Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G46580 |
| fragaria_vesca | FvH4_5g21640 |
| malus_domestica | MD06G1031400.v1.1 MD16G1277300.v1.1 |
| prunus_persica | Prupe.5G040700_v2.0.a1 |
| pyrus_communis | pycom06g02620 pycom16g24660 |
| rosa_chinensis | RchiOBHm_Chr7g0209101 |
| rosa_laevigata | RLG00000003167 |
| rosa_multiflora | Rmu_co8470613.1_g000001 Rmu_sc0000821.1_g000010 Rmu_sc0009521.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00249750 |
| rosa_rugosa | Rorug07G0109100 |
| rosa_samantha | Rh7AG243500 Rh7BG238600 Rh7CG258700 Rh7DG250500 |
| rosa_wichuraiana | Rw7G020640 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 201 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 19 |
| AgeI | ACCGGT | 1 cut(s) | 183 |
| AgsI | TTSAA | 1 cut(s) | 111 |
| AluBI | AGCT | 1 cut(s) | 282 |
| AluI | AGCT | 1 cut(s) | 282 |
| Ama87I | CYCGRG | 1 cut(s) | 301 |
| AoxI | GGCC | 1 cut(s) | 217 |
| ApeKI | GCWGC | 3 cut(s) | 93, 143, 252 |
| ApoI | RAATTY | 1 cut(s) | 201 |
| AsiGI | ACCGGT | 1 cut(s) | 183 |
| AspS9I | GGNCC | 1 cut(s) | 218 |
| AsuC2I | CCSGG | 1 cut(s) | 31 |
| AvaI | CYCGRG | 1 cut(s) | 301 |
| BbvI | GCAGC | 3 cut(s) | 80, 155, 239 |
| BccI | CCATC | 1 cut(s) | 113 |
| BciVI | GTATCC | 1 cut(s) | 37 |
| BcnI | CCSGG | 1 cut(s) | 31 |
| BfaI | CTAG | 1 cut(s) | 6 |
| BfuI | GTATCC | 1 cut(s) | 37 |
| BisI | GCNGC | 3 cut(s) | 94, 144, 253 |
| BlsI | GCNGC | 3 cut(s) | 95, 145, 254 |
| Bme1390I | CCNGG | 1 cut(s) | 31 |
| BmeT110I | CYCGRG | 1 cut(s) | 301 |
| BmgT120I | GGNCC | 1 cut(s) | 218 |
| BmiI | GGNNCC | 1 cut(s) | 11 |
| BmrFI | CCNGG | 1 cut(s) | 31 |
| BpuEI | CTTGAG | 1 cut(s) | 193 |
| BpuMI | CCSGG | 1 cut(s) | 31 |
| BsaWI | WCCGGW | 1 cut(s) | 183 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 19 |
| Bse118I | RCCGGY | 1 cut(s) | 183 |
| Bse1I | ACTGG | 1 cut(s) | 220 |
| BseGI | GGATG | 1 cut(s) | 124 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 19 |
| BseNI | ACTGG | 1 cut(s) | 220 |
| BseXI | GCAGC | 3 cut(s) | 80, 155, 239 |
| BsgI | GTGCAG | 4 cut(s) | 88, 162, 238, 345 |
| BshFI | GGCC | 1 cut(s) | 219 |
| BshTI | ACCGGT | 1 cut(s) | 183 |
| BsiHKCI | CYCGRG | 1 cut(s) | 301 |
| BsiSI | CCGG | 2 cut(s) | 30, 184 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 19 |
| BsnI | GGCC | 1 cut(s) | 219 |
| BsoBI | CYCGRG | 1 cut(s) | 301 |
| BspANI | GGCC | 1 cut(s) | 219 |
| BspLI | GGNNCC | 1 cut(s) | 11 |
| BsrFI | RCCGGY | 1 cut(s) | 183 |
| BsrI | ACTGG | 1 cut(s) | 220 |
| BssAI | RCCGGY | 1 cut(s) | 183 |
| Bst6I | CTCTTC | 3 cut(s) | 106, 145, 268 |
| BstF5I | GGATG | 1 cut(s) | 124 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 102 |
| BstSCI | CCNGG | 1 cut(s) | 29 |
| BstV1I | GCAGC | 3 cut(s) | 80, 155, 239 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 228 |
| BsuI | GTATCC | 1 cut(s) | 37 |
| BsuRI | GGCC | 1 cut(s) | 219 |
| BtsCI | GGATG | 1 cut(s) | 124 |
| BtsI | GCAGTG | 3 cut(s) | 100, 156, 346 |
| BtsIMutI | CAGTG | 3 cut(s) | 100, 156, 346 |
| Cfr10I | RCCGGY | 1 cut(s) | 183 |
| Cfr13I | GGNCC | 1 cut(s) | 218 |
| CspAI | ACCGGT | 1 cut(s) | 183 |
| CviAII | CATG | 1 cut(s) | 237 |
| CviJI | RGCY | 3 cut(s) | 219, 252, 282 |
| CviKI_1 | RGCY | 3 cut(s) | 219, 252, 282 |
| Eam1104I | CTCTTC | 3 cut(s) | 106, 145, 268 |
| EarI | CTCTTC | 3 cut(s) | 106, 145, 268 |
| Eco88I | CYCGRG | 1 cut(s) | 301 |
| FaeI | CATG | 1 cut(s) | 240 |
| FaiI | YATR | 4 cut(s) | 17, 19, 131, 238 |
| FatI | CATG | 1 cut(s) | 236 |
| Fnu4HI | GCNGC | 3 cut(s) | 94, 144, 253 |
| FokI | GGATG | 1 cut(s) | 131 |
| Fsp4HI | GCNGC | 3 cut(s) | 94, 144, 253 |
| FspBI | CTAG | 1 cut(s) | 6 |
| GluI | GCNGC | 3 cut(s) | 94, 144, 253 |
| HaeIII | GGCC | 1 cut(s) | 219 |
| HapII | CCGG | 2 cut(s) | 30, 184 |
| Hin1II | CATG | 1 cut(s) | 240 |
| HpaII | CCGG | 2 cut(s) | 30, 184 |
| Hpy166II | GTNNAC | 1 cut(s) | 36 |
| Hpy188III | TCNNGA | 1 cut(s) | 303 |
| Hpy8I | GTNNAC | 1 cut(s) | 36 |
| HpyCH4V | TGCA | 4 cut(s) | 105, 143, 255, 326 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 102 |
| Hsp92II | CATG | 1 cut(s) | 240 |
| LpnPI | CCDG | 6 cut(s) | 43, 175, 197, 201, 268, 318 |
| Lsp1109I | GCAGC | 3 cut(s) | 80, 155, 239 |
| MaeI | CTAG | 1 cut(s) | 6 |
| MaeIII | GTNAC | 2 cut(s) | 76, 328 |
| MboII | GAAGA | 4 cut(s) | 123, 162, 254, 285 |
| MluCI | AATT | 2 cut(s) | 136, 201 |
| MnlI | CCTC | 2 cut(s) | 146, 299 |
| MseI | TTAA | 1 cut(s) | 353 |
| MspI | CCGG | 2 cut(s) | 30, 184 |
| MspR9I | CCNGG | 1 cut(s) | 31 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 102 |
| NciI | CCSGG | 1 cut(s) | 31 |
| NlaIII | CATG | 1 cut(s) | 240 |
| NlaIV | GGNNCC | 1 cut(s) | 11 |
| NmuCI | GTSAC | 2 cut(s) | 76, 328 |
| PinAI | ACCGGT | 1 cut(s) | 183 |
| PkrI | GCNGC | 3 cut(s) | 95, 145, 254 |
| PspN4I | GGNNCC | 1 cut(s) | 11 |
| PspPI | GGNCC | 1 cut(s) | 218 |
| SaqAI | TTAA | 1 cut(s) | 353 |
| SatI | GCNGC | 3 cut(s) | 94, 144, 253 |
| Sau96I | GGNCC | 1 cut(s) | 218 |
| ScrFI | CCNGG | 1 cut(s) | 31 |
| SetI | ASST | 2 cut(s) | 78, 284 |
| SmlI | CTYRAG | 1 cut(s) | 208 |
| SmoI | CTYRAG | 1 cut(s) | 208 |
| Sse9I | AATT | 2 cut(s) | 136, 201 |
| SspMI | CTAG | 1 cut(s) | 6 |
| StyD4I | CCNGG | 1 cut(s) | 29 |
| TasI | AATT | 2 cut(s) | 136, 201 |
| Tru1I | TTAA | 1 cut(s) | 353 |
| Tru9I | TTAA | 1 cut(s) | 353 |
| TscAI | CASTG | 3 cut(s) | 107, 163, 353 |
| TseFI | GTSAC | 2 cut(s) | 76, 328 |
| TseI | GCWGC | 3 cut(s) | 93, 143, 252 |
| Tsp45I | GTSAC | 2 cut(s) | 76, 328 |
| TspDTI | ATGAA | 1 cut(s) | 214 |
| TspRI | CASTG | 3 cut(s) | 107, 163, 353 |
| XapI | RAATTY | 1 cut(s) | 201 |
| XspI | CTAG | 1 cut(s) | 6 |