Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0003378

Physical Location & Seq

Genomic Coordinates Forward (+)

27291706 .. 27294158

Gene Structure 2453 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ44619

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2013 bp

ATGGAACGCATAATGGATCATTTGGCGCATGAGAGGAGCAAGGCACAATTCAGTGTCGAGGAGATGAAGATCATCTGGGCTGGTTCTCTCCATGCCTTCCAAGTCTCTGATCGGATCGCTCGACTTGTGGCCAGCGATCCAGGCTTTAGAAAGGACAACAGAGCTGTGCTAAGCAGGAAGGAGTTGTTTAAAAGTGCTCTGAGAAAAGCAGCTTATGTGTGGAAAAGGATCAATGAGCTTGCACTTTCTGAAGAAGAGGCATCATGGTTGAGGTTCTATGTTGATGAATTAGCATATGCTTATATTCATTGGTCAATTTTTGTGCCTGCTATTAAGGGGTCTGCTACTGAGGAGCAGCAACAAAAGTGGTTACCTTTGGCAAACAACATGCAGATAATCGGTACTTATGCACAAACTGAACTTGGTCATGGCTCCAATGTTAGAGGCCTTGAGACAACCGCGACTTTTGACCAGGAGACAGATGAGTTCATCATCCATAGTCCTACACTGACCTCAAGCAAATGGTGGCCTGGTGGACTGGGAAAGGTTGCTACACATGCTGTTGTTTATGCTCGGCTTATTACGGATGGCCAAGATTATGGAGTTCATGGTTTCCTTGTCCAAATTCGGAGCTTGGATGATCACTTTCCTCTTCCAGGTGTTACAGTTGGTGATATTGGGATGAAATTTGGAAGTGGAGCATTCAATTCCATTGACAATGGTTTCCTTAGATTCAATCATGTGCGCATTCCAAGGAATCAAATGCTGATGAGGGTCTCACAAGTCACTAGACAAGGAAAGTATGTAGAATCCAACGTTCCAAAGCAGCTAATTTATGGAGCTATGCTTTATGCGAGACAAACCATCGTAGCTGATGCTTCCATCGCTTTGTCAAGAGCAGTATGTATTGCTACCAGGTACAGTGCTGTTCGTCGACAATTTGGTCGTCCACATGAGGATCAAAATGGTAATGGTGTTGAGACACAGGTCATTGATTACAACACTCAGCAAAGTAGACTCTTCCCTTTGCTGGCTTCTGCCTATGCTTTCAGATTTGTTGGCGAGTGGTTGAAATGGCTATACACAGATTTGATCCAAAAGTTGGAAGCAAACGATTTCTCTACACTGGCCGAGGCGCATGCCTGCACTGCTGGTTTGAAGTCCTTGACTTCTTCCACTGCTGCTGATGGCATCGAAGAATGTCGGAAGCTATGTGGTGGCCATGGTTACTTGTCTAGCAGTGGACTTCCTGAGTTATATGCTGCTTTTGTCCCTGCTTGTACTTATGAAGGAGATAACATTGTACTGCTTCTACAGGTTTCAAGGTTTCTCATGAAGACCATTTCTCAGTTGCAGACTGGGAAAAAGTCTATTGGAACAACAGCTTATATGGGACATGTGGAGCATTTGATCCAATGTCACTGTAAGGTTCAAAAAGCTGAGGATTGGTTGAACCCTAGTGTAATACTTGAGGCATTTGAAGCAAGGGCTATTAGATTGTCGGTTGCTTGTGCCGAAAATCTCACCAAGTTTGCCACTCCATTACAAGGCTTTTCAGAACTCTCACCTGATTTAGTTGAAGCTGCAGTTGCTCATTGCCAACTAATTGTGGTTTCCAAGTTCATTGAGAAGCTGCAGCAAAACATTGAAGGAAATGGAGTGAAACAACAATTGGAGACCCTCTGCAACATTTACTGTTTGAATCTTATTCACAAACATCTGGGTGATTTTCTGTCCACTAGAAGCATCAGTCCCAAGCAAGCTTCACTTGCCAGTGATCAACTCAGGAGTCTCTATTCCAAGCTTCGTCCCAATGTTATTGCCCTTGTTGATGCATTTAATTACACAGATCATTTCCTTGGCTCAGTTCTTGGGCGTTATGACGGTAATGTGTATCCAAAGCTCTATGAGGAAGCATGCAAAGATCCGCTCAATGATTCTATTGTACCTGATGGGTATCATGAATACATCCAGCCTGTGCTGAAGCAACAGCTCCAAAATGCAAGGCTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0001676 GO:0003674 GO:0003824 GO:0003995 GO:0003997 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0005911 GO:0006082 GO:0006629 GO:0006631 GO:0006635 GO:0006950 GO:0008150 GO:0008152 GO:0009056 GO:0009058 GO:0009062 GO:0009506 GO:0009605 GO:0009607 GO:0009611 GO:0009620 GO:0009694 GO:0009695 GO:0009987 GO:0010035 GO:0010038 GO:0010817 GO:0016042 GO:0016053 GO:0016054 GO:0016491 GO:0016627 GO:0016634 GO:0019395 GO:0019752 GO:0030054 GO:0030258 GO:0032787 GO:0033539 GO:0034440 GO:0036094 GO:0042221 GO:0042445 GO:0042446 GO:0042579 GO:0043167 GO:0043168 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044249 GO:0044255 GO:0044281 GO:0044282 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0046395 GO:0046686 GO:0048037 GO:0050660 GO:0050662 GO:0050896 GO:0051704 GO:0051707 GO:0055044 GO:0055114 GO:0065007 GO:0065008 GO:0071704 GO:0072329 GO:0072330 GO:0097159 GO:1901265 GO:1901363 GO:1901575 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00071 ko00592 ko01040 ko01100 ko01110 ko01212 ko03320 ko04024 ko04146 map00071 map00592 map01040 map01100 map01110 map01212 map03320 map04024 map04146

Pfam Domains

Protein Families

ACOX Acyl-CoA_dh_M Acyl-CoA_ox_N

Protein Analysis

670

Amino Acids

75.04

Weight (kDa)

7.06

Isoelectric Point (pI)

42.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Acyl-CoA_ox_N	PF14749	18 - 133	3.3e-27	Acyl-coenzyme A oxidase N-terminal
Acyl-CoA_dh_M	PF02770	136 - 233	7.4e-08	Acyl-CoA dehydrogenase, middle domain
ACOX_C_alpha1	PF22924	279 - 445	2.7e-64	Acyl-CoA oxidase, C-alpha1 domain
ACOX	PF01756	485 - 662	2.2e-54	Acyl-CoA oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003378)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G35690 AT4G16760 AT4G16760
fragaria_vesca	FvH4_5g19470
malus_domestica	MD04G1060500.v1.1 MD13G1127300.v1.1
prunus_persica	Prupe.5G065100_v2.0.a1 Prupe.7G067100_v2.0.a1
pyrus_communis	pycom04g05410 pycom13g11040
rosa_chinensis	RchiOBHm_Chr3g0481201 RchiOBHm_Chr3g0481221 RchiOBHm_Chr7g0204041
rosa_laevigata	RLG00000003492 RLG00000023411 RLG00000023414 RLG00000023415
rosa_multiflora	Rmu_sc0000064.1_g000003 Rmu_sc0001311.1_g000009 Rmu_sc0001551.1_g000009 Rmu_sc0001843.1_g000010 Rmu_sc0009910.1_g000005
rosa_roxburghii	Rroxscaffold_3G00253400 Rroxscaffold_6G00400590
rosa_rugosa	Rorug03G0190400 Rorug07G0080100 Rorug07G0080200
rosa_samantha	Rh3AG241300 Rh3BG276600 Rh3DG268000 Rh7AG210200 Rh7BG208600
rosa_wichuraiana	Rw3G021520 Rw3G021530 Rw3G021550 Rw7G018300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	942
Acc16I	TGCGCA	1 cut(s)	746
AccB7I	CCANNNNNTGG	1 cut(s)	1102
AccBSI	CCGCTC	1 cut(s)	1930
AccI	GTMKAC	2 cut(s)	934, 1015
AccII	CGCG	1 cut(s)	461
AciI	CCGC	2 cut(s)	459, 1928
AclI	AACGTT	1 cut(s)	816
AclWI	GGATC	8 cut(s)	24, 122, 131, 236, 966, 1087, 1405, 1919
AcoI	YGGCCR	4 cut(s)	129, 589, 1128, 1219
AcsI	RAATTY	2 cut(s)	624, 686
AcuI	CTGAAG	2 cut(s)	270, 2003
AfaI	GTAC	5 cut(s)	403, 920, 1282, 1305, 1947
AfiI	CCNNNNNNNGG	4 cut(s)	656, 1030, 1102, 1547
AflIII	ACRYGT	1 cut(s)	1396
AjnI	CCWGG	5 cut(s)	139, 471, 529, 655, 914
AjuI	GAANNNNNNNTTGG	2 cut(s)	1655, 1687
Alw21I	GWGCWC	1 cut(s)	199
Alw26I	GTCTC	8 cut(s)	109, 446, 470, 781, 850, 974, 1670, 1796
AlwI	GGATC	8 cut(s)	24, 122, 131, 236, 966, 1087, 1405, 1919
AoxI	GGCC	6 cut(s)	129, 445, 527, 589, 1128, 1219
ApeKI	GCWGC	8 cut(s)	209, 355, 826, 1181, 1262, 1583, 1633, 1636
ApoI	RAATTY	2 cut(s)	624, 686
AspLEI	GCGC	3 cut(s)	28, 747, 1138
AsuHPI	GGTGA	4 cut(s)	683, 1516, 1557, 1736
BalI	TGGCCA	3 cut(s)	131, 591, 1221
BbsI	GAAGAC	1 cut(s)	1343
Bbv12I	GWGCWC	1 cut(s)	199
BbvCI	CCTCAGC	1 cut(s)	1440
BbvI	GCAGC	8 cut(s)	221, 367, 838, 1168, 1249, 1570, 1620, 1648
BccI	CCATC	5 cut(s)	581, 872, 890, 1181, 1946
BcgI	CGANNNNNNTGC	2 cut(s)	1121, 1155
BciT130I	CCWGG	5 cut(s)	141, 473, 531, 657, 916
BciVI	GTATCC	1 cut(s)	1905
BclI	TGATCA	2 cut(s)	640, 1777
BcoDI	GTCTC	8 cut(s)	109, 446, 470, 781, 850, 974, 1670, 1796
BfaI	CTAG	4 cut(s)	789, 1236, 1458, 1740
BfmI	CTRYAG	3 cut(s)	1313, 1584, 1634
BfuI	GTATCC	1 cut(s)	1905
BisI	GCNGC	8 cut(s)	210, 356, 827, 1182, 1263, 1584, 1634, 1637
BlpI	GCTNAGC	1 cut(s)	170
BlsI	GCNGC	8 cut(s)	211, 357, 828, 1183, 1264, 1585, 1635, 1638
Bme1390I	CCNGG	5 cut(s)	141, 473, 531, 657, 916
BmiI	GGNNCC	1 cut(s)	433
BmrFI	CCNGG	5 cut(s)	141, 473, 531, 657, 916
BmrI	ACTGGG	2 cut(s)	548, 1368
BmsI	GCATC	5 cut(s)	269, 865, 1200, 1755, 1822
BmuI	ACTGGG	2 cut(s)	548, 1368
BoxI	GACNNNNGTC	1 cut(s)	986
BpiI	GAAGAC	1 cut(s)	1343
Bpu10I	CCTNAGC	1 cut(s)	1440
Bpu1102I	GCTNAGC	1 cut(s)	170
BpuEI	CTTGAG	3 cut(s)	470, 499, 1490
BsaBI	GATNNNNATC	2 cut(s)	68, 1956
BsaI	GGTCTC	2 cut(s)	781, 1670
BsaJI	CCNNGG	4 cut(s)	752, 1131, 1222, 1858
Bsc4I	CCNNNNNNNGG	4 cut(s)	656, 1030, 1102, 1547
Bse1I	ACTGG	4 cut(s)	543, 1131, 1363, 1773
Bse3DI	GCAATG	1 cut(s)	1594
Bse8I	GATNNNNATC	2 cut(s)	68, 1956
BseBI	CCWGG	5 cut(s)	141, 473, 531, 657, 916
BseDI	CCNNGG	4 cut(s)	752, 1131, 1222, 1858
BseGI	GGATG	5 cut(s)	492, 592, 643, 687, 1968
BseJI	GATNNNNATC	2 cut(s)	68, 1956
BseLI	CCNNNNNNNGG	4 cut(s)	656, 1030, 1102, 1547
BseMI	GCAATG	1 cut(s)	1594
BseMII	CTCAG	8 cut(s)	191, 339, 1019, 1242, 1361, 1431, 1798, 1878
BseNI	ACTGG	4 cut(s)	543, 1131, 1363, 1773
BseRI	GAGGAG	3 cut(s)	49, 74, 365
BseXI	GCAGC	8 cut(s)	221, 367, 838, 1168, 1249, 1570, 1620, 1648
BsgI	GTGCAG	1 cut(s)	1129
Bsh1236I	CGCG	1 cut(s)	461
BshFI	GGCC	6 cut(s)	131, 447, 529, 591, 1130, 1221
BsiHKAI	GWGCWC	1 cut(s)	199
BslFI	GGGAC	4 cut(s)	1256, 1407, 1737, 1794
BslI	CCNNNNNNNGG	4 cut(s)	656, 1030, 1102, 1547
BsmAI	GTCTC	8 cut(s)	109, 446, 470, 781, 850, 974, 1670, 1796
BsmFI	GGGAC	4 cut(s)	1256, 1407, 1737, 1794
BsmI	GAATGC	2 cut(s)	701, 747
BsnI	GGCC	6 cut(s)	131, 447, 529, 591, 1130, 1221
Bso31I	GGTCTC	2 cut(s)	781, 1670
Bsp1286I	GDGCHC	1 cut(s)	199
Bsp1720I	GCTNAGC	1 cut(s)	170
Bsp19I	CCATGG	1 cut(s)	1222
BspACI	CCGC	2 cut(s)	459, 1928
BspANI	GGCC	6 cut(s)	131, 447, 529, 591, 1130, 1221
BspCNI	CTCAG	8 cut(s)	192, 340, 1018, 1243, 1360, 1432, 1797, 1877
BspFNI	CGCG	1 cut(s)	461
BspHI	TCATGA	2 cut(s)	1332, 1960
BspLI	GGNNCC	1 cut(s)	433
BspMAI	CTGCAG	2 cut(s)	1588, 1638
BspPI	GGATC	8 cut(s)	24, 122, 131, 236, 966, 1087, 1405, 1919
BspTNI	GGTCTC	2 cut(s)	781, 1670
BsrBI	CCGCTC	1 cut(s)	1930
BsrDI	GCAATG	1 cut(s)	1594
BsrI	ACTGG	4 cut(s)	543, 1131, 1363, 1773
BssECI	CCNNGG	4 cut(s)	752, 1131, 1222, 1858
BssT1I	CCWWGG	3 cut(s)	752, 1222, 1858
Bst2UI	CCWGG	5 cut(s)	141, 473, 531, 657, 916
Bst4CI	ACNGT	5 cut(s)	667, 923, 1424, 1697, 1886
Bst6I	CTCTTC	3 cut(s)	249, 657, 1025
BstC8I	GCNNGC	8 cut(s)	133, 240, 327, 1032, 1140, 1144, 1761, 1918
BstDSI	CCRYGG	1 cut(s)	1222
BstEII	GGTNACC	1 cut(s)	369
BstENI	CCTNNNNNAGG	1 cut(s)	654
BstF5I	GGATG	5 cut(s)	492, 592, 643, 687, 1968
BstFNI	CGCG	1 cut(s)	461
BstHHI	GCGC	3 cut(s)	28, 747, 1138
BstMAI	GTCTC	8 cut(s)	109, 446, 470, 781, 850, 974, 1670, 1796
BstMWI	GCNNNNNNNGC	7 cut(s)	141, 557, 884, 1148, 1481, 1589, 1769
BstNI	CCWGG	5 cut(s)	141, 473, 531, 657, 916
BstNSI	RCATGY	5 cut(s)	391, 560, 1142, 1400, 1920
BstPAI	GACNNNNGTC	1 cut(s)	986
BstPI	GGTNACC	1 cut(s)	369
BstSCI	CCNGG	5 cut(s)	139, 471, 529, 655, 914
BstSFI	CTRYAG	3 cut(s)	1313, 1584, 1634
BstUI	CGCG	1 cut(s)	461
BstV1I	GCAGC	8 cut(s)	221, 367, 838, 1168, 1249, 1570, 1620, 1648
BstV2I	GAAGAC	1 cut(s)	1343
BstX2I	RGATCY	1 cut(s)	1924
BstXI	CCANNNNNNTGG	1 cut(s)	599
BstYI	RGATCY	1 cut(s)	1924
BsuI	GTATCC	1 cut(s)	1905
BsuRI	GGCC	6 cut(s)	131, 447, 529, 591, 1130, 1221
BtgI	CCRYGG	1 cut(s)	1222
BtgZI	GCGATG	1 cut(s)	868
BtsCI	GGATG	5 cut(s)	492, 592, 643, 687, 1968
BtsI	GCAGTG	3 cut(s)	1146, 1176, 1246
BtsIMutI	CAGTG	9 cut(s)	58, 506, 928, 1124, 1146, 1176, 1246, 1420, 1780
Cac8I	GCNNGC	8 cut(s)	133, 240, 327, 1032, 1140, 1144, 1761, 1918
CciI	TCATGA	2 cut(s)	1332, 1960
CfoI	GCGC	3 cut(s)	28, 747, 1138
CsiI	ACCWGGT	1 cut(s)	914
Csp6I	GTAC	5 cut(s)	402, 919, 1281, 1304, 1946
CspCI	CAANNNNNGTGG	2 cut(s)	347, 382
CviQI	GTAC	5 cut(s)	402, 919, 1281, 1304, 1946
DraI	TTTAAA	1 cut(s)	190
DrdI	GACNNNNNNGTC	1 cut(s)	942
DseDI	GACNNNNNNGTC	1 cut(s)	942
EaeI	YGGCCR	4 cut(s)	129, 589, 1128, 1219
Eam1104I	CTCTTC	3 cut(s)	249, 657, 1025
EarI	CTCTTC	3 cut(s)	249, 657, 1025
Eco130I	CCWWGG	3 cut(s)	752, 1222, 1858
Eco147I	AGGCCT	1 cut(s)	447
Eco31I	GGTCTC	2 cut(s)	781, 1670
Eco57I	CTGAAG	2 cut(s)	270, 2003
Eco91I	GGTNACC	1 cut(s)	369
EcoNI	CCTNNNNNAGG	1 cut(s)	654
EcoO65I	GGTNACC	1 cut(s)	369
EcoRII	CCWGG	5 cut(s)	139, 471, 529, 655, 914
EcoT14I	CCWWGG	3 cut(s)	752, 1222, 1858
EcoT22I	ATGCAT	1 cut(s)	1837
ErhI	CCWWGG	3 cut(s)	752, 1222, 1858
FalI	AAGNNNNNCTT	2 cut(s)	1752, 1784
FaqI	GGGAC	4 cut(s)	1256, 1407, 1737, 1794
FauNDI	CATATG	1 cut(s)	295
FbaI	TGATCA	2 cut(s)	640, 1777
FblI	GTMKAC	2 cut(s)	934, 1015
Fnu4HI	GCNGC	8 cut(s)	210, 356, 827, 1182, 1263, 1584, 1634, 1637
FokI	GGATG	5 cut(s)	479, 599, 650, 694, 1955
Fsp4HI	GCNGC	8 cut(s)	210, 356, 827, 1182, 1263, 1584, 1634, 1637
FspAI	RTGCGCAY	1 cut(s)	746
FspBI	CTAG	4 cut(s)	789, 1236, 1458, 1740
FspI	TGCGCA	1 cut(s)	746
GlaI	GCGC	3 cut(s)	27, 746, 1137
GluI	GCNGC	8 cut(s)	210, 356, 827, 1182, 1263, 1584, 1634, 1637
HaeIII	GGCC	6 cut(s)	131, 447, 529, 591, 1130, 1221
HhaI	GCGC	3 cut(s)	28, 747, 1138
Hin6I	GCGC	3 cut(s)	26, 745, 1136
HinP1I	GCGC	3 cut(s)	26, 745, 1136
HincII	GTYRAC	1 cut(s)	935
HindII	GTYRAC	1 cut(s)	935
HindIII	AAGCTT	2 cut(s)	1761, 1802
HinfI	GANTC	7 cut(s)	732, 757, 809, 1017, 1702, 1789, 1937
HphI	GGTGA	4 cut(s)	683, 1516, 1557, 1736
Hpy166II	GTNNAC	6 cut(s)	536, 935, 950, 1016, 1244, 1737
Hpy188I	TCNGA	8 cut(s)	109, 114, 201, 250, 630, 1052, 1206, 1558
Hpy188III	TCNNGA	5 cut(s)	894, 1250, 1333, 1786, 1961
Hpy8I	GTNNAC	6 cut(s)	536, 935, 950, 1016, 1244, 1737
Hpy99I	CGWCG	1 cut(s)	936
HpyAV	CCTTC	4 cut(s)	106, 172, 1283, 1643
HpyCH4III	ACNGT	5 cut(s)	667, 923, 1424, 1697, 1886
HpyCH4IV	ACGT	1 cut(s)	816
HpyF10VI	GCNNNNNNNGC	7 cut(s)	141, 557, 884, 1148, 1481, 1589, 1769
HpySE526I	ACGT	1 cut(s)	816
HspAI	GCGC	3 cut(s)	26, 745, 1136
Ksp22I	TGATCA	2 cut(s)	640, 1777
LmnI	GCTCC	8 cut(s)	36, 352, 437, 630, 698, 839, 1402, 1998
Lsp1109I	GCAGC	8 cut(s)	221, 367, 838, 1168, 1249, 1570, 1620, 1648
LweI	GCATC	5 cut(s)	269, 865, 1200, 1755, 1822
MabI	ACCWGGT	1 cut(s)	914
MaeI	CTAG	4 cut(s)	789, 1236, 1458, 1740
MaeII	ACGT	1 cut(s)	816
MaeIII	GTNAC	5 cut(s)	369, 661, 784, 1226, 1418
MbiI	CCGCTC	1 cut(s)	1930
MboII	GAAGA	8 cut(s)	79, 263, 266, 644, 1012, 1164, 1208, 1348
MfeI	CAATTG	1 cut(s)	1670
MflI	RGATCY	1 cut(s)	1924
MhlI	GDGCHC	1 cut(s)	199
MlsI	TGGCCA	3 cut(s)	131, 591, 1221
MluNI	TGGCCA	3 cut(s)	131, 591, 1221
MlyI	GAGTC	2 cut(s)	1011, 1798
MmeI	TCCRAC	3 cut(s)	837, 1083, 1184
Mox20I	TGGCCA	3 cut(s)	131, 591, 1221
Mph1103I	ATGCAT	1 cut(s)	1837
MscI	TGGCCA	3 cut(s)	131, 591, 1221
MseI	TTAA	3 cut(s)	189, 333, 1839
MslI	CAYNNNNRTG	1 cut(s)	1722
Msp20I	TGGCCA	3 cut(s)	131, 591, 1221
MspR9I	CCNGG	5 cut(s)	141, 473, 531, 657, 916
MunI	CAATTG	1 cut(s)	1670
Mva1269I	GAATGC	2 cut(s)	701, 747
MvaI	CCWGG	5 cut(s)	141, 473, 531, 657, 916
MvnI	CGCG	1 cut(s)	461
MwoI	GCNNNNNNNGC	7 cut(s)	141, 557, 884, 1148, 1481, 1589, 1769
NcoI	CCATGG	1 cut(s)	1222
NdeI	CATATG	1 cut(s)	295
NlaIV	GGNNCC	1 cut(s)	433
NmeAIII	GCCGAG	2 cut(s)	553, 1156
NmuCI	GTSAC	2 cut(s)	784, 1418
NsbI	TGCGCA	1 cut(s)	746
NsiI	ATGCAT	1 cut(s)	1837
NspI	RCATGY	5 cut(s)	391, 560, 1142, 1400, 1920
PaeI	GCATGC	2 cut(s)	1142, 1920
PagI	TCATGA	2 cut(s)	1332, 1960
PceI	AGGCCT	1 cut(s)	447
PciI	ACATGT	1 cut(s)	1396
PcsI	WCGNNNNNNNCGW	1 cut(s)	118
PctI	GAATGC	2 cut(s)	701, 747
PfeI	GAWTC	5 cut(s)	732, 757, 809, 1702, 1937
PflMI	CCANNNNNTGG	1 cut(s)	1102
PkrI	GCNGC	8 cut(s)	211, 357, 828, 1183, 1264, 1585, 1635, 1638
PleI	GAGTC	2 cut(s)	1011, 1797
PpsI	GAGTC	2 cut(s)	1011, 1797
PscI	ACATGT	1 cut(s)	1396
PshAI	GACNNNNGTC	1 cut(s)	986
Psp1406I	AACGTT	1 cut(s)	816
Psp6I	CCWGG	5 cut(s)	139, 471, 529, 655, 914
PspEI	GGTNACC	1 cut(s)	369
PspGI	CCWGG	5 cut(s)	139, 471, 529, 655, 914
PspN4I	GGNNCC	1 cut(s)	433
PstI	CTGCAG	2 cut(s)	1588, 1638
PsuI	RGATCY	1 cut(s)	1924
RsaI	GTAC	5 cut(s)	403, 920, 1282, 1305, 1947
RsaNI	GTAC	5 cut(s)	402, 919, 1281, 1304, 1946
RseI	CAYNNNNRTG	1 cut(s)	1722
SalI	GTCGAC	1 cut(s)	933
SaqAI	TTAA	3 cut(s)	189, 333, 1839
SatI	GCNGC	8 cut(s)	210, 356, 827, 1182, 1263, 1584, 1634, 1637
SchI	GAGTC	2 cut(s)	1011, 1798
ScrFI	CCNGG	5 cut(s)	141, 473, 531, 657, 916
SduI	GDGCHC	1 cut(s)	199
SexAI	ACCWGGT	1 cut(s)	914
SfaNI	GCATC	5 cut(s)	269, 865, 1200, 1755, 1822
SfcI	CTRYAG	3 cut(s)	1313, 1584, 1634
SmiMI	CAYNNNNRTG	1 cut(s)	1722
SmlI	CTYRAG	3 cut(s)	449, 514, 1469
SmoI	CTYRAG	3 cut(s)	449, 514, 1469
SphI	GCATGC	2 cut(s)	1142, 1920
SseBI	AGGCCT	1 cut(s)	447
SsiI	CCGC	2 cut(s)	459, 1928
SspMI	CTAG	4 cut(s)	789, 1236, 1458, 1740
StuI	AGGCCT	1 cut(s)	447
StyD4I	CCNGG	5 cut(s)	139, 471, 529, 655, 914
StyI	CCWWGG	3 cut(s)	752, 1222, 1858
TaaI	ACNGT	5 cut(s)	667, 923, 1424, 1697, 1886
TaiI	ACGT	1 cut(s)	819
TaqI	TCGA	4 cut(s)	57, 121, 934, 1194
TatI	WGTACW	2 cut(s)	1280, 1303
TfiI	GAWTC	5 cut(s)	732, 757, 809, 1702, 1937
Tru1I	TTAA	3 cut(s)	189, 333, 1839
Tru9I	TTAA	3 cut(s)	189, 333, 1839
TscAI	CASTG	9 cut(s)	58, 513, 928, 1131, 1153, 1183, 1246, 1427, 1780
TseFI	GTSAC	2 cut(s)	784, 1418
TseI	GCWGC	8 cut(s)	209, 355, 826, 1181, 1262, 1583, 1633, 1636
Tsp45I	GTSAC	2 cut(s)	784, 1418
TspGWI	ACGGA	1 cut(s)	599
TspRI	CASTG	9 cut(s)	58, 513, 928, 1131, 1153, 1183, 1246, 1427, 1780
Van91I	CCANNNNNTGG	1 cut(s)	1102
XagI	CCTNNNNNAGG	1 cut(s)	654
XapI	RAATTY	2 cut(s)	624, 686
XceI	RCATGY	5 cut(s)	391, 560, 1142, 1400, 1920
XmiI	GTMKAC	2 cut(s)	934, 1015
XspI	CTAG	4 cut(s)	789, 1236, 1458, 1740
Zsp2I	ATGCAT	1 cut(s)	1837

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.