Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0006144

Physical Location & Seq

Genomic Coordinates Reverse (-)

37173300 .. 37176423

Gene Structure 3124 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG354600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1965 bp

ATGGCTGACGTAGTCCAGTACCGACTTGAGCGTATGACCAATGAGCTCAACGATCTCGAGCAACGCGGAATTTTCACGCGCAGAGAGATATCTGAGATTGTCAAGAAGCGTACCAAGTTTGAGTACCGGCTCAAGCGTCCGAGCCCACTCAAGGAGGACTACCTTGCCTACATTGACTACGAGACTCAGCTTGATTCACTCCGTCGACTAAGAAAAAAATCAGTGATGCGTGAGCTGCAAAAGCAGGGCCTCAAGACCACAAAGAAGATGAAGAAGTCAGTTTCAGACTTTGCTGGAATCATGAGGATTGTTGATATTTATAGGCTTGCAGTCATGAGGTTTAAGGGAGATATTGAGCTCTGGTTTCGGTACCTTGAGTTTTGTCGACAGCGAAGGAATGGTAGAATGAAGAAGGTCCTGGCTGATGCAATCAAATTTCACCCAAAGGTCCCGGGTGTCTGGATCTATGCTGCAGCTTGGGAATTTGACCATAATTTGAATGTTGAAGCTGCCCGTGCTATCATGCAAAATGGGTTAAGAGTTTGCGCAACTTCAGAAGACCTCTGGATAGAGTATCTTCGCATGGAACTCACATTCCTCAATAAATTAAAGGCTCGGAAGGTTGCTCTTGGAGAGGATGAGGGCACTTTTGCCCGTGATCAGATAAGTTCTGATAAGAAACAGTGGAGAGATGAAAACAAAGACTTATTCATGTCCCTTAATGACGAAGGAGAAAATAATGAAAGGTCAGATGATGAAAATGAAAAGTCAATGAAGAAAATTAGTAAGTTTCAAGAGCAAGGTTTTAGCATACTAAGAACCATATATGCTGGAGCAGTAGAAGCTCTTCCCTCTAGTTTCAGTTTGAGAAAACGTTTTTTGGAAATCCTGGAAGCAACTGACTTGGTTAATTCGGAAGCAATATGTAAGGAAATACTAAGCGATATGAAGAGAGCCTTCTCAACAGAACCAGAGTATTGGGATTGGCTTGCAAGACTTGAATATAATCCTGCAAGTAGGGAAGATATTGGTGAAGATGTCACATCTCAGATAGAAAAAGCAGTTCAGGCTTACGAGGAGGCTATAGAAGTTTTACCTACAGCCATAATGCTCAACCATTATGCGAAATTTTTGAATGGTGTTGTCACTCTTCTAAAACTTGAAAACAAGCCTTCTGGGTTAGCTAGTCCATCTGCCGGTTATATTCCTCTTCTTTTGAGGGCTTACGAAAAGGTTAAAACTATGGGGTATATTGATGAGGATCTTGCTTGTCAGCATATTTCATTTCTTCTGCAACTTGGAAGACTAGAGGAAGCCCAGAAACTGGCAGAAAATCTTTGTTGTGGAATATTTTCAAATTCAATGAAGTTATGGCTATTAAGAGTCTCTGTAGGTATTAGACACTTTACAAGGGATTCCATTTCACCGAGTAAAGCTGACCTACTATCCATCTTTGAACTTCTTAAAGATGTTTTGACAAGAGTGTCCATTTCAGAAGCTGAGGACCTGTGGTTAATGGCCCTTAAATTCTTTGCAAATCAAAAACATTACTTTGACAAGTTGGTTGAGATTTCTGTTAGATCATTGACAAAAGATGGCGGCAGTGAACAAGGATTTTCCCTCTCTGCTGCTATTGTGCATTTTGTTCTTCAAAAGGATGGAGTACCGCATGCTAGAGAGATGTATAAACGCTTCATTGCTTTACCACACCCTGGGCTTGCACTATATAGAGCCTGCATTGAATTGGAATCAAACCTTGCATCCATTGGTGACAAAGATAGCCTCGTCAATGCCAGGAAATTATATGAATCTGCACTGAAAGCTTATGACCAAGATTTGAGCTTATGGCGAGATTACTATCTGATGGAGACCAAGATGGGAACATCAGAAACAGCTTCTGCCGTACATTGGCAAGCACGCAAGATTCTAAAAGACACAACTGCACTTGTTACACCAGATTTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000462 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016070 GO:0016072 GO:0022613 GO:0030490 GO:0030515 GO:0030684 GO:0030686 GO:0031974 GO:0031981 GO:0032040 GO:0032991 GO:0034388 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0042274 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0046483 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

U3_assoc_6

Protein Analysis

654

Amino Acids

75.55

Weight (kDa)

8.19

Isoelectric Point (pI)

43.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
U3_assoc_6	PF08640	9 - 82	4.5e-26	U3 small nucleolar RNA-associated protein 6
UTP6_C	PF24892	352 - 643	2.8e-16	U3 small nucleolar RNA-associated protein 6 C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0006144)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G28200
fragaria_vesca	FvH4_5g29980 FvH4_5g29980 FvH4_5g29980
malus_domestica	MD08G1079900.v1.1 MD15G1066800.v1.1
prunus_persica	Prupe.4G224400_v2.0.a1
pyrus_communis	pycom08g06600 pycom15g06340
rosa_chinensis	RchiOBHm_Chr7g0223851 RchiOBHm_Chr7g0223951
rosa_laevigata	RLG00000001926
rosa_multiflora	Rmu_sc0002469.1_g000009 Rmu_sc0004540.1_g000012 Rmu_sc0004540.1_g000016
rosa_roxburghii	Rroxscaffold_3G00235230
rosa_rugosa	Rorug07G0220900
rosa_samantha	Rh7AG363500 Rh7AG364100 Rh7BG354600 Rh7BG355500 Rh7CG382100 Rh7CG382900 Rh7DG358100 Rh7DG358600
rosa_wichuraiana	Rw7G030850 Rw7G030880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1483
Acc16I	TGCGCA	1 cut(s)	547
Acc65I	GGTACC	1 cut(s)	369
AccB1I	GGYRCC	1 cut(s)	369
AccB7I	CCANNNNNTGG	2 cut(s)	1324, 1712
AccI	GTMKAC	2 cut(s)	205, 385
AccII	CGCG	2 cut(s)	66, 79
AciI	CCGC	3 cut(s)	66, 1599, 1667
AclI	AACGTT	1 cut(s)	874
AclWI	GGATC	2 cut(s)	470, 1269
AcsI	RAATTY	6 cut(s)	69, 434, 482, 1127, 1357, 1526
AcuI	CTGAAG	1 cut(s)	537
AfaI	GTAC	6 cut(s)	20, 112, 125, 371, 1665, 1905
AfiI	CCNNNNNNNGG	5 cut(s)	151, 1196, 1324, 1712, 1908
AjnI	CCWGG	4 cut(s)	417, 888, 1711, 1793
AloI	GAACNNNNNNTCC	2 cut(s)	579, 611
Alw21I	GWGCWC	2 cut(s)	48, 360
Alw26I	GTCTC	3 cut(s)	176, 1390, 1862
AlwI	GGATC	2 cut(s)	470, 1269
AlwNI	CAGNNNCTG	3 cut(s)	1324, 1499, 1898
Ama87I	CYCGRG	2 cut(s)	56, 451
AoxI	GGCC	2 cut(s)	247, 1518
ApeKI	GCWGC	5 cut(s)	235, 470, 473, 509, 1628
ApoI	RAATTY	6 cut(s)	69, 434, 482, 1127, 1357, 1526
Asp700I	GAANNNNTTC	2 cut(s)	846, 1351
Asp718I	GGTACC	1 cut(s)	369
AspLEI	GCGC	2 cut(s)	81, 548
AspS9I	GGNCC	5 cut(s)	247, 415, 448, 1504, 1519
AsuC2I	CCSGG	2 cut(s)	452, 453
AsuHPI	GGTGA	4 cut(s)	431, 1043, 1416, 1781
AvaI	CYCGRG	2 cut(s)	56, 451
AvaII	GGWCC	3 cut(s)	415, 448, 1504
BaeGI	GKGCMC	1 cut(s)	647
BanI	GGYRCC	1 cut(s)	369
BanII	GRGCYC	3 cut(s)	48, 146, 360
BarI	GAAGNNNNNNTAC	4 cut(s)	831, 863, 1676, 1708
BbsI	GAAGAC	2 cut(s)	564, 1309
Bbv12I	GWGCWC	2 cut(s)	48, 360
BbvCI	CCTCAGC	1 cut(s)	1500
BbvI	GCAGC	5 cut(s)	222, 457, 485, 496, 1615
BccI	CCATC	6 cut(s)	1198, 1457, 1589, 1652, 1858, 1870
BceAI	ACGGC	1 cut(s)	1886
BciT130I	CCWGG	4 cut(s)	419, 890, 1713, 1795
BclI	TGATCA	1 cut(s)	658
BcnI	CCSGG	2 cut(s)	452, 453
BcoDI	GTCTC	3 cut(s)	176, 1390, 1862
BfaI	CTAG	4 cut(s)	855, 1185, 1307, 1674
BfmI	CTRYAG	4 cut(s)	471, 1083, 1098, 1389
BisI	GCNGC	6 cut(s)	236, 471, 474, 510, 1600, 1629
BlsI	GCNGC	6 cut(s)	237, 472, 475, 511, 1601, 1630
Bme1390I	CCNGG	6 cut(s)	419, 452, 453, 890, 1713, 1795
Bme18I	GGWCC	3 cut(s)	415, 448, 1504
BmeT110I	CYCGRG	2 cut(s)	56, 451
BmgT120I	GGNCC	5 cut(s)	247, 415, 448, 1504, 1519
BmiI	GGNNCC	2 cut(s)	371, 450
BmrFI	CCNGG	6 cut(s)	419, 452, 453, 890, 1713, 1795
BmsI	GCATC	3 cut(s)	216, 415, 1769
BpiI	GAAGAC	2 cut(s)	564, 1309
BpmI	CTGGAG	1 cut(s)	852
Bpu10I	CCTNAGC	1 cut(s)	1500
BpuEI	CTTGAG	5 cut(s)	47, 116, 134, 236, 395
BpuMI	CCSGG	2 cut(s)	452, 453
BsaBI	GATNNNNATC	2 cut(s)	1260, 1857
BsaI	GGTCTC	1 cut(s)	1862
BsaJI	CCNNGG	3 cut(s)	451, 1711, 1712
Bsc4I	CCNNNNNNNGG	5 cut(s)	151, 1196, 1324, 1712, 1908
Bse118I	RCCGGY	2 cut(s)	126, 1196
Bse1I	ACTGG	2 cut(s)	16, 1329
Bse3DI	GCAATG	1 cut(s)	1695
Bse8I	GATNNNNATC	2 cut(s)	1260, 1857
BseBI	CCWGG	4 cut(s)	419, 890, 1713, 1795
BseDI	CCNNGG	3 cut(s)	451, 1711, 1712
BseGI	GGATG	3 cut(s)	643, 1663, 1760
BseJI	GATNNNNATC	2 cut(s)	1260, 1857
BseLI	CCNNNNNNNGG	5 cut(s)	151, 1196, 1324, 1712, 1908
BseMI	GCAATG	1 cut(s)	1695
BseMII	CTCAG	4 cut(s)	84, 200, 1061, 1491
BseNI	ACTGG	2 cut(s)	16, 1329
BseRI	GAGGAG	1 cut(s)	1091
BseSI	GKGCMC	1 cut(s)	647
BseXI	GCAGC	5 cut(s)	222, 457, 485, 496, 1615
BsgI	GTGCAG	2 cut(s)	1797, 1926
Bsh1236I	CGCG	2 cut(s)	66, 79
BshFI	GGCC	2 cut(s)	249, 1520
BshNI	GGYRCC	1 cut(s)	369
BsiHKAI	GWGCWC	2 cut(s)	48, 360
BsiHKCI	CYCGRG	2 cut(s)	56, 451
BsiSI	CCGG	3 cut(s)	127, 452, 1197
BslFI	GGGAC	2 cut(s)	434, 700
BslI	CCNNNNNNNGG	5 cut(s)	151, 1196, 1324, 1712, 1908
BsmAI	GTCTC	3 cut(s)	176, 1390, 1862
BsmFI	GGGAC	2 cut(s)	434, 700
BsnI	GGCC	2 cut(s)	249, 1520
Bso31I	GGTCTC	1 cut(s)	1862
BsoBI	CYCGRG	2 cut(s)	56, 451
Bsp1286I	GDGCHC	4 cut(s)	48, 146, 360, 647
Bsp143I	GATC	5 cut(s)	52, 462, 658, 1261, 1580
BspACI	CCGC	3 cut(s)	66, 1599, 1667
BspANI	GGCC	2 cut(s)	249, 1520
BspCNI	CTCAG	4 cut(s)	85, 199, 1060, 1492
BspFNI	CGCG	2 cut(s)	66, 79
BspHI	TCATGA	2 cut(s)	300, 333
BspLI	GGNNCC	2 cut(s)	371, 450
BspMAI	CTGCAG	1 cut(s)	475
BspPI	GGATC	2 cut(s)	470, 1269
BspQI	GCTCTTC	1 cut(s)	852
BspT107I	GGYRCC	1 cut(s)	369
BspTNI	GGTCTC	1 cut(s)	1862
BsrDI	GCAATG	1 cut(s)	1695
BsrFI	RCCGGY	2 cut(s)	126, 1196
BsrI	ACTGG	2 cut(s)	16, 1329
BssAI	RCCGGY	2 cut(s)	126, 1196
BssECI	CCNNGG	3 cut(s)	451, 1711, 1712
BssMI	GATC	5 cut(s)	52, 462, 658, 1261, 1580
Bst2UI	CCWGG	4 cut(s)	419, 890, 1713, 1795
Bst4CI	ACNGT	1 cut(s)	684
Bst6I	CTCTTC	4 cut(s)	852, 944, 1155, 1215
BstC8I	GCNNGC	7 cut(s)	327, 990, 1671, 1719, 1735, 1914, 1918
BstDEI	CTNAG	7 cut(s)	93, 186, 209, 815, 938, 1047, 1500
BstF5I	GGATG	3 cut(s)	643, 1663, 1760
BstFNI	CGCG	2 cut(s)	66, 79
BstHHI	GCGC	2 cut(s)	81, 548
BstKTI	GATC	5 cut(s)	55, 465, 661, 1264, 1583
BstMAI	GTCTC	3 cut(s)	176, 1390, 1862
BstMBI	GATC	5 cut(s)	52, 462, 658, 1261, 1580
BstMWI	GCNNNNNNNGC	6 cut(s)	235, 241, 515, 842, 1067, 1820
BstNI	CCWGG	4 cut(s)	419, 890, 1713, 1795
BstNSI	RCATGY	1 cut(s)	1673
BstSCI	CCNGG	6 cut(s)	417, 450, 451, 888, 1711, 1793
BstSFI	CTRYAG	4 cut(s)	471, 1083, 1098, 1389
BstSLI	GKGCMC	1 cut(s)	647
BstUI	CGCG	2 cut(s)	66, 79
BstV1I	GCAGC	5 cut(s)	222, 457, 485, 496, 1615
BstV2I	GAAGAC	2 cut(s)	564, 1309
BstX2I	RGATCY	2 cut(s)	462, 1261
BstXI	CCANNNNNNTGG	1 cut(s)	978
BstYI	RGATCY	2 cut(s)	462, 1261
BsuRI	GGCC	2 cut(s)	249, 1520
BtsCI	GGATG	3 cut(s)	643, 1663, 1760
BtsI	GCAGTG	1 cut(s)	1609
BtsIMutI	CAGTG	4 cut(s)	228, 689, 1609, 1814
Cac8I	GCNNGC	7 cut(s)	327, 990, 1671, 1719, 1735, 1914, 1918
CaiI	CAGNNNCTG	3 cut(s)	1324, 1499, 1898
CciI	TCATGA	2 cut(s)	300, 333
CfoI	GCGC	2 cut(s)	81, 548
Cfr10I	RCCGGY	2 cut(s)	126, 1196
Cfr13I	GGNCC	5 cut(s)	247, 415, 448, 1504, 1519
Cfr9I	CCCGGG	1 cut(s)	451
CseI	GACGC	1 cut(s)	125
Csp6I	GTAC	6 cut(s)	19, 111, 124, 370, 1664, 1904
CviAII	CATG	6 cut(s)	301, 334, 523, 583, 712, 1670
CviQI	GTAC	6 cut(s)	19, 111, 124, 370, 1664, 1904
DdeI	CTNAG	7 cut(s)	93, 186, 209, 815, 938, 1047, 1500
DpnI	GATC	5 cut(s)	54, 464, 660, 1263, 1582
DpnII	GATC	5 cut(s)	52, 462, 658, 1261, 1580
DrdI	GACNNNNNNGTC	1 cut(s)	1483
DseDI	GACNNNNNNGTC	1 cut(s)	1483
Eam1104I	CTCTTC	4 cut(s)	852, 944, 1155, 1215
EarI	CTCTTC	4 cut(s)	852, 944, 1155, 1215
Ecl136II	GAGCTC	2 cut(s)	46, 358
Eco24I	GRGCYC	3 cut(s)	48, 146, 360
Eco31I	GGTCTC	1 cut(s)	1862
Eco32I	GATATC	1 cut(s)	90
Eco47I	GGWCC	3 cut(s)	415, 448, 1504
Eco53kI	GAGCTC	2 cut(s)	46, 358
Eco57I	CTGAAG	1 cut(s)	537
Eco88I	CYCGRG	2 cut(s)	56, 451
EcoICRI	GAGCTC	2 cut(s)	46, 358
EcoO109I	RGGNCCY	4 cut(s)	247, 415, 448, 1504
EcoRII	CCWGG	4 cut(s)	417, 888, 1711, 1793
EcoRV	GATATC	1 cut(s)	90
EcoT38I	GRGCYC	3 cut(s)	48, 146, 360
FaeI	CATG	6 cut(s)	304, 337, 526, 586, 715, 1673
FalI	AAGNNNNNCTT	2 cut(s)	941, 973
FaqI	GGGAC	2 cut(s)	434, 700
FatI	CATG	6 cut(s)	300, 333, 522, 582, 711, 1669
FbaI	TGATCA	1 cut(s)	658
FblI	GTMKAC	2 cut(s)	205, 385
Fnu4HI	GCNGC	6 cut(s)	236, 471, 474, 510, 1600, 1629
FokI	GGATG	3 cut(s)	650, 1670, 1747
FriOI	GRGCYC	3 cut(s)	48, 146, 360
Fsp4HI	GCNGC	6 cut(s)	236, 471, 474, 510, 1600, 1629
FspBI	CTAG	4 cut(s)	855, 1185, 1307, 1674
FspI	TGCGCA	1 cut(s)	547
GlaI	GCGC	2 cut(s)	80, 547
GluI	GCNGC	6 cut(s)	236, 471, 474, 510, 1600, 1629
GsuI	CTGGAG	1 cut(s)	852
HaeIII	GGCC	2 cut(s)	249, 1520
HapII	CCGG	3 cut(s)	127, 452, 1197
HgaI	GACGC	1 cut(s)	125
HhaI	GCGC	2 cut(s)	81, 548
Hin1II	CATG	6 cut(s)	304, 337, 526, 586, 715, 1673
Hin6I	GCGC	2 cut(s)	79, 546
HinP1I	GCGC	2 cut(s)	79, 546
HincII	GTYRAC	2 cut(s)	206, 386
HindII	GTYRAC	2 cut(s)	206, 386
HindIII	AAGCTT	1 cut(s)	1821
HinfI	GANTC	8 cut(s)	184, 194, 297, 1383, 1415, 1748, 1808, 1924
HpaII	CCGG	3 cut(s)	127, 452, 1197
HphI	GGTGA	4 cut(s)	431, 1043, 1416, 1781
Hpy166II	GTNNAC	3 cut(s)	206, 386, 1607
Hpy188III	TCNNGA	8 cut(s)	56, 103, 253, 301, 334, 460, 565, 794
Hpy8I	GTNNAC	3 cut(s)	206, 386, 1607
Hpy99I	CGWCG	1 cut(s)	207
HpyAV	CCTTC	6 cut(s)	387, 406, 613, 722, 967, 1182
HpyCH4III	ACNGT	1 cut(s)	684
HpyCH4IV	ACGT	2 cut(s)	9, 874
HpyF10VI	GCNNNNNNNGC	6 cut(s)	235, 241, 515, 842, 1067, 1820
HpyF3I	CTNAG	7 cut(s)	93, 186, 209, 815, 938, 1047, 1500
HpySE526I	ACGT	2 cut(s)	9, 874
Hsp92II	CATG	6 cut(s)	304, 337, 526, 586, 715, 1673
HspAI	GCGC	2 cut(s)	79, 546
KpnI	GGTACC	1 cut(s)	373
Ksp22I	TGATCA	1 cut(s)	658
Kzo9I	GATC	5 cut(s)	52, 462, 658, 1261, 1580
LguI	GCTCTTC	1 cut(s)	852
LmnI	GCTCC	1 cut(s)	833
Lsp1109I	GCAGC	5 cut(s)	222, 457, 485, 496, 1615
LweI	GCATC	3 cut(s)	216, 415, 1769
MaeI	CTAG	4 cut(s)	855, 1185, 1307, 1674
MaeII	ACGT	2 cut(s)	9, 874
MaeIII	GTNAC	4 cut(s)	1039, 1144, 1769, 1948
MalI	GATC	5 cut(s)	54, 464, 660, 1263, 1582
MboI	GATC	5 cut(s)	52, 462, 658, 1261, 1580
MflI	RGATCY	2 cut(s)	462, 1261
MhlI	GDGCHC	4 cut(s)	48, 146, 360, 647
MlyI	GAGTC	2 cut(s)	178, 1392
MroXI	GAANNNNTTC	2 cut(s)	846, 1351
MspI	CCGG	3 cut(s)	127, 452, 1197
MspR9I	CCNGG	6 cut(s)	419, 452, 453, 890, 1713, 1795
MvaI	CCWGG	4 cut(s)	419, 890, 1713, 1795
MvnI	CGCG	2 cut(s)	66, 79
MwoI	GCNNNNNNNGC	6 cut(s)	235, 241, 515, 842, 1067, 1820
NciI	CCSGG	2 cut(s)	452, 453
NdeII	GATC	5 cut(s)	52, 462, 658, 1261, 1580
NlaIII	CATG	6 cut(s)	304, 337, 526, 586, 715, 1673
NlaIV	GGNNCC	2 cut(s)	371, 450
NmuCI	GTSAC	3 cut(s)	1039, 1144, 1769
NsbI	TGCGCA	1 cut(s)	547
NspI	RCATGY	1 cut(s)	1673
PaeI	GCATGC	1 cut(s)	1673
PaeR7I	CTCGAG	1 cut(s)	56
PagI	TCATGA	2 cut(s)	300, 333
PasI	CCCWGGG	1 cut(s)	1712
PciSI	GCTCTTC	1 cut(s)	852
PdmI	GAANNNNTTC	2 cut(s)	846, 1351
PfeI	GAWTC	6 cut(s)	194, 297, 1415, 1748, 1808, 1924
PflFI	GACNNNGTC	1 cut(s)	11
PflMI	CCANNNNNTGG	2 cut(s)	1324, 1712
PfoI	TCCNGGA	1 cut(s)	888
PkrI	GCNGC	6 cut(s)	237, 472, 475, 511, 1601, 1630
PleI	GAGTC	2 cut(s)	178, 1391
PpsI	GAGTC	2 cut(s)	178, 1391
PpuMI	RGGWCCY	3 cut(s)	415, 448, 1504
Psp124BI	GAGCTC	2 cut(s)	48, 360
Psp1406I	AACGTT	1 cut(s)	874
Psp5II	RGGWCCY	3 cut(s)	415, 448, 1504
Psp6I	CCWGG	4 cut(s)	417, 888, 1711, 1793
PspGI	CCWGG	4 cut(s)	417, 888, 1711, 1793
PspN4I	GGNNCC	2 cut(s)	371, 450
PspPI	GGNCC	5 cut(s)	247, 415, 448, 1504, 1519
PspPPI	RGGWCCY	3 cut(s)	415, 448, 1504
PstI	CTGCAG	1 cut(s)	475
PstNI	CAGNNNCTG	3 cut(s)	1324, 1499, 1898
PsuI	RGATCY	2 cut(s)	462, 1261
PsyI	GACNNNGTC	1 cut(s)	11
RsaI	GTAC	6 cut(s)	20, 112, 125, 371, 1665, 1905
RsaNI	GTAC	6 cut(s)	19, 111, 124, 370, 1664, 1904
SacI	GAGCTC	2 cut(s)	48, 360
SalI	GTCGAC	2 cut(s)	204, 384
SapI	GCTCTTC	1 cut(s)	852
SatI	GCNGC	6 cut(s)	236, 471, 474, 510, 1600, 1629
Sau3AI	GATC	5 cut(s)	52, 462, 658, 1261, 1580
Sau96I	GGNCC	5 cut(s)	247, 415, 448, 1504, 1519
SchI	GAGTC	2 cut(s)	178, 1392
ScrFI	CCNGG	6 cut(s)	419, 452, 453, 890, 1713, 1795
SduI	GDGCHC	4 cut(s)	48, 146, 360, 647
SfaNI	GCATC	3 cut(s)	216, 415, 1769
SfcI	CTRYAG	4 cut(s)	471, 1083, 1098, 1389
Sfr274I	CTCGAG	1 cut(s)	56
SinI	GGWCC	3 cut(s)	415, 448, 1504
SlaI	CTCGAG	1 cut(s)	56
SmaI	CCCGGG	1 cut(s)	453
SmlI	CTYRAG	6 cut(s)	26, 56, 131, 149, 251, 374
SmoI	CTYRAG	6 cut(s)	26, 56, 131, 149, 251, 374
SphI	GCATGC	1 cut(s)	1673
SsiI	CCGC	3 cut(s)	66, 1599, 1667
SspI	AATATT	1 cut(s)	1350
SspMI	CTAG	4 cut(s)	855, 1185, 1307, 1674
SstI	GAGCTC	2 cut(s)	48, 360
StyD4I	CCNGG	6 cut(s)	417, 450, 451, 888, 1711, 1793
TaaI	ACNGT	1 cut(s)	684
TaiI	ACGT	2 cut(s)	12, 877
TaqI	TCGA	3 cut(s)	57, 205, 385
TauI	GCSGC	1 cut(s)	1602
TfiI	GAWTC	6 cut(s)	194, 297, 1415, 1748, 1808, 1924
TscAI	CASTG	4 cut(s)	228, 689, 1609, 1821
TseFI	GTSAC	3 cut(s)	1039, 1144, 1769
TseI	GCWGC	5 cut(s)	235, 470, 473, 509, 1628
Tsp45I	GTSAC	3 cut(s)	1039, 1144, 1769
TspGWI	ACGGA	1 cut(s)	191
TspMI	CCCGGG	1 cut(s)	451
TspRI	CASTG	4 cut(s)	228, 689, 1609, 1821
Tth111I	GACNNNGTC	1 cut(s)	11
Van91I	CCANNNNNTGG	2 cut(s)	1324, 1712
VpaK11BI	GGWCC	3 cut(s)	415, 448, 1504
XapI	RAATTY	6 cut(s)	69, 434, 482, 1127, 1357, 1526
XceI	RCATGY	1 cut(s)	1673
XhoI	CTCGAG	1 cut(s)	56
XmaI	CCCGGG	1 cut(s)	451
XmiI	GTMKAC	2 cut(s)	205, 385
XmnI	GAANNNNTTC	2 cut(s)	846, 1351
XspI	CTAG	4 cut(s)	855, 1185, 1307, 1674

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.