FvH4_5g38050

Belongs to the iron ascorbate-dependent oxidoreductase family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
Physical Location & Seq
Forward (+)
28100535 .. 28101946
1412 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g38050.t1

Sequence Viewer

Length: 1068 bp
ATGGCACCTACAACAGCCAACGTTGCCGACGATGCTAAAGTAGCAAGCATCAAGACACTTACCGGCACCGAACTCAACGCCGTACCGTCGGAGTACACCTATGTCAAGAATCCCAACGATCAAGGTGATGCAAGCGCCCCAGAACACTCAATCCCCACCATCGATTTCGCCCATCTCACCTCAAGCTCCCCTGAACTCCGGTCCAAAGCCATTGAAGAGCTAGGCAGAGCTTGTCAGGAATGGGGCTTCTTTCAGGTGATCAACCATGGTGTACCTGAGAGCCTGATGAAATCAATGATCGAGGCGTGCCACAAGTTTTTTGAACTTCCTGAGGAGGAGAAGAAGGAGTTCCAATCAAGGAAGCTGTTGGAGCCAATCAAGTGCGGGACAAGCTTTAACGTTGCCATCGACAAAGTTCGTCTGTGGAGGGATTACCTCAAGGTGATAGCACACCCCGAGTTCCATGCACTCCACAAGCCCGCCGAGTACAGCGACGTTTCATTTGAGTTCAGCAAACAAACTCGACAGGTTGCTACTGAGTTGTTGAGTGGAATATCAGAGAGCTTGGGGTTGGAGGCTGAGTACATAGCCAAGGCCATGAACTGGGACCGTGGCATGCAAATTCTCGCCGCTAACTACTATCCGGCGTGTCCGCAGCCCGACCTAGCCATCGGAATCCCTCCTCACACCGATCACGGACTTGTGACTCTTCTTATTCAGAATGACATGGGAGGCCTTGAAGTTCAGCACAATGGCCAATGGGTCCTTGTTGATTGTGCTCCGGGTTCTTTTGTTGTTAACATCGGTGATCAAATGCAGATCTTGACTAATGATAAGTATAAGAGCGTCTGGCATCGGGCTGTTGTGAACAACAGAGCTACAAGGATCTCCATAGCTGTACCACATGGACCTGCACTTGACACTGCTGCTCTTCCAATCCCGGAGTTGTTGGGCGGTGAAGCACCAAAATACATCGGAATGTCATACGAAGAGTTCATGGAACTTCAGGCCAGTCCGGCGGCGTACATGATGCCTTGTTTAGATCACCTGCGAGTCAAGGCCGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

356

Amino Acids

39.32

Weight (kDa)

5.26

Isoelectric Point (pI)

47.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIOX_N PF14226 51 - 159 1.5e-27 non-haem dioxygenase in morphine synthesis N-terminal
2OG-FeII_Oxy PF03171 207 - 302 7.6e-33 2OG-Fe(II) oxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1056
Acc36I ACCTGC 2 cut(s) 919, 1056
AccB1I GGYRCC 2 cut(s) 4, 65
AccB7I CCANNNNNTGG 1 cut(s) 603
AciI CCGC 6 cut(s) 384, 480, 630, 653, 954, 1019
AclI AACGTT 2 cut(s) 21, 399
AclWI GGATC 1 cut(s) 893
AcoI YGGCCR 1 cut(s) 754
AcsI RAATTY 1 cut(s) 621
AcuI CTGAAG 1 cut(s) 989
AfaI GTAC 7 cut(s) 84, 95, 273, 488, 584, 900, 1025
AfiI CCNNNNNNNGG 1 cut(s) 603
AgsI TTSAA 3 cut(s) 215, 323, 740
AloI GAACNNNNNNTCC 2 cut(s) 135, 167
AluBI AGCT 8 cut(s) 186, 220, 230, 364, 393, 564, 878, 896
AluI AGCT 8 cut(s) 186, 220, 230, 364, 393, 564, 878, 896
Alw21I GWGCWC 1 cut(s) 781
AlwI GGATC 1 cut(s) 893
Ama87I CYCGRG 1 cut(s) 455
AoxI GGCC 5 cut(s) 594, 733, 754, 1008, 1059
ApeKI GCWGC 2 cut(s) 655, 926
ApoI RAATTY 1 cut(s) 621
ArsI GACNNNNNNTTYG 2 cut(s) 485, 517
Asp700I GAANNNNTTC 1 cut(s) 347
AspLEI GCGC 1 cut(s) 137
AspS9I GGNCC 4 cut(s) 201, 607, 763, 908
AsuC2I CCSGG 2 cut(s) 783, 941
AsuHPI GGTGA 7 cut(s) 137, 169, 268, 454, 818, 968, 1037
AvaI CYCGRG 1 cut(s) 455
AvaII GGWCC 4 cut(s) 201, 607, 763, 908
AxyI CCTNAGG 1 cut(s) 330
BalI TGGCCA 1 cut(s) 756
BanI GGYRCC 2 cut(s) 4, 65
Bbv12I GWGCWC 1 cut(s) 781
BbvI GCAGC 2 cut(s) 667, 913
BccI CCATC 4 cut(s) 167, 180, 413, 677
BceAI ACGGC 1 cut(s) 65
BcgI CGANNNNNNTGC 2 cut(s) 446, 480
BclI TGATCA 2 cut(s) 258, 808
BcnI CCSGG 2 cut(s) 783, 941
BfaI CTAG 2 cut(s) 221, 665
BfoI RGCGCY 1 cut(s) 138
BfuAI ACCTGC 2 cut(s) 919, 1056
BglI GCCNNNNNGGC 1 cut(s) 1016
BglII AGATCT 1 cut(s) 819
BisI GCNGC 4 cut(s) 630, 656, 927, 1020
BlsI GCNGC 4 cut(s) 631, 657, 928, 1021
Bme1390I CCNGG 2 cut(s) 783, 941
Bme18I GGWCC 4 cut(s) 201, 607, 763, 908
BmeT110I CYCGRG 1 cut(s) 455
BmgT120I GGNCC 4 cut(s) 201, 607, 763, 908
BmiI GGNNCC 5 cut(s) 6, 67, 372, 608, 764
BmrFI CCNGG 2 cut(s) 783, 941
BmrI ACTGGG 1 cut(s) 613
BmsI GCATC 5 cut(s) 22, 57, 118, 862, 1020
BmuI ACTGGG 1 cut(s) 613
BpuEI CTTGAG 2 cut(s) 166, 422
BpuMI CCSGG 2 cut(s) 783, 941
Bsa29I ATCGAT 1 cut(s) 162
BsaJI CCNNGG 3 cut(s) 265, 591, 610
BsaWI WCCGGW 1 cut(s) 198
BsaXI ACNNNNNCTCC 2 cut(s) 566, 596
Bsc4I CCNNNNNNNGG 1 cut(s) 603
Bse118I RCCGGY 1 cut(s) 62
Bse1I ACTGG 2 cut(s) 608, 1011
Bse21I CCTNAGG 1 cut(s) 330
BseCI ATCGAT 1 cut(s) 162
BseDI CCNNGG 3 cut(s) 265, 591, 610
BseLI CCNNNNNNNGG 1 cut(s) 603
BseMII CTCAG 4 cut(s) 267, 321, 528, 570
BseNI ACTGG 2 cut(s) 608, 1011
BseRI GAGGAG 3 cut(s) 347, 350, 672
BseXI GCAGC 2 cut(s) 667, 913
BsgI GTGCAG 1 cut(s) 897
BshFI GGCC 5 cut(s) 596, 735, 756, 1010, 1061
BshNI GGYRCC 2 cut(s) 4, 65
BshVI ATCGAT 1 cut(s) 162
BsiHKAI GWGCWC 1 cut(s) 781
BsiHKCI CYCGRG 1 cut(s) 455
BsiSI CCGG 6 cut(s) 63, 199, 644, 782, 941, 1016
BslFI GGGAC 2 cut(s) 400, 620
BslI CCNNNNNNNGG 1 cut(s) 603
BsmFI GGGAC 2 cut(s) 400, 620
BsnI GGCC 5 cut(s) 596, 735, 756, 1010, 1061
BsoBI CYCGRG 1 cut(s) 455
Bsp1286I GDGCHC 1 cut(s) 781
Bsp143I GATC 8 cut(s) 118, 258, 297, 691, 808, 819, 885, 1042
Bsp19I CCATGG 1 cut(s) 265
BspACI CCGC 6 cut(s) 384, 480, 630, 653, 954, 1019
BspANI GGCC 5 cut(s) 596, 735, 756, 1010, 1061
BspCNI CTCAG 4 cut(s) 268, 322, 529, 571
BspDI ATCGAT 1 cut(s) 162
BspLI GGNNCC 5 cut(s) 6, 67, 372, 608, 764
BspMI ACCTGC 2 cut(s) 919, 1056
BspPI GGATC 1 cut(s) 893
BspQI GCTCTTC 2 cut(s) 210, 936
BspT107I GGYRCC 2 cut(s) 4, 65
BsrFI RCCGGY 1 cut(s) 62
BsrI ACTGG 2 cut(s) 608, 1011
BssAI RCCGGY 1 cut(s) 62
BssECI CCNNGG 3 cut(s) 265, 591, 610
BssMI GATC 8 cut(s) 118, 258, 297, 691, 808, 819, 885, 1042
BssT1I CCWWGG 2 cut(s) 265, 591
Bst4CI ACNGT 2 cut(s) 87, 611
Bst6I CTCTTC 4 cut(s) 210, 714, 936, 984
BstC8I GCNNGC 5 cut(s) 46, 133, 307, 480, 617
BstDEI CTNAG 4 cut(s) 276, 330, 537, 579
BstDSI CCRYGG 2 cut(s) 265, 610
BstH2I RGCGCY 1 cut(s) 138
BstHHI GCGC 1 cut(s) 137
BstKTI GATC 8 cut(s) 121, 261, 300, 694, 811, 822, 888, 1045
BstMBI GATC 8 cut(s) 118, 258, 297, 691, 808, 819, 885, 1042
BstMWI GCNNNNNNNGC 6 cut(s) 23, 32, 41, 370, 390, 1016
BstNSI RCATGY 1 cut(s) 619
BstSCI CCNGG 2 cut(s) 781, 939
BstV1I GCAGC 2 cut(s) 667, 913
BstX2I RGATCY 2 cut(s) 819, 885
BstYI RGATCY 2 cut(s) 819, 885
Bsu15I ATCGAT 1 cut(s) 162
Bsu36I CCTNAGG 1 cut(s) 330
BsuRI GGCC 5 cut(s) 596, 735, 756, 1010, 1061
BsuTUI ATCGAT 1 cut(s) 162
BtgI CCRYGG 2 cut(s) 265, 610
BtsI GCAGTG 1 cut(s) 921
BtsIMutI CAGTG 1 cut(s) 921
BveI ACCTGC 2 cut(s) 919, 1056
Cac8I GCNNGC 5 cut(s) 46, 133, 307, 480, 617
CfoI GCGC 1 cut(s) 137
Cfr10I RCCGGY 1 cut(s) 62
Cfr13I GGNCC 4 cut(s) 201, 607, 763, 908
ClaI ATCGAT 1 cut(s) 162
CseI GACGC 1 cut(s) 835
Csp6I GTAC 7 cut(s) 83, 94, 272, 487, 583, 899, 1024
CviAII CATG 8 cut(s) 266, 464, 598, 616, 727, 905, 997, 1027
CviQI GTAC 7 cut(s) 83, 94, 272, 487, 583, 899, 1024
DdeI CTNAG 4 cut(s) 276, 330, 537, 579
DpnI GATC 8 cut(s) 120, 260, 299, 693, 810, 821, 887, 1044
DpnII GATC 8 cut(s) 118, 258, 297, 691, 808, 819, 885, 1042
EaeI YGGCCR 1 cut(s) 754
Eam1104I CTCTTC 4 cut(s) 210, 714, 936, 984
EarI CTCTTC 4 cut(s) 210, 714, 936, 984
Eco130I CCWWGG 2 cut(s) 265, 591
Eco147I AGGCCT 1 cut(s) 735
Eco47I GGWCC 4 cut(s) 201, 607, 763, 908
Eco57I CTGAAG 1 cut(s) 989
Eco81I CCTNAGG 1 cut(s) 330
Eco88I CYCGRG 1 cut(s) 455
EcoO109I RGGNCCY 1 cut(s) 763
EcoT14I CCWWGG 2 cut(s) 265, 591
ErhI CCWWGG 2 cut(s) 265, 591
FaeI CATG 8 cut(s) 269, 467, 601, 619, 730, 908, 1000, 1030
FaqI GGGAC 2 cut(s) 400, 620
FatI CATG 8 cut(s) 265, 463, 597, 615, 726, 904, 996, 1026
FauI CCCGC 2 cut(s) 377, 487
FbaI TGATCA 2 cut(s) 258, 808
Fnu4HI GCNGC 4 cut(s) 630, 656, 927, 1020
Fsp4HI GCNGC 4 cut(s) 630, 656, 927, 1020
FspBI CTAG 2 cut(s) 221, 665
GlaI GCGC 1 cut(s) 136
GluI GCNGC 4 cut(s) 630, 656, 927, 1020
HaeII RGCGCY 1 cut(s) 138
HaeIII GGCC 5 cut(s) 596, 735, 756, 1010, 1061
HapII CCGG 6 cut(s) 63, 199, 644, 782, 941, 1016
HgaI GACGC 1 cut(s) 835
HhaI GCGC 1 cut(s) 137
Hin1II CATG 8 cut(s) 269, 467, 601, 619, 730, 908, 1000, 1030
Hin6I GCGC 1 cut(s) 135
HinP1I GCGC 1 cut(s) 135
HincII GTYRAC 1 cut(s) 799
HindII GTYRAC 1 cut(s) 799
HindIII AAGCTT 1 cut(s) 391
HinfI GANTC 4 cut(s) 109, 675, 706, 1053
HpaI GTTAAC 1 cut(s) 799
HpaII CCGG 6 cut(s) 63, 199, 644, 782, 941, 1016
HphI GGTGA 7 cut(s) 137, 169, 268, 454, 818, 968, 1037
Hpy166II GTNNAC 4 cut(s) 96, 272, 799, 868
Hpy188I TCNGA 5 cut(s) 91, 559, 674, 720, 977
Hpy188III TCNNGA 5 cut(s) 52, 106, 236, 329, 823
Hpy8I GTNNAC 4 cut(s) 96, 272, 799, 868
Hpy99I CGWCG 3 cut(s) 32, 91, 497
HpyAV CCTTC 1 cut(s) 337
HpyCH4III ACNGT 2 cut(s) 87, 611
HpyCH4IV ACGT 3 cut(s) 21, 399, 495
HpyCH4V TGCA 5 cut(s) 131, 467, 619, 817, 914
HpyF10VI GCNNNNNNNGC 6 cut(s) 23, 32, 41, 370, 390, 1016
HpyF3I CTNAG 4 cut(s) 276, 330, 537, 579
HpySE526I ACGT 3 cut(s) 21, 399, 495
Hsp92II CATG 8 cut(s) 269, 467, 601, 619, 730, 908, 1000, 1030
HspAI GCGC 1 cut(s) 135
Ksp22I TGATCA 2 cut(s) 258, 808
KspAI GTTAAC 1 cut(s) 799
Kzo9I GATC 8 cut(s) 118, 258, 297, 691, 808, 819, 885, 1042
LguI GCTCTTC 2 cut(s) 210, 936
LmnI GCTCC 3 cut(s) 191, 370, 784
Lsp1109I GCAGC 2 cut(s) 667, 913
LweI GCATC 5 cut(s) 22, 57, 118, 862, 1020
MaeI CTAG 2 cut(s) 221, 665
MaeII ACGT 3 cut(s) 21, 399, 495
MaeIII GTNAC 1 cut(s) 703
MalI GATC 8 cut(s) 120, 260, 299, 693, 810, 821, 887, 1044
MboI GATC 8 cut(s) 118, 258, 297, 691, 808, 819, 885, 1042
MboII GAAGA 5 cut(s) 227, 352, 701, 923, 1001
MflI RGATCY 2 cut(s) 819, 885
MhlI GDGCHC 1 cut(s) 781
MlsI TGGCCA 1 cut(s) 756
MluCI AATT 1 cut(s) 621
MluNI TGGCCA 1 cut(s) 756
MlyI GAGTC 2 cut(s) 700, 1062
MmeI TCCRAC 3 cut(s) 69, 348, 552
Mox20I TGGCCA 1 cut(s) 756
MroXI GAANNNNTTC 1 cut(s) 347
MscI TGGCCA 1 cut(s) 756
MseI TTAA 2 cut(s) 396, 798
MslI CAYNNNNRTG 1 cut(s) 977
Msp20I TGGCCA 1 cut(s) 756
MspI CCGG 6 cut(s) 63, 199, 644, 782, 941, 1016
MspR9I CCNGG 2 cut(s) 783, 941
MwoI GCNNNNNNNGC 6 cut(s) 23, 32, 41, 370, 390, 1016
NciI CCSGG 2 cut(s) 783, 941
NcoI CCATGG 1 cut(s) 265
NdeII GATC 8 cut(s) 118, 258, 297, 691, 808, 819, 885, 1042
NlaIII CATG 8 cut(s) 269, 467, 601, 619, 730, 908, 1000, 1030
NlaIV GGNNCC 5 cut(s) 6, 67, 372, 608, 764
NmeAIII GCCGAG 1 cut(s) 508
NmuCI GTSAC 1 cut(s) 703
NspI RCATGY 1 cut(s) 619
PaeI GCATGC 1 cut(s) 619
PaqCI CACCTGC 1 cut(s) 1056
PceI AGGCCT 1 cut(s) 735
PciSI GCTCTTC 2 cut(s) 210, 936
PcsI WCGNNNNNNNCGW 2 cut(s) 27, 405
PdmI GAANNNNTTC 1 cut(s) 347
PfeI GAWTC 2 cut(s) 109, 675
PflMI CCANNNNNTGG 1 cut(s) 603
PfoI TCCNGGA 1 cut(s) 939
PkrI GCNGC 4 cut(s) 631, 657, 928, 1021
PleI GAGTC 2 cut(s) 700, 1061
PpsI GAGTC 2 cut(s) 700, 1061
PpuMI RGGWCCY 1 cut(s) 763
Psp1406I AACGTT 2 cut(s) 21, 399
Psp5II RGGWCCY 1 cut(s) 763
PspN4I GGNNCC 5 cut(s) 6, 67, 372, 608, 764
PspPI GGNCC 4 cut(s) 201, 607, 763, 908
PspPPI RGGWCCY 1 cut(s) 763
PsuI RGATCY 2 cut(s) 819, 885
RsaI GTAC 7 cut(s) 84, 95, 273, 488, 584, 900, 1025
RsaNI GTAC 7 cut(s) 83, 94, 272, 487, 583, 899, 1024
RseI CAYNNNNRTG 1 cut(s) 977
SapI GCTCTTC 2 cut(s) 210, 936
SaqAI TTAA 2 cut(s) 396, 798
SatI GCNGC 4 cut(s) 630, 656, 927, 1020
Sau3AI GATC 8 cut(s) 118, 258, 297, 691, 808, 819, 885, 1042
Sau96I GGNCC 4 cut(s) 201, 607, 763, 908
SchI GAGTC 2 cut(s) 700, 1062
ScrFI CCNGG 2 cut(s) 783, 941
SduI GDGCHC 1 cut(s) 781
SfaNI GCATC 5 cut(s) 22, 57, 118, 862, 1020
SinI GGWCC 4 cut(s) 201, 607, 763, 908
SmiMI CAYNNNNRTG 1 cut(s) 977
SmlI CTYRAG 2 cut(s) 181, 437
SmoI CTYRAG 2 cut(s) 181, 437
SphI GCATGC 1 cut(s) 619
Sse9I AATT 1 cut(s) 621
SseBI AGGCCT 1 cut(s) 735
SsiI CCGC 6 cut(s) 384, 480, 630, 653, 954, 1019
SspMI CTAG 2 cut(s) 221, 665
StuI AGGCCT 1 cut(s) 735
StyD4I CCNGG 2 cut(s) 781, 939
StyI CCWWGG 2 cut(s) 265, 591
TaaI ACNGT 2 cut(s) 87, 611
TaiI ACGT 3 cut(s) 24, 402, 498
TaqI TCGA 4 cut(s) 162, 300, 408, 523
TasI AATT 1 cut(s) 621
TatI WGTACW 3 cut(s) 93, 486, 582
TauI GCSGC 2 cut(s) 632, 1022
TfiI GAWTC 2 cut(s) 109, 675
Tru1I TTAA 2 cut(s) 396, 798
Tru9I TTAA 2 cut(s) 396, 798
TscAI CASTG 1 cut(s) 928
TseFI GTSAC 1 cut(s) 703
TseI GCWGC 2 cut(s) 655, 926
Tsp45I GTSAC 1 cut(s) 703
TspDTI ATGAA 4 cut(s) 302, 489, 614, 985
TspGWI ACGGA 1 cut(s) 711
TspRI CASTG 1 cut(s) 928
Van91I CCANNNNNTGG 1 cut(s) 603
VpaK11BI GGWCC 4 cut(s) 201, 607, 763, 908
XapI RAATTY 1 cut(s) 621
XceI RCATGY 1 cut(s) 619
XmnI GAANNNNTTC 1 cut(s) 347
XspI CTAG 2 cut(s) 221, 665
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.