Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0006144

Physical Location & Seq

Genomic Coordinates Forward (+)

3867324 .. 3870280

Gene Structure 2957 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom15g06340.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1983 bp

ATGGCGGATGTGGTCCAGTACCGGATGGAGCGTATGCTCCCGGAGTTGGACGACCTGGAGAAGGAGGAACTATTCACGAGACGTGAGCTTGCTGAGATTGTCAAGCAGCGTCGCAATTTTGAATTCCGGCTCAAGCGGCCGAGCCCACTCAAGGAGGACTACCTTGCCTACATTGACTACGAGACTAAGGTCGACAAGCTGAGGCACTTGAGGAAAAAGGCAAAGTTGCCTGAGCGGGAAGATAATGAGGAGACGAAGATGAAGCAAAAGAGGAAGAGGAAGTCAGTTTCGGACTTTGCTGGTGTCAGGAGGATTCTTGATATTTATAGGCTTGCCGTCACCAGGTTCACTGGCGATCTTGAACTCTGGTTTCGCTACCTAGACTTTTGTAAAGAGCGACGAAATGGTAGGATCAAGGAGGTCTTGAATAAGGTAATCGGGTTTCATTCCAAGCAGCCATCTGTTTGGATATATAAAGCTGCTTGGGAATTCGACAACTACTCAAATGTCGAAGCTGCCCGTAATACAATGCTACAGGGGTTGAGATTTTGCAAAAATTTAGAAGATCTTTGGATAGAGTATCTCCGGATGGAACTCACATTCCTGAATAAACTAAAGGCTCGGAAGGTTGCTCTTGGAGAGGATGAGGGTAGTCTGGTTCGTGATAAGATTAGTGCTGATGAGCAACAATGGAAAAGTGAAAACAAAGATTTATACATGCCTCTCAATGAAGAAAGAGAAAATGATGATAATAATGAAGGGTCAGATATCCAAGAAAGCAAGTCAACGAAGAAAGTTGATAAGTTAGAAGAGGTAGGTTTTGGCGTGATAAAAACCATATACAGTGAAGCAGTTAAAGCTCTTCCCTCTAGCTTTACCCTGAGAAAGCGGTTTTTGGAGATCTTGGAACCTATCAACTTGGCTAAGTCTGGGGAAATGCGTGAGGAAGTACTAAGTGACATGAAGAGAGACTTCTCAACAGAACCAGAGTATTGGGATTGGCTTGCTAAATTCGAATACAGTCCTGCAAATACACAGGAGGAGATGAGTGAAGAAATCACATTTTCTCGTATTGGAAAAGCCATTCAGGTCTATGAGGATGCCATAAAAGTTTTGCCTTCAGCCATAATGTTCAAGCACTATGCAAAGTTTCTGATGGGTACTGTAGCTCTTCTAATAGGAGACAACAAGCCTTCTCTAGACAGTCAATCTGCTAGTTATATTTCACGTCTTTTGGGCCTTTACCAAAAGGCTGATACAATCGGGTGCACTAATGAGGAACTTGCCTGTGAGCATATCTCATTTTATTTGCAACTTGGAAGAGTGGATGAGGCTCGGAAACTGGCACAAAATCTTTGTTGCGGAAAATTTCCAAATTCGGCAAAGGTACGGGTATTATGGGCCTCGATTGAAATGAAGCACTTCACAAGGGATCTTATTTCTCCGAGCAAAGATAAGCTGATATCGATCTTTGAACTTGTAAAAGATGGTTTGACAAGACTGTCCATTTCAGAAGCTGAGAGCTTGTGGGTAATGGCCCTTAAATTCTTTGCCATTCAAAAACATTATTTTGACATGTTGGTTGAGGTTGCTGTTACATCGTTAATTGAATATCGTGGCAGTGACGAAGGATTTTCCCTCTCTTCTGTTATTGTTAATTTTGTTCTTCAAAAAGATGGAATTGCACATGCTAGAGAGATGTATAAGCGCTTTACAGGCTTACCACGCCCTGGGCTAGTTCTATATAGGACCTGCATTGAATTGGAAACAAACCTTGCATCAAATGGTGATAAAACTGGTCTTGAAAATGCCCGGAAGTTGTATTTTTCTGCATTACAGACTTACGACCAAGATTCAAGCTTGTGGCGAGATTTCTGGCTTATGGAGACCAAGATGGGAACATCAAAGACAGCTTCTGATGTATCTTGGCGTGCGCGCAAGACTCTAAAAGACAGTAGTGCACTTTCGTTGCCAGATTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000462 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016070 GO:0016072 GO:0022613 GO:0030490 GO:0030515 GO:0030684 GO:0030686 GO:0031974 GO:0031981 GO:0032040 GO:0032991 GO:0034388 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0042274 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0046483 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

U3_assoc_6

Protein Analysis

661

Amino Acids

76.84

Weight (kDa)

7.52

Isoelectric Point (pI)

46.74

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006144)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G28200
fragaria_vesca	FvH4_5g29980 FvH4_5g29980 FvH4_5g29980
malus_domestica	MD08G1079900.v1.1 MD15G1066800.v1.1
prunus_persica	Prupe.4G224400_v2.0.a1
pyrus_communis	pycom08g06600 pycom15g06340
rosa_chinensis	RchiOBHm_Chr7g0223851 RchiOBHm_Chr7g0223951
rosa_laevigata	RLG00000001926
rosa_multiflora	Rmu_sc0002469.1_g000009 Rmu_sc0004540.1_g000012 Rmu_sc0004540.1_g000016
rosa_roxburghii	Rroxscaffold_3G00235230
rosa_rugosa	Rorug07G0220900
rosa_samantha	Rh7AG363500 Rh7AG364100 Rh7BG354600 Rh7BG355500 Rh7CG382100 Rh7CG382900 Rh7DG358100 Rh7DG358600
rosa_wichuraiana	Rw7G030850 Rw7G030880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1501
Acc36I	ACCTGC	1 cut(s)	1760
AccB7I	CCANNNNNTGG	1 cut(s)	1730
AccBSI	CCGCTC	1 cut(s)	235
AccI	GTMKAC	1 cut(s)	192
AccII	CGCG	1 cut(s)	1936
AccIII	TCCGGA	1 cut(s)	585
AciI	CCGC	5 cut(s)	5, 136, 235, 889, 1362
AclWI	GGATC	2 cut(s)	419, 1440
AcoI	YGGCCR	1 cut(s)	137
AcsI	RAATTY	7 cut(s)	122, 488, 556, 1010, 1367, 1375, 1544
AcuI	CTGAAG	1 cut(s)	1104
AfaI	GTAC	4 cut(s)	20, 951, 1162, 1389
AfeI	AGCGCT	1 cut(s)	1709
AfiI	CCNNNNNNNGG	5 cut(s)	46, 61, 151, 342, 1730
AflIII	ACRYGT	1 cut(s)	1575
AjiI	CACGTC	2 cut(s)	83, 1229
AjnI	CCWGG	3 cut(s)	54, 341, 1729
AloI	GAACNNNNNNTCC	2 cut(s)	585, 617
Alw21I	GWGCWC	2 cut(s)	1271, 1963
Alw26I	GTCTC	6 cut(s)	73, 176, 245, 963, 1176, 1880
Alw44I	GTGCAC	2 cut(s)	1267, 1959
AlwI	GGATC	2 cut(s)	419, 1440
AlwNI	CAGNNNCTG	2 cut(s)	1517, 1916
Aor13HI	TCCGGA	1 cut(s)	585
Aor51HI	AGCGCT	1 cut(s)	1709
AoxI	GGCC	4 cut(s)	137, 1237, 1401, 1536
ApaLI	GTGCAC	2 cut(s)	1267, 1959
ApeKI	GCWGC	4 cut(s)	106, 454, 479, 515
ApoI	RAATTY	7 cut(s)	122, 488, 556, 1010, 1367, 1375, 1544
Asp700I	GAANNNNTTC	1 cut(s)	1421
AspLEI	GCGC	3 cut(s)	1710, 1936, 1938
AspS9I	GGNCC	5 cut(s)	13, 1237, 1401, 1537, 1749
AsuC2I	CCSGG	2 cut(s)	41, 1813
AsuHPI	GGTGA	2 cut(s)	331, 1799
AsuII	TTCGAA	1 cut(s)	1014
AvaII	GGWCC	2 cut(s)	13, 1749
BaeGI	GKGCMC	2 cut(s)	1271, 1963
BanII	GRGCYC	1 cut(s)	146
BauI	CACGAG	1 cut(s)	76
Bbv12I	GWGCWC	2 cut(s)	1271, 1963
BbvCI	CCTCAGC	1 cut(s)	200
BbvI	GCAGC	4 cut(s)	118, 466, 466, 502
BccI	CCATC	7 cut(s)	19, 466, 583, 1150, 1481, 1670, 1888
BceAI	ACGGC	1 cut(s)	320
BciT130I	CCWGG	3 cut(s)	56, 343, 1731
BcnI	CCSGG	2 cut(s)	41, 1813
BcoDI	GTCTC	6 cut(s)	73, 176, 245, 963, 1176, 1880
BfaI	CTAG	6 cut(s)	380, 870, 1199, 1215, 1692, 1736
BfmI	CTRYAG	2 cut(s)	533, 1164
BfoI	RGCGCY	1 cut(s)	1711
BfuAI	ACCTGC	1 cut(s)	1760
BglII	AGATCT	2 cut(s)	565, 900
BisI	GCNGC	5 cut(s)	107, 137, 455, 480, 516
BlsI	GCNGC	5 cut(s)	108, 138, 456, 481, 517
BmcAI	AGTACT	1 cut(s)	951
Bme1390I	CCNGG	5 cut(s)	41, 56, 343, 1731, 1813
Bme18I	GGWCC	2 cut(s)	13, 1749
BmgBI	CACGTC	2 cut(s)	83, 1229
BmgT120I	GGNCC	5 cut(s)	13, 1237, 1401, 1537, 1749
BmiI	GGNNCC	1 cut(s)	909
BmrFI	CCNGG	5 cut(s)	41, 56, 343, 1731, 1813
BmsI	GCATC	2 cut(s)	1090, 1787
BoxI	GACNNNNGTC	1 cut(s)	188
BplI	GAGNNNNNCTC	2 cut(s)	1283, 1315
BpmI	CTGGAG	1 cut(s)	77
Bpu10I	CCTNAGC	2 cut(s)	200, 231
Bpu14I	TTCGAA	1 cut(s)	1014
BpuEI	CTTGAG	3 cut(s)	116, 134, 229
BpuMI	CCSGG	2 cut(s)	41, 1813
Bsa29I	ATCGAT	1 cut(s)	1466
BsaBI	GATNNNNATC	1 cut(s)	1466
BsaI	GGTCTC	1 cut(s)	1880
BsaJI	CCNNGG	2 cut(s)	1729, 1730
BsaWI	WCCGGW	2 cut(s)	21, 585
Bsc4I	CCNNNNNNNGG	5 cut(s)	46, 61, 151, 342, 1730
Bse1I	ACTGG	4 cut(s)	16, 355, 1347, 1801
Bse8I	GATNNNNATC	1 cut(s)	1466
BseAI	TCCGGA	1 cut(s)	585
BseBI	CCWGG	3 cut(s)	56, 343, 1731
BseCI	ATCGAT	1 cut(s)	1466
BseDI	CCNNGG	2 cut(s)	1729, 1730
BseGI	GGATG	6 cut(s)	13, 30, 594, 649, 1105, 1333
BseJI	GATNNNNATC	1 cut(s)	1466
BseLI	CCNNNNNNNGG	5 cut(s)	46, 61, 151, 342, 1730
BseMII	CTCAG	5 cut(s)	84, 191, 222, 872, 1509
BseNI	ACTGG	4 cut(s)	16, 355, 1347, 1801
BsePI	GCGCGC	1 cut(s)	1934
BseRI	GAGGAG	2 cut(s)	263, 1055
BseSI	GKGCMC	2 cut(s)	1271, 1963
BseX3I	CGGCCG	1 cut(s)	137
BseXI	GCAGC	4 cut(s)	118, 466, 466, 502
Bsh1236I	CGCG	1 cut(s)	1936
Bsh1285I	CGRYCG	1 cut(s)	140
BshFI	GGCC	4 cut(s)	139, 1239, 1403, 1538
BshVI	ATCGAT	1 cut(s)	1466
BsiEI	CGRYCG	1 cut(s)	140
BsiHKAI	GWGCWC	2 cut(s)	1271, 1963
BsiSI	CCGG	5 cut(s)	22, 41, 127, 586, 1813
BslI	CCNNNNNNNGG	5 cut(s)	46, 61, 151, 342, 1730
BsmAI	GTCTC	6 cut(s)	73, 176, 245, 963, 1176, 1880
BsmBI	CGTCTC	2 cut(s)	73, 245
BsnI	GGCC	4 cut(s)	139, 1239, 1403, 1538
Bso31I	GGTCTC	1 cut(s)	1880
Bsp119I	TTCGAA	1 cut(s)	1014
Bsp1286I	GDGCHC	3 cut(s)	146, 1271, 1963
Bsp13I	TCCGGA	1 cut(s)	585
Bsp143I	GATC	6 cut(s)	355, 411, 565, 900, 1432, 1467
BspACI	CCGC	5 cut(s)	5, 136, 235, 889, 1362
BspANI	GGCC	4 cut(s)	139, 1239, 1403, 1538
BspCNI	CTCAG	5 cut(s)	85, 192, 223, 873, 1510
BspDI	ATCGAT	1 cut(s)	1466
BspEI	TCCGGA	1 cut(s)	585
BspFNI	CGCG	1 cut(s)	1936
BspLI	GGNNCC	1 cut(s)	909
BspMI	ACCTGC	1 cut(s)	1760
BspPI	GGATC	2 cut(s)	419, 1440
BspQI	GCTCTTC	2 cut(s)	867, 1176
BspT104I	TTCGAA	1 cut(s)	1014
BspTNI	GGTCTC	1 cut(s)	1880
BsrBI	CCGCTC	1 cut(s)	235
BsrI	ACTGG	4 cut(s)	16, 355, 1347, 1801
BssECI	CCNNGG	2 cut(s)	1729, 1730
BssHII	GCGCGC	1 cut(s)	1934
BssMI	GATC	6 cut(s)	355, 411, 565, 900, 1432, 1467
BssSI	CACGAG	1 cut(s)	76
Bst2BI	CACGAG	1 cut(s)	76
Bst2UI	CCWGG	3 cut(s)	56, 343, 1731
Bst4CI	ACNGT	6 cut(s)	845, 1022, 1165, 1205, 1503, 1955
Bst6I	CTCTTC	7 cut(s)	269, 804, 867, 959, 1176, 1315, 1648
BstBI	TTCGAA	1 cut(s)	1014
BstC8I	GCNNGC	5 cut(s)	90, 333, 1005, 1932, 1936
BstDEI	CTNAG	8 cut(s)	93, 186, 200, 231, 881, 924, 953, 1518
BstENI	CCTNNNNNAGG	1 cut(s)	59
BstF5I	GGATG	6 cut(s)	13, 30, 594, 649, 1105, 1333
BstFNI	CGCG	1 cut(s)	1936
BstH2I	RGCGCY	1 cut(s)	1711
BstHHI	GCGC	3 cut(s)	1710, 1936, 1938
BstKTI	GATC	6 cut(s)	358, 414, 568, 903, 1435, 1470
BstMAI	GTCTC	6 cut(s)	73, 176, 245, 963, 1176, 1880
BstMBI	GATC	6 cut(s)	355, 411, 565, 900, 1432, 1467
BstMCI	CGRYCG	1 cut(s)	140
BstMWI	GCNNNNNNNGC	4 cut(s)	136, 857, 1716, 1725
BstNI	CCWGG	3 cut(s)	56, 343, 1731
BstNSI	RCATGY	3 cut(s)	721, 1579, 1691
BstPAI	GACNNNNGTC	1 cut(s)	188
BstSCI	CCNGG	5 cut(s)	39, 54, 341, 1729, 1811
BstSFI	CTRYAG	2 cut(s)	533, 1164
BstSLI	GKGCMC	2 cut(s)	1271, 1963
BstUI	CGCG	1 cut(s)	1936
BstV1I	GCAGC	4 cut(s)	118, 466, 466, 502
BstX2I	RGATCY	3 cut(s)	565, 900, 1432
BstXI	CCANNNNNNTGG	2 cut(s)	465, 993
BstYI	RGATCY	3 cut(s)	565, 900, 1432
BstZI	CGGCCG	1 cut(s)	137
Bsu15I	ATCGAT	1 cut(s)	1466
BsuRI	GGCC	4 cut(s)	139, 1239, 1403, 1538
BsuTUI	ATCGAT	1 cut(s)	1466
BtrI	CACGTC	2 cut(s)	83, 1229
BtsCI	GGATG	6 cut(s)	13, 30, 594, 649, 1105, 1333
BtsI	GCAGTG	1 cut(s)	1627
BtsIMutI	CAGTG	3 cut(s)	348, 850, 1627
BveI	ACCTGC	1 cut(s)	1760
Cac8I	GCNNGC	5 cut(s)	90, 333, 1005, 1932, 1936
CaiI	CAGNNNCTG	2 cut(s)	1517, 1916
CfoI	GCGC	3 cut(s)	1710, 1936, 1938
Cfr13I	GGNCC	5 cut(s)	13, 1237, 1401, 1537, 1749
ClaI	ATCGAT	1 cut(s)	1466
CseI	GACGC	1 cut(s)	98
CsiI	ACCWGGT	1 cut(s)	341
Csp6I	GTAC	4 cut(s)	19, 950, 1161, 1388
CviAII	CATG	4 cut(s)	718, 961, 1576, 1688
CviQI	GTAC	4 cut(s)	19, 950, 1161, 1388
DdeI	CTNAG	8 cut(s)	93, 186, 200, 231, 881, 924, 953, 1518
DpnI	GATC	6 cut(s)	357, 413, 567, 902, 1434, 1469
DpnII	GATC	6 cut(s)	355, 411, 565, 900, 1432, 1467
DrdI	GACNNNNNNGTC	1 cut(s)	1501
DseDI	GACNNNNNNGTC	1 cut(s)	1501
EaeI	YGGCCR	1 cut(s)	137
EagI	CGGCCG	1 cut(s)	137
Eam1104I	CTCTTC	7 cut(s)	269, 804, 867, 959, 1176, 1315, 1648
EarI	CTCTTC	7 cut(s)	269, 804, 867, 959, 1176, 1315, 1648
EciI	GGCGGA	1 cut(s)	20
EclXI	CGGCCG	1 cut(s)	137
Eco24I	GRGCYC	1 cut(s)	146
Eco31I	GGTCTC	1 cut(s)	1880
Eco32I	GATATC	2 cut(s)	769, 1464
Eco47I	GGWCC	2 cut(s)	13, 1749
Eco47III	AGCGCT	1 cut(s)	1709
Eco52I	CGGCCG	1 cut(s)	137
Eco57I	CTGAAG	1 cut(s)	1104
EcoNI	CCTNNNNNAGG	1 cut(s)	59
EcoO109I	RGGNCCY	1 cut(s)	1749
EcoRI	GAATTC	2 cut(s)	122, 488
EcoRII	CCWGG	3 cut(s)	54, 341, 1729
EcoRV	GATATC	2 cut(s)	769, 1464
EcoT38I	GRGCYC	1 cut(s)	146
Esp3I	CGTCTC	2 cut(s)	73, 245
FaeI	CATG	4 cut(s)	721, 964, 1579, 1691
FalI	AAGNNNNNCTT	4 cut(s)	407, 439, 956, 988
FatI	CATG	4 cut(s)	717, 960, 1575, 1687
FauI	CCCGC	1 cut(s)	228
FblI	GTMKAC	1 cut(s)	192
Fnu4HI	GCNGC	5 cut(s)	107, 137, 455, 480, 516
FokI	GGATG	6 cut(s)	20, 37, 601, 656, 1112, 1340
FriOI	GRGCYC	1 cut(s)	146
Fsp4HI	GCNGC	5 cut(s)	107, 137, 455, 480, 516
FspBI	CTAG	6 cut(s)	380, 870, 1199, 1215, 1692, 1736
GlaI	GCGC	3 cut(s)	1709, 1935, 1937
GluI	GCNGC	5 cut(s)	107, 137, 455, 480, 516
GsuI	CTGGAG	1 cut(s)	77
HaeII	RGCGCY	1 cut(s)	1711
HaeIII	GGCC	4 cut(s)	139, 1239, 1403, 1538
HapII	CCGG	5 cut(s)	22, 41, 127, 586, 1813
HgaI	GACGC	1 cut(s)	98
HhaI	GCGC	3 cut(s)	1710, 1936, 1938
Hin1II	CATG	4 cut(s)	721, 964, 1579, 1691
Hin6I	GCGC	3 cut(s)	1708, 1934, 1936
HinP1I	GCGC	3 cut(s)	1708, 1934, 1936
HincII	GTYRAC	2 cut(s)	193, 786
HindII	GTYRAC	2 cut(s)	193, 786
HindIII	AAGCTT	1 cut(s)	1858
HinfI	GANTC	3 cut(s)	313, 1853, 1942
HpaII	CCGG	5 cut(s)	22, 41, 127, 586, 1813
HphI	GGTGA	2 cut(s)	331, 1799
Hpy166II	GTNNAC	5 cut(s)	193, 348, 786, 1269, 1961
Hpy188I	TCNGA	8 cut(s)	292, 624, 766, 1155, 1338, 1446, 1513, 1918
Hpy8I	GTNNAC	5 cut(s)	193, 348, 786, 1269, 1961
Hpy99I	CGWCG	2 cut(s)	114, 402
HpyAV	CCTTC	6 cut(s)	55, 619, 752, 1128, 1203, 1622
HpyCH4III	ACNGT	6 cut(s)	845, 1022, 1165, 1205, 1503, 1955
HpyCH4IV	ACGT	2 cut(s)	82, 1228
HpyF10VI	GCNNNNNNNGC	4 cut(s)	136, 857, 1716, 1725
HpyF3I	CTNAG	8 cut(s)	93, 186, 200, 231, 881, 924, 953, 1518
HpySE526I	ACGT	2 cut(s)	82, 1228
Hsp92II	CATG	4 cut(s)	721, 964, 1579, 1691
HspAI	GCGC	3 cut(s)	1708, 1934, 1936
Kpn2I	TCCGGA	1 cut(s)	585
Kzo9I	GATC	6 cut(s)	355, 411, 565, 900, 1432, 1467
LguI	GCTCTTC	2 cut(s)	867, 1176
LmnI	GCTCC	2 cut(s)	28, 42
Lsp1109I	GCAGC	4 cut(s)	118, 466, 466, 502
LweI	GCATC	2 cut(s)	1090, 1787
MabI	ACCWGGT	1 cut(s)	341
MaeI	CTAG	6 cut(s)	380, 870, 1199, 1215, 1692, 1736
MaeII	ACGT	2 cut(s)	82, 1228
MaeIII	GTNAC	4 cut(s)	337, 956, 1594, 1622
MalI	GATC	6 cut(s)	357, 413, 567, 902, 1434, 1469
MbiI	CCGCTC	1 cut(s)	235
MboI	GATC	6 cut(s)	355, 411, 565, 900, 1432, 1467
MflI	RGATCY	3 cut(s)	565, 900, 1432
MhlI	GDGCHC	3 cut(s)	146, 1271, 1963
MlyI	GAGTC	1 cut(s)	1936
MmeI	TCCRAC	1 cut(s)	27
MroI	TCCGGA	1 cut(s)	585
MroXI	GAANNNNTTC	1 cut(s)	1421
MseI	TTAA	4 cut(s)	855, 1542, 1604, 1656
MspI	CCGG	5 cut(s)	22, 41, 127, 586, 1813
MspR9I	CCNGG	5 cut(s)	41, 56, 343, 1731, 1813
MvaI	CCWGG	3 cut(s)	56, 343, 1731
MvnI	CGCG	1 cut(s)	1936
MwoI	GCNNNNNNNGC	4 cut(s)	136, 857, 1716, 1725
NciI	CCSGG	2 cut(s)	41, 1813
NdeII	GATC	6 cut(s)	355, 411, 565, 900, 1432, 1467
NlaIII	CATG	4 cut(s)	721, 964, 1579, 1691
NlaIV	GGNNCC	1 cut(s)	909
NmeAIII	GCCGAG	1 cut(s)	165
NmuCI	GTSAC	3 cut(s)	337, 956, 1622
NspI	RCATGY	3 cut(s)	721, 1579, 1691
NspV	TTCGAA	1 cut(s)	1014
PasI	CCCWGGG	1 cut(s)	1730
PauI	GCGCGC	1 cut(s)	1934
PciI	ACATGT	1 cut(s)	1575
PciSI	GCTCTTC	2 cut(s)	867, 1176
PdmI	GAANNNNTTC	1 cut(s)	1421
PfeI	GAWTC	2 cut(s)	313, 1853
PflMI	CCANNNNNTGG	1 cut(s)	1730
PfoI	TCCNGGA	1 cut(s)	39
PkrI	GCNGC	5 cut(s)	108, 138, 456, 481, 517
PleI	GAGTC	1 cut(s)	1936
PpsI	GAGTC	1 cut(s)	1936
PpuMI	RGGWCCY	1 cut(s)	1749
PscI	ACATGT	1 cut(s)	1575
PshAI	GACNNNNGTC	1 cut(s)	188
Psp5II	RGGWCCY	1 cut(s)	1749
Psp6I	CCWGG	3 cut(s)	54, 341, 1729
PspGI	CCWGG	3 cut(s)	54, 341, 1729
PspN4I	GGNNCC	1 cut(s)	909
PspPI	GGNCC	5 cut(s)	13, 1237, 1401, 1537, 1749
PspPPI	RGGWCCY	1 cut(s)	1749
PstNI	CAGNNNCTG	2 cut(s)	1517, 1916
PsuI	RGATCY	3 cut(s)	565, 900, 1432
PteI	GCGCGC	1 cut(s)	1934
RsaI	GTAC	4 cut(s)	20, 951, 1162, 1389
RsaNI	GTAC	4 cut(s)	19, 950, 1161, 1388
SalI	GTCGAC	1 cut(s)	191
SapI	GCTCTTC	2 cut(s)	867, 1176
SaqAI	TTAA	4 cut(s)	855, 1542, 1604, 1656
SatI	GCNGC	5 cut(s)	107, 137, 455, 480, 516
Sau3AI	GATC	6 cut(s)	355, 411, 565, 900, 1432, 1467
Sau96I	GGNCC	5 cut(s)	13, 1237, 1401, 1537, 1749
ScaI	AGTACT	1 cut(s)	951
SchI	GAGTC	1 cut(s)	1936
ScrFI	CCNGG	5 cut(s)	41, 56, 343, 1731, 1813
SduI	GDGCHC	3 cut(s)	146, 1271, 1963
SexAI	ACCWGGT	1 cut(s)	341
SfaNI	GCATC	2 cut(s)	1090, 1787
SfcI	CTRYAG	2 cut(s)	533, 1164
SfuI	TTCGAA	1 cut(s)	1014
SinI	GGWCC	2 cut(s)	13, 1749
SmlI	CTYRAG	3 cut(s)	131, 149, 208
SmoI	CTYRAG	3 cut(s)	131, 149, 208
SsiI	CCGC	5 cut(s)	5, 136, 235, 889, 1362
SspMI	CTAG	6 cut(s)	380, 870, 1199, 1215, 1692, 1736
StyD4I	CCNGG	5 cut(s)	39, 54, 341, 1729, 1811
TaaI	ACNGT	6 cut(s)	845, 1022, 1165, 1205, 1503, 1955
TaiI	ACGT	2 cut(s)	85, 1231
TaqI	TCGA	6 cut(s)	192, 492, 510, 1014, 1406, 1466
TatI	WGTACW	1 cut(s)	949
TauI	GCSGC	1 cut(s)	139
TfiI	GAWTC	2 cut(s)	313, 1853
Tru1I	TTAA	4 cut(s)	855, 1542, 1604, 1656
Tru9I	TTAA	4 cut(s)	855, 1542, 1604, 1656
TscAI	CASTG	3 cut(s)	355, 850, 1627
TseFI	GTSAC	3 cut(s)	337, 956, 1622
TseI	GCWGC	4 cut(s)	106, 454, 479, 515
Tsp45I	GTSAC	3 cut(s)	337, 956, 1622
TspDTI	ATGAA	6 cut(s)	275, 434, 744, 771, 977, 1430
TspRI	CASTG	3 cut(s)	355, 850, 1627
Van91I	CCANNNNNTGG	1 cut(s)	1730
VneI	GTGCAC	2 cut(s)	1267, 1959
VpaK11BI	GGWCC	2 cut(s)	13, 1749
XagI	CCTNNNNNAGG	1 cut(s)	59
XapI	RAATTY	7 cut(s)	122, 488, 556, 1010, 1367, 1375, 1544
XbaI	TCTAGA	1 cut(s)	1198
XceI	RCATGY	3 cut(s)	721, 1579, 1691
XmiI	GTMKAC	1 cut(s)	192
XmnI	GAANNNNTTC	1 cut(s)	1421
XspI	CTAG	6 cut(s)	380, 870, 1199, 1215, 1692, 1736
ZrmI	AGTACT	1 cut(s)	951

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.