Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0006144

Physical Location & Seq

Genomic Coordinates Reverse (-)

19878793 .. 19883971

Gene Structure 5179 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0220900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1566 bp

ATGGATTTCGCAAAGCAGCACGCCGATATCTTCGGCGAGGACGAAGACGATGAACCTAACAACCAAGATGGGACCCATTCCTCCTCCCCCTCCTCATCCTCATCCTCCTCCTCCTCCTCTTCTTCCTCGTCGTCTGCTGCTTCGTCTTCCGGTAGCGAGAAAGGCGAGTCCAGCAGCGGCAATAGCCGAAGCGGCGCCACCACTGGCGGTGGTGGTGCCGGTGACGAAGAGGAGGAGAACGGTGAAGAGGCCACCACTAATAATGAGTACCACGATAGGGGCGATTTTGGGGACGACGACAAGGATCTGTTTGGCTCTGATAATGAAGACTACACTAGAACCCCTGCTACAAGCCCTTTCCTTATTCCCGTATTGCCTGTGGTACGGAATAATAATCATAGTCAGGGAAGAGGAAATTTTGGGCGTGGTCGTTGGCAAGCGGGGCATCAAAATGACAGAGGTGCTGGCATCCTTCCCCGACCTGGACCTTATCCGCAGAGGGGGCATAATTACGGTTATGGAAAGTTCTCAAATGGTCGTCATGACGAACGTTTCGTTTCTGAACTTAGACTGTCAAAGAGTGAAGAAACGTTATCAAGAAAGGTTATTCAGATTCAGGAACCCTGTGAACTTGCTTGCTATAGTCGGGTAGAAGGTGGAGATGTCAACTTTGATGAGAGCAGCTTGAGGCTTTTCAAGCGGCTTATTACTGAAGACATTGGAGCCGATCTTAATCAAGGCTTTGATACTTTCGTAGCAAAGAAAGATTTAGGCTCTGAAGGTTTTGGTGACCTTCTTGCCTGCATCAGGGACAAGAATATTCCACTTCAAAATATTCATTTTGTGACTTTTCGCAACAATCTCAATAAGATATTGGCCACTGCTTATATTCGGCATGAGCCTTGGGAAATGGGAGTGCATAAAAGGAATGGGGTTGTCTATCTTGATGTACATAAACTTCCGGAAAGGCCACAAAATGAGATGGATCGTCGAAGGTGTTACTGGGGATACTGTTTTGAGAGTCTTGCAACTGAAGATCCAGGAAGAGGTGATGGAGAGTTGATACATCACGTCGATGCCAATATTGAATACTGTTCAGTGATCAAAACCAAATTAGGGGCTCATCGTATTCTGATGGGCGCTGAAATGGATTGCTGCGATTCAACTGATGATGGAAGGAGATTTTACGTGGAGTTAAAGACAAGTCGTGAGTTGGAGTACCATACTGAGGAAAGATATGAGAGAGAGAAGCTCCTCAAATTTTGGATTCAATCATTCTTAGCAGGCGTTCCCTATATTGTAATTGGCTTTAGGGATGATTCAGGTCGACTTGTCCGCACAGAGAGACTAAGAACCAAAGATATAACACAGAGAGTAAAAACGAAGAACTACTGGCAGGGAGGAGTTTGCTTGGCATTTGCTGATGAGGTATTATGCTGGCTGTATGGAACAGTTAAAGAGAATGAAGATTACATATTGCAGTTTGCTCCTCCTTTCCAGCGTTTGGAGCTTCTACAAGCGCAATCTTGCCCAGAGGCAATCACTAACCACGTTGAGCAGTTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000462 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016070 GO:0016072 GO:0022613 GO:0030490 GO:0030515 GO:0030684 GO:0030686 GO:0031974 GO:0031981 GO:0032040 GO:0032991 GO:0034388 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0042274 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0046483 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

U3_assoc_6

Protein Analysis

521

Amino Acids

58.6

Weight (kDa)

5.17

Isoelectric Point (pI)

55.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RAI1	PF08652	206 - 508	1.8e-84	RAI1 like PD-(D/E)XK nuclease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006144)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G28200
fragaria_vesca	FvH4_5g29980 FvH4_5g29980 FvH4_5g29980
malus_domestica	MD08G1079900.v1.1 MD15G1066800.v1.1
prunus_persica	Prupe.4G224400_v2.0.a1
pyrus_communis	pycom08g06600 pycom15g06340
rosa_chinensis	RchiOBHm_Chr7g0223851 RchiOBHm_Chr7g0223951
rosa_laevigata	RLG00000001926
rosa_multiflora	Rmu_sc0002469.1_g000009 Rmu_sc0004540.1_g000012 Rmu_sc0004540.1_g000016
rosa_roxburghii	Rroxscaffold_3G00235230
rosa_rugosa	Rorug07G0220900
rosa_samantha	Rh7AG363500 Rh7AG364100 Rh7BG354600 Rh7BG355500 Rh7CG382100 Rh7CG382900 Rh7DG358100 Rh7DG358600
rosa_wichuraiana	Rw7G030850 Rw7G030880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	194, 215
AccB7I	CCANNNNNTGG	1 cut(s)	1504
AccI	GTMKAC	1 cut(s)	1327
AccIII	TCCGGA	1 cut(s)	961
AciI	CCGC	7 cut(s)	177, 192, 207, 440, 494, 700, 1336
AclI	AACGTT	2 cut(s)	550, 590
AclWI	GGATC	3 cut(s)	312, 993, 1031
AcoI	YGGCCR	1 cut(s)	876
AcsI	RAATTY	2 cut(s)	415, 1259
AcuI	CTGAAG	3 cut(s)	732, 798, 1053
AcyI	GRCGYC	1 cut(s)	195
AfaI	GTAC	4 cut(s)	269, 384, 951, 1220
AfiI	CCNNNNNNNGG	8 cut(s)	277, 482, 500, 807, 1046, 1116, 1228, 1504
AgsI	TTSAA	5 cut(s)	697, 830, 1088, 1164, 1271
AjiI	CACGTC	1 cut(s)	1072
AjnI	CCWGG	2 cut(s)	481, 1039
AluBI	AGCT	3 cut(s)	684, 1252, 1510
AluI	AGCT	3 cut(s)	684, 1252, 1510
Alw26I	GTCTC	1 cut(s)	1339
AlwI	GGATC	3 cut(s)	312, 993, 1031
Aor13HI	TCCGGA	1 cut(s)	961
AoxI	GGCC	3 cut(s)	249, 876, 968
ApeKI	GCWGC	5 cut(s)	16, 137, 174, 681, 1155
ApoI	RAATTY	2 cut(s)	415, 1259
ArsI	GACNNNNNNTTYG	2 cut(s)	536, 568
AspLEI	GCGC	3 cut(s)	197, 1142, 1522
AspS9I	GGNCC	2 cut(s)	72, 485
AsuHPI	GGTGA	4 cut(s)	233, 254, 800, 1061
AvaII	GGWCC	2 cut(s)	72, 485
BaeI	ACNNNNGTAYC	2 cut(s)	738, 771
BalI	TGGCCA	1 cut(s)	878
BanI	GGYRCC	2 cut(s)	194, 215
BanII	GRGCYC	1 cut(s)	1123
BarI	GAAGNNNNNNTAC	2 cut(s)	942, 974
BbsI	GAAGAC	4 cut(s)	51, 138, 333, 720
BbvI	GCAGC	5 cut(s)	28, 124, 186, 693, 1142
BccI	CCATC	5 cut(s)	62, 976, 1046, 1129, 1166
BciT130I	CCWGG	2 cut(s)	483, 1041
BciVI	GTATCC	1 cut(s)	1001
BclI	TGATCA	1 cut(s)	1101
BcoDI	GTCTC	1 cut(s)	1339
BfaI	CTAG	1 cut(s)	336
BfmI	CTRYAG	1 cut(s)	640
BfoI	RGCGCY	2 cut(s)	198, 1143
BfuI	GTATCC	1 cut(s)	1001
BglI	GCCNNNNNGGC	1 cut(s)	192
BisI	GCNGC	8 cut(s)	17, 138, 175, 178, 193, 682, 701, 1156
BlsI	GCNGC	8 cut(s)	18, 139, 176, 179, 194, 683, 702, 1157
Bme1390I	CCNGG	2 cut(s)	483, 1041
Bme18I	GGWCC	2 cut(s)	72, 485
BmgBI	CACGTC	1 cut(s)	1072
BmgT120I	GGNCC	2 cut(s)	72, 485
BmiI	GGNNCC	6 cut(s)	73, 74, 196, 217, 621, 724
BmrFI	CCNGG	2 cut(s)	483, 1041
BmrI	ACTGGG	1 cut(s)	1012
BmsI	GCATC	4 cut(s)	454, 477, 813, 1066
BmuI	ACTGGG	1 cut(s)	1012
BpiI	GAAGAC	4 cut(s)	51, 138, 333, 720
BplI	GAGNNNNNCTC	2 cut(s)	1236, 1268
BpuEI	CTTGAG	1 cut(s)	706
BsaAI	YACGTR	1 cut(s)	1189
BsaBI	GATNNNNATC	1 cut(s)	732
BsaHI	GRCGYC	1 cut(s)	195
BsaJI	CCNNGG	1 cut(s)	902
BsaWI	WCCGGW	2 cut(s)	149, 961
Bsc4I	CCNNNNNNNGG	8 cut(s)	277, 482, 500, 807, 1046, 1116, 1228, 1504
Bse118I	RCCGGY	1 cut(s)	218
Bse1I	ACTGG	3 cut(s)	208, 1007, 1397
Bse8I	GATNNNNATC	1 cut(s)	732
BseAI	TCCGGA	1 cut(s)	961
BseBI	CCWGG	2 cut(s)	483, 1041
BseDI	CCNNGG	1 cut(s)	902
BseGI	GGATG	4 cut(s)	95, 101, 468, 1321
BseJI	GATNNNNATC	1 cut(s)	732
BseLI	CCNNNNNNNGG	8 cut(s)	277, 482, 500, 807, 1046, 1116, 1228, 1504
BseMII	CTCAG	1 cut(s)	1218
BseNI	ACTGG	3 cut(s)	208, 1007, 1397
BseXI	GCAGC	5 cut(s)	28, 124, 186, 693, 1142
BshFI	GGCC	3 cut(s)	251, 878, 970
BshNI	GGYRCC	2 cut(s)	194, 215
BsiSI	CCGG	3 cut(s)	150, 219, 962
BslFI	GGGAC	3 cut(s)	85, 305, 824
BslI	CCNNNNNNNGG	8 cut(s)	277, 482, 500, 807, 1046, 1116, 1228, 1504
BsmAI	GTCTC	1 cut(s)	1339
BsmFI	GGGAC	3 cut(s)	85, 305, 824
BsnI	GGCC	3 cut(s)	251, 878, 970
Bsp1286I	GDGCHC	1 cut(s)	1123
Bsp13I	TCCGGA	1 cut(s)	961
Bsp1407I	TGTACA	1 cut(s)	949
Bsp143I	GATC	5 cut(s)	304, 727, 985, 1036, 1101
BspACI	CCGC	7 cut(s)	177, 192, 207, 440, 494, 700, 1336
BspANI	GGCC	3 cut(s)	251, 878, 970
BspCNI	CTCAG	1 cut(s)	1219
BspEI	TCCGGA	1 cut(s)	961
BspHI	TCATGA	1 cut(s)	541
BspLI	GGNNCC	6 cut(s)	73, 74, 196, 217, 621, 724
BspPI	GGATC	3 cut(s)	312, 993, 1031
BspT107I	GGYRCC	2 cut(s)	194, 215
BsrFI	RCCGGY	1 cut(s)	218
BsrGI	TGTACA	1 cut(s)	949
BsrI	ACTGG	3 cut(s)	208, 1007, 1397
BssAI	RCCGGY	1 cut(s)	218
BssECI	CCNNGG	1 cut(s)	902
BssMI	GATC	5 cut(s)	304, 727, 985, 1036, 1101
BssNI	GRCGYC	1 cut(s)	195
BssT1I	CCWWGG	1 cut(s)	902
Bst2UI	CCWGG	2 cut(s)	483, 1041
Bst4CI	ACNGT	6 cut(s)	242, 515, 573, 1013, 1094, 1453
Bst6I	CTCTTC	5 cut(s)	124, 222, 240, 403, 1039
BstACI	GRCGYC	1 cut(s)	195
BstAUI	TGTACA	1 cut(s)	949
BstBAI	YACGTR	1 cut(s)	1189
BstC8I	GCNNGC	7 cut(s)	21, 438, 466, 637, 802, 1285, 1439
BstDEI	CTNAG	4 cut(s)	566, 1227, 1279, 1349
BstEII	GGTNACC	1 cut(s)	788
BstENI	CCTNNNNNAGG	1 cut(s)	805
BstF5I	GGATG	4 cut(s)	95, 101, 468, 1321
BstH2I	RGCGCY	2 cut(s)	198, 1143
BstHHI	GCGC	3 cut(s)	197, 1142, 1522
BstKTI	GATC	5 cut(s)	307, 730, 988, 1039, 1104
BstMAI	GTCTC	1 cut(s)	1339
BstMBI	GATC	5 cut(s)	304, 727, 985, 1036, 1101
BstMWI	GCNNNNNNNGC	8 cut(s)	162, 171, 183, 192, 442, 502, 697, 1507
BstNI	CCWGG	2 cut(s)	483, 1041
BstPI	GGTNACC	1 cut(s)	788
BstSCI	CCNGG	2 cut(s)	481, 1039
BstSFI	CTRYAG	1 cut(s)	640
BstV1I	GCAGC	5 cut(s)	28, 124, 186, 693, 1142
BstV2I	GAAGAC	4 cut(s)	51, 138, 333, 720
BstX2I	RGATCY	2 cut(s)	304, 1036
BstYI	RGATCY	2 cut(s)	304, 1036
BsuI	GTATCC	1 cut(s)	1001
BsuRI	GGCC	3 cut(s)	251, 878, 970
BtrI	CACGTC	1 cut(s)	1072
BtsCI	GGATG	4 cut(s)	95, 101, 468, 1321
BtsI	GCAGTG	1 cut(s)	879
BtsIMutI	CAGTG	3 cut(s)	201, 879, 1104
Cac8I	GCNNGC	7 cut(s)	21, 438, 466, 637, 802, 1285, 1439
CciI	TCATGA	1 cut(s)	541
CfoI	GCGC	3 cut(s)	197, 1142, 1522
Cfr10I	RCCGGY	1 cut(s)	218
Cfr13I	GGNCC	2 cut(s)	72, 485
Csp6I	GTAC	4 cut(s)	268, 383, 950, 1219
CviAII	CATG	2 cut(s)	542, 896
CviQI	GTAC	4 cut(s)	268, 383, 950, 1219
DdeI	CTNAG	4 cut(s)	566, 1227, 1279, 1349
DinI	GGCGCC	1 cut(s)	196
DpnI	GATC	5 cut(s)	306, 729, 987, 1038, 1103
DpnII	GATC	5 cut(s)	304, 727, 985, 1036, 1101
EaeI	YGGCCR	1 cut(s)	876
Eam1104I	CTCTTC	5 cut(s)	124, 222, 240, 403, 1039
EarI	CTCTTC	5 cut(s)	124, 222, 240, 403, 1039
Eco130I	CCWWGG	1 cut(s)	902
Eco24I	GRGCYC	1 cut(s)	1123
Eco32I	GATATC	1 cut(s)	28
Eco47I	GGWCC	2 cut(s)	72, 485
Eco57I	CTGAAG	3 cut(s)	732, 798, 1053
Eco91I	GGTNACC	1 cut(s)	788
EcoNI	CCTNNNNNAGG	1 cut(s)	805
EcoO109I	RGGNCCY	1 cut(s)	72
EcoO65I	GGTNACC	1 cut(s)	788
EcoRII	CCWGG	2 cut(s)	481, 1039
EcoRV	GATATC	1 cut(s)	28
EcoT14I	CCWWGG	1 cut(s)	902
EcoT38I	GRGCYC	1 cut(s)	1123
EgeI	GGCGCC	1 cut(s)	196
EheI	GGCGCC	1 cut(s)	196
ErhI	CCWWGG	1 cut(s)	902
FaeI	CATG	2 cut(s)	545, 899
FaqI	GGGAC	3 cut(s)	85, 305, 824
FatI	CATG	2 cut(s)	541, 895
FauI	CCCGC	1 cut(s)	433
FbaI	TGATCA	1 cut(s)	1101
FblI	GTMKAC	1 cut(s)	1327
Fnu4HI	GCNGC	8 cut(s)	17, 138, 175, 178, 193, 682, 701, 1156
FokI	GGATG	4 cut(s)	82, 88, 455, 1328
FriOI	GRGCYC	1 cut(s)	1123
Fsp4HI	GCNGC	8 cut(s)	17, 138, 175, 178, 193, 682, 701, 1156
FspBI	CTAG	1 cut(s)	336
GlaI	GCGC	3 cut(s)	196, 1141, 1521
GluI	GCNGC	8 cut(s)	17, 138, 175, 178, 193, 682, 701, 1156
HaeII	RGCGCY	2 cut(s)	198, 1143
HaeIII	GGCC	3 cut(s)	251, 878, 970
HapII	CCGG	3 cut(s)	150, 219, 962
HhaI	GCGC	3 cut(s)	197, 1142, 1522
Hin1I	GRCGYC	1 cut(s)	195
Hin1II	CATG	2 cut(s)	545, 899
Hin6I	GCGC	3 cut(s)	195, 1140, 1520
HinP1I	GCGC	3 cut(s)	195, 1140, 1520
HincII	GTYRAC	2 cut(s)	667, 1328
HindII	GTYRAC	2 cut(s)	667, 1328
HinfI	GANTC	6 cut(s)	167, 613, 1021, 1160, 1267, 1319
HpaII	CCGG	3 cut(s)	150, 219, 962
HphI	GGTGA	4 cut(s)	233, 254, 800, 1061
Hpy166II	GTNNAC	3 cut(s)	629, 667, 1328
Hpy188I	TCNGA	5 cut(s)	319, 562, 612, 778, 1134
Hpy188III	TCNNGA	6 cut(s)	542, 597, 617, 944, 962, 1208
Hpy8I	GTNNAC	3 cut(s)	629, 667, 1328
Hpy99I	CGWCG	4 cut(s)	133, 299, 993, 1076
HpyAV	CCTTC	6 cut(s)	482, 647, 773, 803, 987, 1170
HpyCH4III	ACNGT	6 cut(s)	242, 515, 573, 1013, 1094, 1453
HpyCH4IV	ACGT	5 cut(s)	550, 590, 1071, 1188, 1551
HpyCH4V	TGCA	4 cut(s)	804, 919, 1028, 1480
HpyF10VI	GCNNNNNNNGC	8 cut(s)	162, 171, 183, 192, 442, 502, 697, 1507
HpyF3I	CTNAG	4 cut(s)	566, 1227, 1279, 1349
HpySE526I	ACGT	5 cut(s)	550, 590, 1071, 1188, 1551
Hsp92I	GRCGYC	1 cut(s)	195
Hsp92II	CATG	2 cut(s)	545, 899
HspAI	GCGC	3 cut(s)	195, 1140, 1520
KasI	GGCGCC	1 cut(s)	194
KflI	GGGWCCC	1 cut(s)	72
Kpn2I	TCCGGA	1 cut(s)	961
Ksp22I	TGATCA	1 cut(s)	1101
Kzo9I	GATC	5 cut(s)	304, 727, 985, 1036, 1101
LmnI	GCTCC	4 cut(s)	722, 1257, 1492, 1507
Lsp1109I	GCAGC	5 cut(s)	28, 124, 186, 693, 1142
LweI	GCATC	4 cut(s)	454, 477, 813, 1066
MaeI	CTAG	1 cut(s)	336
MaeII	ACGT	5 cut(s)	550, 590, 1071, 1188, 1551
MaeIII	GTNAC	4 cut(s)	221, 788, 844, 998
MalI	GATC	5 cut(s)	306, 729, 987, 1038, 1103
MboI	GATC	5 cut(s)	304, 727, 985, 1036, 1101
MflI	RGATCY	2 cut(s)	304, 1036
MhlI	GDGCHC	1 cut(s)	1123
MlsI	TGGCCA	1 cut(s)	878
MluCI	AATT	5 cut(s)	415, 508, 1112, 1259, 1302
MluNI	TGGCCA	1 cut(s)	878
Mly113I	GGCGCC	1 cut(s)	195
MlyI	GAGTC	2 cut(s)	176, 1030
MmeI	TCCRAC	1 cut(s)	1194
Mox20I	TGGCCA	1 cut(s)	878
MroI	TCCGGA	1 cut(s)	961
MscI	TGGCCA	1 cut(s)	878
MseI	TTAA	3 cut(s)	732, 1196, 1455
MslI	CAYNNNNRTG	2 cut(s)	450, 1074
Msp20I	TGGCCA	1 cut(s)	878
MspA1I	CMGCKG	1 cut(s)	177
MspI	CCGG	3 cut(s)	150, 219, 962
MspR9I	CCNGG	2 cut(s)	483, 1041
MvaI	CCWGG	2 cut(s)	483, 1041
MwoI	GCNNNNNNNGC	8 cut(s)	162, 171, 183, 192, 442, 502, 697, 1507
NarI	GGCGCC	1 cut(s)	195
NdeII	GATC	5 cut(s)	304, 727, 985, 1036, 1101
NlaIII	CATG	2 cut(s)	545, 899
NlaIV	GGNNCC	6 cut(s)	73, 74, 196, 217, 621, 724
NmuCI	GTSAC	3 cut(s)	221, 788, 844
PagI	TCATGA	1 cut(s)	541
PcsI	WCGNNNNNNNCGW	3 cut(s)	39, 279, 552
PfeI	GAWTC	4 cut(s)	613, 1160, 1267, 1319
PflMI	CCANNNNNTGG	1 cut(s)	1504
PfoI	TCCNGGA	1 cut(s)	1039
PkrI	GCNGC	8 cut(s)	18, 139, 176, 179, 194, 683, 702, 1157
PleI	GAGTC	2 cut(s)	175, 1029
PluTI	GGCGCC	1 cut(s)	198
PpsI	GAGTC	2 cut(s)	175, 1029
Ppu21I	YACGTR	1 cut(s)	1189
PpuMI	RGGWCCY	1 cut(s)	72
Psp1406I	AACGTT	2 cut(s)	550, 590
Psp5II	RGGWCCY	1 cut(s)	72
Psp6I	CCWGG	2 cut(s)	481, 1039
PspEI	GGTNACC	1 cut(s)	788
PspGI	CCWGG	2 cut(s)	481, 1039
PspN4I	GGNNCC	6 cut(s)	73, 74, 196, 217, 621, 724
PspPI	GGNCC	2 cut(s)	72, 485
PspPPI	RGGWCCY	1 cut(s)	72
PsrI	GAACNNNNNNTAC	2 cut(s)	331, 363
PsuI	RGATCY	2 cut(s)	304, 1036
RsaI	GTAC	4 cut(s)	269, 384, 951, 1220
RsaNI	GTAC	4 cut(s)	268, 383, 950, 1219
RseI	CAYNNNNRTG	2 cut(s)	450, 1074
SalI	GTCGAC	1 cut(s)	1326
SaqAI	TTAA	3 cut(s)	732, 1196, 1455
SatI	GCNGC	8 cut(s)	17, 138, 175, 178, 193, 682, 701, 1156
Sau3AI	GATC	5 cut(s)	304, 727, 985, 1036, 1101
Sau96I	GGNCC	2 cut(s)	72, 485
SchI	GAGTC	2 cut(s)	176, 1030
ScrFI	CCNGG	2 cut(s)	483, 1041
SduI	GDGCHC	1 cut(s)	1123
SfaNI	GCATC	4 cut(s)	454, 477, 813, 1066
SfcI	CTRYAG	1 cut(s)	640
SfoI	GGCGCC	1 cut(s)	196
SinI	GGWCC	2 cut(s)	72, 485
SmiMI	CAYNNNNRTG	2 cut(s)	450, 1074
SmlI	CTYRAG	1 cut(s)	685
SmoI	CTYRAG	1 cut(s)	685
Sse9I	AATT	5 cut(s)	415, 508, 1112, 1259, 1302
SsiI	CCGC	7 cut(s)	177, 192, 207, 440, 494, 700, 1336
SspDI	GGCGCC	1 cut(s)	194
SspI	AATATT	3 cut(s)	820, 835, 1084
SspMI	CTAG	1 cut(s)	336
StyD4I	CCNGG	2 cut(s)	481, 1039
StyI	CCWWGG	1 cut(s)	902
TaaI	ACNGT	6 cut(s)	242, 515, 573, 1013, 1094, 1453
TaiI	ACGT	5 cut(s)	553, 593, 1074, 1191, 1554
TaqI	TCGA	3 cut(s)	991, 1074, 1327
TasI	AATT	5 cut(s)	415, 508, 1112, 1259, 1302
TatI	WGTACW	1 cut(s)	949
TauI	GCSGC	3 cut(s)	180, 195, 703
TfiI	GAWTC	4 cut(s)	613, 1160, 1267, 1319
Tru1I	TTAA	3 cut(s)	732, 1196, 1455
Tru9I	TTAA	3 cut(s)	732, 1196, 1455
TscAI	CASTG	3 cut(s)	208, 886, 1104
TseFI	GTSAC	3 cut(s)	221, 788, 844
TseI	GCWGC	5 cut(s)	16, 137, 174, 681, 1155
Tsp45I	GTSAC	3 cut(s)	221, 788, 844
TspDTI	ATGAA	4 cut(s)	66, 339, 827, 1479
TspGWI	ACGGA	1 cut(s)	400
TspRI	CASTG	3 cut(s)	208, 886, 1104
Van91I	CCANNNNNTGG	1 cut(s)	1504
VpaK11BI	GGWCC	2 cut(s)	72, 485
XagI	CCTNNNNNAGG	1 cut(s)	805
XapI	RAATTY	2 cut(s)	415, 1259
XmiI	GTMKAC	1 cut(s)	1327
XspI	CTAG	1 cut(s)	336

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.