Prupe.5G100800_v2.0.a1

GMP synthase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Reverse (-)
10872403 .. 10875547
3145 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G100800.1

Sequence Viewer

Length: 1605 bp
ATGGACCCAAAAGCCGTGAAATCGGAGCTCGTCCTGATTCTCGATTATGGCTCCCAATACACCCACCTCATCACCCGCCGAATTCGATCCCTCTCCGTCTTCTCCCTCTGCATCTCCGGCACTAGCTCTCTCAAATCCATCACCGACCTTAACCCTAAGGTCGTCATCCTCTCCGGCGGGCCCCACTCGGTCCACACCCCAGACTCGCCGAGCTTCCCTGCCGGATTCGTCGAGTGGGCCGAGGCCAATGGAGTCTTTGTCCTCGGTGTGTGCTATGGGCTTCAGCTGATAGTGCAGAGGCTTGGCGGGGAAGTTAGGGTTGGGGAGAAGCAGGAGTATGGGAGGATGGAGATTGAGGTGGAGATAAATTCTGGACTTTTTGGGTCCAAGAAAGTTGGGGATAAGCAGGTGGTTTGGATGAGCCATGGCGATGAGGTGGCGAAACTGCCTGATGCTTTCGAGGTCGTGGGGCGGAGCCAGCAGGGATCGGTGGCTGCAATTGAAAGTCCGATTAGGAGGTTCTATGGGTTGCAATACCACCCGGAGGTGACACATTCGCCGGAAGGGATGGAGACACTTCGATACTTTTTATTTGATATTTGTAAAGTCAGTGCAGGGTGGAGTATGGAAAACGTATTGGATGAAGAAATAAAAGTGATTAAAAGCACAGTAGGGACTGAAGATCATGTCATATGCGCGTTATCAGGAGGTGTCGATTCCACAGTTGCAGCAACTCTTGTTCATAAGGCAATTGGTGATAGGCTTCATTGTATCTTTGTTGACAATGGTTTATTGAGATATAAGGAGAGAGAACGTGTAATGGAAACCTTTGAAAGAGATCTTCATTTGCCTGTTACTTGTGTGGATGCCACTGATCAATTTCTTAGTGAGCTTAAAGGTGTTGTTGATCCTGAGAAGAAAAGGAAAATCATTGGAAAGGAGTTCATTAGCATTTTTGATGCTTTTGCACATGATTTGGAGAAAAAATTAGGGAGGAAACCTTCTTACTTGGTCCAAGGGACACTGTATCCAGATGTGATTGAATCTTGCCCACCACCTGGAAGTGGAAGGACACACTCCCACACAATCAAGAGCCATCATAATGTTGGTGGGCTTCCCAAGGACATGAAATTGAAGCTCATTGAGCCTCTTAAGCTTCTATTCAAGGATGAGGTTCGGCAATTAGGGAGGATCTTGGATGTCCCCCAGGGATTTCTAAAGCGCCATCCATTTCCTGGGCCCGGCCTTGCAGTACGAGTCTTGGGTGATGTGACTACAGGCAATGCCTTGGATGTCCTCCGCCAGGTTGATGAGATATTCATACAATCAATCAAAGATGCTGGGTTGTATGATGAAATCTGGCAAGCTTTTGCGGTGTTTTTGCCTGTAAGATCAGTTGGGGTTCAGGGTGATCAAAGAACACATTCTCATGTTGTTGCTCTCAGAGCTGTTACAAGTCAAGATGGGATGACAGCTGATTGGTACTATTTCGAACATAAGTTCCTTGATGATGTATCACGAAAGATCTGCAATAGCGTACGGGGTGTAAACCGAGTAGTTCAAGACATTACGTCGAAGCCTCCCTCCACAATTGAGTGGGAATGA

Protein Analysis

535

Amino Acids

59.4

Weight (kDa)

6.27

Isoelectric Point (pI)

38.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 397
Acc36I ACCTGC 1 cut(s) 397
AccB7I CCANNNNNTGG 2 cut(s) 1058, 1235
AccII CGCG 1 cut(s) 698
AciI CCGC 6 cut(s) 76, 177, 306, 472, 1300, 1373
AclWI GGATC 4 cut(s) 81, 493, 902, 1199
AcsI RAATTY 2 cut(s) 81, 367
AcuI CTGAAG 2 cut(s) 266, 699
AfaI GTAC 3 cut(s) 1254, 1484, 1539
AfiI CCNNNNNNNGG 6 cut(s) 544, 1058, 1064, 1235, 1241, 1303
AflII CTTAAG 1 cut(s) 1151
AflIII ACRYGT 1 cut(s) 814
AgsI TTSAA 6 cut(s) 503, 833, 1043, 1135, 1165, 1562
AhdI GACNNNNNGTC 1 cut(s) 1570
AjnI CCWGG 4 cut(s) 1057, 1206, 1234, 1302
AjuI GAANNNNNNNTTGG 2 cut(s) 303, 335
AloI GAACNNNNNNTCC 2 cut(s) 1485, 1517
Alw21I GWGCWC 1 cut(s) 30
Alw26I GTCTC 1 cut(s) 566
AlwI GGATC 4 cut(s) 81, 493, 902, 1199
AoxI GGCC 5 cut(s) 179, 237, 243, 1238, 1243
ApaI GGGCCC 2 cut(s) 183, 1242
ApeKI GCWGC 2 cut(s) 494, 728
ApoI RAATTY 2 cut(s) 81, 367
Asp700I GAANNNNTTC 1 cut(s) 1423
AspLEI GCGC 2 cut(s) 698, 1224
AspS9I GGNCC 9 cut(s) 4, 179, 180, 190, 237, 384, 1012, 1238, 1239
AsuC2I CCSGG 2 cut(s) 542, 1242
AsuHPI GGTGA 6 cut(s) 64, 133, 559, 767, 1277, 1421
AsuII TTCGAA 1 cut(s) 1491
AvaII GGWCC 4 cut(s) 4, 190, 384, 1012
AxyI CCTNAGG 1 cut(s) 156
BaeGI GKGCMC 2 cut(s) 183, 1242
BanII GRGCYC 3 cut(s) 30, 183, 1242
BbsI GAAGAC 1 cut(s) 91
Bbv12I GWGCWC 1 cut(s) 30
BbvI GCAGC 2 cut(s) 481, 740
BccI CCATC 6 cut(s) 146, 340, 562, 1104, 1233, 1457
BcgI CGANNNNNNTGC 2 cut(s) 1509, 1543
BciT130I CCWGG 4 cut(s) 1059, 1208, 1236, 1304
BciVI GTATCC 1 cut(s) 1038
BclI TGATCA 2 cut(s) 874, 1411
BcnI CCSGG 2 cut(s) 542, 1242
BcoDI GTCTC 1 cut(s) 566
BfaI CTAG 1 cut(s) 123
BfmI CTRYAG 1 cut(s) 1275
BfoI RGCGCY 1 cut(s) 1225
BfrI CTTAAG 1 cut(s) 1151
BfuAI ACCTGC 1 cut(s) 397
BfuI GTATCC 1 cut(s) 1038
BglII AGATCT 2 cut(s) 838, 1524
BisI GCNGC 2 cut(s) 495, 729
BlsI GCNGC 2 cut(s) 496, 730
Bme1390I CCNGG 6 cut(s) 542, 1059, 1208, 1236, 1242, 1304
Bme18I GGWCC 4 cut(s) 4, 190, 384, 1012
BmeRI GACNNNNNGTC 1 cut(s) 1570
BmgT120I GGNCC 9 cut(s) 4, 179, 180, 190, 237, 384, 1012, 1238, 1239
BmiI GGNNCC 7 cut(s) 6, 52, 181, 182, 385, 476, 1240
BmrFI CCNGG 6 cut(s) 542, 1059, 1208, 1236, 1242, 1304
BmsI GCATC 5 cut(s) 120, 442, 856, 949, 1327
BpiI GAAGAC 1 cut(s) 91
Bpu14I TTCGAA 1 cut(s) 1491
BpuMI CCSGG 2 cut(s) 542, 1242
BsaJI CCNNGG 9 cut(s) 240, 262, 424, 1015, 1119, 1206, 1207, 1235, 1287
BsaXI ACNNNNNCTCC 2 cut(s) 243, 273
Bsc4I CCNNNNNNNGG 6 cut(s) 544, 1058, 1064, 1235, 1241, 1303
Bse21I CCTNAGG 1 cut(s) 156
Bse3DI GCAATG 1 cut(s) 1288
BseBI CCWGG 4 cut(s) 1059, 1208, 1236, 1304
BseDI CCNNGG 9 cut(s) 240, 262, 424, 1015, 1119, 1206, 1207, 1235, 1287
BseLI CCNNNNNNNGG 6 cut(s) 544, 1058, 1064, 1235, 1241, 1303
BseMI GCAATG 1 cut(s) 1288
BseMII CTCAG 2 cut(s) 903, 1456
BseSI GKGCMC 2 cut(s) 183, 1242
BseXI GCAGC 2 cut(s) 481, 740
BseYI CCCAGC 1 cut(s) 1340
BsgI GTGCAG 2 cut(s) 314, 633
Bsh1236I CGCG 1 cut(s) 698
BshFI GGCC 5 cut(s) 181, 239, 245, 1240, 1245
BsiHKAI GWGCWC 1 cut(s) 30
BsiSI CCGG 6 cut(s) 117, 174, 222, 542, 560, 1242
BsiWI CGTACG 1 cut(s) 1537
BslFI GGGAC 3 cut(s) 688, 1033, 1187
BslI CCNNNNNNNGG 6 cut(s) 544, 1058, 1064, 1235, 1241, 1303
BsmAI GTCTC 1 cut(s) 566
BsmFI GGGAC 3 cut(s) 688, 1033, 1187
BsnI GGCC 5 cut(s) 181, 239, 245, 1240, 1245
Bsp119I TTCGAA 1 cut(s) 1491
Bsp120I GGGCCC 2 cut(s) 179, 1238
Bsp1286I GDGCHC 3 cut(s) 30, 183, 1242
Bsp19I CCATGG 1 cut(s) 424
BspACI CCGC 6 cut(s) 76, 177, 306, 472, 1300, 1373
BspANI GGCC 5 cut(s) 181, 239, 245, 1240, 1245
BspCNI CTCAG 2 cut(s) 904, 1455
BspFNI CGCG 1 cut(s) 698
BspLI GGNNCC 7 cut(s) 6, 52, 181, 182, 385, 476, 1240
BspMI ACCTGC 1 cut(s) 397
BspPI GGATC 4 cut(s) 81, 493, 902, 1199
BspT104I TTCGAA 1 cut(s) 1491
BspTI CTTAAG 1 cut(s) 1151
BsrDI GCAATG 1 cut(s) 1288
BssECI CCNNGG 9 cut(s) 240, 262, 424, 1015, 1119, 1206, 1207, 1235, 1287
BssT1I CCWWGG 4 cut(s) 424, 1015, 1119, 1287
Bst2UI CCWGG 4 cut(s) 1059, 1208, 1236, 1304
Bst4CI ACNGT 3 cut(s) 670, 724, 1026
BstAFI CTTAAG 1 cut(s) 1151
BstBI TTCGAA 1 cut(s) 1491
BstC8I GCNNGC 3 cut(s) 179, 479, 1365
BstDEI CTNAG 4 cut(s) 156, 884, 912, 1442
BstDSI CCRYGG 1 cut(s) 424
BstENI CCTNNNNNAGG 1 cut(s) 1301
BstFNI CGCG 1 cut(s) 698
BstH2I RGCGCY 1 cut(s) 1225
BstHHI GCGC 2 cut(s) 698, 1224
BstMAI GTCTC 1 cut(s) 566
BstMWI GCNNNNNNNGC 6 cut(s) 117, 292, 478, 1144, 1153, 1445
BstNI CCWGG 4 cut(s) 1059, 1208, 1236, 1304
BstSCI CCNGG 6 cut(s) 540, 1057, 1206, 1234, 1240, 1302
BstSFI CTRYAG 1 cut(s) 1275
BstSLI GKGCMC 2 cut(s) 183, 1242
BstUI CGCG 1 cut(s) 698
BstV1I GCAGC 2 cut(s) 481, 740
BstV2I GAAGAC 1 cut(s) 91
BstX2I RGATCY 3 cut(s) 838, 1191, 1524
BstYI RGATCY 3 cut(s) 838, 1191, 1524
Bsu36I CCTNAGG 1 cut(s) 156
BsuI GTATCC 1 cut(s) 1038
BsuRI GGCC 5 cut(s) 181, 239, 245, 1240, 1245
BtgI CCRYGG 1 cut(s) 424
BtgZI GCGATG 1 cut(s) 444
BtsIMutI CAGTG 3 cut(s) 616, 870, 1022
BveI ACCTGC 1 cut(s) 397
Cac8I GCNNGC 3 cut(s) 179, 479, 1365
CfoI GCGC 2 cut(s) 698, 1224
Cfr13I GGNCC 9 cut(s) 4, 179, 180, 190, 237, 384, 1012, 1238, 1239
Csp6I GTAC 3 cut(s) 1253, 1483, 1538
CviAII CATG 5 cut(s) 425, 686, 971, 1126, 1430
CviQI GTAC 3 cut(s) 1253, 1483, 1538
DdeI CTNAG 4 cut(s) 156, 884, 912, 1442
DriI GACNNNNNGTC 1 cut(s) 1570
Eam1105I GACNNNNNGTC 1 cut(s) 1570
EciI GGCGGA 2 cut(s) 487, 1289
Ecl136II GAGCTC 1 cut(s) 28
Eco130I CCWWGG 4 cut(s) 424, 1015, 1119, 1287
Eco24I GRGCYC 3 cut(s) 30, 183, 1242
Eco47I GGWCC 4 cut(s) 4, 190, 384, 1012
Eco53kI GAGCTC 1 cut(s) 28
Eco57I CTGAAG 2 cut(s) 266, 699
Eco81I CCTNAGG 1 cut(s) 156
EcoICRI GAGCTC 1 cut(s) 28
EcoNI CCTNNNNNAGG 1 cut(s) 1301
EcoO109I RGGNCCY 1 cut(s) 180
EcoRI GAATTC 1 cut(s) 81
EcoRII CCWGG 4 cut(s) 1057, 1206, 1234, 1302
EcoT14I CCWWGG 4 cut(s) 424, 1015, 1119, 1287
EcoT38I GRGCYC 3 cut(s) 30, 183, 1242
ErhI CCWWGG 4 cut(s) 424, 1015, 1119, 1287
FaeI CATG 5 cut(s) 428, 689, 974, 1129, 1433
FaqI GGGAC 3 cut(s) 688, 1033, 1187
FatI CATG 5 cut(s) 424, 685, 970, 1125, 1429
FauI CCCGC 3 cut(s) 83, 170, 299
FauNDI CATATG 1 cut(s) 692
FbaI TGATCA 2 cut(s) 874, 1411
Fnu4HI GCNGC 2 cut(s) 495, 729
FriOI GRGCYC 3 cut(s) 30, 183, 1242
Fsp4HI GCNGC 2 cut(s) 495, 729
FspBI CTAG 1 cut(s) 123
GlaI GCGC 2 cut(s) 697, 1223
GluI GCNGC 2 cut(s) 495, 729
GsaI CCCAGC 1 cut(s) 1344
HaeII RGCGCY 1 cut(s) 1225
HaeIII GGCC 5 cut(s) 181, 239, 245, 1240, 1245
HapII CCGG 6 cut(s) 117, 174, 222, 542, 560, 1242
HhaI GCGC 2 cut(s) 698, 1224
Hin1II CATG 5 cut(s) 428, 689, 974, 1129, 1433
Hin6I GCGC 2 cut(s) 696, 1222
HinP1I GCGC 2 cut(s) 696, 1222
HincII GTYRAC 1 cut(s) 781
HindII GTYRAC 1 cut(s) 781
HindIII AAGCTT 2 cut(s) 1154, 1365
HinfI GANTC 7 cut(s) 37, 203, 225, 252, 716, 1043, 1257
HpaII CCGG 6 cut(s) 117, 174, 222, 542, 560, 1242
HphI GGTGA 6 cut(s) 64, 133, 559, 767, 1277, 1421
Hpy166II GTNNAC 3 cut(s) 193, 781, 1549
Hpy188I TCNGA 3 cut(s) 25, 510, 1445
Hpy8I GTNNAC 3 cut(s) 193, 781, 1549
Hpy99I CGWCG 2 cut(s) 233, 1576
HpyAV CCTTC 3 cut(s) 557, 1011, 1062
HpyCH4III ACNGT 3 cut(s) 670, 724, 1026
HpyCH4IV ACGT 3 cut(s) 633, 814, 1571
HpyCH4V TGCA 9 cut(s) 111, 295, 497, 532, 614, 728, 968, 1250, 1530
HpyF10VI GCNNNNNNNGC 6 cut(s) 117, 292, 478, 1144, 1153, 1445
HpyF3I CTNAG 4 cut(s) 156, 884, 912, 1442
HpySE526I ACGT 3 cut(s) 633, 814, 1571
Hsp92II CATG 5 cut(s) 428, 689, 974, 1129, 1433
HspAI GCGC 2 cut(s) 696, 1222
Ksp22I TGATCA 2 cut(s) 874, 1411
LmnI GCTCC 3 cut(s) 25, 56, 474
Lsp1109I GCAGC 2 cut(s) 481, 740
LweI GCATC 5 cut(s) 120, 442, 856, 949, 1327
MaeI CTAG 1 cut(s) 123
MaeII ACGT 3 cut(s) 633, 814, 1571
MaeIII GTNAC 4 cut(s) 547, 853, 1270, 1450
MboII GAAGA 5 cut(s) 91, 656, 692, 833, 928
MfeI CAATTG 3 cut(s) 498, 750, 1590
MflI RGATCY 3 cut(s) 838, 1191, 1524
MhlI GDGCHC 3 cut(s) 30, 183, 1242
MluCI AATT 9 cut(s) 81, 367, 498, 750, 878, 986, 1130, 1181, 1590
MlyI GAGTC 3 cut(s) 197, 261, 1266
MroXI GAANNNNTTC 1 cut(s) 1423
MseI TTAA 4 cut(s) 150, 660, 894, 1152
MslI CAYNNNNRTG 3 cut(s) 429, 1101, 1428
MspA1I CMGCKG 2 cut(s) 286, 1475
MspCI CTTAAG 1 cut(s) 1151
MspI CCGG 6 cut(s) 117, 174, 222, 542, 560, 1242
MspR9I CCNGG 6 cut(s) 542, 1059, 1208, 1236, 1242, 1304
MunI CAATTG 3 cut(s) 498, 750, 1590
MvaI CCWGG 4 cut(s) 1059, 1208, 1236, 1304
MvnI CGCG 1 cut(s) 698
MwoI GCNNNNNNNGC 6 cut(s) 117, 292, 478, 1144, 1153, 1445
NciI CCSGG 2 cut(s) 542, 1242
NcoI CCATGG 1 cut(s) 424
NdeI CATATG 1 cut(s) 692
NlaIII CATG 5 cut(s) 428, 689, 974, 1129, 1433
NlaIV GGNNCC 7 cut(s) 6, 52, 181, 182, 385, 476, 1240
NmeAIII GCCGAG 2 cut(s) 234, 265
NmuCI GTSAC 2 cut(s) 547, 1270
NspV TTCGAA 1 cut(s) 1491
PaqCI CACCTGC 1 cut(s) 397
PasI CCCWGGG 1 cut(s) 1207
PcsI WCGNNNNNNNCGW 1 cut(s) 237
PdmI GAANNNNTTC 1 cut(s) 1423
PfeI GAWTC 4 cut(s) 37, 225, 716, 1043
Pfl23II CGTACG 1 cut(s) 1537
PflMI CCANNNNNTGG 2 cut(s) 1058, 1235
PkrI GCNGC 2 cut(s) 496, 730
PleI GAGTC 3 cut(s) 197, 260, 1265
PpsI GAGTC 3 cut(s) 197, 260, 1265
Psp124BI GAGCTC 1 cut(s) 30
Psp6I CCWGG 4 cut(s) 1057, 1206, 1234, 1302
PspFI CCCAGC 1 cut(s) 1340
PspGI CCWGG 4 cut(s) 1057, 1206, 1234, 1302
PspLI CGTACG 1 cut(s) 1537
PspN4I GGNNCC 7 cut(s) 6, 52, 181, 182, 385, 476, 1240
PspOMI GGGCCC 2 cut(s) 179, 1238
PspPI GGNCC 9 cut(s) 4, 179, 180, 190, 237, 384, 1012, 1238, 1239
PsuI RGATCY 3 cut(s) 838, 1191, 1524
PvuII CAGCTG 2 cut(s) 286, 1475
RsaI GTAC 3 cut(s) 1254, 1484, 1539
RsaNI GTAC 3 cut(s) 1253, 1483, 1538
RseI CAYNNNNRTG 3 cut(s) 429, 1101, 1428
SacI GAGCTC 1 cut(s) 30
SaqAI TTAA 4 cut(s) 150, 660, 894, 1152
SatI GCNGC 2 cut(s) 495, 729
Sau96I GGNCC 9 cut(s) 4, 179, 180, 190, 237, 384, 1012, 1238, 1239
SchI GAGTC 3 cut(s) 197, 261, 1266
ScrFI CCNGG 6 cut(s) 542, 1059, 1208, 1236, 1242, 1304
SduI GDGCHC 3 cut(s) 30, 183, 1242
SfaNI GCATC 5 cut(s) 120, 442, 856, 949, 1327
SfcI CTRYAG 1 cut(s) 1275
SfuI TTCGAA 1 cut(s) 1491
SinI GGWCC 4 cut(s) 4, 190, 384, 1012
SmiMI CAYNNNNRTG 3 cut(s) 429, 1101, 1428
SmlI CTYRAG 1 cut(s) 1151
SmoI CTYRAG 1 cut(s) 1151
Sse9I AATT 9 cut(s) 81, 367, 498, 750, 878, 986, 1130, 1181, 1590
SsiI CCGC 6 cut(s) 76, 177, 306, 472, 1300, 1373
SspMI CTAG 1 cut(s) 123
SstI GAGCTC 1 cut(s) 30
StyD4I CCNGG 6 cut(s) 540, 1057, 1206, 1234, 1240, 1302
StyI CCWWGG 4 cut(s) 424, 1015, 1119, 1287
TaaI ACNGT 3 cut(s) 670, 724, 1026
TaiI ACGT 3 cut(s) 636, 817, 1574
TaqI TCGA 8 cut(s) 42, 85, 231, 459, 580, 714, 1491, 1574
TaqII GACCGA 1 cut(s) 178
TasI AATT 9 cut(s) 81, 367, 498, 750, 878, 986, 1130, 1181, 1590
TfiI GAWTC 4 cut(s) 37, 225, 716, 1043
Tru1I TTAA 4 cut(s) 150, 660, 894, 1152
Tru9I TTAA 4 cut(s) 150, 660, 894, 1152
TscAI CASTG 3 cut(s) 616, 877, 1029
TseFI GTSAC 2 cut(s) 547, 1270
TseI GCWGC 2 cut(s) 494, 728
Tsp45I GTSAC 2 cut(s) 547, 1270
TspDTI ATGAA 8 cut(s) 657, 731, 755, 833, 934, 1142, 1309, 1368
TspGWI ACGGA 1 cut(s) 85
TspRI CASTG 3 cut(s) 616, 877, 1029
Van91I CCANNNNNTGG 2 cut(s) 1058, 1235
Vha464I CTTAAG 1 cut(s) 1151
VpaK11BI GGWCC 4 cut(s) 4, 190, 384, 1012
XagI CCTNNNNNAGG 1 cut(s) 1301
XapI RAATTY 2 cut(s) 81, 367
XcmI CCANNNNNNNNNTGG 2 cut(s) 1103, 1232
XmnI GAANNNNTTC 1 cut(s) 1423
XspI CTAG 1 cut(s) 123
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.