Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0003378

Physical Location & Seq

Genomic Coordinates Forward (+)

6239479 .. 6242100

Gene Structure 2622 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0080100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1494 bp

ATGGCTTCTGCTGCCACATTTTCCTTAGTGACACAAGTTCTATGCTTGACTCTTTGTTTACTTAGCTTAGGCTGCTCTGCCTTCACTACTGAAGATTACTCAGATGCTCTTGACAAGTCCATTCTCTTCTTCGAGGGCCAGAGGTCCGGGAAGTTGCCATCAAACCAGAGGCTCAATTGGAGGGGCAATTCTGGCTTGTCTGATGGCTCCTCTTATCATGTGGATTTAGTAGGCGGCTACTATGATGCTGGAGATAATGTCAAGTTTGGGCTACCAATGGCCTTCACTACTACATTGTTAGCATGGAGTGTTATTGAGTTTGGTAGCTCTATGCCTAACCAGATTGAAAATGCCAAGGCTGCCGTACGTTGGAGCACAGATTATCTGTTAAAGGCAGCCACCACAACCCCAGGAACCTTATATGTCCAAGTGGCAGATCCAAACATGGACCACAGCTGCTGGGAGAGGCCAGAAGGTATGGATACACCGCGCAATGTTTACAAGGTGTCAACTCAAAATCCAGGGTCCGATGTTGCAGCAGAAACTGCTGCTGCACTGGCTGCAGCTTCCATAGTCTTCAAGGACTCTGACCCTTCTTACTCTGGAAAATTGCTTCACACAGCTATGAAAGTGTTTGATTTTGCAGACAAGTACAGAGGTTCTTACAGTGACTCCCTCGGCTCAGTGGTCTGTCCTTTTTACTGCTCATATTCTGGATACCAAGATGAGCTTCTTTGGGGCGCGTCCTGGATTCATAGAGCCTCGAAGAACAGTTCATACTTGTCATACATCAAGTCCAATGGCCACACATTGGGTGCTGATGACGATGACTACTCTTTTAGTTGGGATGACAAGCGAGCCGGAACAAAGGTCCTCCTTTCCAAGAGCTTTCTAGAGACCAACACTGAAGAATTCCAGATATACAAAGCACACTCAGACAACTACATATGCTCTCTAATTCCAGGATCATCTAGTTTTCAGGCCCAATATACCCCTGGAGGACTTTTGTACAAAGCAAGTGAGAGCAATCTCCAGTATGTTACTTCCACAACACTACTACTCCTTACATATGCAAAGTACCATAGTTCAAACAGAGGAACAGTAAGATGTGGATCCTCAGCTGTCACAGCCGAAACCCTAATCGCACAGGCAAAGAAGCAAGTGGACTACATCCTTGGTGACAATCCGGCAAAGATGTCATACATGGTGGGATTTGGAAAGAAGTATCCACAGCATGTACACCACAGGGGTTCTTCTGTGCCATCTGTACATGAACACCCAGGTCGCATTTCCTGCAACGATGGATTTCAGTACTTCCACTCTGGTTCCCCAAATCCAAATGTGCTTGTTGGAGCCATAGTTGGCGGACCAGACAACAAGGACAACTTCGCCGATGACCGGAACAACTACCAGCAATCCGAGCCTGCCACTTACATCAATGCACCATTTGTTGGGGCTCTTGCTTTCTTCTCTGCCAACACCAACCCAAAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0001676 GO:0003674 GO:0003824 GO:0003995 GO:0003997 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0005911 GO:0006082 GO:0006629 GO:0006631 GO:0006635 GO:0006950 GO:0008150 GO:0008152 GO:0009056 GO:0009058 GO:0009062 GO:0009506 GO:0009605 GO:0009607 GO:0009611 GO:0009620 GO:0009694 GO:0009695 GO:0009987 GO:0010035 GO:0010038 GO:0010817 GO:0016042 GO:0016053 GO:0016054 GO:0016491 GO:0016627 GO:0016634 GO:0019395 GO:0019752 GO:0030054 GO:0030258 GO:0032787 GO:0033539 GO:0034440 GO:0036094 GO:0042221 GO:0042445 GO:0042446 GO:0042579 GO:0043167 GO:0043168 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044249 GO:0044255 GO:0044281 GO:0044282 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0046395 GO:0046686 GO:0048037 GO:0050660 GO:0050662 GO:0050896 GO:0051704 GO:0051707 GO:0055044 GO:0055114 GO:0065007 GO:0065008 GO:0071704 GO:0072329 GO:0072330 GO:0097159 GO:1901265 GO:1901363 GO:1901575 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00071 ko00592 ko01040 ko01100 ko01110 ko01212 ko03320 ko04024 ko04146 map00071 map00592 map01040 map01100 map01110 map01212 map03320 map04024 map04146

Pfam Domains

Protein Families

ACOX Acyl-CoA_dh_M Acyl-CoA_ox_N

Protein Analysis

497

Amino Acids

54.21

Weight (kDa)

5.9

Isoelectric Point (pI)

29.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_9	PF00759	33 - 487	1.1e-163	Glycosyl hydrolase family 9

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003378)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G35690 AT4G16760 AT4G16760
fragaria_vesca	FvH4_5g19470
malus_domestica	MD04G1060500.v1.1 MD13G1127300.v1.1
prunus_persica	Prupe.5G065100_v2.0.a1 Prupe.7G067100_v2.0.a1
pyrus_communis	pycom04g05410 pycom13g11040
rosa_chinensis	RchiOBHm_Chr3g0481201 RchiOBHm_Chr3g0481221 RchiOBHm_Chr7g0204041
rosa_laevigata	RLG00000003492 RLG00000023411 RLG00000023414 RLG00000023415
rosa_multiflora	Rmu_sc0000064.1_g000003 Rmu_sc0001311.1_g000009 Rmu_sc0001551.1_g000009 Rmu_sc0001843.1_g000010 Rmu_sc0009910.1_g000005
rosa_roxburghii	Rroxscaffold_3G00253400 Rroxscaffold_6G00400590
rosa_rugosa	Rorug03G0190400 Rorug07G0080100 Rorug07G0080200
rosa_samantha	Rh3AG241300 Rh3BG276600 Rh3DG268000 Rh7AG210200 Rh7BG208600
rosa_wichuraiana	Rw3G021520 Rw3G021530 Rw3G021550 Rw7G018300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	811, 1451
AccII	CGCG	2 cut(s)	490, 743
AciI	CCGC	3 cut(s)	234, 488, 1365
AclWI	GGATC	4 cut(s)	431, 973, 1107, 1120
AcoI	YGGCCR	1 cut(s)	802
AcsI	RAATTY	1 cut(s)	911
AcuI	CTGAAG	2 cut(s)	111, 927
AfaI	GTAC	7 cut(s)	366, 653, 1010, 1079, 1239, 1269, 1313
AfiI	CCNNNNNNNGG	4 cut(s)	369, 811, 1398, 1451
AgsI	TTSAA	3 cut(s)	347, 580, 1089
AjnI	CCWGG	6 cut(s)	409, 520, 746, 961, 994, 1279
AjuI	GAANNNNNNNTTGG	2 cut(s)	714, 746
AluBI	AGCT	8 cut(s)	66, 327, 456, 566, 623, 730, 888, 1121
AluI	AGCT	8 cut(s)	66, 327, 456, 566, 623, 730, 888, 1121
Alw21I	GWGCWC	1 cut(s)	377
Alw26I	GTCTC	1 cut(s)	890
AlwI	GGATC	4 cut(s)	431, 973, 1107, 1120
AlwNI	CAGNNNCTG	2 cut(s)	459, 545
AoxI	GGCC	5 cut(s)	136, 279, 467, 802, 981
ApoI	RAATTY	1 cut(s)	911
AspLEI	GCGC	2 cut(s)	492, 743
AspS9I	GGNCC	7 cut(s)	136, 144, 448, 525, 871, 982, 1367
AsuC2I	CCSGG	1 cut(s)	148
AsuHPI	GGTGA	1 cut(s)	1190
AvaII	GGWCC	5 cut(s)	144, 448, 525, 871, 1367
BalI	TGGCCA	1 cut(s)	804
BamHI	GGATCC	1 cut(s)	1112
BanII	GRGCYC	1 cut(s)	1459
BbsI	GAAGAC	1 cut(s)	568
Bbv12I	GWGCWC	1 cut(s)	377
BbvCI	CCTCAGC	1 cut(s)	1117
BbvI	GCAGC	9 cut(s)	59, 346, 407, 443, 535, 538, 547, 548, 575
BccI	CCATC	4 cut(s)	166, 197, 1270, 1295
BceAI	ACGGC	1 cut(s)	347
BciT130I	CCWGG	6 cut(s)	411, 522, 748, 963, 996, 1281
BciVI	GTATCC	3 cut(s)	475, 710, 1236
BcnI	CCSGG	1 cut(s)	148
BcoDI	GTCTC	1 cut(s)	890
BfaI	CTAG	2 cut(s)	893, 972
BfmI	CTRYAG	1 cut(s)	561
BfuI	GTATCC	3 cut(s)	475, 710, 1236
BmcAI	AGTACT	1 cut(s)	1313
Bme1390I	CCNGG	7 cut(s)	148, 411, 522, 748, 963, 996, 1281
Bme18I	GGWCC	5 cut(s)	144, 448, 525, 871, 1367
BmgT120I	GGNCC	7 cut(s)	136, 144, 448, 525, 871, 982, 1367
BmiI	GGNNCC	6 cut(s)	208, 415, 526, 1114, 1327, 1354
BmrFI	CCNGG	7 cut(s)	148, 411, 522, 748, 963, 996, 1281
BmsI	GCATC	2 cut(s)	94, 235
BpiI	GAAGAC	1 cut(s)	568
BpmI	CTGGAG	3 cut(s)	270, 1016, 1017
Bpu10I	CCTNAGC	2 cut(s)	67, 1117
BpuMI	CCSGG	1 cut(s)	148
BsaBI	GATNNNNATC	1 cut(s)	1111
BsaI	GGTCTC	1 cut(s)	890
BsaJI	CCNNGG	7 cut(s)	354, 409, 521, 676, 994, 1174, 1279
BsaWI	WCCGGW	1 cut(s)	1398
BsaXI	ACNNNNNCTCC	8 cut(s)	243, 273, 656, 686, 1044, 1074, 1344, 1374
Bsc4I	CCNNNNNNNGG	4 cut(s)	369, 811, 1398, 1451
Bse1I	ACTGG	2 cut(s)	561, 1033
Bse3DI	GCAATG	1 cut(s)	499
Bse8I	GATNNNNATC	1 cut(s)	1111
BseBI	CCWGG	6 cut(s)	411, 522, 748, 963, 996, 1281
BseDI	CCNNGG	7 cut(s)	354, 409, 521, 676, 994, 1174, 1279
BseGI	GGATG	2 cut(s)	853, 1170
BseJI	GATNNNNATC	1 cut(s)	1111
BseLI	CCNNNNNNNGG	4 cut(s)	369, 811, 1398, 1451
BseMI	GCAATG	1 cut(s)	499
BseMII	CTCAG	4 cut(s)	114, 696, 948, 1131
BseNI	ACTGG	2 cut(s)	561, 1033
BseRI	GAGGAG	1 cut(s)	199
BseXI	GCAGC	9 cut(s)	59, 346, 407, 443, 535, 538, 547, 548, 575
BseYI	CCCAGC	1 cut(s)	459
BsgI	GTGCAG	1 cut(s)	537
Bsh1236I	CGCG	2 cut(s)	490, 743
BshFI	GGCC	5 cut(s)	138, 281, 469, 804, 983
BsiHKAI	GWGCWC	1 cut(s)	377
BsiSI	CCGG	4 cut(s)	147, 861, 1187, 1399
BsiWI	CGTACG	1 cut(s)	364
BslI	CCNNNNNNNGG	4 cut(s)	369, 811, 1398, 1451
BsmAI	GTCTC	1 cut(s)	890
BsnI	GGCC	5 cut(s)	138, 281, 469, 804, 983
Bso31I	GGTCTC	1 cut(s)	890
Bsp1286I	GDGCHC	2 cut(s)	377, 1459
Bsp1407I	TGTACA	3 cut(s)	1008, 1237, 1267
Bsp143I	GATC	3 cut(s)	436, 965, 1112
BspACI	CCGC	3 cut(s)	234, 488, 1365
BspANI	GGCC	5 cut(s)	138, 281, 469, 804, 983
BspCNI	CTCAG	4 cut(s)	113, 695, 947, 1130
BspFNI	CGCG	2 cut(s)	490, 743
BspLI	GGNNCC	6 cut(s)	208, 415, 526, 1114, 1327, 1354
BspMAI	CTGCAG	1 cut(s)	565
BspPI	GGATC	4 cut(s)	431, 973, 1107, 1120
BspTNI	GGTCTC	1 cut(s)	890
BsrDI	GCAATG	1 cut(s)	499
BsrGI	TGTACA	3 cut(s)	1008, 1237, 1267
BsrI	ACTGG	2 cut(s)	561, 1033
BssECI	CCNNGG	7 cut(s)	354, 409, 521, 676, 994, 1174, 1279
BssMI	GATC	3 cut(s)	436, 965, 1112
BssT1I	CCWWGG	2 cut(s)	354, 1174
Bst2UI	CCWGG	6 cut(s)	411, 522, 748, 963, 996, 1281
Bst4CI	ACNGT	3 cut(s)	668, 773, 1102
Bst6I	CTCTTC	1 cut(s)	131
BstAPI	GCANNNNNTGC	3 cut(s)	545, 560, 1293
BstAUI	TGTACA	3 cut(s)	1008, 1237, 1267
BstC8I	GCNNGC	2 cut(s)	858, 1425
BstDEI	CTNAG	7 cut(s)	25, 62, 67, 100, 682, 934, 1117
BstF5I	GGATG	2 cut(s)	853, 1170
BstFNI	CGCG	2 cut(s)	490, 743
BstHHI	GCGC	2 cut(s)	492, 743
BstKTI	GATC	3 cut(s)	439, 968, 1115
BstMAI	GTCTC	1 cut(s)	890
BstMBI	GATC	3 cut(s)	436, 965, 1112
BstNI	CCWGG	6 cut(s)	411, 522, 748, 963, 996, 1281
BstNSI	RCATGY	1 cut(s)	1238
BstSCI	CCNGG	7 cut(s)	146, 409, 520, 746, 961, 994, 1279
BstSFI	CTRYAG	1 cut(s)	561
BstUI	CGCG	2 cut(s)	490, 743
BstV1I	GCAGC	9 cut(s)	59, 346, 407, 443, 535, 538, 547, 548, 575
BstV2I	GAAGAC	1 cut(s)	568
BstX2I	RGATCY	2 cut(s)	436, 1112
BstYI	RGATCY	2 cut(s)	436, 1112
BsuI	GTATCC	3 cut(s)	475, 710, 1236
BsuRI	GGCC	5 cut(s)	138, 281, 469, 804, 983
BtsCI	GGATG	2 cut(s)	853, 1170
BtsIMutI	CAGTG	4 cut(s)	554, 673, 690, 903
Cac8I	GCNNGC	2 cut(s)	858, 1425
CaiI	CAGNNNCTG	2 cut(s)	459, 545
CfoI	GCGC	2 cut(s)	492, 743
Cfr13I	GGNCC	7 cut(s)	136, 144, 448, 525, 871, 982, 1367
CseI	GACGC	1 cut(s)	732
Csp6I	GTAC	7 cut(s)	365, 652, 1009, 1078, 1238, 1268, 1312
CviAII	CATG	6 cut(s)	218, 303, 445, 1204, 1235, 1271
CviQI	GTAC	7 cut(s)	365, 652, 1009, 1078, 1238, 1268, 1312
DdeI	CTNAG	7 cut(s)	25, 62, 67, 100, 682, 934, 1117
DpnI	GATC	3 cut(s)	438, 967, 1114
DpnII	GATC	3 cut(s)	436, 965, 1112
EaeI	YGGCCR	1 cut(s)	802
Eam1104I	CTCTTC	1 cut(s)	131
EarI	CTCTTC	1 cut(s)	131
EciI	GGCGGA	1 cut(s)	1380
Eco130I	CCWWGG	2 cut(s)	354, 1174
Eco24I	GRGCYC	1 cut(s)	1459
Eco31I	GGTCTC	1 cut(s)	890
Eco47I	GGWCC	5 cut(s)	144, 448, 525, 871, 1367
Eco57I	CTGAAG	2 cut(s)	111, 927
EcoO109I	RGGNCCY	1 cut(s)	871
EcoRI	GAATTC	1 cut(s)	911
EcoRII	CCWGG	6 cut(s)	409, 520, 746, 961, 994, 1279
EcoT14I	CCWWGG	2 cut(s)	354, 1174
EcoT38I	GRGCYC	1 cut(s)	1459
ErhI	CCWWGG	2 cut(s)	354, 1174
FaeI	CATG	6 cut(s)	221, 306, 448, 1207, 1238, 1274
FalI	AAGNNNNNCTT	4 cut(s)	714, 746, 1370, 1402
FatI	CATG	6 cut(s)	217, 302, 444, 1203, 1234, 1270
FauNDI	CATATG	2 cut(s)	947, 1069
FokI	GGATG	2 cut(s)	860, 1157
FriOI	GRGCYC	1 cut(s)	1459
FspBI	CTAG	2 cut(s)	893, 972
GlaI	GCGC	2 cut(s)	491, 742
GsaI	CCCAGC	1 cut(s)	463
GsuI	CTGGAG	3 cut(s)	270, 1016, 1017
HaeIII	GGCC	5 cut(s)	138, 281, 469, 804, 983
HapII	CCGG	4 cut(s)	147, 861, 1187, 1399
HgaI	GACGC	1 cut(s)	732
HhaI	GCGC	2 cut(s)	492, 743
Hin1II	CATG	6 cut(s)	221, 306, 448, 1207, 1238, 1274
Hin6I	GCGC	2 cut(s)	490, 741
HinP1I	GCGC	2 cut(s)	490, 741
HincII	GTYRAC	1 cut(s)	510
HindII	GTYRAC	1 cut(s)	510
HinfI	GANTC	4 cut(s)	49, 584, 671, 751
HpaII	CCGG	4 cut(s)	147, 861, 1187, 1399
HphI	GGTGA	1 cut(s)	1190
Hpy166II	GTNNAC	5 cut(s)	59, 499, 510, 1165, 1240
Hpy188I	TCNGA	6 cut(s)	103, 202, 529, 589, 937, 1420
Hpy188III	TCNNGA	5 cut(s)	110, 603, 714, 893, 916
Hpy8I	GTNNAC	5 cut(s)	59, 499, 510, 1165, 1240
HpyAV	CCTTC	4 cut(s)	91, 292, 467, 603
HpyCH4III	ACNGT	3 cut(s)	668, 773, 1102
HpyCH4IV	ACGT	1 cut(s)	367
HpyCH4V	TGCA	7 cut(s)	536, 554, 563, 644, 1073, 1296, 1442
HpyF3I	CTNAG	7 cut(s)	25, 62, 67, 100, 682, 934, 1117
HpySE526I	ACGT	1 cut(s)	367
Hsp92II	CATG	6 cut(s)	221, 306, 448, 1207, 1238, 1274
HspAI	GCGC	2 cut(s)	490, 741
Kzo9I	GATC	3 cut(s)	436, 965, 1112
LmnI	GCTCC	3 cut(s)	212, 372, 1352
Lsp1109I	GCAGC	9 cut(s)	59, 346, 407, 443, 535, 538, 547, 548, 575
LweI	GCATC	2 cut(s)	94, 235
MaeI	CTAG	2 cut(s)	893, 972
MaeII	ACGT	1 cut(s)	367
MaeIII	GTNAC	5 cut(s)	28, 668, 1039, 1123, 1178
MalI	GATC	3 cut(s)	438, 967, 1114
MboI	GATC	3 cut(s)	436, 965, 1112
MboII	GAAGA	8 cut(s)	104, 118, 121, 568, 778, 920, 1245, 1459
MfeI	CAATTG	1 cut(s)	175
MflI	RGATCY	2 cut(s)	436, 1112
MhlI	GDGCHC	2 cut(s)	377, 1459
MlsI	TGGCCA	1 cut(s)	804
MluCI	AATT	5 cut(s)	175, 187, 608, 911, 957
MluNI	TGGCCA	1 cut(s)	804
MlyI	GAGTC	3 cut(s)	43, 578, 665
MmeI	TCCRAC	2 cut(s)	350, 1330
Mox20I	TGGCCA	1 cut(s)	804
MscI	TGGCCA	1 cut(s)	804
MseI	TTAA	1 cut(s)	389
MslI	CAYNNNNRTG	1 cut(s)	623
Msp20I	TGGCCA	1 cut(s)	804
MspA1I	CMGCKG	2 cut(s)	456, 1121
MspI	CCGG	4 cut(s)	147, 861, 1187, 1399
MspR9I	CCNGG	7 cut(s)	148, 411, 522, 748, 963, 996, 1281
MunI	CAATTG	1 cut(s)	175
MvaI	CCWGG	6 cut(s)	411, 522, 748, 963, 996, 1281
MvnI	CGCG	2 cut(s)	490, 743
NciI	CCSGG	1 cut(s)	148
NdeI	CATATG	2 cut(s)	947, 1069
NdeII	GATC	3 cut(s)	436, 965, 1112
NlaIII	CATG	6 cut(s)	221, 306, 448, 1207, 1238, 1274
NlaIV	GGNNCC	6 cut(s)	208, 415, 526, 1114, 1327, 1354
NmeAIII	GCCGAG	1 cut(s)	657
NmuCI	GTSAC	4 cut(s)	28, 668, 1123, 1178
NspI	RCATGY	1 cut(s)	1238
PfeI	GAWTC	1 cut(s)	751
Pfl23II	CGTACG	1 cut(s)	364
PflMI	CCANNNNNTGG	2 cut(s)	811, 1451
PfoI	TCCNGGA	3 cut(s)	146, 746, 961
PleI	GAGTC	3 cut(s)	43, 578, 665
PpsI	GAGTC	3 cut(s)	43, 578, 665
PpuMI	RGGWCCY	1 cut(s)	871
Psp5II	RGGWCCY	1 cut(s)	871
Psp6I	CCWGG	6 cut(s)	409, 520, 746, 961, 994, 1279
PspFI	CCCAGC	1 cut(s)	459
PspGI	CCWGG	6 cut(s)	409, 520, 746, 961, 994, 1279
PspLI	CGTACG	1 cut(s)	364
PspN4I	GGNNCC	6 cut(s)	208, 415, 526, 1114, 1327, 1354
PspPI	GGNCC	7 cut(s)	136, 144, 448, 525, 871, 982, 1367
PspPPI	RGGWCCY	1 cut(s)	871
PsrI	GAACNNNNNNTAC	2 cut(s)	761, 793
PstI	CTGCAG	1 cut(s)	565
PstNI	CAGNNNCTG	2 cut(s)	459, 545
PsuI	RGATCY	2 cut(s)	436, 1112
PvuII	CAGCTG	2 cut(s)	456, 1121
RsaI	GTAC	7 cut(s)	366, 653, 1010, 1079, 1239, 1269, 1313
RsaNI	GTAC	7 cut(s)	365, 652, 1009, 1078, 1238, 1268, 1312
RseI	CAYNNNNRTG	1 cut(s)	623
SaqAI	TTAA	1 cut(s)	389
Sau3AI	GATC	3 cut(s)	436, 965, 1112
Sau96I	GGNCC	7 cut(s)	136, 144, 448, 525, 871, 982, 1367
ScaI	AGTACT	1 cut(s)	1313
SchI	GAGTC	3 cut(s)	43, 578, 665
ScrFI	CCNGG	7 cut(s)	148, 411, 522, 748, 963, 996, 1281
SduI	GDGCHC	2 cut(s)	377, 1459
SfaNI	GCATC	2 cut(s)	94, 235
SfcI	CTRYAG	1 cut(s)	561
SinI	GGWCC	5 cut(s)	144, 448, 525, 871, 1367
SmiMI	CAYNNNNRTG	1 cut(s)	623
Sse9I	AATT	5 cut(s)	175, 187, 608, 911, 957
SsiI	CCGC	3 cut(s)	234, 488, 1365
SspMI	CTAG	2 cut(s)	893, 972
StyD4I	CCNGG	7 cut(s)	146, 409, 520, 746, 961, 994, 1279
StyI	CCWWGG	2 cut(s)	354, 1174
TaaI	ACNGT	3 cut(s)	668, 773, 1102
TaiI	ACGT	1 cut(s)	370
TaqI	TCGA	2 cut(s)	132, 764
TasI	AATT	5 cut(s)	175, 187, 608, 911, 957
TatI	WGTACW	5 cut(s)	651, 1008, 1237, 1267, 1311
TauI	GCSGC	1 cut(s)	237
TfiI	GAWTC	1 cut(s)	751
Tru1I	TTAA	1 cut(s)	389
Tru9I	TTAA	1 cut(s)	389
TscAI	CASTG	4 cut(s)	561, 673, 690, 910
TseFI	GTSAC	4 cut(s)	28, 668, 1123, 1178
Tsp45I	GTSAC	4 cut(s)	28, 668, 1123, 1178
TspDTI	ATGAA	4 cut(s)	641, 743, 765, 1287
TspRI	CASTG	4 cut(s)	561, 673, 690, 910
Van91I	CCANNNNNTGG	2 cut(s)	811, 1451
VpaK11BI	GGWCC	5 cut(s)	144, 448, 525, 871, 1367
XapI	RAATTY	1 cut(s)	911
XbaI	TCTAGA	1 cut(s)	892
XceI	RCATGY	1 cut(s)	1238
XcmI	CCANNNNNNNNNTGG	1 cut(s)	992
XspI	CTAG	2 cut(s)	893, 972
ZrmI	AGTACT	1 cut(s)	1313

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.