspACI	CCGC	2 cut(s)	602, 1865
BspANI	GGCC	3 cut(s)	52, 519, 1158
BspCNI	CTCAG	5 cut(s)	1180, 1297, 1369, 1734, 1814
BspHI	TCATGA	2 cut(s)	1269, 1897
BspLI	GGNNCC	1 cut(s)	505
BspMAI	CTGCAG	1 cut(s)	1525
BspPI	GGATC	7 cut(s)	115, 121, 203, 308, 1024, 1342, 1856
BsrBI	CCGCTC	1 cut(s)	1867
BsrDI	GCAATG	1 cut(s)	1531
BsrI	ACTGG	5 cut(s)	615, 1395, 1681, 1710, 1913
BssECI	CCNNGG	4 cut(s)	783, 824, 936, 1159
BssMI	GATC	9 cut(s)	113, 120, 208, 300, 712, 808, 1029, 1347, 1861
BssT1I	CCWWGG	4 cut(s)	783, 824, 936, 1159
Bst2UI	CCWGG	3 cut(s)	213, 545, 729
Bst4CI	ACNGT	3 cut(s)	79, 739, 1823
Bst6I	CTCTTC	2 cut(s)	321, 729
BstAPI	GCANNNNNTGC	1 cut(s)	134
BstC8I	GCNNGC	5 cut(s)	178, 205, 312, 399, 1698
BstDEI	CTNAG	9 cut(s)	242, 272, 800, 1188, 1284, 1377, 1721, 1796, 1801
BstDSI	CCRYGG	3 cut(s)	783, 936, 1159
BstEII	GGTNACC	1 cut(s)	441
BstENI	CCTNNNNNAGG	2 cut(s)	60, 726
BstF5I	GGATG	5 cut(s)	22, 564, 715, 759, 1905
BstH2I	RGCGCY	1 cut(s)	1816
BstHHI	GCGC	3 cut(s)	819, 1075, 1815
BstKTI	GATC	9 cut(s)	116, 123, 211, 303, 715, 811, 1032, 1350, 1864
BstMAI	GTCTC	3 cut(s)	542, 922, 1607
BstMBI	GATC	9 cut(s)	113, 120, 208, 300, 712, 808, 1029, 1347, 1861
BstMWI	GCNNNNNNNGC	7 cut(s)	49, 134, 213, 1339, 1418, 1526, 1706
BstNI	CCWGG	3 cut(s)	213, 545, 729
BstNSI	RCATGY	5 cut(s)	132, 463, 632, 1079, 1337
BstPI	GGTNACC	1 cut(s)	441
BstSCI	CCNGG	3 cut(s)	211, 543, 727
BstSFI	CTRYAG	3 cut(s)	417, 1250, 1521
BstV1I	GCAGC	7 cut(s)	30, 121, 293, 439, 1105, 1507, 1557
BstV2I	GAAGAC	1 cut(s)	1280
BstX2I	RGATCY	2 cut(s)	120, 1861
BstXI	CCANNNNNNTGG	2 cut(s)	79, 671
BstYI	RGATCY	2 cut(s)	120, 1861
BsuI	GTATCC	1 cut(s)	1842
BsuRI	GGCC	3 cut(s)	52, 519, 1158
BtgI	CCRYGG	3 cut(s)	783, 936, 1159
BtsCI	GGATG	5 cut(s)	22, 564, 715, 759, 1905
BtsI	GCAGTG	2 cut(s)	1083, 1183
BtsIMutI	CAGTG	7 cut(s)	578, 1083, 1183, 1402, 1674, 1717, 1920
Cac8I	GCNNGC	5 cut(s)	178, 205, 312, 399, 1698
CciI	TCATGA	2 cut(s)	1269, 1897
CfoI	GCGC	3 cut(s)	819, 1075, 1815
Cfr13I	GGNCC	1 cut(s)	1930
Csp6I	GTAC	4 cut(s)	474, 1218, 1241, 1883
CspCI	CAANNNNNGTGG	6 cut(s)	63, 98, 419, 454, 520, 555
CviQI	GTAC	4 cut(s)	474, 1218, 1241, 1883
DdeI	CTNAG	9 cut(s)	242, 272, 800, 1188, 1284, 1377, 1721, 1796, 1801
DpnI	GATC	9 cut(s)	115, 122, 210, 302, 714, 810, 1031, 1349, 1863
DpnII	GATC	9 cut(s)	113, 120, 208, 300, 712, 808, 1029, 1347, 1861
DraI	TTTAAA	1 cut(s)	262
EaeI	YGGCCR	1 cut(s)	1156
Eam1104I	CTCTTC	2 cut(s)	321, 729
EarI	CTCTTC	2 cut(s)	321, 729
Eco130I	CCWWGG	4 cut(s)	783, 824, 936, 1159
Eco47I	GGWCC	1 cut(s)	1930
Eco57I	CTGAAG	2 cut(s)	342, 1940
Eco88I	CYCGRG	1 cut(s)	1067
Eco91I	GGTNACC	1 cut(s)	441
EcoNI	CCTNNNNNAGG	2 cut(s)	60, 726
EcoO65I	GGTNACC	1 cut(s)	441
EcoRII	CCWGG	3 cut(s)	211, 543, 727
EcoT14I	CCWWGG	4 cut(s)	783, 824, 936, 1159
EcoT22I	ATGCAT	1 cut(s)	1774
ErhI	CCWWGG	4 cut(s)	783, 824, 936, 1159
FaqI	GGGAC	2 cut(s)	1193, 1674
FauI	CCCGC	1 cut(s)	595
FauNDI	CATATG	1 cut(s)	367
FbaI	TGATCA	1 cut(s)	712
Fnu4HI	GCNGC	7 cut(s)	44, 135, 282, 428, 1119, 1521, 1571
FokI	GGATG	5 cut(s)	9, 551, 722, 766, 1892
Fsp4HI	GCNGC	7 cut(s)	44, 135, 282, 428, 1119, 1521, 1571
FspAI	RTGCGCAY	1 cut(s)	818
FspBI	CTAG	5 cut(s)	57, 173, 689, 861, 1173
FspI	TGCGCA	1 cut(s)	818
GlaI	GCGC	3 cut(s)	818, 1074, 1814
GluI	GCNGC	7 cut(s)	44, 135, 282, 428, 1119, 1521, 1571
GsaI	CCCAGC	1 cut(s)	649
HaeII	RGCGCY	1 cut(s)	1816
HaeIII	GGCC	3 cut(s)	52, 519, 1158
HhaI	GCGC	3 cut(s)	819, 1075, 1815
Hin6I	GCGC	3 cut(s)	817, 1073, 1813
HinP1I	GCGC	3 cut(s)	817, 1073, 1813
HincII	GTYRAC	1 cut(s)	154
HindII	GTYRAC	1 cut(s)	154
HindIII	AAGCTT	1 cut(s)	1739
HinfI	GANTC	6 cut(s)	804, 829, 881, 947, 1639, 1726
HphI	GGTGA	3 cut(s)	755, 1494, 1673
Hpy166II	GTNNAC	4 cut(s)	154, 608, 1181, 1674
Hpy188I	TCNGA	3 cut(s)	322, 702, 1461
Hpy188III	TCNNGA	5 cut(s)	966, 1187, 1270, 1723, 1898
Hpy8I	GTNNAC	4 cut(s)	154, 608, 1181, 1674
HpyAV	CCTTC	3 cut(s)	244, 1220, 1580
HpyCH4III	ACNGT	3 cut(s)	79, 739, 1823
HpyCH4IV	ACGT	1 cut(s)	109
HpyF10VI	GCNNNNNNNGC	7 cut(s)	49, 134, 213, 1339, 1418, 1526, 1706
HpyF3I	CTNAG	9 cut(s)	242, 272, 800, 1188, 1284, 1377, 1721, 1796, 1801
HpySE526I	ACGT	1 cut(s)	109
HspAI	GCGC	3 cut(s)	817, 1073, 1813
Ksp22I	TGATCA	1 cut(s)	712
Kzo9I	GATC	9 cut(s)	113, 120, 208, 300, 712, 808, 1029, 1347, 1861
LmnI	GCTCC	7 cut(s)	424, 509, 702, 770, 911, 1339, 1418
Lsp1109I	GCAGC	7 cut(s)	30, 121, 293, 439, 1105, 1507, 1557
LweI	GCATC	2 cut(s)	341, 1759
MaeI	CTAG	5 cut(s)	57, 173, 689, 861, 1173
MaeII	ACGT	1 cut(s)	109
MaeIII	GTNAC	4 cut(s)	441, 733, 856, 1163
MalI	GATC	9 cut(s)	115, 122, 210, 302, 714, 810, 1031, 1349, 1863
MbiI	CCGCTC	1 cut(s)	1867
MboI	GATC	9 cut(s)	113, 120, 208, 300, 712, 808, 1029, 1347, 1861
MboII	GAAGA	6 cut(s)	335, 338, 716, 942, 1145, 1285
MfeI	CAATTG	1 cut(s)	1607
MflI	RGATCY	2 cut(s)	120, 1861
MhlI	GDGCHC	1 cut(s)	271
MlsI	TGGCCA	1 cut(s)	1158
MluCI	AATT	9 cut(s)	87, 359, 593, 696, 758, 778, 903, 1542, 1607
MluNI	TGGCCA	1 cut(s)	1158
MlyI	GAGTC	1 cut(s)	1735
MmeI	TCCRAC	1 cut(s)	1020
Mox20I	TGGCCA	1 cut(s)	1158
Mph1103I	ATGCAT	1 cut(s)	1774
MscI	TGGCCA	1 cut(s)	1158
MseI	TTAA	2 cut(s)	261, 405
MslI	CAYNNNNRTG	2 cut(s)	77, 1659
Msp20I	TGGCCA	1 cut(s)	1158
MspR9I	CCNGG	3 cut(s)	213, 545, 729
MunI	CAATTG	1 cut(s)	1607
Mva1269I	GAATGC	2 cut(s)	773, 819
MvaI	CCWGG	3 cut(s)	213, 545, 729
MwoI	GCNNNNNNNGC	7 cut(s)	49, 134, 213, 1339, 1418, 1526, 1706
NcoI	CCATGG	3 cut(s)	783, 936, 1159
NdeI	CATATG	1 cut(s)	367
NdeII	GATC	9 cut(s)	113, 120, 208, 300, 712, 808, 1029, 1347, 1861
NlaIV	GGNNCC	1 cut(s)	505
NmuCI	GTSAC	1 cut(s)	856
NsbI	TGCGCA	1 cut(s)	818
NsiI	ATGCAT	1 cut(s)	1774
NspI	RCATGY	5 cut(s)	132, 463, 632, 1079, 1337
OliI	CACNNNNGTG	1 cut(s)	77
PaeR7I	CTCGAG	1 cut(s)	1067
PagI	TCATGA	2 cut(s)	1269, 1897
PciI	ACATGT	1 cut(s)	628
PctI	GAATGC	2 cut(s)	773, 819
PfeI	GAWTC	5 cut(s)	804, 829, 881, 947, 1639
PflMI	CCANNNNNTGG	1 cut(s)	1039
PkrI	GCNGC	7 cut(s)	45, 136, 283, 429, 1120, 1522, 1572
PleI	GAGTC	1 cut(s)	1734
PpsI	GAGTC	1 cut(s)	1734
PscI	ACATGT	1 cut(s)	628
Psp6I	CCWGG	3 cut(s)	211, 543, 727
PspEI	GGTNACC	1 cut(s)	441
PspFI	CCCAGC	1 cut(s)	645
PspGI	CCWGG	3 cut(s)	211, 543, 727
PspN4I	GGNNCC	1 cut(s)	505
PspPI	GGNCC	1 cut(s)	1930
PspXI	VCTCGAGB	1 cut(s)	1067
PstI	CTGCAG	1 cut(s)	1525
PsuI	RGATCY	2 cut(s)	120, 1861
RsaI	GTAC	4 cut(s)	475, 1219, 1242, 1884
RsaNI	GTAC	4 cut(s)	474, 1218, 1241, 1883
RseI	CAYNNNNRTG	2 cut(s)	77, 1659
SaqAI	TTAA	2 cut(s)	261, 405
SatI	GCNGC	7 cut(s)	44, 135, 282, 428, 1119, 1521, 1571
Sau3AI	GATC	9 cut(s)	113, 120, 208, 300, 712, 808, 1029, 1347, 1861
Sau96I	GGNCC	1 cut(s)	1930
SchI	GAGTC	1 cut(s)	1735
ScrFI	CCNGG	3 cut(s)	213, 545, 729
SduI	GDGCHC	1 cut(s)	271
SfaNI	GCATC	2 cut(s)	341, 1759
SfcI	CTRYAG	3 cut(s)	417, 1250, 1521
Sfr274I	CTCGAG	1 cut(s)	1067
SinI	GGWCC	1 cut(s)	1930
SlaI	CTCGAG	1 cut(s)	1067
SmiMI	CAYNNNNRTG	2 cut(s)	77, 1659
SmlI	CTYRAG	3 cut(s)	586, 1067, 1406
SmoI	CTYRAG	3 cut(s)	586, 1067, 1406
Sse9I	AATT	9 cut(s)	87, 359, 593, 696, 758, 778, 903, 1542, 1607
SsiI	CCGC	2 cut(s)	602, 1865
SspI	AATATT	2 cut(s)	145, 1753
SspMI	CTAG	5 cut(s)	57, 173, 689, 861, 1173
StyD4I	CCNGG	3 cut(s)	211, 543, 727
StyI	CCWWGG	4 cut(s)	783, 824, 936, 1159
TaaI	ACNGT	3 cut(s)	79, 739, 1823
TaiI	ACGT	1 cut(s)	112
TaqI	TCGA	3 cut(s)	807, 1068, 1141
TasI	AATT	9 cut(s)	87, 359, 593, 696, 758, 778, 903, 1542, 1607
TatI	WGTACW	2 cut(s)	1217, 1240
TfiI	GAWTC	5 cut(s)	804, 829, 881, 947, 1639
Tru1I	TTAA	2 cut(s)	261, 405
Tru9I	TTAA	2 cut(s)	261, 405
TscAI	CASTG	7 cut(s)	585, 1090, 1183, 1402, 1681, 1717, 1920
TseFI	GTSAC	1 cut(s)	856
TseI	GCWGC	7 cut(s)	43, 134, 281, 427, 1118, 1520, 1570
Tsp45I	GTSAC	1 cut(s)	856
TspDTI	ATGAA	7 cut(s)	372, 550, 668, 770, 1286, 1549, 1914
TspGWI	ACGGA	1 cut(s)	671
TspRI	CASTG	7 cut(s)	585, 1090, 1183, 1402, 1681, 1717, 1920
Van91I	CCANNNNNTGG	1 cut(s)	1039
VpaK11BI	GGWCC	1 cut(s)	1930
XagI	CCTNNNNNAGG	2 cut(s)	60, 726
XapI	RAATTY	2 cut(s)	696, 758
XceI	RCATGY	5 cut(s)	132, 463, 632, 1079, 1337
XcmI	CCANNNNNNNNNTGG	1 cut(s)	79
XhoI	CTCGAG	1 cut(s)	1067
XspI	CTAG	5 cut(s)	57, 173, 689, 861, 1173
Zsp2I	ATGCAT	1 cut(s)	1774

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.