Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0006898

Physical Location & Seq

Genomic Coordinates Reverse (-)

18926180 .. 18929009

Gene Structure 2830 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g27720.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1605 bp

ATGGACCCGAAAGCCGTGAAGTCCGACCTTGTTCTCATCCTCGACTACGGCTCCCAATACACCCACCTCATCACCCGCCGCATCCGCTCCCTCTCCGTCTTCTCCCTCACCATCTCCGGCACCAGCCCCCTCAAGGCCATCACCGACCTCAACCCCTCCGTCGTCATCCTCTCCGGCGGGCCCCACTCCGTCCACACCGACGACTCCCCCAGCTTCCCCGGCGGCTTCGCGGAGTGGGCCGAGGCCAACGGCGTCTTCGTCCTCGGAATCTGCTACGGGCTTCAGCTGATTGTGCAGCGCCTCGGCGGGGTCGTTAGGGTTGGGGAGAAGCAGGAGTATGGCAAGATGGAGATGGTGGTGGAGAAGAATTCCGGGATTTTCGGGTCCAAGAGTGTTGGGGATAGGCAGGTTGTGTGGATGAGCCATGGGGATGAGGTGGCTCAGCTGCCGGAGGGATTCGAGGTGGTTGCGCAGAGCCAGCAGGGAGTGGTGGCCGCCATCGAAAGCCCGGCTAGGAGGTTCTATGGGCTGCAGTACCACCCTGAGGTGACACATTCTCCAGGAGGGATGGAGACACTTAGGTACTTCCTGTTTGATGTTTGTGGAGTCAGCGCAGGATGGAAGATGGAAAACGTAATGGAGGAAGAAATTAAAGTGATAAATAGCACAGTGGCGCCCGAAGATCACGTCATATGCGCATTATCTGGAGGTGTTGATTCCACGGTGGCCGCAACTCTTGTTCATAAGGCTATTGGGGATAGGCTTCATTGTATCTTTGTTGACAATGGTTTGTTGAGATACAAGGAGCAAGAACGTGTGATGGAAACCTTTGAGAAAGATCTTCATTTGCCTGTCACTTGTGTGGATGCCTCAGAACAGTTTCTTAGTAAGCTCAAAGGGGTTACTGATCCTGAGGTGAAAAGGAAAATAATAGGAAAAGAGTTCATCTGCATTTTTGATGCTTTTGCACATGAACTTGAGAAAAAGTTAGGGAGGAAACCCGCTTACTTGGTCCAAGGTACCCTGTATCCGGATGTGATTGAATCTTGTCCACCACCTGGTAGTGGAAGGACTCATTCCCACACAATCAAGAGCCATCATAACGTTGGCGGGCTTCCCAAGGACATGAAATTAAAGCTTATTGAACCACTTAAACTTCTATTCAAGGATGAGGTTCGCCAATTGGGGAAGATCTTGAATGTTCCTCAGGGATTCCTAAAGCGCCATCCATTTCCGGGGCCTGGCCTTGCTGTAAGAGTCTTGGGTGATGTAACTGCAGGCAATGCTTTAGAAGTCCTCCGCCAGGTTGACGAGATATTTATACAATCAATCAAAGATGCTGGGTTATATGATGAAATTTGGCAAGCATTTGCAGTGTTTCTGCCTGTAAGATCAGTGGGAGTTCAAGGTGATCAAAGAACACATTCTCATGTTGTTACTCTCAGAGCTGTAACAAGTCAAGATGGGATGACAGCCGAATGGTACTACTTTACACGTGAGTTCTATGATGATGTGTCACGGAAGATTTGCAATAGTGTCCGTGGTGTAAACAGAGTAACCTATGACATTACATCTAAGCCACCTTCAACTATTGAGTGGGAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003921 GO:0003922 GO:0006139 GO:0006163 GO:0006164 GO:0006177 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009116 GO:0009117 GO:0009119 GO:0009123 GO:0009124 GO:0009126 GO:0009127 GO:0009150 GO:0009152 GO:0009156 GO:0009161 GO:0009163 GO:0009165 GO:0009167 GO:0009168 GO:0009259 GO:0009260 GO:0009987 GO:0016874 GO:0016879 GO:0016884 GO:0018130 GO:0019438 GO:0019637 GO:0019693 GO:0034404 GO:0034641 GO:0034654 GO:0042278 GO:0042451 GO:0042455 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0046037 GO:0046128 GO:0046129 GO:0046390 GO:0046483 GO:0055086 GO:0071704 GO:0072521 GO:0072522 GO:0090407 GO:1901068 GO:1901070 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901657 GO:1901659

KEGG Pathways

Metabolic & Signaling

ko00230 ko00983 ko01100 map00230 map00983 map01100

Pfam Domains

Protein Families

GATase GMP_synt_C NAD_synthase

Protein Analysis

535

Amino Acids

59.13

Weight (kDa)

6.16

Isoelectric Point (pI)

42.68

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GATase	PF00117	12 - 199	2.5e-36	Glutamine amidotransferase class-I
Peptidase_C26	PF07722	82 - 182	1.4e-09	Peptidase C26
GMP_synt_C	PF00958	443 - 497	9.2e-21	GMP synthase C terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006898)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G63660 AT1G63660
fragaria_vesca	FvH4_5g27720 FvH4_5g27720
malus_domestica	MD06G1084500.v1.1 MD14G1105600.v1.1
prunus_persica	Prupe.5G100800_v2.0.a1
pyrus_communis	pycom06g08080 pycom14g10110
rosa_chinensis	RchiOBHm_Chr1g0356411 RchiOBHm_Chr7g0219471
rosa_laevigata	RLG00000002288 RLG00000005808 RLG00000011737
rosa_multiflora	Rmu_sc0003767.1_g000005 Rmu_sc0012443.1_g000008
rosa_roxburghii	Rroxscaffold_3G00240030 Rroxscaffold_5G00385240 Rroxscaffold_6G00391170
rosa_rugosa	Rorug07G0185400
rosa_samantha	Rh4DG422800 Rh7BG318200 Rh7CG345600 Rh7DG324200
rosa_wichuraiana	Rw1G013280 Rw7G027730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	2 cut(s)	471, 697
Acc36I	ACCTGC	1 cut(s)	397
Acc65I	GGTACC	1 cut(s)	1019
AccB1I	GGYRCC	3 cut(s)	119, 673, 1019
AccB7I	CCANNNNNTGG	1 cut(s)	1058
AccBSI	CCGCTC	1 cut(s)	87
AccII	CGCG	1 cut(s)	230
AccIII	TCCGGA	1 cut(s)	1030
AclI	AACGTT	1 cut(s)	1104
AclWI	GGATC	1 cut(s)	902
AcoI	YGGCCR	2 cut(s)	492, 726
AcsI	RAATTY	2 cut(s)	367, 1356
AcuI	CTGAAG	1 cut(s)	266
AcvI	CACGTG	1 cut(s)	1496
AcyI	GRCGYC	2 cut(s)	252, 674
AfaI	GTAC	4 cut(s)	536, 584, 1021, 1484
AfiI	CCNNNNNNNGG	9 cut(s)	133, 307, 544, 1030, 1058, 1064, 1235, 1241, 1303
AflIII	ACRYGT	2 cut(s)	814, 1493
AgsI	TTSAA	6 cut(s)	1043, 1145, 1165, 1198, 1406, 1587
AjiI	CACGTC	1 cut(s)	688
AjnI	CCWGG	4 cut(s)	559, 1057, 1240, 1302
AjuI	GAANNNNNNNTTGG	2 cut(s)	239, 271
AleI	CACNNNNGTG	1 cut(s)	860
AluBI	AGCT	6 cut(s)	213, 286, 445, 892, 1138, 1448
AluI	AGCT	6 cut(s)	213, 286, 445, 892, 1138, 1448
Alw26I	GTCTC	1 cut(s)	566
AlwI	GGATC	1 cut(s)	902
Aor13HI	TCCGGA	1 cut(s)	1030
AoxI	GGCC	8 cut(s)	135, 179, 237, 243, 492, 726, 1238, 1243
ApaI	GGGCCC	1 cut(s)	183
ApeKI	GCWGC	3 cut(s)	295, 445, 529
ApoI	RAATTY	2 cut(s)	367, 1356
ArsI	GACNNNNNNTTYG	2 cut(s)	672, 704
Asp700I	GAANNNNTTC	2 cut(s)	879, 1423
Asp718I	GGTACC	1 cut(s)	1019
AspLEI	GCGC	6 cut(s)	300, 472, 614, 676, 698, 1224
AspS9I	GGNCC	7 cut(s)	4, 179, 180, 237, 384, 1012, 1238
AsuC2I	CCSGG	4 cut(s)	219, 373, 509, 1236
AsuHPI	GGTGA	7 cut(s)	64, 100, 133, 559, 928, 1277, 1421
AvaII	GGWCC	3 cut(s)	4, 384, 1012
AxyI	CCTNAGG	3 cut(s)	543, 912, 1206
BaeGI	GKGCMC	1 cut(s)	183
BanI	GGYRCC	3 cut(s)	119, 673, 1019
BanII	GRGCYC	1 cut(s)	183
BbrPI	CACGTG	1 cut(s)	1496
BbsI	GAAGAC	2 cut(s)	91, 247
BbvI	GCAGC	3 cut(s)	307, 432, 516
BceAI	ACGGC	2 cut(s)	64, 265
BcgI	CGANNNNNNTGC	2 cut(s)	449, 483
BciT130I	CCWGG	4 cut(s)	561, 1059, 1242, 1304
BciVI	GTATCC	1 cut(s)	1038
BclI	TGATCA	1 cut(s)	1411
BcnI	CCSGG	4 cut(s)	219, 373, 509, 1236
BcoDI	GTCTC	1 cut(s)	566
BfaI	CTAG	1 cut(s)	513
BfmI	CTRYAG	2 cut(s)	530, 1275
BfoI	RGCGCY	3 cut(s)	301, 677, 1225
BfuAI	ACCTGC	1 cut(s)	397
BfuI	GTATCC	1 cut(s)	1038
BglII	AGATCT	2 cut(s)	838, 1191
BisI	GCNGC	7 cut(s)	79, 223, 296, 446, 495, 530, 729
BlpI	GCTNAGC	1 cut(s)	441
BlsI	GCNGC	7 cut(s)	80, 224, 297, 447, 496, 531, 730
Bme1390I	CCNGG	8 cut(s)	219, 373, 509, 561, 1059, 1236, 1242, 1304
Bme18I	GGWCC	3 cut(s)	4, 384, 1012
BmgBI	CACGTC	1 cut(s)	688
BmgT120I	GGNCC	7 cut(s)	4, 179, 180, 237, 384, 1012, 1238
BmiI	GGNNCC	9 cut(s)	6, 52, 121, 181, 182, 385, 675, 1021, 1239
BmrFI	CCNGG	8 cut(s)	219, 373, 509, 561, 1059, 1236, 1242, 1304
BmsI	GCATC	4 cut(s)	90, 856, 949, 1327
BpiI	GAAGAC	2 cut(s)	91, 247
BpmI	CTGGAG	2 cut(s)	543, 726
Bpu1102I	GCTNAGC	1 cut(s)	441
BpuEI	CTTGAG	2 cut(s)	116, 998
BpuMI	CCSGG	4 cut(s)	219, 373, 509, 1236
BsaAI	YACGTR	1 cut(s)	1496
BsaHI	GRCGYC	2 cut(s)	252, 674
BsaWI	WCCGGW	1 cut(s)	1030
BsaXI	ACNNNNNCTCC	4 cut(s)	35, 65, 541, 571
Bsc4I	CCNNNNNNNGG	9 cut(s)	133, 307, 544, 1030, 1058, 1064, 1235, 1241, 1303
Bse21I	CCTNAGG	3 cut(s)	543, 912, 1206
Bse3DI	GCAATG	1 cut(s)	1288
BseAI	TCCGGA	1 cut(s)	1030
BseBI	CCWGG	4 cut(s)	561, 1059, 1242, 1304
BseLI	CCNNNNNNNGG	9 cut(s)	133, 307, 544, 1030, 1058, 1064, 1235, 1241, 1303
BseMI	GCAATG	1 cut(s)	1288
BseMII	CTCAG	6 cut(s)	455, 534, 885, 903, 1220, 1456
BseSI	GKGCMC	1 cut(s)	183
BseXI	GCAGC	3 cut(s)	307, 432, 516
BseYI	CCCAGC	2 cut(s)	209, 1340
BsgI	GTGCAG	1 cut(s)	314
Bsh1236I	CGCG	1 cut(s)	230
BshFI	GGCC	8 cut(s)	137, 181, 239, 245, 494, 728, 1240, 1245
BshNI	GGYRCC	3 cut(s)	119, 673, 1019
BsiSI	CCGG	8 cut(s)	117, 174, 219, 372, 449, 509, 1031, 1235
BslI	CCNNNNNNNGG	9 cut(s)	133, 307, 544, 1030, 1058, 1064, 1235, 1241, 1303
BsmAI	GTCTC	1 cut(s)	566
BsnI	GGCC	8 cut(s)	137, 181, 239, 245, 494, 728, 1240, 1245
Bsp120I	GGGCCC	1 cut(s)	179
Bsp1286I	GDGCHC	1 cut(s)	183
Bsp13I	TCCGGA	1 cut(s)	1030
Bsp143I	GATC	6 cut(s)	682, 838, 907, 1191, 1391, 1411
Bsp1720I	GCTNAGC	1 cut(s)	441
Bsp19I	CCATGG	1 cut(s)	424
BspANI	GGCC	8 cut(s)	137, 181, 239, 245, 494, 728, 1240, 1245
BspCNI	CTCAG	6 cut(s)	454, 535, 884, 904, 1219, 1455
BspEI	TCCGGA	1 cut(s)	1030
BspFNI	CGCG	1 cut(s)	230
BspLI	GGNNCC	9 cut(s)	6, 52, 121, 181, 182, 385, 675, 1021, 1239
BspMAI	CTGCAG	2 cut(s)	534, 1279
BspMI	ACCTGC	1 cut(s)	397
BspPI	GGATC	1 cut(s)	902
BspT107I	GGYRCC	3 cut(s)	119, 673, 1019
BsrBI	CCGCTC	1 cut(s)	87
BsrDI	GCAATG	1 cut(s)	1288
BssMI	GATC	6 cut(s)	682, 838, 907, 1191, 1391, 1411
BssNI	GRCGYC	2 cut(s)	252, 674
BssT1I	CCWWGG	3 cut(s)	424, 1015, 1119
Bst2UI	CCWGG	4 cut(s)	561, 1059, 1242, 1304
Bst4CI	ACNGT	3 cut(s)	670, 724, 879
BstACI	GRCGYC	2 cut(s)	252, 674
BstAPI	GCANNNNNTGC	1 cut(s)	1283
BstBAI	YACGTR	1 cut(s)	1496
BstC8I	GCNNGC	5 cut(s)	179, 479, 1112, 1279, 1365
BstDEI	CTNAG	9 cut(s)	441, 543, 578, 871, 884, 912, 1206, 1442, 1575
BstDSI	CCRYGG	3 cut(s)	424, 720, 1540
BstENI	CCTNNNNNAGG	1 cut(s)	1301
BstFNI	CGCG	1 cut(s)	230
BstH2I	RGCGCY	3 cut(s)	301, 677, 1225
BstHHI	GCGC	6 cut(s)	300, 472, 614, 676, 698, 1224
BstKTI	GATC	6 cut(s)	685, 841, 910, 1194, 1394, 1414
BstMAI	GTCTC	1 cut(s)	566
BstMBI	GATC	6 cut(s)	682, 838, 907, 1191, 1391, 1411
BstMWI	GCNNNNNNNGC	6 cut(s)	84, 219, 236, 292, 478, 1283
BstNI	CCWGG	4 cut(s)	561, 1059, 1242, 1304
BstSCI	CCNGG	8 cut(s)	217, 371, 507, 559, 1057, 1234, 1240, 1302
BstSFI	CTRYAG	2 cut(s)	530, 1275
BstSLI	GKGCMC	1 cut(s)	183
BstUI	CGCG	1 cut(s)	230
BstV1I	GCAGC	3 cut(s)	307, 432, 516
BstV2I	GAAGAC	2 cut(s)	91, 247
BstX2I	RGATCY	2 cut(s)	838, 1191
BstYI	RGATCY	2 cut(s)	838, 1191
Bsu36I	CCTNAGG	3 cut(s)	543, 912, 1206
BsuI	GTATCC	1 cut(s)	1038
BsuRI	GGCC	8 cut(s)	137, 181, 239, 245, 494, 728, 1240, 1245
BtgI	CCRYGG	3 cut(s)	424, 720, 1540
BtrI	CACGTC	1 cut(s)	688
BtsI	GCAGTG	1 cut(s)	1380
BtsIMutI	CAGTG	3 cut(s)	675, 1380, 1401
BveI	ACCTGC	1 cut(s)	397
Cac8I	GCNNGC	5 cut(s)	179, 479, 1112, 1279, 1365
CfoI	GCGC	6 cut(s)	300, 472, 614, 676, 698, 1224
Cfr13I	GGNCC	7 cut(s)	4, 179, 180, 237, 384, 1012, 1238
CseI	GACGC	1 cut(s)	241
CsiI	ACCWGGT	1 cut(s)	1057
Csp6I	GTAC	4 cut(s)	535, 583, 1020, 1483
CviAII	CATG	4 cut(s)	425, 971, 1126, 1430
CviQI	GTAC	4 cut(s)	535, 583, 1020, 1483
DdeI	CTNAG	9 cut(s)	441, 543, 578, 871, 884, 912, 1206, 1442, 1575
DinI	GGCGCC	1 cut(s)	675
DpnI	GATC	6 cut(s)	684, 840, 909, 1193, 1393, 1413
DpnII	GATC	6 cut(s)	682, 838, 907, 1191, 1391, 1411
EaeI	YGGCCR	2 cut(s)	492, 726
EciI	GGCGGA	1 cut(s)	1289
Eco130I	CCWWGG	3 cut(s)	424, 1015, 1119
Eco24I	GRGCYC	1 cut(s)	183
Eco47I	GGWCC	3 cut(s)	4, 384, 1012
Eco57I	CTGAAG	1 cut(s)	266
Eco72I	CACGTG	1 cut(s)	1496
Eco81I	CCTNAGG	3 cut(s)	543, 912, 1206
EcoNI	CCTNNNNNAGG	1 cut(s)	1301
EcoO109I	RGGNCCY	2 cut(s)	180, 1238
EcoRI	GAATTC	1 cut(s)	367
EcoRII	CCWGG	4 cut(s)	559, 1057, 1240, 1302
EcoT14I	CCWWGG	3 cut(s)	424, 1015, 1119
EcoT38I	GRGCYC	1 cut(s)	183
EgeI	GGCGCC	1 cut(s)	675
EheI	GGCGCC	1 cut(s)	675
ErhI	CCWWGG	3 cut(s)	424, 1015, 1119
FaeI	CATG	4 cut(s)	428, 974, 1129, 1433
FatI	CATG	4 cut(s)	424, 970, 1125, 1429
FauI	CCCGC	5 cut(s)	83, 170, 299, 1009, 1103
FauNDI	CATATG	1 cut(s)	692
FbaI	TGATCA	1 cut(s)	1411
Fnu4HI	GCNGC	7 cut(s)	79, 223, 296, 446, 495, 530, 729
FriOI	GRGCYC	1 cut(s)	183
Fsp4HI	GCNGC	7 cut(s)	79, 223, 296, 446, 495, 530, 729
FspAI	RTGCGCAY	1 cut(s)	697
FspBI	CTAG	1 cut(s)	513
FspI	TGCGCA	2 cut(s)	471, 697
GlaI	GCGC	6 cut(s)	299, 471, 613, 675, 697, 1223
GluI	GCNGC	7 cut(s)	79, 223, 296, 446, 495, 530, 729
GsaI	CCCAGC	2 cut(s)	213, 1344
GsuI	CTGGAG	2 cut(s)	543, 726
HaeII	RGCGCY	3 cut(s)	301, 677, 1225
HaeIII	GGCC	8 cut(s)	137, 181, 239, 245, 494, 728, 1240, 1245
HapII	CCGG	8 cut(s)	117, 174, 219, 372, 449, 509, 1031, 1235
HgaI	GACGC	1 cut(s)	241
HhaI	GCGC	6 cut(s)	300, 472, 614, 676, 698, 1224
Hin1I	GRCGYC	2 cut(s)	252, 674
Hin1II	CATG	4 cut(s)	428, 974, 1129, 1433
Hin6I	GCGC	6 cut(s)	298, 470, 612, 674, 696, 1222
HinP1I	GCGC	6 cut(s)	298, 470, 612, 674, 696, 1222
HincII	GTYRAC	2 cut(s)	781, 1309
HindII	GTYRAC	2 cut(s)	781, 1309
HindIII	AAGCTT	1 cut(s)	1136
HinfI	GANTC	9 cut(s)	203, 267, 456, 606, 716, 1043, 1072, 1212, 1257
HpaII	CCGG	8 cut(s)	117, 174, 219, 372, 449, 509, 1031, 1235
HphI	GGTGA	7 cut(s)	64, 100, 133, 559, 928, 1277, 1421
Hpy166II	GTNNAC	5 cut(s)	193, 781, 1052, 1309, 1549
Hpy188I	TCNGA	4 cut(s)	25, 266, 874, 1445
Hpy188III	TCNNGA	6 cut(s)	705, 911, 1031, 1090, 1195, 1460
Hpy8I	GTNNAC	5 cut(s)	193, 781, 1052, 1309, 1549
Hpy99I	CGWCG	2 cut(s)	164, 203
HpyAV	CCTTC	2 cut(s)	1062, 1593
HpyCH4III	ACNGT	3 cut(s)	670, 724, 879
HpyCH4IV	ACGT	5 cut(s)	633, 687, 814, 1104, 1495
HpyCH4V	TGCA	7 cut(s)	295, 532, 951, 968, 1277, 1373, 1530
HpyF10VI	GCNNNNNNNGC	6 cut(s)	84, 219, 236, 292, 478, 1283
HpyF3I	CTNAG	9 cut(s)	441, 543, 578, 871, 884, 912, 1206, 1442, 1575
HpySE526I	ACGT	5 cut(s)	633, 687, 814, 1104, 1495
Hsp92I	GRCGYC	2 cut(s)	252, 674
Hsp92II	CATG	4 cut(s)	428, 974, 1129, 1433
HspAI	GCGC	6 cut(s)	298, 470, 612, 674, 696, 1222
KasI	GGCGCC	1 cut(s)	673
Kpn2I	TCCGGA	1 cut(s)	1030
KpnI	GGTACC	1 cut(s)	1023
Ksp22I	TGATCA	1 cut(s)	1411
Kzo9I	GATC	6 cut(s)	682, 838, 907, 1191, 1391, 1411
LmnI	GCTCC	3 cut(s)	56, 92, 805
Lsp1109I	GCAGC	3 cut(s)	307, 432, 516
LweI	GCATC	4 cut(s)	90, 856, 949, 1327
MabI	ACCWGGT	1 cut(s)	1057
MaeI	CTAG	1 cut(s)	513
MaeII	ACGT	5 cut(s)	633, 687, 814, 1104, 1495
MaeIII	GTNAC	8 cut(s)	547, 853, 901, 1270, 1435, 1450, 1515, 1555
MalI	GATC	6 cut(s)	684, 840, 909, 1193, 1393, 1413
MbiI	CCGCTC	1 cut(s)	87
MboI	GATC	6 cut(s)	682, 838, 907, 1191, 1391, 1411
MboII	GAAGA	9 cut(s)	91, 247, 376, 634, 656, 692, 833, 1201, 1534
MfeI	CAATTG	1 cut(s)	1181
MflI	RGATCY	2 cut(s)	838, 1191
MhlI	GDGCHC	1 cut(s)	183
MluCI	AATT	5 cut(s)	367, 648, 1130, 1181, 1356
Mly113I	GGCGCC	1 cut(s)	674
MlyI	GAGTC	4 cut(s)	197, 615, 1066, 1266
MmeI	TCCRAC	1 cut(s)	48
MroI	TCCGGA	1 cut(s)	1030
MroXI	GAANNNNTTC	2 cut(s)	879, 1423
MseI	TTAA	3 cut(s)	651, 1133, 1152
MslI	CAYNNNNRTG	3 cut(s)	429, 860, 1428
MspA1I	CMGCKG	2 cut(s)	286, 445
MspI	CCGG	8 cut(s)	117, 174, 219, 372, 449, 509, 1031, 1235
MspR9I	CCNGG	8 cut(s)	219, 373, 509, 561, 1059, 1236, 1242, 1304
MunI	CAATTG	1 cut(s)	1181
MvaI	CCWGG	4 cut(s)	561, 1059, 1242, 1304
MvnI	CGCG	1 cut(s)	230
MwoI	GCNNNNNNNGC	6 cut(s)	84, 219, 236, 292, 478, 1283
NarI	GGCGCC	1 cut(s)	674
NciI	CCSGG	4 cut(s)	219, 373, 509, 1236
NcoI	CCATGG	1 cut(s)	424
NdeI	CATATG	1 cut(s)	692
NdeII	GATC	6 cut(s)	682, 838, 907, 1191, 1391, 1411
NlaIII	CATG	4 cut(s)	428, 974, 1129, 1433
NlaIV	GGNNCC	9 cut(s)	6, 52, 121, 181, 182, 385, 675, 1021, 1239
NmeAIII	GCCGAG	2 cut(s)	265, 282
NmuCI	GTSAC	3 cut(s)	547, 853, 1515
NsbI	TGCGCA	2 cut(s)	471, 697
OliI	CACNNNNGTG	1 cut(s)	860
PcsI	WCGNNNNNNNCGW	2 cut(s)	255, 309
PdmI	GAANNNNTTC	2 cut(s)	879, 1423
PfeI	GAWTC	5 cut(s)	267, 456, 716, 1043, 1212
PflMI	CCANNNNNTGG	1 cut(s)	1058
PfoI	TCCNGGA	2 cut(s)	371, 559
PkrI	GCNGC	7 cut(s)	80, 224, 297, 447, 496, 531, 730
PleI	GAGTC	4 cut(s)	197, 614, 1066, 1265
PluTI	GGCGCC	1 cut(s)	677
PmaCI	CACGTG	1 cut(s)	1496
PmlI	CACGTG	1 cut(s)	1496
PpsI	GAGTC	4 cut(s)	197, 614, 1066, 1265
Ppu21I	YACGTR	1 cut(s)	1496
Psp1406I	AACGTT	1 cut(s)	1104
Psp6I	CCWGG	4 cut(s)	559, 1057, 1240, 1302
PspCI	CACGTG	1 cut(s)	1496
PspFI	CCCAGC	2 cut(s)	209, 1340
PspGI	CCWGG	4 cut(s)	559, 1057, 1240, 1302
PspN4I	GGNNCC	9 cut(s)	6, 52, 121, 181, 182, 385, 675, 1021, 1239
PspOMI	GGGCCC	1 cut(s)	179
PspPI	GGNCC	7 cut(s)	4, 179, 180, 237, 384, 1012, 1238
PstI	CTGCAG	2 cut(s)	534, 1279
PsuI	RGATCY	2 cut(s)	838, 1191
PvuII	CAGCTG	2 cut(s)	286, 445
RsaI	GTAC	4 cut(s)	536, 584, 1021, 1484
RsaNI	GTAC	4 cut(s)	535, 583, 1020, 1483
RseI	CAYNNNNRTG	3 cut(s)	429, 860, 1428
SaqAI	TTAA	3 cut(s)	651, 1133, 1152
SatI	GCNGC	7 cut(s)	79, 223, 296, 446, 495, 530, 729
Sau3AI	GATC	6 cut(s)	682, 838, 907, 1191, 1391, 1411
Sau96I	GGNCC	7 cut(s)	4, 179, 180, 237, 384, 1012, 1238
SchI	GAGTC	4 cut(s)	197, 615, 1066, 1266
ScrFI	CCNGG	8 cut(s)	219, 373, 509, 561, 1059, 1236, 1242, 1304
SduI	GDGCHC	1 cut(s)	183
SexAI	ACCWGGT	1 cut(s)	1057
SfaNI	GCATC	4 cut(s)	90, 856, 949, 1327
SfcI	CTRYAG	2 cut(s)	530, 1275
SfoI	GGCGCC	1 cut(s)	675
SinI	GGWCC	3 cut(s)	4, 384, 1012
SmiMI	CAYNNNNRTG	3 cut(s)	429, 860, 1428
SmlI	CTYRAG	2 cut(s)	131, 977
SmoI	CTYRAG	2 cut(s)	131, 977
Sse9I	AATT	5 cut(s)	367, 648, 1130, 1181, 1356
SspDI	GGCGCC	1 cut(s)	673
SspMI	CTAG	1 cut(s)	513
StyD4I	CCNGG	8 cut(s)	217, 371, 507, 559, 1057, 1234, 1240, 1302
StyI	CCWWGG	3 cut(s)	424, 1015, 1119
TaaI	ACNGT	3 cut(s)	670, 724, 879
TaiI	ACGT	5 cut(s)	636, 690, 817, 1107, 1498
TaqI	TCGA	3 cut(s)	42, 459, 501
TasI	AATT	5 cut(s)	367, 648, 1130, 1181, 1356
TauI	GCSGC	4 cut(s)	81, 225, 497, 731
TfiI	GAWTC	5 cut(s)	267, 456, 716, 1043, 1212
Tru1I	TTAA	3 cut(s)	651, 1133, 1152
Tru9I	TTAA	3 cut(s)	651, 1133, 1152
TscAI	CASTG	3 cut(s)	675, 1380, 1401
TseFI	GTSAC	3 cut(s)	547, 853, 1515
TseI	GCWGC	3 cut(s)	295, 445, 529
Tsp45I	GTSAC	3 cut(s)	547, 853, 1515
TspDTI	ATGAA	7 cut(s)	731, 755, 833, 934, 987, 1142, 1368
TspGWI	ACGGA	5 cut(s)	85, 148, 178, 1529, 1534
TspRI	CASTG	3 cut(s)	675, 1380, 1401
Van91I	CCANNNNNTGG	1 cut(s)	1058
VpaK11BI	GGWCC	3 cut(s)	4, 384, 1012
XagI	CCTNNNNNAGG	1 cut(s)	1301
XapI	RAATTY	2 cut(s)	367, 1356
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1103
XmnI	GAANNNNTTC	2 cut(s)	879, 1423
XspI	CTAG	1 cut(s)	513

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.