Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0006144

Physical Location & Seq

Genomic Coordinates Reverse (-)

20841437 .. 20845919

Gene Structure 4483 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g29980.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1968 bp

ATGGCTGACGTAGTCCAGTATCGACTTGAGCGTATGACCAATGAGCTCAATGATCTCGAGCAACGTGGAATTTTTACGCGCAGAGAGATATCTGAGATTGTCAAGAAGCGTACCAAGTTTGAGTACCGGCTCAAACGTCCGAGCCCACTCAAGCAGGATTACCTTTCCTATATTGACTATGAGACTCAGCTTGACTCACTCCGTCGGCTCAGAAAAAAATCAGTGACGCGTGAGCTGCAAAAGCAGGGCCTCAAGACCACTAAGAAGATGAAGAAGTCAGTTTCAGACTTTGCCGGAATCATGAGGATTCTTGATATTTATAGGCTTGCAGTCATGAGGTTTAAGGGAGATATTGAACTGTGGTTTCGGTACCTTGAGTTTTGTCGACAAAAAAGGAATGGTAGAATGAAGAAGGTCCTGGCTGATGTAATCAAATTTCACCCAAAGGTCCCCGGTGTCTGGATTTATGCTGCAGCTTGGGAATTTGACCATAACTTGAATGTTGAAGCTGCCCGTGCTATCATGCAGAACGGGTTAAGAGTTTGCACAACATCAGAAGACCTCTGGATAGAGTATCTTCGAATGGAACTCACATTCCTCAATAAATTAAAGGCTCGGAAGGTTGCGCTTGGAGAGGATGAGGGTACTTTTACCCGTGATCAGATAAGTTCGGATAAGAAACAGTGGAGAGATGAAAACAAAGACTTATTCATGTCCCTCAATGACAAAGGAGAAAATAATGAAGGGTCTGATGACGAAAATGAAAAGTCAATCAAGAAAATTAGTAAGTTTCAAGAGCAAGGTTTTAGCATAATAAGAACCATATACGCTGGAGCAGTAGAAGCTCTTCCCTCTAGTTTTAGTCTGAGAAAACGTTTTTTGGAGATCCTGGAAGCTACTGACTTGGTTAATTCGGAAGAAATACATAGGGAAATACTAAGTGATATGAAGAGAGACTTCTCAACAGAACCAGGGTATTGGGATTGGCTTGCAAGACTCGAATATAATCCTGGAAGGAAGGAATATATCAGTGAAGAAGGCGCACTTTCTCAGATAGAAAAAGCAATTCAGTTTTATGAGGAGGCTATAGAAGTTTTACCTACAGCTACGATGCTAAACCAGTATGCGAAATTTTTGAATGGTGTTGTCACTCTTCCAAAGTTAGAAAACAAGCCTTCTGGGATATCTACTCCATCTGACAGTTATATTCCTCTTCTTTTGAGGGCTTACGAAAAGGTTAAAACAATGGGCTATATTGAGGAGGATCTTGCTTGTCAGCATATTTCATTTCTTTTGCAACTTGGAAGACTAGAGGAAGCCCGAAAACTGGCAGATAATCTTTGTTCTGGGATATTTTCAAATTCAGTGAAGTTATGGCAGTTAAGAATCTCTATCGGCATCAGACACTTAACAAGGGATTCCATGTCGCCGAGTAAAGCTGAGCTACTATCCATCTATGAACTTTTTCAAGATGTTTTGACAAGAGTGCCCATTTCAGAAGCTGAGAGCCTGTGGTTAATGGCCCTTAAATTCTTTGCAAATCAAAAGCATTATTTTGGCAAGTTGGTGGAGATTTCTATCAGATCATTGACAAAAGATGGCGGCAGTGAACATGGATTTTCCCTCTCTGCTGCTATTGTGAATTTTGTTCTTCAAAAAGATGGACTTTCACATGCTAGAGAGATGTATAAACGCTTCATTGCTTTACCACACCCTGGGCTTGCTCTTTCTAGAGCATGCATTGAATTGGAATCAAACCTTGCATCCATTGGGGATAGAGATAGCCTTGTCCATGCGAGGAAATTATATGAATCTGCACTTCAAACGTATGACCAAGATTTGAGCTTATGGCGAGATTACTATCTGATGGAGACTAAGATGGGAACATCAGAAACAGCTTTTGCTGTACATTGGAAAGCACGCAAGATTCTAAAAGACACAACCGCTCTTGTTACACCAGATTTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000462 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016070 GO:0016072 GO:0022613 GO:0030490 GO:0030515 GO:0030684 GO:0030686 GO:0031974 GO:0031981 GO:0032040 GO:0032991 GO:0034388 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0042274 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0046483 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

U3_assoc_6

Protein Analysis

656

Amino Acids

75.96

Weight (kDa)

8.76

Isoelectric Point (pI)

45.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
U3_assoc_6	PF08640	9 - 82	3.1e-26	U3 small nucleolar RNA-associated protein 6
UTP6_C	PF24892	353 - 644	2.5e-17	U3 small nucleolar RNA-associated protein 6 C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006144)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G28200
fragaria_vesca	FvH4_5g29980 FvH4_5g29980 FvH4_5g29980
malus_domestica	MD08G1079900.v1.1 MD15G1066800.v1.1
prunus_persica	Prupe.4G224400_v2.0.a1
pyrus_communis	pycom08g06600 pycom15g06340
rosa_chinensis	RchiOBHm_Chr7g0223851 RchiOBHm_Chr7g0223951
rosa_laevigata	RLG00000001926
rosa_multiflora	Rmu_sc0002469.1_g000009 Rmu_sc0004540.1_g000012 Rmu_sc0004540.1_g000016
rosa_roxburghii	Rroxscaffold_3G00235230
rosa_rugosa	Rorug07G0220900
rosa_samantha	Rh7AG363500 Rh7AG364100 Rh7BG354600 Rh7BG355500 Rh7CG382100 Rh7CG382900 Rh7DG358100 Rh7DG358600
rosa_wichuraiana	Rw7G030850 Rw7G030880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	369
AccB1I	GGYRCC	1 cut(s)	369
AccB7I	CCANNNNNTGG	1 cut(s)	1715
AccBSI	CCGCTC	1 cut(s)	1946
AccI	GTMKAC	1 cut(s)	385
AccII	CGCG	2 cut(s)	79, 229
AciI	CCGC	2 cut(s)	1602, 1944
AclI	AACGTT	1 cut(s)	874
AclWI	GGATC	2 cut(s)	880, 1272
AcsI	RAATTY	7 cut(s)	69, 434, 482, 1130, 1360, 1529, 1642
AfaI	GTAC	5 cut(s)	112, 125, 371, 646, 1908
AfiI	CCNNNNNNNGG	3 cut(s)	459, 1327, 1715
AflIII	ACRYGT	1 cut(s)	227
AjnI	CCWGG	5 cut(s)	417, 888, 970, 1009, 1714
AloI	GAACNNNNNNTCC	2 cut(s)	579, 611
Alw21I	GWGCWC	1 cut(s)	48
Alw26I	GTCTC	3 cut(s)	176, 948, 1865
AlwI	GGATC	2 cut(s)	880, 1272
AlwNI	CAGNNNCTG	1 cut(s)	1502
Ama87I	CYCGRG	1 cut(s)	56
AoxI	GGCC	2 cut(s)	247, 1521
ApeKI	GCWGC	5 cut(s)	235, 470, 473, 509, 1631
ApoI	RAATTY	7 cut(s)	69, 434, 482, 1130, 1360, 1529, 1642
Asp700I	GAANNNNTTC	2 cut(s)	846, 1464
Asp718I	GGTACC	1 cut(s)	369
AspLEI	GCGC	3 cut(s)	81, 628, 1043
AspS9I	GGNCC	4 cut(s)	247, 415, 448, 1522
AsuC2I	CCSGG	1 cut(s)	453
AsuHPI	GGTGA	1 cut(s)	431
AsuII	TTCGAA	1 cut(s)	580
AvaI	CYCGRG	1 cut(s)	56
AvaII	GGWCC	2 cut(s)	415, 448
BaeGI	GKGCMC	1 cut(s)	1491
BanI	GGYRCC	1 cut(s)	369
BanII	GRGCYC	2 cut(s)	48, 146
BarI	GAAGNNNNNNTAC	4 cut(s)	831, 863, 1679, 1711
BbsI	GAAGAC	2 cut(s)	564, 1312
Bbv12I	GWGCWC	1 cut(s)	48
BbvI	GCAGC	5 cut(s)	222, 457, 485, 496, 1618
BccI	CCATC	6 cut(s)	1201, 1460, 1592, 1655, 1861, 1873
BciT130I	CCWGG	5 cut(s)	419, 890, 972, 1011, 1716
BclI	TGATCA	1 cut(s)	658
BcnI	CCSGG	1 cut(s)	453
BcoDI	GTCTC	3 cut(s)	176, 948, 1865
BfaI	CTAG	4 cut(s)	855, 1310, 1677, 1731
BfmI	CTRYAG	3 cut(s)	471, 1086, 1101
BisI	GCNGC	6 cut(s)	236, 471, 474, 510, 1603, 1632
BlpI	GCTNAGC	1 cut(s)	1440
BlsI	GCNGC	6 cut(s)	237, 472, 475, 511, 1604, 1633
Bme1390I	CCNGG	6 cut(s)	419, 453, 890, 972, 1011, 1716
Bme18I	GGWCC	2 cut(s)	415, 448
BmeT110I	CYCGRG	1 cut(s)	56
BmgT120I	GGNCC	4 cut(s)	247, 415, 448, 1522
BmiI	GGNNCC	2 cut(s)	371, 450
BmrFI	CCNGG	6 cut(s)	419, 453, 890, 972, 1011, 1716
BmsI	GCATC	3 cut(s)	1101, 1407, 1772
BpiI	GAAGAC	2 cut(s)	564, 1312
BpmI	CTGGAG	1 cut(s)	852
Bpu1102I	GCTNAGC	1 cut(s)	1440
Bpu14I	TTCGAA	1 cut(s)	580
BpuEI	CTTGAG	4 cut(s)	47, 134, 236, 395
BpuMI	CCSGG	1 cut(s)	453
BsaBI	GATNNNNATC	2 cut(s)	1577, 1860
BsaJI	CCNNGG	4 cut(s)	451, 971, 1714, 1715
Bsc4I	CCNNNNNNNGG	3 cut(s)	459, 1327, 1715
Bse118I	RCCGGY	1 cut(s)	126
Bse1I	ACTGG	3 cut(s)	16, 1120, 1332
Bse3DI	GCAATG	1 cut(s)	1698
Bse8I	GATNNNNATC	2 cut(s)	1577, 1860
BseBI	CCWGG	5 cut(s)	419, 890, 972, 1011, 1716
BseDI	CCNNGG	4 cut(s)	451, 971, 1714, 1715
BseGI	GGATG	2 cut(s)	643, 1763
BseJI	GATNNNNATC	2 cut(s)	1577, 1860
BseLI	CCNNNNNNNGG	3 cut(s)	459, 1327, 1715
BseMI	GCAATG	1 cut(s)	1698
BseMII	CTCAG	7 cut(s)	84, 200, 223, 857, 1064, 1431, 1494
BseNI	ACTGG	3 cut(s)	16, 1120, 1332
BseRI	GAGGAG	2 cut(s)	1094, 1274
BseSI	GKGCMC	1 cut(s)	1491
BseXI	GCAGC	5 cut(s)	222, 457, 485, 496, 1618
BsgI	GTGCAG	1 cut(s)	1800
Bsh1236I	CGCG	2 cut(s)	79, 229
BshFI	GGCC	2 cut(s)	249, 1523
BshNI	GGYRCC	1 cut(s)	369
BsiHKAI	GWGCWC	1 cut(s)	48
BsiHKCI	CYCGRG	1 cut(s)	56
BsiSI	CCGG	3 cut(s)	127, 294, 453
BslFI	GGGAC	2 cut(s)	434, 700
BslI	CCNNNNNNNGG	3 cut(s)	459, 1327, 1715
BsmAI	GTCTC	3 cut(s)	176, 948, 1865
BsmFI	GGGAC	2 cut(s)	434, 700
BsnI	GGCC	2 cut(s)	249, 1523
BsoBI	CYCGRG	1 cut(s)	56
Bsp119I	TTCGAA	1 cut(s)	580
Bsp1286I	GDGCHC	3 cut(s)	48, 146, 1491
Bsp1407I	TGTACA	1 cut(s)	1906
Bsp143I	GATC	5 cut(s)	52, 658, 885, 1264, 1583
Bsp1720I	GCTNAGC	1 cut(s)	1440
BspACI	CCGC	2 cut(s)	1602, 1944
BspANI	GGCC	2 cut(s)	249, 1523
BspCNI	CTCAG	7 cut(s)	85, 199, 222, 858, 1063, 1432, 1495
BspFNI	CGCG	2 cut(s)	79, 229
BspHI	TCATGA	2 cut(s)	300, 333
BspLI	GGNNCC	2 cut(s)	371, 450
BspMAI	CTGCAG	1 cut(s)	475
BspPI	GGATC	2 cut(s)	880, 1272
BspQI	GCTCTTC	1 cut(s)	852
BspT104I	TTCGAA	1 cut(s)	580
BspT107I	GGYRCC	1 cut(s)	369
BsrBI	CCGCTC	1 cut(s)	1946
BsrDI	GCAATG	1 cut(s)	1698
BsrFI	RCCGGY	1 cut(s)	126
BsrGI	TGTACA	1 cut(s)	1906
BsrI	ACTGG	3 cut(s)	16, 1120, 1332
BssAI	RCCGGY	1 cut(s)	126
BssECI	CCNNGG	4 cut(s)	451, 971, 1714, 1715
BssMI	GATC	5 cut(s)	52, 658, 885, 1264, 1583
Bst2UI	CCWGG	5 cut(s)	419, 890, 972, 1011, 1716
Bst4CI	ACNGT	3 cut(s)	360, 684, 1202
Bst6I	CTCTTC	4 cut(s)	852, 944, 1158, 1218
BstAUI	TGTACA	1 cut(s)	1906
BstBI	TTCGAA	1 cut(s)	580
BstC8I	GCNNGC	5 cut(s)	327, 990, 1722, 1738, 1921
BstF5I	GGATG	2 cut(s)	643, 1763
BstFNI	CGCG	2 cut(s)	79, 229
BstHHI	GCGC	3 cut(s)	81, 628, 1043
BstKTI	GATC	5 cut(s)	55, 661, 888, 1267, 1586
BstMAI	GTCTC	3 cut(s)	176, 948, 1865
BstMBI	GATC	5 cut(s)	52, 658, 885, 1264, 1583
BstMWI	GCNNNNNNNGC	4 cut(s)	235, 241, 515, 842
BstNI	CCWGG	5 cut(s)	419, 890, 972, 1011, 1716
BstNSI	RCATGY	2 cut(s)	1676, 1740
BstSCI	CCNGG	6 cut(s)	417, 451, 888, 970, 1009, 1714
BstSFI	CTRYAG	3 cut(s)	471, 1086, 1101
BstSLI	GKGCMC	1 cut(s)	1491
BstUI	CGCG	2 cut(s)	79, 229
BstV1I	GCAGC	5 cut(s)	222, 457, 485, 496, 1618
BstV2I	GAAGAC	2 cut(s)	564, 1312
BstX2I	RGATCY	2 cut(s)	885, 1264
BstXI	CCANNNNNNTGG	1 cut(s)	978
BstYI	RGATCY	2 cut(s)	885, 1264
BsuRI	GGCC	2 cut(s)	249, 1523
BtsCI	GGATG	2 cut(s)	643, 1763
BtsI	GCAGTG	1 cut(s)	1612
BtsIMutI	CAGTG	5 cut(s)	228, 689, 1036, 1371, 1612
Cac8I	GCNNGC	5 cut(s)	327, 990, 1722, 1738, 1921
CaiI	CAGNNNCTG	1 cut(s)	1502
CciI	TCATGA	2 cut(s)	300, 333
CfoI	GCGC	3 cut(s)	81, 628, 1043
Cfr10I	RCCGGY	1 cut(s)	126
Cfr13I	GGNCC	4 cut(s)	247, 415, 448, 1522
CseI	GACGC	1 cut(s)	235
Csp6I	GTAC	5 cut(s)	111, 124, 370, 645, 1907
CviAII	CATG	9 cut(s)	301, 334, 523, 712, 1423, 1613, 1673, 1737, 1793
CviQI	GTAC	5 cut(s)	111, 124, 370, 645, 1907
DpnI	GATC	5 cut(s)	54, 660, 887, 1266, 1585
DpnII	GATC	5 cut(s)	52, 658, 885, 1264, 1583
Eam1104I	CTCTTC	4 cut(s)	852, 944, 1158, 1218
EarI	CTCTTC	4 cut(s)	852, 944, 1158, 1218
Ecl136II	GAGCTC	1 cut(s)	46
Eco24I	GRGCYC	2 cut(s)	48, 146
Eco32I	GATATC	2 cut(s)	90, 1185
Eco47I	GGWCC	2 cut(s)	415, 448
Eco53kI	GAGCTC	1 cut(s)	46
Eco88I	CYCGRG	1 cut(s)	56
EcoICRI	GAGCTC	1 cut(s)	46
EcoO109I	RGGNCCY	3 cut(s)	247, 415, 448
EcoRII	CCWGG	5 cut(s)	417, 888, 970, 1009, 1714
EcoRV	GATATC	2 cut(s)	90, 1185
EcoT22I	ATGCAT	1 cut(s)	1742
EcoT38I	GRGCYC	2 cut(s)	48, 146
FaeI	CATG	9 cut(s)	304, 337, 526, 715, 1426, 1616, 1676, 1740, 1796
FalI	AAGNNNNNCTT	6 cut(s)	941, 973, 1029, 1061, 1650, 1682
FaqI	GGGAC	2 cut(s)	434, 700
FatI	CATG	9 cut(s)	300, 333, 522, 711, 1422, 1612, 1672, 1736, 1792
FbaI	TGATCA	1 cut(s)	658
FblI	GTMKAC	1 cut(s)	385
Fnu4HI	GCNGC	6 cut(s)	236, 471, 474, 510, 1603, 1632
FokI	GGATG	2 cut(s)	650, 1750
FriOI	GRGCYC	2 cut(s)	48, 146
Fsp4HI	GCNGC	6 cut(s)	236, 471, 474, 510, 1603, 1632
FspBI	CTAG	4 cut(s)	855, 1310, 1677, 1731
GlaI	GCGC	3 cut(s)	80, 627, 1042
GluI	GCNGC	6 cut(s)	236, 471, 474, 510, 1603, 1632
GsuI	CTGGAG	1 cut(s)	852
HaeIII	GGCC	2 cut(s)	249, 1523
HapII	CCGG	3 cut(s)	127, 294, 453
HgaI	GACGC	1 cut(s)	235
HhaI	GCGC	3 cut(s)	81, 628, 1043
Hin1II	CATG	9 cut(s)	304, 337, 526, 715, 1426, 1616, 1676, 1740, 1796
Hin6I	GCGC	3 cut(s)	79, 626, 1041
HinP1I	GCGC	3 cut(s)	79, 626, 1041
HincII	GTYRAC	1 cut(s)	386
HindII	GTYRAC	1 cut(s)	386
HpaII	CCGG	3 cut(s)	127, 294, 453
HphI	GGTGA	1 cut(s)	431
Hpy166II	GTNNAC	2 cut(s)	386, 1610
Hpy8I	GTNNAC	2 cut(s)	386, 1610
Hpy99I	CGWCG	1 cut(s)	207
HpyAV	CCTTC	7 cut(s)	406, 613, 737, 1008, 1012, 1031, 1185
HpyCH4III	ACNGT	3 cut(s)	360, 684, 1202
HpyCH4IV	ACGT	5 cut(s)	9, 64, 136, 874, 1826
HpyF10VI	GCNNNNNNNGC	4 cut(s)	235, 241, 515, 842
HpySE526I	ACGT	5 cut(s)	9, 64, 136, 874, 1826
Hsp92II	CATG	9 cut(s)	304, 337, 526, 715, 1426, 1616, 1676, 1740, 1796
HspAI	GCGC	3 cut(s)	79, 626, 1041
KpnI	GGTACC	1 cut(s)	373
Ksp22I	TGATCA	1 cut(s)	658
Kzo9I	GATC	5 cut(s)	52, 658, 885, 1264, 1583
LguI	GCTCTTC	1 cut(s)	852
LmnI	GCTCC	1 cut(s)	833
Lsp1109I	GCAGC	5 cut(s)	222, 457, 485, 496, 1618
LweI	GCATC	3 cut(s)	1101, 1407, 1772
MaeI	CTAG	4 cut(s)	855, 1310, 1677, 1731
MaeII	ACGT	5 cut(s)	9, 64, 136, 874, 1826
MaeIII	GTNAC	3 cut(s)	223, 1147, 1951
MalI	GATC	5 cut(s)	54, 660, 887, 1266, 1585
MbiI	CCGCTC	1 cut(s)	1946
MboI	GATC	5 cut(s)	52, 658, 885, 1264, 1583
MflI	RGATCY	2 cut(s)	885, 1264
MhlI	GDGCHC	3 cut(s)	48, 146, 1491
MluI	ACGCGT	1 cut(s)	227
MlyI	GAGTC	3 cut(s)	178, 188, 990
Mph1103I	ATGCAT	1 cut(s)	1742
MroXI	GAANNNNTTC	2 cut(s)	846, 1464
MseI	TTAA	9 cut(s)	342, 536, 608, 909, 1239, 1382, 1409, 1517, 1527
MspI	CCGG	3 cut(s)	127, 294, 453
MspR9I	CCNGG	6 cut(s)	419, 453, 890, 972, 1011, 1716
MvaI	CCWGG	5 cut(s)	419, 890, 972, 1011, 1716
MvnI	CGCG	2 cut(s)	79, 229
MwoI	GCNNNNNNNGC	4 cut(s)	235, 241, 515, 842
NciI	CCSGG	1 cut(s)	453
NdeII	GATC	5 cut(s)	52, 658, 885, 1264, 1583
NlaIII	CATG	9 cut(s)	304, 337, 526, 715, 1426, 1616, 1676, 1740, 1796
NlaIV	GGNNCC	2 cut(s)	371, 450
NmeAIII	GCCGAG	1 cut(s)	1455
NmuCI	GTSAC	2 cut(s)	223, 1147
NsiI	ATGCAT	1 cut(s)	1742
NspI	RCATGY	2 cut(s)	1676, 1740
NspV	TTCGAA	1 cut(s)	580
PaeI	GCATGC	1 cut(s)	1740
PaeR7I	CTCGAG	1 cut(s)	56
PagI	TCATGA	2 cut(s)	300, 333
PasI	CCCWGGG	1 cut(s)	1715
PciSI	GCTCTTC	1 cut(s)	852
PcsI	WCGNNNNNNNCGW	1 cut(s)	28
PdmI	GAANNNNTTC	2 cut(s)	846, 1464
PfeI	GAWTC	7 cut(s)	297, 307, 1386, 1418, 1751, 1811, 1927
PflFI	GACNNNGTC	1 cut(s)	11
PflMI	CCANNNNNTGG	1 cut(s)	1715
PfoI	TCCNGGA	2 cut(s)	888, 1009
PkrI	GCNGC	6 cut(s)	237, 472, 475, 511, 1604, 1633
PleI	GAGTC	3 cut(s)	178, 188, 990
PpsI	GAGTC	3 cut(s)	178, 188, 990
PpuMI	RGGWCCY	2 cut(s)	415, 448
Psp124BI	GAGCTC	1 cut(s)	48
Psp1406I	AACGTT	1 cut(s)	874
Psp5II	RGGWCCY	2 cut(s)	415, 448
Psp6I	CCWGG	5 cut(s)	417, 888, 970, 1009, 1714
PspGI	CCWGG	5 cut(s)	417, 888, 970, 1009, 1714
PspN4I	GGNNCC	2 cut(s)	371, 450
PspPI	GGNCC	4 cut(s)	247, 415, 448, 1522
PspPPI	RGGWCCY	2 cut(s)	415, 448
PstI	CTGCAG	1 cut(s)	475
PstNI	CAGNNNCTG	1 cut(s)	1502
PsuI	RGATCY	2 cut(s)	885, 1264
PsyI	GACNNNGTC	1 cut(s)	11
RsaI	GTAC	5 cut(s)	112, 125, 371, 646, 1908
RsaNI	GTAC	5 cut(s)	111, 124, 370, 645, 1907
SacI	GAGCTC	1 cut(s)	48
SalI	GTCGAC	1 cut(s)	384
SapI	GCTCTTC	1 cut(s)	852
SaqAI	TTAA	9 cut(s)	342, 536, 608, 909, 1239, 1382, 1409, 1517, 1527
SatI	GCNGC	6 cut(s)	236, 471, 474, 510, 1603, 1632
Sau3AI	GATC	5 cut(s)	52, 658, 885, 1264, 1583
Sau96I	GGNCC	4 cut(s)	247, 415, 448, 1522
SchI	GAGTC	3 cut(s)	178, 188, 990
ScrFI	CCNGG	6 cut(s)	419, 453, 890, 972, 1011, 1716
SduI	GDGCHC	3 cut(s)	48, 146, 1491
SfaNI	GCATC	3 cut(s)	1101, 1407, 1772
SfcI	CTRYAG	3 cut(s)	471, 1086, 1101
Sfr274I	CTCGAG	1 cut(s)	56
SfuI	TTCGAA	1 cut(s)	580
SinI	GGWCC	2 cut(s)	415, 448
SlaI	CTCGAG	1 cut(s)	56
SmlI	CTYRAG	5 cut(s)	26, 56, 149, 251, 374
SmoI	CTYRAG	5 cut(s)	26, 56, 149, 251, 374
SphI	GCATGC	1 cut(s)	1740
SsiI	CCGC	2 cut(s)	1602, 1944
SspMI	CTAG	4 cut(s)	855, 1310, 1677, 1731
SstI	GAGCTC	1 cut(s)	48
StyD4I	CCNGG	6 cut(s)	417, 451, 888, 970, 1009, 1714
TaaI	ACNGT	3 cut(s)	360, 684, 1202
TaiI	ACGT	5 cut(s)	12, 67, 139, 877, 1829
TaqI	TCGA	5 cut(s)	22, 57, 385, 580, 999
TatI	WGTACW	1 cut(s)	1906
TauI	GCSGC	1 cut(s)	1605
TfiI	GAWTC	7 cut(s)	297, 307, 1386, 1418, 1751, 1811, 1927
Tru1I	TTAA	9 cut(s)	342, 536, 608, 909, 1239, 1382, 1409, 1517, 1527
Tru9I	TTAA	9 cut(s)	342, 536, 608, 909, 1239, 1382, 1409, 1517, 1527
TscAI	CASTG	5 cut(s)	228, 689, 1036, 1371, 1612
TseFI	GTSAC	2 cut(s)	223, 1147
TseI	GCWGC	5 cut(s)	235, 470, 473, 509, 1631
Tsp45I	GTSAC	2 cut(s)	223, 1147
TspGWI	ACGGA	1 cut(s)	191
TspRI	CASTG	5 cut(s)	228, 689, 1036, 1371, 1612
Tth111I	GACNNNGTC	1 cut(s)	11
Van91I	CCANNNNNTGG	1 cut(s)	1715
VpaK11BI	GGWCC	2 cut(s)	415, 448
XapI	RAATTY	7 cut(s)	69, 434, 482, 1130, 1360, 1529, 1642
XbaI	TCTAGA	1 cut(s)	1730
XceI	RCATGY	2 cut(s)	1676, 1740
XhoI	CTCGAG	1 cut(s)	56
XmiI	GTMKAC	1 cut(s)	385
XmnI	GAANNNNTTC	2 cut(s)	846, 1464
XspI	CTAG	4 cut(s)	855, 1310, 1677, 1731
Zsp2I	ATGCAT	1 cut(s)	1742

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.