U3 small nucleolar RNA-associated protein 6 homolog
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G28200 |
| fragaria_vesca | FvH4_5g29980 FvH4_5g29980 FvH4_5g29980 |
| malus_domestica | MD08G1079900.v1.1 MD15G1066800.v1.1 |
| prunus_persica | Prupe.4G224400_v2.0.a1 |
| pyrus_communis | pycom08g06600 pycom15g06340 |
| rosa_chinensis | RchiOBHm_Chr7g0223851 RchiOBHm_Chr7g0223951 |
| rosa_laevigata | RLG00000001926 |
| rosa_multiflora | Rmu_sc0002469.1_g000009 Rmu_sc0004540.1_g000012 Rmu_sc0004540.1_g000016 |
| rosa_roxburghii | Rroxscaffold_3G00235230 |
| rosa_rugosa | Rorug07G0220900 |
| rosa_samantha | Rh7AG363500 Rh7AG364100 Rh7BG354600 Rh7BG355500 Rh7CG382100 Rh7CG382900 Rh7DG358100 Rh7DG358600 |
| rosa_wichuraiana | Rw7G030850 Rw7G030880 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 298 |
| AgsI | TTSAA | 2 cut(s) | 212, 427 |
| AjnI | CCWGG | 1 cut(s) | 306 |
| AloI | GAACNNNNNNTCC | 1 cut(s) | 29 |
| Alw26I | GTCTC | 1 cut(s) | 389 |
| AlwI | GGATC | 1 cut(s) | 298 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 264 |
| AsuHPI | GGTGA | 1 cut(s) | 469 |
| BaeGI | GKGCMC | 1 cut(s) | 65 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 249, 281 |
| BciT130I | CCWGG | 1 cut(s) | 308 |
| BclI | TGATCA | 1 cut(s) | 76 |
| BcoDI | GTCTC | 1 cut(s) | 389 |
| BfaI | CTAG | 1 cut(s) | 273 |
| Bme1390I | CCNGG | 1 cut(s) | 308 |
| BmrFI | CCNGG | 1 cut(s) | 308 |
| BpmI | CTGGAG | 1 cut(s) | 270 |
| BpuEI | CTTGAG | 1 cut(s) | 364 |
| BsaAI | YACGTR | 1 cut(s) | 344 |
| BseBI | CCWGG | 1 cut(s) | 308 |
| BseGI | GGATG | 1 cut(s) | 61 |
| BseMII | CTCAG | 1 cut(s) | 275 |
| BseSI | GKGCMC | 1 cut(s) | 65 |
| BslFI | GGGAC | 1 cut(s) | 118 |
| BsmAI | GTCTC | 1 cut(s) | 389 |
| BsmFI | GGGAC | 1 cut(s) | 118 |
| Bsp1286I | GDGCHC | 1 cut(s) | 65 |
| Bsp143I | GATC | 2 cut(s) | 76, 303 |
| BspCNI | CTCAG | 1 cut(s) | 276 |
| BspPI | GGATC | 1 cut(s) | 298 |
| BssMI | GATC | 2 cut(s) | 76, 303 |
| Bst2UI | CCWGG | 1 cut(s) | 308 |
| Bst4CI | ACNGT | 1 cut(s) | 102 |
| Bst6I | CTCTTC | 2 cut(s) | 270, 362 |
| BstBAI | YACGTR | 1 cut(s) | 344 |
| BstC8I | GCNNGC | 1 cut(s) | 416 |
| BstDEI | CTNAG | 4 cut(s) | 233, 284, 356, 476 |
| BstF5I | GGATG | 1 cut(s) | 61 |
| BstKTI | GATC | 2 cut(s) | 79, 306 |
| BstMAI | GTCTC | 1 cut(s) | 389 |
| BstMBI | GATC | 2 cut(s) | 76, 303 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 245 |
| BstNI | CCWGG | 1 cut(s) | 308 |
| BstSCI | CCNGG | 1 cut(s) | 306 |
| BstSLI | GKGCMC | 1 cut(s) | 65 |
| BstSNI | TACGTA | 1 cut(s) | 344 |
| BstX2I | RGATCY | 1 cut(s) | 303 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 404 |
| BstYI | RGATCY | 1 cut(s) | 303 |
| BtsCI | GGATG | 1 cut(s) | 61 |
| BtsIMutI | CAGTG | 1 cut(s) | 107 |
| Cac8I | GCNNGC | 1 cut(s) | 416 |
| CviAII | CATG | 1 cut(s) | 130 |
| CviJI | RGCY | 4 cut(s) | 32, 239, 374, 414 |
| CviKI_1 | RGCY | 4 cut(s) | 32, 239, 374, 414 |
| DdeI | CTNAG | 4 cut(s) | 233, 284, 356, 476 |
| DpnI | GATC | 2 cut(s) | 78, 305 |
| DpnII | GATC | 2 cut(s) | 76, 303 |
| Eam1104I | CTCTTC | 2 cut(s) | 270, 362 |
| EarI | CTCTTC | 2 cut(s) | 270, 362 |
| Eco105I | TACGTA | 1 cut(s) | 344 |
| EcoRII | CCWGG | 1 cut(s) | 306 |
| FaeI | CATG | 1 cut(s) | 133 |
| FaiI | YATR | 9 cut(s) | 131, 230, 242, 244, 246, 334, 336, 365, 431 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 359, 391 |
| FaqI | GGGAC | 1 cut(s) | 118 |
| FatI | CATG | 1 cut(s) | 129 |
| FauNDI | CATATG | 1 cut(s) | 334 |
| FbaI | TGATCA | 1 cut(s) | 76 |
| FokI | GGATG | 1 cut(s) | 68 |
| FspBI | CTAG | 1 cut(s) | 273 |
| GsuI | CTGGAG | 1 cut(s) | 270 |
| Hin1II | CATG | 1 cut(s) | 133 |
| HinfI | GANTC | 1 cut(s) | 260 |
| HphI | GGTGA | 1 cut(s) | 469 |
| Hpy188I | TCNGA | 5 cut(s) | 36, 81, 169, 285, 479 |
| Hpy188III | TCNNGA | 1 cut(s) | 212 |
| HpyAV | CCTTC | 3 cut(s) | 31, 140, 385 |
| HpyCH4III | ACNGT | 1 cut(s) | 102 |
| HpyCH4IV | ACGT | 1 cut(s) | 343 |
| HpyCH4V | TGCA | 3 cut(s) | 338, 418, 439 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 245 |
| HpyF3I | CTNAG | 4 cut(s) | 233, 284, 356, 476 |
| HpySE526I | ACGT | 1 cut(s) | 343 |
| Hsp92II | CATG | 1 cut(s) | 133 |
| Ksp22I | TGATCA | 1 cut(s) | 76 |
| Kzo9I | GATC | 2 cut(s) | 76, 303 |
| LmnI | GCTCC | 1 cut(s) | 251 |
| LpnPI | CCDG | 5 cut(s) | 234, 293, 320, 410, 449 |
| MaeI | CTAG | 1 cut(s) | 273 |
| MaeII | ACGT | 1 cut(s) | 343 |
| MaeIII | GTNAC | 1 cut(s) | 465 |
| MalI | GATC | 2 cut(s) | 78, 305 |
| MboI | GATC | 2 cut(s) | 76, 303 |
| MboII | GAAGA | 4 cut(s) | 257, 379, 460, 472 |
| MflI | RGATCY | 1 cut(s) | 303 |
| MhlI | GDGCHC | 1 cut(s) | 65 |
| MluCI | AATT | 3 cut(s) | 23, 198, 328 |
| MnlI | CCTC | 4 cut(s) | 26, 46, 52, 280 |
| MroXI | GAANNNNTTC | 1 cut(s) | 264 |
| MseI | TTAA | 3 cut(s) | 26, 138, 327 |
| MspR9I | CCNGG | 1 cut(s) | 308 |
| MvaI | CCWGG | 1 cut(s) | 308 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 245 |
| NdeI | CATATG | 1 cut(s) | 334 |
| NdeII | GATC | 2 cut(s) | 76, 303 |
| NlaIII | CATG | 1 cut(s) | 133 |
| NmuCI | GTSAC | 1 cut(s) | 465 |
| PdmI | GAANNNNTTC | 1 cut(s) | 264 |
| PfeI | GAWTC | 1 cut(s) | 260 |
| PfoI | TCCNGGA | 1 cut(s) | 306 |
| Ppu21I | YACGTR | 1 cut(s) | 344 |
| Psp6I | CCWGG | 1 cut(s) | 306 |
| PspGI | CCWGG | 1 cut(s) | 306 |
| PsuI | RGATCY | 1 cut(s) | 303 |
| SaqAI | TTAA | 3 cut(s) | 26, 138, 327 |
| Sau3AI | GATC | 2 cut(s) | 76, 303 |
| ScrFI | CCNGG | 1 cut(s) | 308 |
| SduI | GDGCHC | 1 cut(s) | 65 |
| SetI | ASST | 5 cut(s) | 42, 167, 223, 295, 346 |
| SmlI | CTYRAG | 1 cut(s) | 379 |
| SmoI | CTYRAG | 1 cut(s) | 379 |
| SnaBI | TACGTA | 1 cut(s) | 344 |
| Sse9I | AATT | 3 cut(s) | 23, 198, 328 |
| SspMI | CTAG | 1 cut(s) | 273 |
| StyD4I | CCNGG | 1 cut(s) | 306 |
| TaaI | ACNGT | 1 cut(s) | 102 |
| TaiI | ACGT | 1 cut(s) | 346 |
| TasI | AATT | 3 cut(s) | 23, 198, 328 |
| TfiI | GAWTC | 1 cut(s) | 260 |
| Tru1I | TTAA | 3 cut(s) | 26, 138, 327 |
| Tru9I | TTAA | 3 cut(s) | 26, 138, 327 |
| TscAI | CASTG | 1 cut(s) | 107 |
| TseFI | GTSAC | 1 cut(s) | 465 |
| Tsp45I | GTSAC | 1 cut(s) | 465 |
| TspDTI | ATGAA | 5 cut(s) | 174, 189, 195, 321, 380 |
| TspRI | CASTG | 1 cut(s) | 107 |
| XmnI | GAANNNNTTC | 1 cut(s) | 264 |
| XspI | CTAG | 1 cut(s) | 273 |