Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0006898

Physical Location & Seq

Genomic Coordinates Forward (+)

31472337 .. 31474950

Gene Structure 2614 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00240030.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1605 bp

ATGGACCCAAAAGCCGTGAAATCGGACCTGGTCCTCATTCTCGACTACGGCTCCCAATACACCCACCTCATCACTCGCCGCATCCGATCCCTCTCCGTCTTCTCCCTCACCATCTCCGGCACCAGCCCCCTCCAAACCATCACCGACCTCAACCCCCGCGTCGTCATCCTCTCCGGCGGGCCCCACTCCGTCCACACCGACGACTCCCCCAGCTTCCCGCCGGGCTTCACCGAGTGGGCCGAGGCCCACGGCGTCTTCGTCCTCGGAATCTGCTACGGCCTGCAGCTGATTGTGCAGCGGCTCGGCGGGGTGGTTAGGGTTGGGGAGAAGCAGGAGTATGGCAAGATGGAGATTGTGGTGGAGAGCAATTCCGGGGTTTTCGGGTCCAACAGGGTTGGGGACAGGCAGGTGGTGTGGATGAGCCATGGGGATGAGGTGGCCGAGCTGCCCCAGGGGTTCCGGGTGGTGGCCCAGAGCCAGCAGGGAGTGGTGGCCGCCATCGAATGCCCCGAAAGGAGGTTCTATGGGCTGCAGTACCACCCTGAGGTGACCCATTCGCCAGGAGGGATGGAGACACTTCGTTACTTCCTGTTTGATGTTTGTGGAGTCAGTGCAGGATGGAAGATGGAAAACGTAATGGAGGAAGAAATAAAAGTGATAAATAGCACAGTAGCGCCCGAAGATCACGTCATATGTGCATTATCAGGAGGTGTTGATTCCACAGTGGCCGCAACGCTCGTTCATAAGGCTATTGGTGATAGGCTTCATTGTATCTTTGTCGACAATGGTTTGTTGAGATATAAGGAGCAAGAACGTGTAATGGAAACCTTTGAGAAAGATCTTCATTTGCCTGTCACTTGTGTGGATGCCTCAGAACAATTTCTTAGTAAGCTTAAAGGTGTTGCTGATCCTGAGGTGAAAAGAAAAATAATAGGAAAAGAGTTCATCTGCATTTTCGATGATTTTGCACATGAACTTGAGAAAAAATTAGGTAGGAAACCTGCTTACTTAGTCCAAGGTACCCTGTATCCGGATGTGATTGAATCTTGTCCACCACCTGGAAGTGGAAGGACTCATTCCCACACAATCAAGAGCCATCATAATGTTGGCGGGCTTCCCAAGGACATGAAATTGAAGCTTATCGAACCACTTAAACTTCTATTCAAGGATGAGGTTCGCCAATTGGGGAAGATCTTGAATGTTCCTCTGGGATTCCTAAAGCGCCATCCATTTCCTGGGCCTGGCCTTGCCGTAAGAGTTTTGGGTGATGTGACTGCAGGCAATGCTTTAGAAGTCCTCCGCCAGGTTGACGAGATATTTATACAATCAATCAAAGATGCTGGCTTATATGATGAAATTTGGCAAGCATTTGCAGTGTTTCTGCCTGTAAGATCAGTTGGAGTTCAAGGTGATCAAAGGACACATTCTCATGTTGTTAGTCTTAGAGCTGTAACAAGTCAAGATGGCATGACAGCCGAATGGTACTACTTTACACATGAGTTCTATGATGATGTGTCACGGAAGATTTGCAATAGTGTCCGTGGTGTGAACAGAGTAGTTTATGACATTACATCAAAGCCTCCTTCAACTATCGAGTGGGAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003921 GO:0003922 GO:0006139 GO:0006163 GO:0006164 GO:0006177 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009116 GO:0009117 GO:0009119 GO:0009123 GO:0009124 GO:0009126 GO:0009127 GO:0009150 GO:0009152 GO:0009156 GO:0009161 GO:0009163 GO:0009165 GO:0009167 GO:0009168 GO:0009259 GO:0009260 GO:0009987 GO:0016874 GO:0016879 GO:0016884 GO:0018130 GO:0019438 GO:0019637 GO:0019693 GO:0034404 GO:0034641 GO:0034654 GO:0042278 GO:0042451 GO:0042455 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0046037 GO:0046128 GO:0046129 GO:0046390 GO:0046483 GO:0055086 GO:0071704 GO:0072521 GO:0072522 GO:0090407 GO:1901068 GO:1901070 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901657 GO:1901659

KEGG Pathways

Metabolic & Signaling

ko00230 ko00983 ko01100 map00230 map00983 map01100

Pfam Domains

Protein Families

GATase GMP_synt_C NAD_synthase

Protein Analysis

534

Amino Acids

59.37

Weight (kDa)

6.07

Isoelectric Point (pI)

43.76

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GATase	PF00117	12 - 199	5.7e-36	Glutamine amidotransferase class-I
Peptidase_C26	PF07722	82 - 182	2.8e-09	Peptidase C26
GMP_synt_C	PF00958	443 - 533	2.4e-41	GMP synthase C terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006898)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G63660 AT1G63660
fragaria_vesca	FvH4_5g27720 FvH4_5g27720
malus_domestica	MD06G1084500.v1.1 MD14G1105600.v1.1
prunus_persica	Prupe.5G100800_v2.0.a1
pyrus_communis	pycom06g08080 pycom14g10110
rosa_chinensis	RchiOBHm_Chr1g0356411 RchiOBHm_Chr7g0219471
rosa_laevigata	RLG00000002288 RLG00000005808 RLG00000011737
rosa_multiflora	Rmu_sc0003767.1_g000005 Rmu_sc0012443.1_g000008
rosa_roxburghii	Rroxscaffold_3G00240030 Rroxscaffold_5G00385240 Rroxscaffold_6G00391170
rosa_rugosa	Rorug07G0185400
rosa_samantha	Rh4DG422800 Rh7BG318200 Rh7CG345600 Rh7DG324200
rosa_wichuraiana	Rw1G013280 Rw7G027730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	397
Acc36I	ACCTGC	2 cut(s)	397, 1009
Acc65I	GGTACC	1 cut(s)	1019
AccB1I	GGYRCC	2 cut(s)	119, 1019
AccB7I	CCANNNNNTGG	2 cut(s)	1058, 1235
AccI	GTMKAC	1 cut(s)	780
AccII	CGCG	1 cut(s)	159
AccIII	TCCGGA	1 cut(s)	1030
AclWI	GGATC	2 cut(s)	81, 902
AcoI	YGGCCR	3 cut(s)	438, 492, 726
AcsI	RAATTY	1 cut(s)	1356
AcyI	GRCGYC	1 cut(s)	252
AdeI	CACNNNGTG	1 cut(s)	234
AfaI	GTAC	3 cut(s)	536, 1021, 1484
AfiI	CCNNNNNNNGG	9 cut(s)	466, 516, 544, 1030, 1058, 1064, 1235, 1241, 1303
AflIII	ACRYGT	1 cut(s)	814
AgsI	TTSAA	6 cut(s)	1043, 1135, 1165, 1198, 1406, 1587
AjiI	CACGTC	1 cut(s)	688
AjnI	CCWGG	7 cut(s)	27, 450, 559, 1057, 1234, 1240, 1302
AleI	CACNNNNGTG	1 cut(s)	860
AluBI	AGCT	6 cut(s)	213, 286, 445, 892, 1138, 1448
AluI	AGCT	6 cut(s)	213, 286, 445, 892, 1138, 1448
Alw26I	GTCTC	1 cut(s)	566
AlwI	GGATC	2 cut(s)	81, 902
Aor13HI	TCCGGA	1 cut(s)	1030
ApaI	GGGCCC	1 cut(s)	183
ApeKI	GCWGC	4 cut(s)	283, 295, 445, 529
ApoI	RAATTY	1 cut(s)	1356
ArsI	GACNNNNNNTTYG	2 cut(s)	672, 704
Asp700I	GAANNNNTTC	1 cut(s)	879
Asp718I	GGTACC	1 cut(s)	1019
AspLEI	GCGC	2 cut(s)	676, 1224
AsuC2I	CCSGG	3 cut(s)	222, 373, 461
AsuHPI	GGTGA	8 cut(s)	100, 133, 220, 559, 767, 928, 1277, 1421
AvaII	GGWCC	4 cut(s)	4, 25, 31, 384
AxyI	CCTNAGG	2 cut(s)	543, 912
BaeGI	GKGCMC	1 cut(s)	183
BanI	GGYRCC	2 cut(s)	119, 1019
BanII	GRGCYC	1 cut(s)	183
BbsI	GAAGAC	2 cut(s)	91, 247
BbvI	GCAGC	4 cut(s)	295, 307, 432, 516
BceAI	ACGGC	4 cut(s)	64, 265, 292, 1235
BcgI	CGANNNNNNTGC	2 cut(s)	947, 981
BciT130I	CCWGG	7 cut(s)	29, 452, 561, 1059, 1236, 1242, 1304
BciVI	GTATCC	1 cut(s)	1038
BclI	TGATCA	1 cut(s)	1411
BcnI	CCSGG	3 cut(s)	222, 373, 461
BcoDI	GTCTC	1 cut(s)	566
BfmI	CTRYAG	3 cut(s)	281, 530, 1275
BfoI	RGCGCY	2 cut(s)	677, 1225
BfuAI	ACCTGC	2 cut(s)	397, 1009
BfuI	GTATCC	1 cut(s)	1038
BglII	AGATCT	2 cut(s)	838, 1191
BisI	GCNGC	8 cut(s)	79, 284, 296, 299, 446, 495, 530, 729
BlsI	GCNGC	8 cut(s)	80, 285, 297, 300, 447, 496, 531, 730
Bme18I	GGWCC	4 cut(s)	4, 25, 31, 384
BmgBI	CACGTC	1 cut(s)	688
BmiI	GGNNCC	8 cut(s)	6, 52, 121, 181, 182, 385, 458, 1021
BmsI	GCATC	3 cut(s)	90, 856, 1327
BpiI	GAAGAC	2 cut(s)	91, 247
BpuEI	CTTGAG	1 cut(s)	998
BpuMI	CCSGG	3 cut(s)	222, 373, 461
BsaHI	GRCGYC	1 cut(s)	252
BsaWI	WCCGGW	1 cut(s)	1030
BsaXI	ACNNNNNCTCC	2 cut(s)	35, 65
Bsc4I	CCNNNNNNNGG	9 cut(s)	466, 516, 544, 1030, 1058, 1064, 1235, 1241, 1303
Bse21I	CCTNAGG	2 cut(s)	543, 912
Bse3DI	GCAATG	1 cut(s)	1288
BseAI	TCCGGA	1 cut(s)	1030
BseBI	CCWGG	7 cut(s)	29, 452, 561, 1059, 1236, 1242, 1304
BseLI	CCNNNNNNNGG	9 cut(s)	466, 516, 544, 1030, 1058, 1064, 1235, 1241, 1303
BseMI	GCAATG	1 cut(s)	1288
BseMII	CTCAG	3 cut(s)	534, 885, 903
BseSI	GKGCMC	1 cut(s)	183
BseXI	GCAGC	4 cut(s)	295, 307, 432, 516
BseYI	CCCAGC	1 cut(s)	209
BsgI	GTGCAG	2 cut(s)	314, 633
Bsh1236I	CGCG	1 cut(s)	159
BshNI	GGYRCC	2 cut(s)	119, 1019
BsiSI	CCGG	6 cut(s)	117, 174, 221, 372, 460, 1031
BslFI	GGGAC	1 cut(s)	413
BslI	CCNNNNNNNGG	9 cut(s)	466, 516, 544, 1030, 1058, 1064, 1235, 1241, 1303
BsmAI	GTCTC	1 cut(s)	566
BsmFI	GGGAC	1 cut(s)	413
BsmI	GAATGC	1 cut(s)	509
Bsp120I	GGGCCC	1 cut(s)	179
Bsp1286I	GDGCHC	1 cut(s)	183
Bsp13I	TCCGGA	1 cut(s)	1030
Bsp143I	GATC	7 cut(s)	86, 682, 838, 907, 1191, 1391, 1411
Bsp19I	CCATGG	1 cut(s)	424
BspCNI	CTCAG	3 cut(s)	535, 884, 904
BspEI	TCCGGA	1 cut(s)	1030
BspFNI	CGCG	1 cut(s)	159
BspLI	GGNNCC	8 cut(s)	6, 52, 121, 181, 182, 385, 458, 1021
BspMAI	CTGCAG	3 cut(s)	285, 534, 1279
BspMI	ACCTGC	2 cut(s)	397, 1009
BspPI	GGATC	2 cut(s)	81, 902
BspT107I	GGYRCC	2 cut(s)	119, 1019
BsrDI	GCAATG	1 cut(s)	1288
BssMI	GATC	7 cut(s)	86, 682, 838, 907, 1191, 1391, 1411
BssNI	GRCGYC	1 cut(s)	252
BssT1I	CCWWGG	3 cut(s)	424, 1015, 1119
Bst2UI	CCWGG	7 cut(s)	29, 452, 561, 1059, 1236, 1242, 1304
Bst4CI	ACNGT	2 cut(s)	670, 724
BstACI	GRCGYC	1 cut(s)	252
BstAPI	GCANNNNNTGC	1 cut(s)	1283
BstC8I	GCNNGC	7 cut(s)	179, 281, 479, 1112, 1279, 1342, 1365
BstDEI	CTNAG	6 cut(s)	543, 871, 884, 912, 1009, 1442
BstDSI	CCRYGG	3 cut(s)	247, 424, 1540
BstEII	GGTNACC	1 cut(s)	547
BstENI	CCTNNNNNAGG	1 cut(s)	1301
BstFNI	CGCG	1 cut(s)	159
BstH2I	RGCGCY	2 cut(s)	677, 1225
BstHHI	GCGC	2 cut(s)	676, 1224
BstKTI	GATC	7 cut(s)	89, 685, 841, 910, 1194, 1394, 1414
BstMAI	GTCTC	1 cut(s)	566
BstMBI	GATC	7 cut(s)	86, 682, 838, 907, 1191, 1391, 1411
BstMWI	GCNNNNNNNGC	2 cut(s)	292, 1283
BstNI	CCWGG	7 cut(s)	29, 452, 561, 1059, 1236, 1242, 1304
BstPI	GGTNACC	1 cut(s)	547
BstSFI	CTRYAG	3 cut(s)	281, 530, 1275
BstSLI	GKGCMC	1 cut(s)	183
BstUI	CGCG	1 cut(s)	159
BstV1I	GCAGC	4 cut(s)	295, 307, 432, 516
BstV2I	GAAGAC	2 cut(s)	91, 247
BstX2I	RGATCY	2 cut(s)	838, 1191
BstYI	RGATCY	2 cut(s)	838, 1191
Bsu36I	CCTNAGG	2 cut(s)	543, 912
BsuI	GTATCC	1 cut(s)	1038
BtgI	CCRYGG	3 cut(s)	247, 424, 1540
BtrI	CACGTC	1 cut(s)	688
BtsI	GCAGTG	1 cut(s)	1380
BtsIMutI	CAGTG	3 cut(s)	616, 729, 1380
BveI	ACCTGC	2 cut(s)	397, 1009
Cac8I	GCNNGC	7 cut(s)	179, 281, 479, 1112, 1279, 1342, 1365
CfoI	GCGC	2 cut(s)	676, 1224
CseI	GACGC	2 cut(s)	148, 241
CsiI	ACCWGGT	1 cut(s)	27
Csp6I	GTAC	3 cut(s)	535, 1020, 1483
CviAII	CATG	6 cut(s)	425, 971, 1126, 1430, 1468, 1496
CviQI	GTAC	3 cut(s)	535, 1020, 1483
DdeI	CTNAG	6 cut(s)	543, 871, 884, 912, 1009, 1442
DpnI	GATC	7 cut(s)	88, 684, 840, 909, 1193, 1393, 1413
DpnII	GATC	7 cut(s)	86, 682, 838, 907, 1191, 1391, 1411
DraIII	CACNNNGTG	1 cut(s)	234
EaeI	YGGCCR	3 cut(s)	438, 492, 726
EciI	GGCGGA	1 cut(s)	1289
Eco130I	CCWWGG	3 cut(s)	424, 1015, 1119
Eco24I	GRGCYC	1 cut(s)	183
Eco47I	GGWCC	4 cut(s)	4, 25, 31, 384
Eco81I	CCTNAGG	2 cut(s)	543, 912
Eco91I	GGTNACC	1 cut(s)	547
EcoNI	CCTNNNNNAGG	1 cut(s)	1301
EcoO109I	RGGNCCY	1 cut(s)	180
EcoO65I	GGTNACC	1 cut(s)	547
EcoRII	CCWGG	7 cut(s)	27, 450, 559, 1057, 1234, 1240, 1302
EcoT14I	CCWWGG	3 cut(s)	424, 1015, 1119
EcoT38I	GRGCYC	1 cut(s)	183
ErhI	CCWWGG	3 cut(s)	424, 1015, 1119
FaeI	CATG	6 cut(s)	428, 974, 1129, 1433, 1471, 1499
FaqI	GGGAC	1 cut(s)	413
FatI	CATG	6 cut(s)	424, 970, 1125, 1429, 1467, 1495
FauI	CCCGC	5 cut(s)	164, 170, 225, 299, 1103
FauNDI	CATATG	1 cut(s)	692
FbaI	TGATCA	1 cut(s)	1411
FblI	GTMKAC	1 cut(s)	780
Fnu4HI	GCNGC	8 cut(s)	79, 284, 296, 299, 446, 495, 530, 729
FriOI	GRGCYC	1 cut(s)	183
Fsp4HI	GCNGC	8 cut(s)	79, 284, 296, 299, 446, 495, 530, 729
GlaI	GCGC	2 cut(s)	675, 1223
GluI	GCNGC	8 cut(s)	79, 284, 296, 299, 446, 495, 530, 729
GsaI	CCCAGC	1 cut(s)	213
HaeII	RGCGCY	2 cut(s)	677, 1225
HapII	CCGG	6 cut(s)	117, 174, 221, 372, 460, 1031
HgaI	GACGC	2 cut(s)	148, 241
HhaI	GCGC	2 cut(s)	676, 1224
Hin1I	GRCGYC	1 cut(s)	252
Hin1II	CATG	6 cut(s)	428, 974, 1129, 1433, 1471, 1499
Hin6I	GCGC	2 cut(s)	674, 1222
HinP1I	GCGC	2 cut(s)	674, 1222
HincII	GTYRAC	2 cut(s)	781, 1309
HindII	GTYRAC	2 cut(s)	781, 1309
HindIII	AAGCTT	2 cut(s)	890, 1136
HinfI	GANTC	7 cut(s)	203, 267, 606, 716, 1043, 1072, 1212
HpaII	CCGG	6 cut(s)	117, 174, 221, 372, 460, 1031
HphI	GGTGA	8 cut(s)	100, 133, 220, 559, 767, 928, 1277, 1421
Hpy166II	GTNNAC	5 cut(s)	193, 781, 1052, 1309, 1549
Hpy188I	TCNGA	4 cut(s)	25, 86, 266, 874
Hpy188III	TCNNGA	7 cut(s)	41, 705, 911, 1031, 1090, 1195, 1460
Hpy8I	GTNNAC	5 cut(s)	193, 781, 1052, 1309, 1549
Hpy99I	CGWCG	2 cut(s)	164, 203
HpyAV	CCTTC	2 cut(s)	1062, 1593
HpyCH4III	ACNGT	2 cut(s)	670, 724
HpyCH4IV	ACGT	3 cut(s)	633, 687, 814
HpyF10VI	GCNNNNNNNGC	2 cut(s)	292, 1283
HpyF3I	CTNAG	6 cut(s)	543, 871, 884, 912, 1009, 1442
HpySE526I	ACGT	3 cut(s)	633, 687, 814
Hsp92I	GRCGYC	1 cut(s)	252
Hsp92II	CATG	6 cut(s)	428, 974, 1129, 1433, 1471, 1499
HspAI	GCGC	2 cut(s)	674, 1222
Kpn2I	TCCGGA	1 cut(s)	1030
KpnI	GGTACC	1 cut(s)	1023
Ksp22I	TGATCA	1 cut(s)	1411
Kzo9I	GATC	7 cut(s)	86, 682, 838, 907, 1191, 1391, 1411
LmnI	GCTCC	2 cut(s)	56, 805
Lsp1109I	GCAGC	4 cut(s)	295, 307, 432, 516
LweI	GCATC	3 cut(s)	90, 856, 1327
MabI	ACCWGGT	1 cut(s)	27
MaeII	ACGT	3 cut(s)	633, 687, 814
MaeIII	GTNAC	6 cut(s)	547, 581, 853, 1270, 1450, 1515
MalI	GATC	7 cut(s)	88, 684, 840, 909, 1193, 1393, 1413
MboI	GATC	7 cut(s)	86, 682, 838, 907, 1191, 1391, 1411
MboII	GAAGA	8 cut(s)	91, 247, 634, 656, 692, 833, 1201, 1534
MfeI	CAATTG	1 cut(s)	1181
MflI	RGATCY	2 cut(s)	838, 1191
MhlI	GDGCHC	1 cut(s)	183
MluCI	AATT	6 cut(s)	367, 878, 986, 1130, 1181, 1356
MlyI	GAGTC	3 cut(s)	197, 615, 1066
MmeI	TCCRAC	2 cut(s)	411, 1378
MroI	TCCGGA	1 cut(s)	1030
MroXI	GAANNNNTTC	1 cut(s)	879
MseI	TTAA	2 cut(s)	894, 1152
MslI	CAYNNNNRTG	4 cut(s)	429, 860, 1101, 1428
MspA1I	CMGCKG	2 cut(s)	286, 298
MspI	CCGG	6 cut(s)	117, 174, 221, 372, 460, 1031
MunI	CAATTG	1 cut(s)	1181
Mva1269I	GAATGC	1 cut(s)	509
MvaI	CCWGG	7 cut(s)	29, 452, 561, 1059, 1236, 1242, 1304
MvnI	CGCG	1 cut(s)	159
MwoI	GCNNNNNNNGC	2 cut(s)	292, 1283
NciI	CCSGG	3 cut(s)	222, 373, 461
NcoI	CCATGG	1 cut(s)	424
NdeI	CATATG	1 cut(s)	692
NdeII	GATC	7 cut(s)	86, 682, 838, 907, 1191, 1391, 1411
NlaIII	CATG	6 cut(s)	428, 974, 1129, 1433, 1471, 1499
NlaIV	GGNNCC	8 cut(s)	6, 52, 121, 181, 182, 385, 458, 1021
NmeAIII	GCCGAG	3 cut(s)	265, 282, 466
NmuCI	GTSAC	4 cut(s)	547, 853, 1270, 1515
OliI	CACNNNNGTG	1 cut(s)	860
PaqCI	CACCTGC	1 cut(s)	397
PasI	CCCWGGG	1 cut(s)	451
PcsI	WCGNNNNNNNCGW	3 cut(s)	82, 255, 507
PctI	GAATGC	1 cut(s)	509
PdmI	GAANNNNTTC	1 cut(s)	879
PfeI	GAWTC	4 cut(s)	267, 716, 1043, 1212
PflFI	GACNNNGTC	1 cut(s)	29
PflMI	CCANNNNNTGG	2 cut(s)	1058, 1235
PkrI	GCNGC	8 cut(s)	80, 285, 297, 300, 447, 496, 531, 730
PleI	GAGTC	3 cut(s)	197, 614, 1066
PpsI	GAGTC	3 cut(s)	197, 614, 1066
Psp6I	CCWGG	7 cut(s)	27, 450, 559, 1057, 1234, 1240, 1302
PspEI	GGTNACC	1 cut(s)	547
PspFI	CCCAGC	1 cut(s)	209
PspGI	CCWGG	7 cut(s)	27, 450, 559, 1057, 1234, 1240, 1302
PspN4I	GGNNCC	8 cut(s)	6, 52, 121, 181, 182, 385, 458, 1021
PspOMI	GGGCCC	1 cut(s)	179
PstI	CTGCAG	3 cut(s)	285, 534, 1279
PsuI	RGATCY	2 cut(s)	838, 1191
PsyI	GACNNNGTC	1 cut(s)	29
PvuII	CAGCTG	1 cut(s)	286
RsaI	GTAC	3 cut(s)	536, 1021, 1484
RsaNI	GTAC	3 cut(s)	535, 1020, 1483
RseI	CAYNNNNRTG	4 cut(s)	429, 860, 1101, 1428
SalI	GTCGAC	1 cut(s)	779
SaqAI	TTAA	2 cut(s)	894, 1152
SatI	GCNGC	8 cut(s)	79, 284, 296, 299, 446, 495, 530, 729
Sau3AI	GATC	7 cut(s)	86, 682, 838, 907, 1191, 1391, 1411
SchI	GAGTC	3 cut(s)	197, 615, 1066
SduI	GDGCHC	1 cut(s)	183
SexAI	ACCWGGT	1 cut(s)	27
SfaNI	GCATC	3 cut(s)	90, 856, 1327
SfcI	CTRYAG	3 cut(s)	281, 530, 1275
SinI	GGWCC	4 cut(s)	4, 25, 31, 384
SmiMI	CAYNNNNRTG	4 cut(s)	429, 860, 1101, 1428
SmlI	CTYRAG	1 cut(s)	977
SmoI	CTYRAG	1 cut(s)	977
Sse9I	AATT	6 cut(s)	367, 878, 986, 1130, 1181, 1356
StyI	CCWWGG	3 cut(s)	424, 1015, 1119
TaaI	ACNGT	2 cut(s)	670, 724
TaiI	ACGT	3 cut(s)	636, 690, 817
TaqI	TCGA	6 cut(s)	42, 501, 780, 957, 1143, 1593
TasI	AATT	6 cut(s)	367, 878, 986, 1130, 1181, 1356
TauI	GCSGC	4 cut(s)	81, 301, 497, 731
TfiI	GAWTC	4 cut(s)	267, 716, 1043, 1212
Tru1I	TTAA	2 cut(s)	894, 1152
Tru9I	TTAA	2 cut(s)	894, 1152
TscAI	CASTG	3 cut(s)	616, 729, 1380
TseFI	GTSAC	4 cut(s)	547, 853, 1270, 1515
TseI	GCWGC	4 cut(s)	283, 295, 445, 529
Tsp45I	GTSAC	4 cut(s)	547, 853, 1270, 1515
TspDTI	ATGAA	7 cut(s)	731, 755, 833, 934, 987, 1142, 1368
TspGWI	ACGGA	4 cut(s)	85, 178, 1529, 1534
TspRI	CASTG	3 cut(s)	616, 729, 1380
Tth111I	GACNNNGTC	1 cut(s)	29
Van91I	CCANNNNNTGG	2 cut(s)	1058, 1235
VpaK11BI	GGWCC	4 cut(s)	4, 25, 31, 384
XagI	CCTNNNNNAGG	1 cut(s)	1301
XapI	RAATTY	1 cut(s)	1356
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1103, 1232
XmiI	GTMKAC	1 cut(s)	780
XmnI	GAANNNNTTC	1 cut(s)	879

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.