Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0012456

Physical Location & Seq

Genomic Coordinates Forward (+)

4486277 .. 4488971

Gene Structure 2695 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G040700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2175 bp

ATGGCTGCTACTTCTGCTGTCCATTTTACTGTGAATTCCTCAGAAACAAAGAGACCCATCTTCTTCACTTCGCCGTTTAGACAAATTCCAACCAAAAGATTCAACCTTTCTTGCAGGTCCACCAAGTCTCCTCCAAAATCTCCACCAGATTTAGCAGAACCCAACAGCAAGAACAACAACAAGAAGAACGACGACAACAACAACAAAAAAAACCCATCTTTATCTTTGTCTGAGCAACTCCAGCCTCTAACCTCAACCACTCTCTCCAACCCTCCCAAAGACCAATCCCAATTGCTTTCCAAGCCGAAGTCCATTTGGGTGAACCCCGCCAAGCCCAAACGCTCTGTGCTCTCTCTGCAGAGGCAGAAACGGTCACTTTACTCTTACAATCCTCAGGTGAGAGATCTCAGGCAGTTTGCTCATAAGCTCAATGATTGTGATGCCTCTCAAAATGCTTTCTTGGCTGCTCTTGAAGAAATCCCACACCCACCCACTAGGGAAAATGCGCTTTTGATACTCAATAGCTTGAAGCCATGGCAGAAAACCCATATGTTCTTCAATTGGGTGAAGGCCCAGAATTCATTTCCCATGGATACCATATTCTACAATGTCACAATGAAGTCTTTGAGGTTTGGGAGGCAGTTTCAACTCATTGAAGAGCTTGCTGAGGAGATGGTAAGCAATGAGATTGAGCTTGATAACATTACTTACTCCACTATAATTACTTGTGCCAAGAGGTCCAAGCTTTTTGACAAGGCAGTGGAGTGGTTTGAGAGGATGTACAAGACTGGTTTAATGCCTGATGAGGTGACTTACTCTGCTATTTTAGATGTTTATGCCAAATTGGGAAAGGTTGAGGAGGTTCTTAGTTTATATGAGAGAGGGAGAGCTAGTGGGTGGAAACCAGACCCCATTGCATTTTCTGTCTTGGGTAAGATGTTTGGTGAGGCTGGGGACTATGATGGCATTAGGTATGTCTTGCAGGAAATGGCTGCTCTTGGTGTGCAGCCTAATTTGGTTGTGTACAATACTTTGTTAGAGGCAATGGGCAAGGCTGGAAAGCCTGGTTTAGCAAGAAGCTTATTCGAAGAAATGGTGGGATCTGGGCTGAAACCAAATGAGAAAACATTGACAGCGCTTGTTAAGATCTATGGCAAGGCTAGGTGGGCTCGAGATGCTTTGGAATTATGGGAACGAATGAGGTCGAACGAGTGGCCTATGGACTTCATTTTGTATAACACATTGTTGAATATGTGTGCTGACCTTGGTTTGGAGGAGGAAGCTAAGAAGCTTTTCGAGGATATGAAGCAGTCGGAGCATTGTAGGCCGGACAGTTGGAGTTACACGGCAATGTTGAACATTTTTGGGAGTGGAGGGAATGTTGATGGGGCAATGGGGTTGTTTGAAGAAATGTCTGAGTTGGGGATTGAGCTGAATGTCATGGGGTGCACTTGTTTGATTCAGTGCTTGGGGAAAGCTAGAAGATTCAGCGATATGGTTCGAGTCTTTGGTGTTGCAGTTGAAAGAGGGGTTAAACCAGATGATAGGCTTTGTGGGTGCTTACTGTCCGTTGTGTCATTGTGTGAAAAAACGGAGGATGAGGATAAGGTCCTCTCTTGTTTGCAGCAGGCTAATCCCAAGTTGGTTACCCTTGTCAAAGTGCTGCAAGATAAGAAACTTGGGTTTGAGACAATTAAAGATGAGTTCAGGGATGTTATTAGTGGCACGTCGGTTGAATCCCGGAGACCCTTCTGTAATTGCTTGATAGATATATGCAGAAACAAAAACAACCATGAGAGAGCTCATGAGTTGCTCTATCTGGGAACCCTATACGGGTTGTATCCAGGTTTACACAACAAGACTTCGAGGGAGTGGTGTTTGGATGTTAGGTCACTGTCCATTGGTGCAGCTCACACTGCACTTGAAGAGTGGATGGGAACACTCTACAAAATTGTTCAGCGTGAGGAGGCGTTGCCGGAGTTGTTTTCAGCCCAAACGGGTACGGGAACACACAAGTTCTCTCAAGGGCTGGCTCATTCCTTTGCTTCTCATGTGGAGAAATTGGCTGCACCATTTAGAAAAAGTGAAGAGAAAGCTGGTCGTTTTGTGGCGACCAGGGAGGATTTAGTATCTTGGGTGCAGTCACAGGCTCCATCTACAGCCATCACAGCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

725

Amino Acids

81.7

Weight (kDa)

8.31

Isoelectric Point (pI)

46.49

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012456)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G46580
fragaria_vesca	FvH4_5g21640
malus_domestica	MD06G1031400.v1.1 MD16G1277300.v1.1
prunus_persica	Prupe.5G040700_v2.0.a1
pyrus_communis	pycom06g02620 pycom16g24660
rosa_chinensis	RchiOBHm_Chr7g0209101
rosa_laevigata	RLG00000003167
rosa_multiflora	Rmu_co8470613.1_g000001 Rmu_sc0000821.1_g000010 Rmu_sc0009521.1_g000001
rosa_roxburghii	Rroxscaffold_3G00249750
rosa_rugosa	Rorug07G0109100
rosa_samantha	Rh7AG243500 Rh7BG238600 Rh7CG258700 Rh7DG250500
rosa_wichuraiana	Rw7G020640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	105
AciI	CCGC	1 cut(s)	327
AclWI	GGATC	1 cut(s)	1108
AcsI	RAATTY	3 cut(s)	34, 84, 577
AfaI	GTAC	3 cut(s)	782, 1025, 2002
AfeI	AGCGCT	1 cut(s)	1137
AfiI	CCNNNNNNNGG	2 cut(s)	1270, 1833
AjiI	CACGTC	1 cut(s)	1728
AjnI	CCWGG	3 cut(s)	1063, 1843, 2114
Alw21I	GWGCWC	3 cut(s)	351, 1451, 1804
Alw26I	GTCTC	4 cut(s)	46, 132, 1682, 1738
Alw44I	GTGCAC	1 cut(s)	1447
AlwI	GGATC	1 cut(s)	1108
Ama87I	CYCGRG	1 cut(s)	1170
Aor51HI	AGCGCT	1 cut(s)	1137
AoxI	GGCC	3 cut(s)	570, 1214, 1325
ApaLI	GTGCAC	1 cut(s)	1447
ApeKI	GCWGC	8 cut(s)	5, 464, 992, 1006, 1624, 1663, 1907, 2066
ApoI	RAATTY	3 cut(s)	34, 84, 577
Asp700I	GAANNNNTTC	1 cut(s)	1292
AspLEI	GCGC	2 cut(s)	508, 1138
AspS9I	GGNCC	4 cut(s)	117, 571, 738, 1609
AsuC2I	CCSGG	1 cut(s)	1741
AsuHPI	GGTGA	5 cut(s)	331, 409, 577, 820, 956
AsuII	TTCGAA	1 cut(s)	1086
AvaI	CYCGRG	1 cut(s)	1170
AvaII	GGWCC	3 cut(s)	117, 738, 1609
AxyI	CCTNAGG	1 cut(s)	393
BaeGI	GKGCMC	1 cut(s)	1451
BanII	GRGCYC	2 cut(s)	1171, 1804
Bbv12I	GWGCWC	3 cut(s)	351, 1451, 1804
BbvCI	CCTCAGC	1 cut(s)	666
BbvI	GCAGC	7 cut(s)	451, 979, 1018, 1636, 1650, 1919, 2053
BccI	CCATC	8 cut(s)	65, 223, 667, 956, 1379, 1927, 2161, 2171
BceAI	ACGGC	2 cut(s)	58, 1362
BciT130I	CCWGG	3 cut(s)	1065, 1845, 2116
BciVI	GTATCC	2 cut(s)	586, 1851
BcnI	CCSGG	1 cut(s)	1741
BcoDI	GTCTC	4 cut(s)	46, 132, 1682, 1738
BfaI	CTAG	4 cut(s)	495, 891, 1161, 1479
BfmI	CTRYAG	2 cut(s)	356, 2157
BfoI	RGCGCY	1 cut(s)	1139
BfuAI	ACCTGC	1 cut(s)	105
BfuI	GTATCC	2 cut(s)	586, 1851
BglII	AGATCT	2 cut(s)	403, 1146
BisI	GCNGC	8 cut(s)	6, 465, 993, 1007, 1625, 1664, 1908, 2067
BlsI	GCNGC	8 cut(s)	7, 466, 994, 1008, 1626, 1665, 1909, 2068
Bme1390I	CCNGG	4 cut(s)	1065, 1741, 1845, 2116
Bme18I	GGWCC	3 cut(s)	117, 738, 1609
BmeT110I	CYCGRG	1 cut(s)	1170
BmgBI	CACGTC	1 cut(s)	1728
BmgT120I	GGNCC	4 cut(s)	117, 571, 738, 1609
BmiI	GGNNCC	2 cut(s)	1825, 2151
BmrFI	CCNGG	4 cut(s)	1065, 1741, 1845, 2116
BmsI	GCATC	2 cut(s)	430, 1165
BpmI	CTGGAG	1 cut(s)	224
Bpu10I	CCTNAGC	1 cut(s)	666
Bpu14I	TTCGAA	1 cut(s)	1086
BpuEI	CTTGAG	1 cut(s)	2007
BpuMI	CCSGG	1 cut(s)	1741
BsaI	GGTCTC	2 cut(s)	46, 1738
BsaJI	CCNNGG	4 cut(s)	533, 588, 1264, 2115
BsaXI	ACNNNNNCTCC	6 cut(s)	112, 142, 877, 907, 1365, 1395
Bsc4I	CCNNNNNNNGG	2 cut(s)	1270, 1833
Bse1I	ACTGG	1 cut(s)	793
Bse21I	CCTNAGG	1 cut(s)	393
Bse3DI	GCAATG	5 cut(s)	688, 912, 1050, 1356, 1398
BseBI	CCWGG	3 cut(s)	1065, 1845, 2116
BseDI	CCNNGG	4 cut(s)	533, 588, 1264, 2115
BseGI	GGATG	5 cut(s)	783, 1603, 1717, 1888, 1938
BseLI	CCNNNNNNNGG	2 cut(s)	1270, 1833
BseMI	GCAATG	5 cut(s)	688, 912, 1050, 1356, 1398
BseMII	CTCAG	6 cut(s)	54, 222, 407, 421, 657, 1407
BseNI	ACTGG	1 cut(s)	793
BseRI	GAGGAG	5 cut(s)	120, 683, 872, 1289, 1979
BseSI	GKGCMC	1 cut(s)	1451
BseXI	GCAGC	7 cut(s)	451, 979, 1018, 1636, 1650, 1919, 2053
BseYI	CCCAGC	1 cut(s)	950
BsgI	GTGCAG	5 cut(s)	1025, 1902, 1926, 2052, 2159
BshFI	GGCC	3 cut(s)	572, 1216, 1327
BsiHKAI	GWGCWC	3 cut(s)	351, 1451, 1804
BsiHKCI	CYCGRG	1 cut(s)	1170
BsiSI	CCGG	3 cut(s)	1328, 1741, 1976
BslFI	GGGAC	1 cut(s)	968
BslI	CCNNNNNNNGG	2 cut(s)	1270, 1833
BsmAI	GTCTC	4 cut(s)	46, 132, 1682, 1738
BsmFI	GGGAC	1 cut(s)	968
BsnI	GGCC	3 cut(s)	572, 1216, 1327
Bso31I	GGTCTC	2 cut(s)	46, 1738
BsoBI	CYCGRG	1 cut(s)	1170
Bsp119I	TTCGAA	1 cut(s)	1086
Bsp1286I	GDGCHC	4 cut(s)	351, 1171, 1451, 1804
Bsp1407I	TGTACA	2 cut(s)	780, 1023
Bsp143I	GATC	3 cut(s)	403, 1100, 1146
Bsp19I	CCATGG	2 cut(s)	533, 588
BspACI	CCGC	1 cut(s)	327
BspANI	GGCC	3 cut(s)	572, 1216, 1327
BspCNI	CTCAG	6 cut(s)	53, 223, 406, 420, 658, 1408
BspHI	TCATGA	1 cut(s)	1804
BspLI	GGNNCC	2 cut(s)	1825, 2151
BspMAI	CTGCAG	1 cut(s)	360
BspMI	ACCTGC	1 cut(s)	105
BspPI	GGATC	1 cut(s)	1108
BspQI	GCTCTTC	1 cut(s)	651
BspT104I	TTCGAA	1 cut(s)	1086
BspTNI	GGTCTC	2 cut(s)	46, 1738
BsrDI	GCAATG	5 cut(s)	688, 912, 1050, 1356, 1398
BsrGI	TGTACA	2 cut(s)	780, 1023
BsrI	ACTGG	1 cut(s)	793
BssECI	CCNNGG	4 cut(s)	533, 588, 1264, 2115
BssMI	GATC	3 cut(s)	403, 1100, 1146
BssT1I	CCWWGG	3 cut(s)	533, 588, 1264
Bst2UI	CCWGG	3 cut(s)	1065, 1845, 2116
Bst4CI	ACNGT	5 cut(s)	31, 372, 1334, 1566, 1896
Bst6I	CTCTTC	3 cut(s)	651, 1920, 2082
BstAUI	TGTACA	2 cut(s)	780, 1023
BstBI	TTCGAA	1 cut(s)	1086
BstC8I	GCNNGC	3 cut(s)	663, 1629, 2031
BstDEI	CTNAG	9 cut(s)	40, 231, 393, 407, 666, 866, 1284, 1416, 2172
BstDSI	CCRYGG	2 cut(s)	533, 588
BstEII	GGTNACC	1 cut(s)	1645
BstF5I	GGATG	5 cut(s)	783, 1603, 1717, 1888, 1938
BstH2I	RGCGCY	1 cut(s)	1139
BstHHI	GCGC	2 cut(s)	508, 1138
BstKTI	GATC	3 cut(s)	406, 1103, 1149
BstMAI	GTCTC	4 cut(s)	46, 132, 1682, 1738
BstMBI	GATC	3 cut(s)	403, 1100, 1146
BstNI	CCWGG	3 cut(s)	1065, 1845, 2116
BstPI	GGTNACC	1 cut(s)	1645
BstSCI	CCNGG	4 cut(s)	1063, 1739, 1843, 2114
BstSFI	CTRYAG	2 cut(s)	356, 2157
BstSLI	GKGCMC	1 cut(s)	1451
BstV1I	GCAGC	7 cut(s)	451, 979, 1018, 1636, 1650, 1919, 2053
BstX2I	RGATCY	3 cut(s)	403, 1100, 1146
BstYI	RGATCY	3 cut(s)	403, 1100, 1146
Bsu36I	CCTNAGG	1 cut(s)	393
BsuI	GTATCC	2 cut(s)	586, 1851
BsuRI	GGCC	3 cut(s)	572, 1216, 1327
BtgI	CCRYGG	2 cut(s)	533, 588
BtrI	CACGTC	1 cut(s)	1728
BtsCI	GGATG	5 cut(s)	783, 1603, 1717, 1888, 1938
BtsI	GCAGTG	2 cut(s)	765, 1914
BtsIMutI	CAGTG	4 cut(s)	765, 1469, 1892, 1914
BveI	ACCTGC	1 cut(s)	105
Cac8I	GCNNGC	3 cut(s)	663, 1629, 2031
CciI	TCATGA	1 cut(s)	1804
CfoI	GCGC	2 cut(s)	508, 1138
Cfr13I	GGNCC	4 cut(s)	117, 571, 738, 1609
Csp6I	GTAC	3 cut(s)	781, 1024, 2001
CviAII	CATG	6 cut(s)	534, 589, 1441, 1793, 1805, 2051
CviQI	GTAC	3 cut(s)	781, 1024, 2001
DdeI	CTNAG	9 cut(s)	40, 231, 393, 407, 666, 866, 1284, 1416, 2172
DpnI	GATC	3 cut(s)	405, 1102, 1148
DpnII	GATC	3 cut(s)	403, 1100, 1146
Eam1104I	CTCTTC	3 cut(s)	651, 1920, 2082
EarI	CTCTTC	3 cut(s)	651, 1920, 2082
Ecl136II	GAGCTC	1 cut(s)	1802
Eco130I	CCWWGG	3 cut(s)	533, 588, 1264
Eco24I	GRGCYC	2 cut(s)	1171, 1804
Eco31I	GGTCTC	2 cut(s)	46, 1738
Eco47I	GGWCC	3 cut(s)	117, 738, 1609
Eco47III	AGCGCT	1 cut(s)	1137
Eco53kI	GAGCTC	1 cut(s)	1802
Eco81I	CCTNAGG	1 cut(s)	393
Eco88I	CYCGRG	1 cut(s)	1170
Eco91I	GGTNACC	1 cut(s)	1645
EcoICRI	GAGCTC	1 cut(s)	1802
EcoO109I	RGGNCCY	1 cut(s)	1609
EcoO65I	GGTNACC	1 cut(s)	1645
EcoRI	GAATTC	2 cut(s)	34, 577
EcoRII	CCWGG	3 cut(s)	1063, 1843, 2114
EcoT14I	CCWWGG	3 cut(s)	533, 588, 1264
EcoT38I	GRGCYC	2 cut(s)	1171, 1804
ErhI	CCWWGG	3 cut(s)	533, 588, 1264
FaeI	CATG	6 cut(s)	537, 592, 1444, 1796, 1808, 2054
FaqI	GGGAC	1 cut(s)	968
FatI	CATG	6 cut(s)	533, 588, 1440, 1792, 1804, 2050
FauI	CCCGC	1 cut(s)	334
FauNDI	CATATG	1 cut(s)	549
Fnu4HI	GCNGC	8 cut(s)	6, 465, 993, 1007, 1625, 1664, 1908, 2067
FokI	GGATG	5 cut(s)	790, 1610, 1724, 1895, 1945
FriOI	GRGCYC	2 cut(s)	1171, 1804
Fsp4HI	GCNGC	8 cut(s)	6, 465, 993, 1007, 1625, 1664, 1908, 2067
FspBI	CTAG	4 cut(s)	495, 891, 1161, 1479
GlaI	GCGC	2 cut(s)	507, 1137
GluI	GCNGC	8 cut(s)	6, 465, 993, 1007, 1625, 1664, 1908, 2067
GsaI	CCCAGC	1 cut(s)	954
GsuI	CTGGAG	1 cut(s)	224
HaeII	RGCGCY	1 cut(s)	1139
HaeIII	GGCC	3 cut(s)	572, 1216, 1327
HapII	CCGG	3 cut(s)	1328, 1741, 1976
HhaI	GCGC	2 cut(s)	508, 1138
Hin1II	CATG	6 cut(s)	537, 592, 1444, 1796, 1808, 2054
Hin6I	GCGC	2 cut(s)	506, 1136
HinP1I	GCGC	2 cut(s)	506, 1136
HindIII	AAGCTT	3 cut(s)	743, 1078, 1289
HinfI	GANTC	5 cut(s)	99, 1459, 1485, 1503, 1736
HpaII	CCGG	3 cut(s)	1328, 1741, 1976
HphI	GGTGA	5 cut(s)	331, 409, 577, 820, 956
Hpy166II	GTNNAC	5 cut(s)	120, 322, 1024, 1449, 1850
Hpy188I	TCNGA	4 cut(s)	43, 232, 1315, 1417
Hpy188III	TCNNGA	3 cut(s)	470, 1172, 1805
Hpy8I	GTNNAC	5 cut(s)	120, 322, 1024, 1449, 1850
Hpy99I	CGWCG	2 cut(s)	194, 1732
HpyAV	CCTTC	2 cut(s)	562, 1759
HpyCH4III	ACNGT	5 cut(s)	31, 372, 1334, 1566, 1896
HpyCH4IV	ACGT	1 cut(s)	1727
HpyF3I	CTNAG	9 cut(s)	40, 231, 393, 407, 666, 866, 1284, 1416, 2172
HpySE526I	ACGT	1 cut(s)	1727
Hsp92II	CATG	6 cut(s)	537, 592, 1444, 1796, 1808, 2054
HspAI	GCGC	2 cut(s)	506, 1136
Kzo9I	GATC	3 cut(s)	403, 1100, 1146
LguI	GCTCTTC	1 cut(s)	651
LmnI	GCTCC	2 cut(s)	1315, 2155
Lsp1109I	GCAGC	7 cut(s)	451, 979, 1018, 1636, 1650, 1919, 2053
LweI	GCATC	2 cut(s)	430, 1165
MaeI	CTAG	4 cut(s)	495, 891, 1161, 1479
MaeII	ACGT	1 cut(s)	1727
MaeIII	GTNAC	7 cut(s)	372, 610, 808, 1340, 1645, 1890, 2142
MalI	GATC	3 cut(s)	405, 1102, 1148
MboI	GATC	3 cut(s)	403, 1100, 1146
MfeI	CAATTG	2 cut(s)	290, 559
MflI	RGATCY	3 cut(s)	403, 1100, 1146
MhlI	GDGCHC	4 cut(s)	351, 1171, 1451, 1804
MlyI	GAGTC	1 cut(s)	1512
MmeI	TCCRAC	4 cut(s)	113, 291, 1293, 1316
MroXI	GAANNNNTTC	1 cut(s)	1292
MseI	TTAA	4 cut(s)	794, 1143, 1533, 1695
MslI	CAYNNNNRTG	2 cut(s)	317, 1349
MspI	CCGG	3 cut(s)	1328, 1741, 1976
MspR9I	CCNGG	4 cut(s)	1065, 1741, 1845, 2116
MunI	CAATTG	2 cut(s)	290, 559
MvaI	CCWGG	3 cut(s)	1065, 1845, 2116
NciI	CCSGG	1 cut(s)	1741
NcoI	CCATGG	2 cut(s)	533, 588
NdeI	CATATG	1 cut(s)	549
NdeII	GATC	3 cut(s)	403, 1100, 1146
NlaIII	CATG	6 cut(s)	537, 592, 1444, 1796, 1808, 2054
NlaIV	GGNNCC	2 cut(s)	1825, 2151
NmuCI	GTSAC	5 cut(s)	372, 610, 808, 1890, 2142
NspV	TTCGAA	1 cut(s)	1086
PaeR7I	CTCGAG	1 cut(s)	1170
PagI	TCATGA	1 cut(s)	1804
PciSI	GCTCTTC	1 cut(s)	651
PdmI	GAANNNNTTC	1 cut(s)	1292
PfeI	GAWTC	4 cut(s)	99, 1459, 1485, 1736
PfoI	TCCNGGA	1 cut(s)	1739
PkrI	GCNGC	8 cut(s)	7, 466, 994, 1008, 1626, 1665, 1909, 2068
PleI	GAGTC	1 cut(s)	1511
PpsI	GAGTC	1 cut(s)	1511
PpuMI	RGGWCCY	1 cut(s)	1609
Psp124BI	GAGCTC	1 cut(s)	1804
Psp5II	RGGWCCY	1 cut(s)	1609
Psp6I	CCWGG	3 cut(s)	1063, 1843, 2114
PspEI	GGTNACC	1 cut(s)	1645
PspFI	CCCAGC	1 cut(s)	950
PspGI	CCWGG	3 cut(s)	1063, 1843, 2114
PspN4I	GGNNCC	2 cut(s)	1825, 2151
PspPI	GGNCC	4 cut(s)	117, 571, 738, 1609
PspPPI	RGGWCCY	1 cut(s)	1609
PstI	CTGCAG	1 cut(s)	360
PsuI	RGATCY	3 cut(s)	403, 1100, 1146
RsaI	GTAC	3 cut(s)	782, 1025, 2002
RsaNI	GTAC	3 cut(s)	781, 1024, 2001
RseI	CAYNNNNRTG	2 cut(s)	317, 1349
SacI	GAGCTC	1 cut(s)	1804
SapI	GCTCTTC	1 cut(s)	651
SaqAI	TTAA	4 cut(s)	794, 1143, 1533, 1695
SatI	GCNGC	8 cut(s)	6, 465, 993, 1007, 1625, 1664, 1908, 2067
Sau3AI	GATC	3 cut(s)	403, 1100, 1146
Sau96I	GGNCC	4 cut(s)	117, 571, 738, 1609
SchI	GAGTC	1 cut(s)	1512
ScrFI	CCNGG	4 cut(s)	1065, 1741, 1845, 2116
SduI	GDGCHC	4 cut(s)	351, 1171, 1451, 1804
SfaNI	GCATC	2 cut(s)	430, 1165
SfcI	CTRYAG	2 cut(s)	356, 2157
Sfr274I	CTCGAG	1 cut(s)	1170
SfuI	TTCGAA	1 cut(s)	1086
SinI	GGWCC	3 cut(s)	117, 738, 1609
SlaI	CTCGAG	1 cut(s)	1170
SmiMI	CAYNNNNRTG	2 cut(s)	317, 1349
SmlI	CTYRAG	2 cut(s)	1170, 2022
SmoI	CTYRAG	2 cut(s)	1170, 2022
SsiI	CCGC	1 cut(s)	327
SspMI	CTAG	4 cut(s)	495, 891, 1161, 1479
SstI	GAGCTC	1 cut(s)	1804
StyD4I	CCNGG	4 cut(s)	1063, 1739, 1843, 2114
StyI	CCWWGG	3 cut(s)	533, 588, 1264
TaaI	ACNGT	5 cut(s)	31, 372, 1334, 1566, 1896
TaiI	ACGT	1 cut(s)	1730
TaqI	TCGA	6 cut(s)	1086, 1171, 1205, 1296, 1501, 1865
TatI	WGTACW	2 cut(s)	780, 1023
TfiI	GAWTC	4 cut(s)	99, 1459, 1485, 1736
Tru1I	TTAA	4 cut(s)	794, 1143, 1533, 1695
Tru9I	TTAA	4 cut(s)	794, 1143, 1533, 1695
TscAI	CASTG	4 cut(s)	765, 1469, 1899, 1921
TseFI	GTSAC	5 cut(s)	372, 610, 808, 1890, 2142
TseI	GCWGC	8 cut(s)	5, 464, 992, 1006, 1624, 1663, 1907, 2066
Tsp45I	GTSAC	5 cut(s)	372, 610, 808, 1890, 2142
TspDTI	ATGAA	4 cut(s)	570, 632, 1216, 1319
TspGWI	ACGGA	2 cut(s)	1558, 1607
TspRI	CASTG	4 cut(s)	765, 1469, 1899, 1921
VneI	GTGCAC	1 cut(s)	1447
VpaK11BI	GGWCC	3 cut(s)	117, 738, 1609
XapI	RAATTY	3 cut(s)	34, 84, 577
XhoI	CTCGAG	1 cut(s)	1170
XmnI	GAANNNNTTC	1 cut(s)	1292
XspI	CTAG	4 cut(s)	495, 891, 1161, 1479

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.