Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr8

Orthogroup ID

OG0006144

Physical Location & Seq

Genomic Coordinates Forward (+)

5149453 .. 5152466

Gene Structure 3014 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom08g06600.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2052 bp

ATGGCGGATGTGGTCCAGTACCGGATGGAGCGTATGCTCCCGGAGTTGGACGACCTGGAGAAGGAGGAACTGTTCACGAGACGTGAGCTTGCTGAGATTGTCAAGCAGCGTCGCAATTTTGAATTCCGGCTCAAGCGGCCGAGCCCACTCAAGGAGGACTACCTTGCCTACATTGACTACGAGACTAAGGTCGACAAGCTAAGGCGCTTGAGGAAAAAGGCAAAGTTGCCGGAGCGGGAAGATAACGAGGAGACGAAGAAGAAGAAGAGGAAGAGGAAGTCGGTTTCAGACTTTGCTGGCGTCAGGAGGATTCTTGATATTTATAGGCTTGCTGTCACTAGGTTCACTGGTGATCTTGAACTCTGGTTTCGCTACCTTGACTTTTGTAAAGAGCGCCGAAATGGTAGGATCAAGGAGGTCTTGAATAAGGTAATTGGGTTTCATTCCAAGCAGCCATCTGTTTGGATTTATAAAGCTGCTTGGGAATTCGACAACTACTCAAATGTCGAAGCTGCCCGTAATACAATGCTACAGGGGTTGAGATTTTGCAAAAATTCAGAAGATCTTTGGTTGGAGTATCTCCGGATGGAACTCACATTCCTTAATAAACTAAAGGCTCGAAAGGTTGCTCTTGGAGAGGATGAGGGCAGTCTGGTTCGTGATAAGATTAGTGCTGATGAGCAACAGTGGAAAAGTGAAAACAAAGATTTATACATGCCCCTCAAAGAAGAAAGAGAAATTGATGAAAATAATGAAGGGTCAGATATTGAAGAAAGCAAATCAAGGAAGAAAGTTGATAAGTTACAAGAGGTAGGTTGTGGTGTGATAAAAACCATATACAGTGAAGCAGTTAAAGCTCTTCCCTCTAGCTTTACACTGAGAAAGCGGTTTTTAGAGATATTGAAATCTATCAACTTGGCTAAATCTGGGGAAATGGGTGAGGAAGTACTAAGTGACATGAAGAGAGACTTCTCAACAGAGCCAGAGTATTGGGATTGGCTTGCTAAATTTGAATACAATCCTGCAAGTGCACAAGAGGAGACGTGTGAAGAAATAACATTTTCTTGTATGGGAAAAGCCATTCAGGTCTATGAGGATGCCATACAAGTTTTGCCTTCGGCCAAAATGTTCAAGCACTATGCAAAGTTTCTCATGGGTGCTGTAGCTCTTCTAGTAGGAGACAATGAGACTTCTCTAGACAATCAATCTGCTAGTTATGTTTCACGTCTTTTGGGCCTTTACCAAAAGGCTGATACAATTGGGTGCACTGATGAGGAACTTGCCTGTGAACATATTTCATTATATTTGCAACTTGGAAGAGTGGATGAAGCTCGGAGACTGGCACACAATCTTTGTTGTGGAAAATTTCCAAATTCAGCAAAGGTGTGGGTATTATGGGCCTCTATAGGAATGAAGCACTCGACAAGGGATCGTATTTCTTCGAGCAAAGATAAGCTGCTATCGATCTTTGAACTTGTAAAAGATGGTTTGACAAGACTGTCAATTTCAGAAGCCGAGAGCTTGTGGGTAATGGCCCTTAAATTCTTTGCCAGTCAAAAACATTATTTTGACATGTTGGTTGAGGTTGCTGTTACATCGTTAATTAAATATCGTGGCAGTGACGAAGGATTTTCCCTCTCTTCTATTATTGTGAATTTTGTTCTTCAAAAAGATGGAATTGCGCATGCTAGAGTGATGTATAAGCGCTTTACGGCTTTACCACGCCCTGGGCTAGTTCTATATAGGACCTGCATAGAATTGGAAACAAACCTTGCATCAAATGGTGATAAAACTGGTCTTGAAAATGCCCGGAAGTTGTATTTTTCTGCACTTCAGACTTATGACCAAGATTCGAGCTTGTGGCGAGATTACTGGCTTATGGAGACCAAGATGGGAACATCAAAGACAGCTTCCGACGTATCTTGGCGTGCACCAGTCTCTTGCCTTTTGAATCATTGCTCCGGGTTCTCCAACTCCATCGATTTCAATCTTCCATGTTCTTGGCCAGTTGAAGGCGATGGAGTGGTGACGTTCGGAAGAGAAGATAGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000462 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016070 GO:0016072 GO:0022613 GO:0030490 GO:0030515 GO:0030684 GO:0030686 GO:0031974 GO:0031981 GO:0032040 GO:0032991 GO:0034388 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0042274 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0046483 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

U3_assoc_6

Protein Analysis

684

Amino Acids

79.01

Weight (kDa)

7.45

Isoelectric Point (pI)

45.91

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006144)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G28200
fragaria_vesca	FvH4_5g29980 FvH4_5g29980 FvH4_5g29980
malus_domestica	MD08G1079900.v1.1 MD15G1066800.v1.1
prunus_persica	Prupe.4G224400_v2.0.a1
pyrus_communis	pycom08g06600 pycom15g06340
rosa_chinensis	RchiOBHm_Chr7g0223851 RchiOBHm_Chr7g0223951
rosa_laevigata	RLG00000001926
rosa_multiflora	Rmu_sc0002469.1_g000009 Rmu_sc0004540.1_g000012 Rmu_sc0004540.1_g000016
rosa_roxburghii	Rroxscaffold_3G00235230
rosa_rugosa	Rorug07G0220900
rosa_samantha	Rh7AG363500 Rh7AG364100 Rh7BG354600 Rh7BG355500 Rh7CG382100 Rh7CG382900 Rh7DG358100 Rh7DG358600
rosa_wichuraiana	Rw7G030850 Rw7G030880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	471
AasI	GACNNNNNNGTC	1 cut(s)	1498
Acc16I	TGCGCA	1 cut(s)	1683
Acc36I	ACCTGC	1 cut(s)	1757
AccB7I	CCANNNNNTGG	1 cut(s)	1727
AccBSI	CCGCTC	1 cut(s)	235
AccI	GTMKAC	1 cut(s)	192
AccIII	TCCGGA	1 cut(s)	582
AciI	CCGC	4 cut(s)	5, 136, 235, 886
AclWI	GGATC	2 cut(s)	416, 1437
AcoI	YGGCCR	3 cut(s)	137, 1119, 2003
AcsI	RAATTY	8 cut(s)	122, 485, 553, 1007, 1364, 1372, 1541, 1654
AcuI	CTGAAG	1 cut(s)	1817
AcyI	GRCGYC	1 cut(s)	300
AfaI	GTAC	2 cut(s)	20, 948
AfeI	AGCGCT	1 cut(s)	1706
AfiI	CCNNNNNNNGG	5 cut(s)	46, 61, 151, 1727, 2012
AflIII	ACRYGT	2 cut(s)	1043, 1572
AjiI	CACGTC	3 cut(s)	83, 1044, 1226
AjnI	CCWGG	2 cut(s)	54, 1726
AloI	GAACNNNNNNTCC	4 cut(s)	56, 88, 582, 614
Alw21I	GWGCWC	3 cut(s)	1033, 1268, 1933
Alw44I	GTGCAC	3 cut(s)	1029, 1264, 1929
AlwI	GGATC	2 cut(s)	416, 1437
Aor13HI	TCCGGA	1 cut(s)	582
Aor51HI	AGCGCT	1 cut(s)	1706
AoxI	GGCC	6 cut(s)	137, 1119, 1234, 1398, 1533, 2003
ApaLI	GTGCAC	3 cut(s)	1029, 1264, 1929
ApeKI	GCWGC	5 cut(s)	106, 451, 476, 512, 1456
ApoI	RAATTY	8 cut(s)	122, 485, 553, 1007, 1364, 1372, 1541, 1654
AspLEI	GCGC	4 cut(s)	207, 396, 1684, 1707
AspS9I	GGNCC	5 cut(s)	13, 1234, 1398, 1534, 1746
AsuC2I	CCSGG	3 cut(s)	41, 1810, 1963
AsuHPI	GGTGA	4 cut(s)	362, 950, 1796, 2038
AvaII	GGWCC	2 cut(s)	13, 1746
BaeGI	GKGCMC	3 cut(s)	1033, 1268, 1933
BalI	TGGCCA	1 cut(s)	2005
BanII	GRGCYC	1 cut(s)	146
BauI	CACGAG	1 cut(s)	76
Bbv12I	GWGCWC	3 cut(s)	1033, 1268, 1933
BbvI	GCAGC	5 cut(s)	118, 463, 463, 499, 1443
BccI	CCATC	8 cut(s)	19, 463, 580, 1478, 1667, 1885, 1985, 2012
BceAI	ACGGC	1 cut(s)	1728
BciT130I	CCWGG	2 cut(s)	56, 1728
BcnI	CCSGG	3 cut(s)	41, 1810, 1963
BfaI	CTAG	8 cut(s)	339, 867, 1172, 1196, 1212, 1689, 1733, 2050
BfmI	CTRYAG	3 cut(s)	530, 1161, 1404
BfoI	RGCGCY	3 cut(s)	208, 397, 1708
BfuAI	ACCTGC	1 cut(s)	1757
BglII	AGATCT	1 cut(s)	562
BisI	GCNGC	6 cut(s)	107, 137, 452, 477, 513, 1457
BlsI	GCNGC	6 cut(s)	108, 138, 453, 478, 514, 1458
BmcAI	AGTACT	1 cut(s)	948
Bme1390I	CCNGG	5 cut(s)	41, 56, 1728, 1810, 1963
Bme18I	GGWCC	2 cut(s)	13, 1746
BmgBI	CACGTC	3 cut(s)	83, 1044, 1226
BmgT120I	GGNCC	5 cut(s)	13, 1234, 1398, 1534, 1746
BmrFI	CCNGG	5 cut(s)	41, 56, 1728, 1810, 1963
BmsI	GCATC	2 cut(s)	1087, 1784
BoxI	GACNNNNGTC	1 cut(s)	188
BpmI	CTGGAG	1 cut(s)	77
Bpu10I	CCTNAGC	1 cut(s)	200
BpuEI	CTTGAG	3 cut(s)	116, 134, 229
BpuMI	CCSGG	3 cut(s)	41, 1810, 1963
Bsa29I	ATCGAT	2 cut(s)	1463, 1980
BsaBI	GATNNNNATC	1 cut(s)	1986
BsaHI	GRCGYC	1 cut(s)	300
BsaI	GGTCTC	1 cut(s)	1877
BsaJI	CCNNGG	2 cut(s)	1726, 1727
BsaWI	WCCGGW	2 cut(s)	21, 582
BsaXI	ACNNNNNCTCC	2 cut(s)	56, 86
Bsc4I	CCNNNNNNNGG	5 cut(s)	46, 61, 151, 1727, 2012
Bse1I	ACTGG	8 cut(s)	16, 352, 1344, 1551, 1798, 1877, 1934, 2006
Bse3DI	GCAATG	1 cut(s)	1954
Bse8I	GATNNNNATC	1 cut(s)	1986
BseAI	TCCGGA	1 cut(s)	582
BseBI	CCWGG	2 cut(s)	56, 1728
BseCI	ATCGAT	2 cut(s)	1463, 1980
BseDI	CCNNGG	2 cut(s)	1726, 1727
BseGI	GGATG	6 cut(s)	13, 30, 591, 646, 1102, 1330
BseJI	GATNNNNATC	1 cut(s)	1986
BseLI	CCNNNNNNNGG	5 cut(s)	46, 61, 151, 1727, 2012
BseMI	GCAATG	1 cut(s)	1954
BseMII	CTCAG	2 cut(s)	84, 869
BseNI	ACTGG	8 cut(s)	16, 352, 1344, 1551, 1798, 1877, 1934, 2006
BseRI	GAGGAG	2 cut(s)	263, 1052
BseSI	GKGCMC	3 cut(s)	1033, 1268, 1933
BseX3I	CGGCCG	1 cut(s)	137
BseXI	GCAGC	5 cut(s)	118, 463, 463, 499, 1443
BsgI	GTGCAG	1 cut(s)	1812
Bsh1285I	CGRYCG	1 cut(s)	140
BshFI	GGCC	6 cut(s)	139, 1121, 1236, 1400, 1535, 2005
BshVI	ATCGAT	2 cut(s)	1463, 1980
BsiEI	CGRYCG	1 cut(s)	140
BsiHKAI	GWGCWC	3 cut(s)	1033, 1268, 1933
BsiSI	CCGG	7 cut(s)	22, 41, 127, 230, 583, 1810, 1962
BslI	CCNNNNNNNGG	5 cut(s)	46, 61, 151, 1727, 2012
BsmBI	CGTCTC	3 cut(s)	73, 245, 1034
BsnI	GGCC	6 cut(s)	139, 1121, 1236, 1400, 1535, 2005
Bso31I	GGTCTC	1 cut(s)	1877
Bsp1286I	GDGCHC	4 cut(s)	146, 1033, 1268, 1933
Bsp13I	TCCGGA	1 cut(s)	582
Bsp143I	GATC	5 cut(s)	352, 408, 562, 1429, 1464
BspACI	CCGC	4 cut(s)	5, 136, 235, 886
BspANI	GGCC	6 cut(s)	139, 1121, 1236, 1400, 1535, 2005
BspCNI	CTCAG	2 cut(s)	85, 870
BspDI	ATCGAT	2 cut(s)	1463, 1980
BspEI	TCCGGA	1 cut(s)	582
BspMI	ACCTGC	1 cut(s)	1757
BspPI	GGATC	2 cut(s)	416, 1437
BspQI	GCTCTTC	2 cut(s)	864, 1173
BspTNI	GGTCTC	1 cut(s)	1877
BsrBI	CCGCTC	1 cut(s)	235
BsrDI	GCAATG	1 cut(s)	1954
BsrI	ACTGG	8 cut(s)	16, 352, 1344, 1551, 1798, 1877, 1934, 2006
BssECI	CCNNGG	2 cut(s)	1726, 1727
BssMI	GATC	5 cut(s)	352, 408, 562, 1429, 1464
BssNI	GRCGYC	1 cut(s)	300
BssSI	CACGAG	1 cut(s)	76
Bst2BI	CACGAG	1 cut(s)	76
Bst2UI	CCWGG	2 cut(s)	56, 1728
Bst4CI	ACNGT	4 cut(s)	72, 687, 842, 1500
Bst6I	CTCTTC	8 cut(s)	260, 266, 864, 956, 1173, 1312, 1645, 2032
BstACI	GRCGYC	1 cut(s)	300
BstC8I	GCNNGC	6 cut(s)	90, 298, 330, 1002, 1686, 1929
BstDEI	CTNAG	5 cut(s)	93, 186, 200, 878, 950
BstENI	CCTNNNNNAGG	1 cut(s)	59
BstF5I	GGATG	6 cut(s)	13, 30, 591, 646, 1102, 1330
BstH2I	RGCGCY	3 cut(s)	208, 397, 1708
BstHHI	GCGC	4 cut(s)	207, 396, 1684, 1707
BstKTI	GATC	5 cut(s)	355, 411, 565, 1432, 1467
BstMBI	GATC	5 cut(s)	352, 408, 562, 1429, 1464
BstMCI	CGRYCG	1 cut(s)	140
BstMWI	GCNNNNNNNGC	2 cut(s)	136, 854
BstNI	CCWGG	2 cut(s)	56, 1728
BstNSI	RCATGY	3 cut(s)	718, 1576, 1688
BstPAI	GACNNNNGTC	1 cut(s)	188
BstSCI	CCNGG	5 cut(s)	39, 54, 1726, 1808, 1961
BstSFI	CTRYAG	3 cut(s)	530, 1161, 1404
BstSLI	GKGCMC	3 cut(s)	1033, 1268, 1933
BstV1I	GCAGC	5 cut(s)	118, 463, 463, 499, 1443
BstX2I	RGATCY	1 cut(s)	562
BstXI	CCANNNNNNTGG	3 cut(s)	462, 990, 2001
BstYI	RGATCY	1 cut(s)	562
BstZI	CGGCCG	1 cut(s)	137
Bsu15I	ATCGAT	2 cut(s)	1463, 1980
BsuRI	GGCC	6 cut(s)	139, 1121, 1236, 1400, 1535, 2005
BsuTUI	ATCGAT	2 cut(s)	1463, 1980
BtgZI	GCGATG	1 cut(s)	2031
BtrI	CACGTC	3 cut(s)	83, 1044, 1226
BtsCI	GGATG	6 cut(s)	13, 30, 591, 646, 1102, 1330
BtsI	GCAGTG	1 cut(s)	1624
BtsIMutI	CAGTG	6 cut(s)	345, 692, 847, 875, 1266, 1624
BveI	ACCTGC	1 cut(s)	1757
Cac8I	GCNNGC	6 cut(s)	90, 298, 330, 1002, 1686, 1929
CfoI	GCGC	4 cut(s)	207, 396, 1684, 1707
Cfr13I	GGNCC	5 cut(s)	13, 1234, 1398, 1534, 1746
ClaI	ATCGAT	2 cut(s)	1463, 1980
CseI	GACGC	2 cut(s)	98, 289
Csp6I	GTAC	2 cut(s)	19, 947
CviAII	CATG	6 cut(s)	715, 958, 1153, 1573, 1685, 1995
CviQI	GTAC	2 cut(s)	19, 947
DdeI	CTNAG	5 cut(s)	93, 186, 200, 878, 950
DpnI	GATC	5 cut(s)	354, 410, 564, 1431, 1466
DpnII	GATC	5 cut(s)	352, 408, 562, 1429, 1464
DrdI	GACNNNNNNGTC	1 cut(s)	1498
DseDI	GACNNNNNNGTC	1 cut(s)	1498
EaeI	YGGCCR	3 cut(s)	137, 1119, 2003
EagI	CGGCCG	1 cut(s)	137
Eam1104I	CTCTTC	8 cut(s)	260, 266, 864, 956, 1173, 1312, 1645, 2032
EarI	CTCTTC	8 cut(s)	260, 266, 864, 956, 1173, 1312, 1645, 2032
EciI	GGCGGA	1 cut(s)	20
EclXI	CGGCCG	1 cut(s)	137
Eco24I	GRGCYC	1 cut(s)	146
Eco31I	GGTCTC	1 cut(s)	1877
Eco47I	GGWCC	2 cut(s)	13, 1746
Eco47III	AGCGCT	1 cut(s)	1706
Eco52I	CGGCCG	1 cut(s)	137
Eco57I	CTGAAG	1 cut(s)	1817
EcoNI	CCTNNNNNAGG	1 cut(s)	59
EcoO109I	RGGNCCY	1 cut(s)	1746
EcoRI	GAATTC	2 cut(s)	122, 485
EcoRII	CCWGG	2 cut(s)	54, 1726
EcoT38I	GRGCYC	1 cut(s)	146
Esp3I	CGTCTC	3 cut(s)	73, 245, 1034
FaeI	CATG	6 cut(s)	718, 961, 1156, 1576, 1688, 1998
FalI	AAGNNNNNCTT	4 cut(s)	404, 436, 953, 985
FatI	CATG	6 cut(s)	714, 957, 1152, 1572, 1684, 1994
FauI	CCCGC	1 cut(s)	228
FblI	GTMKAC	1 cut(s)	192
Fnu4HI	GCNGC	6 cut(s)	107, 137, 452, 477, 513, 1457
FokI	GGATG	6 cut(s)	20, 37, 598, 653, 1109, 1337
FriOI	GRGCYC	1 cut(s)	146
Fsp4HI	GCNGC	6 cut(s)	107, 137, 452, 477, 513, 1457
FspBI	CTAG	8 cut(s)	339, 867, 1172, 1196, 1212, 1689, 1733, 2050
FspI	TGCGCA	1 cut(s)	1683
GlaI	GCGC	4 cut(s)	206, 395, 1683, 1706
GluI	GCNGC	6 cut(s)	107, 137, 452, 477, 513, 1457
GsuI	CTGGAG	1 cut(s)	77
HaeII	RGCGCY	3 cut(s)	208, 397, 1708
HaeIII	GGCC	6 cut(s)	139, 1121, 1236, 1400, 1535, 2005
HapII	CCGG	7 cut(s)	22, 41, 127, 230, 583, 1810, 1962
HgaI	GACGC	2 cut(s)	98, 289
HhaI	GCGC	4 cut(s)	207, 396, 1684, 1707
Hin1I	GRCGYC	1 cut(s)	300
Hin1II	CATG	6 cut(s)	718, 961, 1156, 1576, 1688, 1998
Hin6I	GCGC	4 cut(s)	205, 394, 1682, 1705
HinP1I	GCGC	4 cut(s)	205, 394, 1682, 1705
HincII	GTYRAC	1 cut(s)	193
HindII	GTYRAC	1 cut(s)	193
HinfI	GANTC	3 cut(s)	310, 1850, 1951
HpaII	CCGG	7 cut(s)	22, 41, 127, 230, 583, 1810, 1962
HphI	GGTGA	4 cut(s)	362, 950, 1796, 2038
Hpy166II	GTNNAC	7 cut(s)	75, 193, 345, 1031, 1266, 1289, 1931
Hpy188I	TCNGA	8 cut(s)	289, 559, 763, 1335, 1510, 1836, 1915, 2036
Hpy188III	TCNNGA	9 cut(s)	76, 304, 314, 356, 421, 583, 659, 1196, 1799
Hpy8I	GTNNAC	7 cut(s)	75, 193, 345, 1031, 1266, 1289, 1931
Hpy99I	CGWCG	2 cut(s)	114, 1919
HpyAV	CCTTC	5 cut(s)	55, 749, 1125, 1619, 2006
HpyCH4III	ACNGT	4 cut(s)	72, 687, 842, 1500
HpyCH4IV	ACGT	5 cut(s)	82, 1043, 1225, 1917, 2030
HpyF10VI	GCNNNNNNNGC	2 cut(s)	136, 854
HpyF3I	CTNAG	5 cut(s)	93, 186, 200, 878, 950
HpySE526I	ACGT	5 cut(s)	82, 1043, 1225, 1917, 2030
Hsp92I	GRCGYC	1 cut(s)	300
Hsp92II	CATG	6 cut(s)	718, 961, 1156, 1576, 1688, 1998
HspAI	GCGC	4 cut(s)	205, 394, 1682, 1705
Kpn2I	TCCGGA	1 cut(s)	582
Kzo9I	GATC	5 cut(s)	352, 408, 562, 1429, 1464
LguI	GCTCTTC	2 cut(s)	864, 1173
LmnI	GCTCC	4 cut(s)	28, 42, 232, 1964
Lsp1109I	GCAGC	5 cut(s)	118, 463, 463, 499, 1443
LweI	GCATC	2 cut(s)	1087, 1784
MaeI	CTAG	8 cut(s)	339, 867, 1172, 1196, 1212, 1689, 1733, 2050
MaeII	ACGT	5 cut(s)	82, 1043, 1225, 1917, 2030
MaeIII	GTNAC	6 cut(s)	334, 801, 953, 1591, 1619, 2026
MalI	GATC	5 cut(s)	354, 410, 564, 1431, 1466
MbiI	CCGCTC	1 cut(s)	235
MboI	GATC	5 cut(s)	352, 408, 562, 1429, 1464
MfeI	CAATTG	1 cut(s)	1257
MflI	RGATCY	1 cut(s)	562
MhlI	GDGCHC	4 cut(s)	146, 1033, 1268, 1933
MlsI	TGGCCA	1 cut(s)	2005
MluNI	TGGCCA	1 cut(s)	2005
MmeI	TCCRAC	4 cut(s)	27, 552, 1938, 1995
Mox20I	TGGCCA	1 cut(s)	2005
MroI	TCCGGA	1 cut(s)	582
MscI	TGGCCA	1 cut(s)	2005
MseI	TTAA	5 cut(s)	603, 852, 1539, 1601, 1605
Msp20I	TGGCCA	1 cut(s)	2005
MspI	CCGG	7 cut(s)	22, 41, 127, 230, 583, 1810, 1962
MspR9I	CCNGG	5 cut(s)	41, 56, 1728, 1810, 1963
MunI	CAATTG	1 cut(s)	1257
MvaI	CCWGG	2 cut(s)	56, 1728
MwoI	GCNNNNNNNGC	2 cut(s)	136, 854
NciI	CCSGG	3 cut(s)	41, 1810, 1963
NdeII	GATC	5 cut(s)	352, 408, 562, 1429, 1464
NlaIII	CATG	6 cut(s)	718, 961, 1156, 1576, 1688, 1998
NmeAIII	GCCGAG	2 cut(s)	165, 1540
NmuCI	GTSAC	4 cut(s)	334, 953, 1619, 2026
NsbI	TGCGCA	1 cut(s)	1683
NspI	RCATGY	3 cut(s)	718, 1576, 1688
PacI	TTAATTAA	1 cut(s)	1605
PaeI	GCATGC	1 cut(s)	1688
PasI	CCCWGGG	1 cut(s)	1727
PciI	ACATGT	1 cut(s)	1572
PciSI	GCTCTTC	2 cut(s)	864, 1173
PfeI	GAWTC	3 cut(s)	310, 1850, 1951
PflMI	CCANNNNNTGG	1 cut(s)	1727
PfoI	TCCNGGA	1 cut(s)	39
PkrI	GCNGC	6 cut(s)	108, 138, 453, 478, 514, 1458
PpuMI	RGGWCCY	1 cut(s)	1746
PscI	ACATGT	1 cut(s)	1572
PshAI	GACNNNNGTC	1 cut(s)	188
PsiI	TTATAA	1 cut(s)	471
Psp5II	RGGWCCY	1 cut(s)	1746
Psp6I	CCWGG	2 cut(s)	54, 1726
PspGI	CCWGG	2 cut(s)	54, 1726
PspPI	GGNCC	5 cut(s)	13, 1234, 1398, 1534, 1746
PspPPI	RGGWCCY	1 cut(s)	1746
PsuI	RGATCY	1 cut(s)	562
RsaI	GTAC	2 cut(s)	20, 948
RsaNI	GTAC	2 cut(s)	19, 947
SalI	GTCGAC	1 cut(s)	191
SapI	GCTCTTC	2 cut(s)	864, 1173
SaqAI	TTAA	5 cut(s)	603, 852, 1539, 1601, 1605
SatI	GCNGC	6 cut(s)	107, 137, 452, 477, 513, 1457
Sau3AI	GATC	5 cut(s)	352, 408, 562, 1429, 1464
Sau96I	GGNCC	5 cut(s)	13, 1234, 1398, 1534, 1746
ScaI	AGTACT	1 cut(s)	948
ScrFI	CCNGG	5 cut(s)	41, 56, 1728, 1810, 1963
SduI	GDGCHC	4 cut(s)	146, 1033, 1268, 1933
SfaNI	GCATC	2 cut(s)	1087, 1784
SfcI	CTRYAG	3 cut(s)	530, 1161, 1404
SinI	GGWCC	2 cut(s)	13, 1746
SmlI	CTYRAG	3 cut(s)	131, 149, 208
SmoI	CTYRAG	3 cut(s)	131, 149, 208
SphI	GCATGC	1 cut(s)	1688
SsiI	CCGC	4 cut(s)	5, 136, 235, 886
SspMI	CTAG	8 cut(s)	339, 867, 1172, 1196, 1212, 1689, 1733, 2050
StyD4I	CCNGG	5 cut(s)	39, 54, 1726, 1808, 1961
TaaI	ACNGT	4 cut(s)	72, 687, 842, 1500
TaiI	ACGT	5 cut(s)	85, 1046, 1228, 1920, 2033
TaqI	TCGA	9 cut(s)	192, 489, 507, 619, 1421, 1442, 1463, 1853, 1980
TatI	WGTACW	1 cut(s)	946
TauI	GCSGC	1 cut(s)	139
TfiI	GAWTC	3 cut(s)	310, 1850, 1951
Tru1I	TTAA	5 cut(s)	603, 852, 1539, 1601, 1605
Tru9I	TTAA	5 cut(s)	603, 852, 1539, 1601, 1605
TscAI	CASTG	6 cut(s)	352, 692, 847, 882, 1273, 1624
TseFI	GTSAC	4 cut(s)	334, 953, 1619, 2026
TseI	GCWGC	5 cut(s)	106, 451, 476, 512, 1456
Tsp45I	GTSAC	4 cut(s)	334, 953, 1619, 2026
TspDTI	ATGAA	7 cut(s)	431, 759, 768, 974, 1287, 1341, 1427
TspRI	CASTG	6 cut(s)	352, 692, 847, 882, 1273, 1624
Van91I	CCANNNNNTGG	1 cut(s)	1727
VneI	GTGCAC	3 cut(s)	1029, 1264, 1929
VpaK11BI	GGWCC	2 cut(s)	13, 1746
XagI	CCTNNNNNAGG	1 cut(s)	59
XapI	RAATTY	8 cut(s)	122, 485, 553, 1007, 1364, 1372, 1541, 1654
XbaI	TCTAGA	1 cut(s)	1195
XceI	RCATGY	3 cut(s)	718, 1576, 1688
XmiI	GTMKAC	1 cut(s)	192
XspI	CTAG	8 cut(s)	339, 867, 1172, 1196, 1212, 1689, 1733, 2050
ZrmI	AGTACT	1 cut(s)	948

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.