Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0012456

Physical Location & Seq

Genomic Coordinates Reverse (-)

13061842 .. 13063992

Gene Structure 2151 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g21640.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2151 bp

ATGGCTACTACCAGTAGCATTCACTTCACTGTGAACTCCTCAGAAACCAAGAGACCCATCTTCTTCACTTCACCTCTCAAACTAATCCCCCCCAAAAGATTCACCATTTCTTGCAGGTCCACCAAGTCCCCTCCTAAATCTCCTCCAGACTTATCACCCCCCCACAACAAGAACACCAACACCACCACCAAAACCAAAACCAAAACCCAATCTTTGTCTGACCAACTCAAGCCTCTAACCACCACCACCCTTCCTCCCAAAGACCAACCCCAAGTCCTATCCAAACCCAAGTCCATCTGGGTCAACCCAGCCAAGCCCAAACGCTCAGTCCTATCCCTCCAGAGGCAGAAGCGCTCTCTCTACTCCTACAATCCTCAGGTCAGAGACCTCAGGCTCTTTGCCCAGAAGCTCAATGACTGTGGCTCTTCTCAAGAAGCTTTCTTGGCTGCTCTTGAAGAAATCCCACACCCACCCACCAGAGAAAATGCCCTTCTGATTCTCAACAGCTTGAAGCCATGGCAGAAGACCCACATGTTCTTCAACTGGGTCAAGACCCAGAACCTGTTCCCCATGGAGACTATCTTCTACAATGTCACCATGAAGTCCATGAGGTTTGGGAGGCAGTTTCAGCTGATTGAGGAGCTTGCTGAGGACATGGTGAGCAATGGGGTTGATCTTGACAACATTACTTACTCGACGATTATCACTTGTGCCAAAAGGTCCAAGCTTTTCGACAAGGCGGTGGAGTGGTTTGAGAGGATGTACAAGACTGGTTTGATGCCTGATGAGGTGACTTACTCTGCTATTTTGGATGTTTATGCTAAATTGGGGAAGGTTGAGGAGGTGCTTAGTTTATATGAGAGAGGGAGGGCTAGTGGGTGGACACCTGACCCTATTGCATTTTCCGTGTTGGGTAAGATGTTTGGTGAGGCTGGGGACTATGATGGTATTAGGTATGTCTTGCAGGAAATGGCTGCTATTGGTGTGAAGCCGAATTTGGTTGTGTACAATACGTTGTTAGAGGCAATGGGGAAGGCTGGAAAGCCTGGTTTGGCTAGGAGTTTGTTTGAAGAAATGGTGGCGTCGGGGCTAACCCCAAATGAGAAGACATTGACTGCGCTTGTTAAGATTTATGGGAAGGCGAGGTGGGCTAGAGACGCGTTGGACTTGTGGGAACGGATGAGGTCGAATAAGTGGCCTATGGACTTCATTTTGTATAACACATTGTTGAATATGTGTGCCGACCTTGGTTTGGAGGATGAGGCTAAGAGGCTTTTTGAGGATATGAAGCAGTCAGAGCACTGTAGGCCGGATAGTTATAGTTACACGGCAATGTTGAACATCTTTGGGAGTGGAGGGAATGCTGATGAGGCCATGGAGTTATTTGAAGAAATGTCCAAGAAGGGCGTGCATCTCAATGTCATGGGCTGCACTTGTTTGATACAGTGCTTGGGGAGAGCTAAAAGGTTTGGTGATATGGTTCGAGTCTTTAATGTTGCGGTTGAAAGAGGGGTTAAACCAGATGATCGGCTCTGTGGGTGTTTACTGTCTGTTGTGTCATTGTGTGAGAAAACTGAGGATGAGGATATGGTCTTTTCATGTTTGCAGCAAGCCAATCTGAAGTTGGTTACCCTCGTGAAACTACTGCAAGATGAGAAAGTAGGATTTGAAGCTATTAAAGACGAATTCAGGGATGTTATTGGTAGCACTGCAGTTGAATCCAGAAGACCCTTCTGCAATTGCTTGATTGATATATGCAGAAACAAAAATAAGCACGAGAGAGCTCATGAGCTGCTCTATCTAGGAACCCTATATGGTTTGTACCCGGGTTTACACAACAAGACGGCAAACGAGTGGTGTTTAGATGTTAGGTCACTATCCATTGGTGCAGCTCACACTGCACTTGAAGAGTGGATGGGAACTCTATACAAAATCATTCAGCGTGAAGAGGCGCTGCCGAAGTTGTTTTCTGCTCAAACCGGTGCTGGAACTCACAAATTCTCTCAAGGACTGGCTCATTCATTCGGTTCTCATGTGAAGAAGTTGGCTGCACCATTTCGGCAAAGTGAAGAGAAAGCTGGTTGTTTTGTGGCAACAAGGGAGGATTTAGTGTCATGGGTGCAATCACAGGCGCAATCAATCACTGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

717

Amino Acids

80.74

Weight (kDa)

8.75

Isoelectric Point (pI)

44.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_3	PF13812	215 - 274	7.7e-09	Pentatricopeptide repeat domain
PPR_2	PF13041	233 - 275	5.2e-07	PPR repeat family
PPR_long	PF17177	280 - 378	2.8e-08	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	320 - 380	2.6e-09	Pentatricopeptide repeat domain
PPR_1	PF12854	328 - 360	3.5e-06	PPR repeat
PPR_2	PF13041	331 - 376	8.9e-11	PPR repeat family
PPR_long	PF17177	384 - 539	2.5e-09	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	404 - 447	3.2e-09	PPR repeat family
PPR_1	PF12854	434 - 466	1.3e-06	PPR repeat
PPR_2	PF13041	437 - 474	5.2e-07	PPR repeat family
PPR	PF01535	440 - 470	2.6e-07	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0012456)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G46580
fragaria_vesca	FvH4_5g21640
malus_domestica	MD06G1031400.v1.1 MD16G1277300.v1.1
prunus_persica	Prupe.5G040700_v2.0.a1
pyrus_communis	pycom06g02620 pycom16g24660
rosa_chinensis	RchiOBHm_Chr7g0209101
rosa_laevigata	RLG00000003167
rosa_multiflora	Rmu_co8470613.1_g000001 Rmu_sc0000821.1_g000010 Rmu_sc0009521.1_g000001
rosa_roxburghii	Rroxscaffold_3G00249750
rosa_rugosa	Rorug07G0109100
rosa_samantha	Rh7AG243500 Rh7BG238600 Rh7CG258700 Rh7DG250500
rosa_wichuraiana	Rw7G020640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	105
AccII	CGCG	1 cut(s)	1160
AciI	CCGC	2 cut(s)	740, 1499
AcsI	RAATTY	3 cut(s)	994, 1685, 1997
AcuI	CTGAAG	1 cut(s)	1640
AcyI	GRCGYC	1 cut(s)	1082
AfaI	GTAC	3 cut(s)	764, 1007, 1823
AfeI	AGCGCT	1 cut(s)	353
AfiI	CCNNNNNNNGG	2 cut(s)	342, 1252
AflIII	ACRYGT	2 cut(s)	531, 1158
AgeI	ACCGGT	1 cut(s)	1979
AjnI	CCWGG	1 cut(s)	1045
AjuI	GAANNNNNNNTTGG	2 cut(s)	980, 1012
Alw21I	GWGCWC	2 cut(s)	1302, 1786
Alw26I	GTCTC	4 cut(s)	46, 378, 569, 1149
AlwNI	CAGNNNCTG	1 cut(s)	562
Ama87I	CYCGRG	1 cut(s)	1825
Aor51HI	AGCGCT	1 cut(s)	353
AoxI	GGCC	3 cut(s)	1196, 1307, 1371
ApeKI	GCWGC	8 cut(s)	446, 974, 1428, 1606, 1792, 1889, 1954, 2048
ApoI	RAATTY	3 cut(s)	994, 1685, 1997
ArsI	GACNNNNNNTTYG	2 cut(s)	312, 344
AsiGI	ACCGGT	1 cut(s)	1979
Asp700I	GAANNNNTTC	1 cut(s)	563
AspLEI	GCGC	4 cut(s)	354, 1120, 1954, 2134
AspS9I	GGNCC	2 cut(s)	117, 720
AsuC2I	CCSGG	2 cut(s)	1826, 1827
AsuHPI	GGTGA	8 cut(s)	63, 94, 147, 586, 670, 802, 938, 1484
AvaI	CYCGRG	1 cut(s)	1825
AvaII	GGWCC	2 cut(s)	117, 720
AxyI	CCTNAGG	2 cut(s)	375, 389
BanII	GRGCYC	1 cut(s)	1786
BauI	CACGAG	2 cut(s)	1634, 1775
BbsI	GAAGAC	3 cut(s)	530, 1112, 1732
Bbv12I	GWGCWC	2 cut(s)	1302, 1786
BbvCI	CCTCAGC	1 cut(s)	648
BbvI	GCAGC	8 cut(s)	433, 961, 1415, 1618, 1779, 1901, 1941, 2035
BccI	CCATC	4 cut(s)	65, 302, 938, 1909
BceAI	ACGGC	2 cut(s)	1344, 1860
BciT130I	CCWGG	1 cut(s)	1047
BcnI	CCSGG	2 cut(s)	1826, 1827
BcoDI	GTCTC	4 cut(s)	46, 378, 569, 1149
BfaI	CTAG	4 cut(s)	873, 1056, 1152, 1802
BfmI	CTRYAG	2 cut(s)	1303, 1710
BfoI	RGCGCY	2 cut(s)	355, 1955
BfuAI	ACCTGC	1 cut(s)	105
BisI	GCNGC	8 cut(s)	447, 975, 1429, 1607, 1793, 1890, 1955, 2049
BlsI	GCNGC	8 cut(s)	448, 976, 1430, 1608, 1794, 1891, 1956, 2050
Bme1390I	CCNGG	3 cut(s)	1047, 1826, 1827
Bme18I	GGWCC	2 cut(s)	117, 720
BmeT110I	CYCGRG	1 cut(s)	1825
BmgT120I	GGNCC	2 cut(s)	117, 720
BmiI	GGNNCC	1 cut(s)	1807
BmrFI	CCNGG	3 cut(s)	1047, 1826, 1827
BmrI	ACTGGG	1 cut(s)	553
BmsI	GCATC	2 cut(s)	768, 1420
BmuI	ACTGGG	1 cut(s)	553
BpiI	GAAGAC	3 cut(s)	530, 1112, 1732
BpmI	CTGGAG	2 cut(s)	129, 323
Bpu10I	CCTNAGC	1 cut(s)	648
BpuEI	CTTGAG	3 cut(s)	212, 414, 1989
BpuMI	CCSGG	2 cut(s)	1826, 1827
BsaHI	GRCGYC	1 cut(s)	1082
BsaI	GGTCTC	2 cut(s)	46, 378
BsaJI	CCNNGG	5 cut(s)	515, 570, 1246, 1374, 1825
BsaWI	WCCGGW	1 cut(s)	1979
BsaXI	ACNNNNNCTCC	4 cut(s)	238, 268, 859, 889
Bsc4I	CCNNNNNNNGG	2 cut(s)	342, 1252
Bse118I	RCCGGY	1 cut(s)	1979
Bse1I	ACTGG	4 cut(s)	12, 548, 775, 2016
Bse21I	CCTNAGG	2 cut(s)	375, 389
Bse3DI	GCAATG	3 cut(s)	670, 1032, 1338
BseBI	CCWGG	1 cut(s)	1047
BseDI	CCNNGG	5 cut(s)	515, 570, 1246, 1374, 1825
BseGI	GGATG	7 cut(s)	765, 817, 1185, 1264, 1585, 1699, 1920
BseLI	CCNNNNNNNGG	2 cut(s)	342, 1252
BseMI	GCAATG	3 cut(s)	670, 1032, 1338
BseMII	CTCAG	6 cut(s)	54, 339, 389, 403, 639, 1566
BseNI	ACTGG	4 cut(s)	12, 548, 775, 2016
BseRI	GAGGAG	4 cut(s)	28, 132, 653, 854
BseXI	GCAGC	8 cut(s)	433, 961, 1415, 1618, 1779, 1901, 1941, 2035
BseYI	CCCAGC	2 cut(s)	307, 932
BsgI	GTGCAG	4 cut(s)	1414, 1884, 1908, 2034
Bsh1236I	CGCG	1 cut(s)	1160
BshFI	GGCC	3 cut(s)	1198, 1309, 1373
BshTI	ACCGGT	1 cut(s)	1979
BsiHKAI	GWGCWC	2 cut(s)	1302, 1786
BsiHKCI	CYCGRG	1 cut(s)	1825
BsiSI	CCGG	3 cut(s)	1310, 1826, 1980
BslFI	GGGAC	2 cut(s)	112, 950
BslI	CCNNNNNNNGG	2 cut(s)	342, 1252
BsmAI	GTCTC	4 cut(s)	46, 378, 569, 1149
BsmBI	CGTCTC	1 cut(s)	1149
BsmFI	GGGAC	2 cut(s)	112, 950
BsmI	GAATGC	2 cut(s)	18, 1366
BsnI	GGCC	3 cut(s)	1198, 1309, 1373
Bso31I	GGTCTC	2 cut(s)	46, 378
BsoBI	CYCGRG	1 cut(s)	1825
Bsp1286I	GDGCHC	2 cut(s)	1302, 1786
Bsp1407I	TGTACA	2 cut(s)	762, 1005
Bsp143I	GATC	2 cut(s)	673, 1525
Bsp19I	CCATGG	3 cut(s)	515, 570, 1374
BspACI	CCGC	2 cut(s)	740, 1499
BspANI	GGCC	3 cut(s)	1198, 1309, 1373
BspCNI	CTCAG	6 cut(s)	53, 338, 388, 402, 640, 1567
BspFNI	CGCG	1 cut(s)	1160
BspHI	TCATGA	1 cut(s)	1786
BspLI	GGNNCC	1 cut(s)	1807
BspMAI	CTGCAG	1 cut(s)	1714
BspMI	ACCTGC	1 cut(s)	105
BspQI	GCTCTTC	1 cut(s)	430
BspTNI	GGTCTC	2 cut(s)	46, 378
BsrDI	GCAATG	3 cut(s)	670, 1032, 1338
BsrFI	RCCGGY	1 cut(s)	1979
BsrGI	TGTACA	2 cut(s)	762, 1005
BsrI	ACTGG	4 cut(s)	12, 548, 775, 2016
BssAI	RCCGGY	1 cut(s)	1979
BssECI	CCNNGG	5 cut(s)	515, 570, 1246, 1374, 1825
BssMI	GATC	2 cut(s)	673, 1525
BssNI	GRCGYC	1 cut(s)	1082
BssSI	CACGAG	2 cut(s)	1634, 1775
BssT1I	CCWWGG	4 cut(s)	515, 570, 1246, 1374
Bst2BI	CACGAG	2 cut(s)	1634, 1775
Bst2UI	CCWGG	1 cut(s)	1047
Bst4CI	ACNGT	5 cut(s)	31, 419, 1304, 1446, 1548
Bst6I	CTCTTC	4 cut(s)	430, 1902, 1941, 2064
BstACI	GRCGYC	1 cut(s)	1082
BstAUI	TGTACA	2 cut(s)	762, 1005
BstC8I	GCNNGC	3 cut(s)	645, 1409, 1611
BstDEI	CTNAG	8 cut(s)	40, 325, 375, 389, 648, 848, 1266, 1575
BstDSI	CCRYGG	3 cut(s)	515, 570, 1374
BstEII	GGTNACC	1 cut(s)	1627
BstF5I	GGATG	7 cut(s)	765, 817, 1185, 1264, 1585, 1699, 1920
BstFNI	CGCG	1 cut(s)	1160
BstH2I	RGCGCY	2 cut(s)	355, 1955
BstHHI	GCGC	4 cut(s)	354, 1120, 1954, 2134
BstKTI	GATC	2 cut(s)	676, 1528
BstMAI	GTCTC	4 cut(s)	46, 378, 569, 1149
BstMBI	GATC	2 cut(s)	673, 1525
BstMWI	GCNNNNNNNGC	8 cut(s)	443, 628, 1148, 1157, 1297, 1306, 1370, 1898
BstNI	CCWGG	1 cut(s)	1047
BstNSI	RCATGY	1 cut(s)	535
BstPI	GGTNACC	1 cut(s)	1627
BstSCI	CCNGG	3 cut(s)	1045, 1824, 1825
BstSFI	CTRYAG	2 cut(s)	1303, 1710
BstUI	CGCG	1 cut(s)	1160
BstV1I	GCAGC	8 cut(s)	433, 961, 1415, 1618, 1779, 1901, 1941, 2035
BstV2I	GAAGAC	3 cut(s)	530, 1112, 1732
Bsu36I	CCTNAGG	2 cut(s)	375, 389
BsuRI	GGCC	3 cut(s)	1198, 1309, 1373
BtgI	CCRYGG	3 cut(s)	515, 570, 1374
BtsCI	GGATG	7 cut(s)	765, 817, 1185, 1264, 1585, 1699, 1920
BtsI	GCAGTG	3 cut(s)	1707, 1896, 2142
BtsIMutI	CAGTG	6 cut(s)	27, 1300, 1451, 1707, 1896, 2142
BveI	ACCTGC	1 cut(s)	105
Cac8I	GCNNGC	3 cut(s)	645, 1409, 1611
CaiI	CAGNNNCTG	1 cut(s)	562
CciI	TCATGA	1 cut(s)	1786
CfoI	GCGC	4 cut(s)	354, 1120, 1954, 2134
Cfr10I	RCCGGY	1 cut(s)	1979
Cfr13I	GGNCC	2 cut(s)	117, 720
Cfr9I	CCCGGG	1 cut(s)	1825
CseI	GACGC	2 cut(s)	1071, 1166
Csp6I	GTAC	3 cut(s)	763, 1006, 1822
CspAI	ACCGGT	1 cut(s)	1979
CspCI	CAANNNNNGTGG	2 cut(s)	400, 435
CviQI	GTAC	3 cut(s)	763, 1006, 1822
DdeI	CTNAG	8 cut(s)	40, 325, 375, 389, 648, 848, 1266, 1575
DpnI	GATC	2 cut(s)	675, 1527
DpnII	GATC	2 cut(s)	673, 1525
Eam1104I	CTCTTC	4 cut(s)	430, 1902, 1941, 2064
EarI	CTCTTC	4 cut(s)	430, 1902, 1941, 2064
Ecl136II	GAGCTC	1 cut(s)	1784
Eco130I	CCWWGG	4 cut(s)	515, 570, 1246, 1374
Eco24I	GRGCYC	1 cut(s)	1786
Eco31I	GGTCTC	2 cut(s)	46, 378
Eco47I	GGWCC	2 cut(s)	117, 720
Eco47III	AGCGCT	1 cut(s)	353
Eco53kI	GAGCTC	1 cut(s)	1784
Eco57I	CTGAAG	1 cut(s)	1640
Eco81I	CCTNAGG	2 cut(s)	375, 389
Eco88I	CYCGRG	1 cut(s)	1825
Eco91I	GGTNACC	1 cut(s)	1627
EcoICRI	GAGCTC	1 cut(s)	1784
EcoO65I	GGTNACC	1 cut(s)	1627
EcoRI	GAATTC	1 cut(s)	1685
EcoRII	CCWGG	1 cut(s)	1045
EcoT14I	CCWWGG	4 cut(s)	515, 570, 1246, 1374
EcoT38I	GRGCYC	1 cut(s)	1786
ErhI	CCWWGG	4 cut(s)	515, 570, 1246, 1374
Esp3I	CGTCTC	1 cut(s)	1149
FaqI	GGGAC	2 cut(s)	112, 950
Fnu4HI	GCNGC	8 cut(s)	447, 975, 1429, 1607, 1793, 1890, 1955, 2049
FokI	GGATG	7 cut(s)	772, 824, 1192, 1271, 1592, 1706, 1927
FriOI	GRGCYC	1 cut(s)	1786
Fsp4HI	GCNGC	8 cut(s)	447, 975, 1429, 1607, 1793, 1890, 1955, 2049
FspBI	CTAG	4 cut(s)	873, 1056, 1152, 1802
GlaI	GCGC	4 cut(s)	353, 1119, 1953, 2133
GluI	GCNGC	8 cut(s)	447, 975, 1429, 1607, 1793, 1890, 1955, 2049
GsaI	CCCAGC	2 cut(s)	311, 936
GsuI	CTGGAG	2 cut(s)	129, 323
HaeII	RGCGCY	2 cut(s)	355, 1955
HaeIII	GGCC	3 cut(s)	1198, 1309, 1373
HapII	CCGG	3 cut(s)	1310, 1826, 1980
HgaI	GACGC	2 cut(s)	1071, 1166
HhaI	GCGC	4 cut(s)	354, 1120, 1954, 2134
Hin1I	GRCGYC	1 cut(s)	1082
Hin6I	GCGC	4 cut(s)	352, 1118, 1952, 2132
HinP1I	GCGC	4 cut(s)	352, 1118, 1952, 2132
HincII	GTYRAC	1 cut(s)	304
HindII	GTYRAC	1 cut(s)	304
HindIII	AAGCTT	2 cut(s)	435, 725
HinfI	GANTC	4 cut(s)	99, 496, 1485, 1718
HpaII	CCGG	3 cut(s)	1310, 1826, 1980
HphI	GGTGA	8 cut(s)	63, 94, 147, 586, 670, 802, 938, 1484
Hpy166II	GTNNAC	7 cut(s)	34, 120, 304, 882, 1006, 1544, 1832
Hpy188I	TCNGA	6 cut(s)	43, 220, 383, 495, 1297, 1620
Hpy188III	TCNNGA	9 cut(s)	146, 340, 431, 452, 550, 677, 1636, 1722, 1787
Hpy8I	GTNNAC	7 cut(s)	34, 120, 304, 882, 1006, 1544, 1832
Hpy99I	CGWCG	2 cut(s)	700, 1087
HpyAV	CCTTC	7 cut(s)	260, 500, 826, 1027, 1132, 1396, 1741
HpyCH4III	ACNGT	5 cut(s)	31, 419, 1304, 1446, 1548
HpyCH4IV	ACGT	1 cut(s)	1013
HpyF10VI	GCNNNNNNNGC	8 cut(s)	443, 628, 1148, 1157, 1297, 1306, 1370, 1898
HpyF3I	CTNAG	8 cut(s)	40, 325, 375, 389, 648, 848, 1266, 1575
HpySE526I	ACGT	1 cut(s)	1013
Hsp92I	GRCGYC	1 cut(s)	1082
HspAI	GCGC	4 cut(s)	352, 1118, 1952, 2132
Kzo9I	GATC	2 cut(s)	673, 1525
LguI	GCTCTTC	1 cut(s)	430
LmnI	GCTCC	1 cut(s)	640
Lsp1109I	GCAGC	8 cut(s)	433, 961, 1415, 1618, 1779, 1901, 1941, 2035
LweI	GCATC	2 cut(s)	768, 1420
MaeI	CTAG	4 cut(s)	873, 1056, 1152, 1802
MaeII	ACGT	1 cut(s)	1013
MaeIII	GTNAC	5 cut(s)	592, 790, 1322, 1627, 1872
MalI	GATC	2 cut(s)	675, 1527
MboI	GATC	2 cut(s)	673, 1525
MfeI	CAATTG	1 cut(s)	1738
MhlI	GDGCHC	2 cut(s)	1302, 1786
MluCI	AATT	5 cut(s)	824, 994, 1685, 1738, 1997
MluI	ACGCGT	1 cut(s)	1158
MlyI	GAGTC	1 cut(s)	1494
MmeI	TCCRAC	1 cut(s)	1143
MroXI	GAANNNNTTC	1 cut(s)	563
MseI	TTAA	5 cut(s)	1125, 1491, 1515, 1677, 2149
MslI	CAYNNNNRTG	2 cut(s)	1331, 1416
MspA1I	CMGCKG	1 cut(s)	631
MspI	CCGG	3 cut(s)	1310, 1826, 1980
MspR9I	CCNGG	3 cut(s)	1047, 1826, 1827
MunI	CAATTG	1 cut(s)	1738
Mva1269I	GAATGC	2 cut(s)	18, 1366
MvaI	CCWGG	1 cut(s)	1047
MvnI	CGCG	1 cut(s)	1160
MwoI	GCNNNNNNNGC	8 cut(s)	443, 628, 1148, 1157, 1297, 1306, 1370, 1898
NciI	CCSGG	2 cut(s)	1826, 1827
NcoI	CCATGG	3 cut(s)	515, 570, 1374
NdeII	GATC	2 cut(s)	673, 1525
NlaIV	GGNNCC	1 cut(s)	1807
NmuCI	GTSAC	3 cut(s)	592, 790, 1872
NspI	RCATGY	1 cut(s)	535
PagI	TCATGA	1 cut(s)	1786
PciI	ACATGT	1 cut(s)	531
PciSI	GCTCTTC	1 cut(s)	430
PctI	GAATGC	2 cut(s)	18, 1366
PdmI	GAANNNNTTC	1 cut(s)	563
PfeI	GAWTC	3 cut(s)	99, 496, 1718
PinAI	ACCGGT	1 cut(s)	1979
PkrI	GCNGC	8 cut(s)	448, 976, 1430, 1608, 1794, 1891, 1956, 2050
PleI	GAGTC	1 cut(s)	1493
PpsI	GAGTC	1 cut(s)	1493
PscI	ACATGT	1 cut(s)	531
Psp124BI	GAGCTC	1 cut(s)	1786
Psp6I	CCWGG	1 cut(s)	1045
PspEI	GGTNACC	1 cut(s)	1627
PspFI	CCCAGC	2 cut(s)	307, 932
PspGI	CCWGG	1 cut(s)	1045
PspN4I	GGNNCC	1 cut(s)	1807
PspPI	GGNCC	2 cut(s)	117, 720
PstI	CTGCAG	1 cut(s)	1714
PstNI	CAGNNNCTG	1 cut(s)	562
PvuII	CAGCTG	1 cut(s)	631
RsaI	GTAC	3 cut(s)	764, 1007, 1823
RsaNI	GTAC	3 cut(s)	763, 1006, 1822
RseI	CAYNNNNRTG	2 cut(s)	1331, 1416
SacI	GAGCTC	1 cut(s)	1786
SapI	GCTCTTC	1 cut(s)	430
SaqAI	TTAA	5 cut(s)	1125, 1491, 1515, 1677, 2149
SatI	GCNGC	8 cut(s)	447, 975, 1429, 1607, 1793, 1890, 1955, 2049
Sau3AI	GATC	2 cut(s)	673, 1525
Sau96I	GGNCC	2 cut(s)	117, 720
SchI	GAGTC	1 cut(s)	1494
ScrFI	CCNGG	3 cut(s)	1047, 1826, 1827
SduI	GDGCHC	2 cut(s)	1302, 1786
SfaNI	GCATC	2 cut(s)	768, 1420
SfcI	CTRYAG	2 cut(s)	1303, 1710
SinI	GGWCC	2 cut(s)	117, 720
SmaI	CCCGGG	1 cut(s)	1827
SmiMI	CAYNNNNRTG	2 cut(s)	1331, 1416
SmlI	CTYRAG	3 cut(s)	227, 429, 2004
SmoI	CTYRAG	3 cut(s)	227, 429, 2004
Sse9I	AATT	5 cut(s)	824, 994, 1685, 1738, 1997
SsiI	CCGC	2 cut(s)	740, 1499
SspMI	CTAG	4 cut(s)	873, 1056, 1152, 1802
SstI	GAGCTC	1 cut(s)	1786
StyD4I	CCNGG	3 cut(s)	1045, 1824, 1825
StyI	CCWWGG	4 cut(s)	515, 570, 1246, 1374
TaaI	ACNGT	5 cut(s)	31, 419, 1304, 1446, 1548
TaiI	ACGT	1 cut(s)	1016
TaqI	TCGA	4 cut(s)	695, 732, 1187, 1483
TasI	AATT	5 cut(s)	824, 994, 1685, 1738, 1997
TatI	WGTACW	2 cut(s)	762, 1005
TfiI	GAWTC	3 cut(s)	99, 496, 1718
Tru1I	TTAA	5 cut(s)	1125, 1491, 1515, 1677, 2149
Tru9I	TTAA	5 cut(s)	1125, 1491, 1515, 1677, 2149
TscAI	CASTG	6 cut(s)	34, 1307, 1451, 1714, 1903, 2149
TseFI	GTSAC	3 cut(s)	592, 790, 1872
TseI	GCWGC	8 cut(s)	446, 974, 1428, 1606, 1792, 1889, 1954, 2048
Tsp45I	GTSAC	3 cut(s)	592, 790, 1872
TspDTI	ATGAA	5 cut(s)	614, 1198, 1301, 1587, 2010
TspGWI	ACGGA	2 cut(s)	895, 1192
TspMI	CCCGGG	1 cut(s)	1825
TspRI	CASTG	6 cut(s)	34, 1307, 1451, 1714, 1903, 2149
VpaK11BI	GGWCC	2 cut(s)	117, 720
XapI	RAATTY	3 cut(s)	994, 1685, 1997
XceI	RCATGY	1 cut(s)	535
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1621
XmaI	CCCGGG	1 cut(s)	1825
XmnI	GAANNNNTTC	1 cut(s)	563
XspI	CTAG	4 cut(s)	873, 1056, 1152, 1802

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.