Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0005152

Physical Location & Seq

Genomic Coordinates Forward (+)

28940185 .. 28945949

Gene Structure 5765 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g39230.t4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2316 bp

ATGTTCATTGTCACCTTTTGGTTTCCCGCCAAAACCGTCAACCCCATCCTGTCACTTCCCGCCAAATCTGAACCTCCCCTTTTCTCTACCCCAATCCCCAAATTAAACAAAACAACTACTCTCTCTCTCTCTTCTCTCTCAGTCTCCGCCGCCGTCGCCATGAAGGACCTCAACTTCGACGCCGACAAAGCGCTAGCCAAGGAATTCCTCTCCAACTTCGCCGACGCGGTTGGGGAACCCAAATACATCAACATCCTCCAAGAAGTTGCGAATCGCAAAATCCGGGCAGTCCAGATTGATCTTGAGGACTTGTTCAATTACCAGGATTTCGACCAGGAATTTCTGACCAGGGTTACGGAAAACACGCGGCGATATGTTGGGATTTTCGCTGATGCTATTGATGAGCTCATGCCTCAGCCCACCGAGGGCTTTCCGGATGATGATCATGACATTTTGATGACACAAAGGTCTGATGATGGACCCGACAATATGGATGGTTCTGATCCCCATCAGAAGATGCCTCCCGAAATCAAGCGCTACTTTGAAGTTTACATAAGAGCGTCTTCAAAGGGGCAGCCATTTACCATTAGGGAGGTTAAGGCTTCATATATTGGTCAGCTTGTCAGGATATCTGGTATTGTGACGCGGTGTTCAGATGTTAAGCCATTGATGCAGGTTGCTGTCTACACGTGCGAAGAATGCGGCTTTGAGATTTACCAGGAAGTAACTGCTCGAATCTTTATGCCTCTGTTCGAGTGCCCATCTAGGCGTTGTAGTATTAACAAAACAAAGGGGAACCTTATTCTTCAACTCAGGGCATCAAAGTTTTTGAAGTTTCAGGAGGCCAAGATACAAGAGTTGGCTGAACATGTCCCAAAAGGCCATATTCCTCGGACAATGACTGTTCACTTCAGGGGTGAACTCACAAGAAAGGTAGCTCCAGGTGATGTTGTTGAGCTATCTGGCATATTTCTCCCTATCCCGTACACTGGTTTTAGAGCAATGCGAGCTGGCTTAGTTGCAGACACATACTTAGAAGCCATGTCTGTTACACATTACAAGAAGAAATATGAAGAGTATGAACTTAGAGGAGATGAGGAAGAACAAATTAGAAGTTTAGCTGATGATGGGGACATTTACAATAAGTTGGCACGATCATTGGCACCTGAAATTTATGGTCATGAAGATATAAAGAAGGCTCTACTTCTGCTCCTTGTGGGTGCCCCTCACAGGAAACTGAAGGATGGAATGAAGATTAGAGGAGATCTACATATCTGTTTGATGGGTGATCCTGGAGTTGCAAAAAGTCAGCTTCTTAAACACATAATTAATGTAGCACCCAGGGGAGTTTATACAACTGGTAAAGGAAGCAGTGGAGTTGGTCTGACTGCTGCTGTTCAGAAAGATCCGGTCACAAATGAAATGGTGCTGGAAGGAGGAGCATTGGTGCTAGCTGATATGGGCATTTGTGCTATCGATGAATTTGACAAGATGGATGAATTAGATCGTACAGCGATACATGAAGTTATGGAGCAGCAAACTGTCAGCATTGCTAAGGCTGGGATAACTACATCTTTGAATGCAAGAACTGCTGTTCTTGCCGCAGCTAATCCAGCATGGGGGAGATATGACCTACGGCGAACTCCAGCTGAAAACATTAATCTCCCGCCAGCACTTTTGTCAAGATTTGATCTTCTCTGGTTAATCCTGGATCGAGCAGATATGGATAGTGATCTTGAGATGGCTAGGCATATTGTCTATGTCCACCAGAATAAAGAATCTCCGGCTCTTGGCTTCACTCCACTGGAACCATCTGTTCTTCGTGCATATATTTCTGCTGCAAGAAGATTGTCTCCTTCTGTCCCTCTGGAACTTGAGGAGTACATTGCAAGTGCCTACTCCGCAATTCGGCAAGAAGAAGCTAAATCTAATGCTCCCCACTCCTATACCACTGTGCGAACTCTGCTCAGCATTCTTCGCATATCAGCTGCACTAGCAAGACTTCGATTCTCTGAAACAGTTGCTCAGAGTGACGTGGACGAGTCTCTCAGGCTAATGCAGATGTCAAAGTTCTCTTTATACTCAGACGATCGTCAGCGATCTGGACTTGATGCTATCTCAGATATCTATTCAATTCTGCGAGATGAAGCTGCCAGGACAAATAAGCTGGATGTGAGCTATGCACATGCCCTGAATTGGATTTCTAGAAAGGGTTACAGTGAAGCCCAACTGAAAGAATGTTTGGAGGAATATGCAGCCTTGAATGTGTGGCAGATCAATCCCCAAACTTTCGACATCAGATTCATTGATGCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000347 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006268 GO:0006725 GO:0006807 GO:0006996 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009743 GO:0009756 GO:0009987 GO:0010033 GO:0010182 GO:0016043 GO:0023052 GO:0032392 GO:0032508 GO:0032991 GO:0034641 GO:0034645 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0050789 GO:0050794 GO:0050896 GO:0051276 GO:0051716 GO:0065007 GO:0070887 GO:0071103 GO:0071310 GO:0071322 GO:0071704 GO:0071840 GO:0090304 GO:1901360 GO:1901576 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko03030 ko04110 ko04111 ko04113 map03030 map04110 map04111 map04113

Pfam Domains

Protein Families

MCM MCM_N MCM_OB

Protein Analysis

772

Amino Acids

86.46

Weight (kDa)

5.69

Isoelectric Point (pI)

44.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MCM_N	PF14551	66 - 183	6.6e-11	MCM N-terminal domain
MCM_OB	PF17207	196 - 327	2.3e-34	MCM OB domain
MCM	PF00493	367 - 589	8.1e-102	MCM P-loop domain
MCM_lid	PF17855	606 - 663	2.8e-10	MCM AAA-lid domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005152)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02060 AT4G02060
fragaria_vesca	FvH4_5g39230 FvH4_5g39230 FvH4_5g39230 FvH4_5g39230
malus_domestica	MD01G1012600.v1.1 MD03G1295400.v1.1 MD11G1312000.v1.1 MD11G1312600.v1.1 MD11G1314500.v1.1
prunus_persica	Prupe.8G272000_v2.0.a1
pyrus_communis	pycom01g04470
rosa_chinensis	RchiOBHm_Chr7g0241501
rosa_laevigata	RLG00000000575
rosa_multiflora	Rmu_co8153082.1_g000001 Rmu_sc0040921.1_g000002
rosa_roxburghii	Rroxscaffold_3G00219090 Rroxscaffold_3G00241100 Rroxscaffold_3G00241110 Rroxscaffold_3G00241120 Rroxscaffold_5G00346280
rosa_rugosa	Rorug03G0267600 Rorug07G0344400 Rorug07G0344500
rosa_samantha	Rh7AG498900 Rh7BG469600 Rh7CG515900 Rh7DG483700
rosa_wichuraiana	Rw7G042140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	466
Acc36I	ACCTGC	1 cut(s)	664
AccB1I	GGYRCC	2 cut(s)	1162, 1220
AccI	GTMKAC	1 cut(s)	684
AccII	CGCG	3 cut(s)	227, 367, 646
AccIII	TCCGGA	1 cut(s)	433
AclWI	GGATC	4 cut(s)	497, 1283, 1400, 1719
AcsI	RAATTY	4 cut(s)	203, 338, 1170, 1481
AcuI	CTGAAG	2 cut(s)	895, 1259
AcvI	CACGTG	1 cut(s)	690
AcyI	GRCGYC	1 cut(s)	180
AfaI	GTAC	3 cut(s)	986, 1510, 1883
AfeI	AGCGCT	2 cut(s)	192, 536
AfiI	CCNNNNNNNGG	7 cut(s)	425, 989, 1230, 1619, 1790, 1908, 2196
AflIII	ACRYGT	2 cut(s)	687, 868
AgsI	TTSAA	8 cut(s)	316, 545, 567, 809, 832, 1579, 2133, 2263
AjiI	CACGTC	1 cut(s)	2035
AjnI	CCWGG	9 cut(s)	321, 333, 347, 717, 940, 1291, 1340, 1707, 2153
AjuI	GAANNNNNNNTTGG	2 cut(s)	2225, 2257
Alw21I	GWGCWC	1 cut(s)	408
Alw26I	GTCTC	3 cut(s)	148, 1857, 2049
AlwI	GGATC	4 cut(s)	497, 1283, 1400, 1719
Aor13HI	TCCGGA	1 cut(s)	433
Aor51HI	AGCGCT	2 cut(s)	192, 536
AoxI	GGCC	2 cut(s)	843, 880
ApeKI	GCWGC	8 cut(s)	574, 1391, 1534, 1604, 1838, 1988, 2150, 2255
ApoI	RAATTY	4 cut(s)	203, 338, 1170, 1481
ArsI	GACNNNNNNTTYG	2 cut(s)	158, 190
AseI	ATTAAT	2 cut(s)	1329, 1659
AspLEI	GCGC	2 cut(s)	193, 537
AspS9I	GGNCC	2 cut(s)	166, 479
AsuC2I	CCSGG	1 cut(s)	284
AsuHPI	GGTGA	4 cut(s)	4, 929, 956, 1298
AsuNHI	GCTAGC	2 cut(s)	193, 1450
AvaII	GGWCC	2 cut(s)	166, 479
BaeGI	GKGCMC	2 cut(s)	761, 1225
BaeI	ACNNNNGTAYC	2 cut(s)	842, 875
BanI	GGYRCC	2 cut(s)	1162, 1220
BanII	GRGCYC	1 cut(s)	408
BbrPI	CACGTG	1 cut(s)	690
BbsI	GAAGAC	1 cut(s)	555
Bbv12I	GWGCWC	1 cut(s)	408
BbvCI	CCTCAGC	1 cut(s)	414
BbvI	GCAGC	8 cut(s)	586, 1378, 1546, 1616, 1825, 1975, 2137, 2267
BceAI	ACGGC	2 cut(s)	137, 1652
BciT130I	CCWGG	9 cut(s)	323, 335, 349, 719, 942, 1293, 1342, 1709, 2155
BclI	TGATCA	1 cut(s)	442
BcnI	CCSGG	1 cut(s)	284
BcoDI	GTCTC	3 cut(s)	148, 1857, 2049
BfaI	CTAG	6 cut(s)	194, 765, 1451, 1746, 1994, 2205
BfoI	RGCGCY	2 cut(s)	194, 538
BfuAI	ACCTGC	1 cut(s)	664
BglII	AGATCT	1 cut(s)	1264
BlpI	GCTNAGC	1 cut(s)	1967
Bme18I	GGWCC	2 cut(s)	166, 479
BmgBI	CACGTC	1 cut(s)	2035
BmgT120I	GGNCC	2 cut(s)	166, 479
BmiI	GGNNCC	6 cut(s)	237, 481, 797, 1164, 1222, 1809
BmsI	GCATC	6 cut(s)	382, 507, 660, 827, 2101, 2299
BmtI	GCTAGC	2 cut(s)	197, 1454
BoxI	GACNNNNGTC	1 cut(s)	2091
BpiI	GAAGAC	1 cut(s)	555
BpmI	CTGGAG	3 cut(s)	924, 1314, 1629
Bpu10I	CCTNAGC	2 cut(s)	414, 1554
Bpu1102I	GCTNAGC	1 cut(s)	1967
BpuEI	CTTGAG	3 cut(s)	323, 1757, 1895
BpuMI	CCSGG	1 cut(s)	284
Bsa29I	ATCGAT	1 cut(s)	1476
BsaAI	YACGTR	1 cut(s)	690
BsaBI	GATNNNNATC	3 cut(s)	441, 507, 1731
BsaHI	GRCGYC	1 cut(s)	180
BsaJI	CCNNGG	6 cut(s)	198, 348, 423, 890, 1340, 1341
BsaWI	WCCGGW	2 cut(s)	433, 1408
BsaXI	ACNNNNNCTCC	4 cut(s)	1194, 1224, 1431, 1461
Bsc4I	CCNNNNNNNGG	7 cut(s)	425, 989, 1230, 1619, 1790, 1908, 2196
Bse1I	ACTGG	3 cut(s)	994, 1363, 1809
Bse3DI	GCAATG	3 cut(s)	1008, 1548, 1884
Bse8I	GATNNNNATC	3 cut(s)	441, 507, 1731
BseAI	TCCGGA	1 cut(s)	433
BseBI	CCWGG	9 cut(s)	323, 335, 349, 719, 942, 1293, 1342, 1709, 2155
BseCI	ATCGAT	1 cut(s)	1476
BseDI	CCNNGG	6 cut(s)	198, 348, 423, 890, 1340, 1341
BseGI	GGATG	7 cut(s)	45, 252, 442, 499, 1249, 1501, 2176
BseJI	GATNNNNATC	3 cut(s)	441, 507, 1731
BseLI	CCNNNNNNNGG	7 cut(s)	425, 989, 1230, 1619, 1790, 1908, 2196
BseMI	GCAATG	3 cut(s)	1008, 1548, 1884
BseMII	CTCAG	8 cut(s)	153, 428, 826, 1981, 2039, 2062, 2097, 2133
BseNI	ACTGG	3 cut(s)	994, 1363, 1809
BseRI	GAGGAG	4 cut(s)	1104, 1275, 1452, 1892
BseSI	GKGCMC	2 cut(s)	761, 1225
BseXI	GCAGC	8 cut(s)	586, 1378, 1546, 1616, 1825, 1975, 2137, 2267
BseYI	CCCAGC	1 cut(s)	1559
BsgI	GTGCAG	1 cut(s)	1974
Bsh1236I	CGCG	3 cut(s)	227, 367, 646
Bsh1285I	CGRYCG	1 cut(s)	2092
BshFI	GGCC	2 cut(s)	845, 882
BshNI	GGYRCC	2 cut(s)	1162, 1220
BshVI	ATCGAT	1 cut(s)	1476
BsiEI	CGRYCG	1 cut(s)	2092
BsiHKAI	GWGCWC	1 cut(s)	408
BsiSI	CCGG	4 cut(s)	283, 434, 1409, 1784
BslFI	GGGAC	3 cut(s)	857, 1145, 1847
BslI	CCNNNNNNNGG	7 cut(s)	425, 989, 1230, 1619, 1790, 1908, 2196
BsmAI	GTCTC	3 cut(s)	148, 1857, 2049
BsmFI	GGGAC	3 cut(s)	857, 1145, 1847
BsmI	GAATGC	3 cut(s)	704, 1585, 1971
BsnI	GGCC	2 cut(s)	845, 882
Bsp1286I	GDGCHC	3 cut(s)	408, 761, 1225
Bsp13I	TCCGGA	1 cut(s)	433
Bsp1720I	GCTNAGC	1 cut(s)	1967
BspANI	GGCC	2 cut(s)	845, 882
BspCNI	CTCAG	8 cut(s)	152, 427, 825, 1980, 2038, 2061, 2096, 2132
BspDI	ATCGAT	1 cut(s)	1476
BspEI	TCCGGA	1 cut(s)	433
BspFNI	CGCG	3 cut(s)	227, 367, 646
BspHI	TCATGA	2 cut(s)	445, 1180
BspLI	GGNNCC	6 cut(s)	237, 481, 797, 1164, 1222, 1809
BspMI	ACCTGC	1 cut(s)	664
BspOI	GCTAGC	2 cut(s)	197, 1454
BspPI	GGATC	4 cut(s)	497, 1283, 1400, 1719
BspT107I	GGYRCC	2 cut(s)	1162, 1220
BsrDI	GCAATG	3 cut(s)	1008, 1548, 1884
BsrI	ACTGG	3 cut(s)	994, 1363, 1809
BssECI	CCNNGG	6 cut(s)	198, 348, 423, 890, 1340, 1341
BssNI	GRCGYC	1 cut(s)	180
BssT1I	CCWWGG	1 cut(s)	198
Bst2UI	CCWGG	9 cut(s)	323, 335, 349, 719, 942, 1293, 1342, 1709, 2155
Bst4CI	ACNGT	6 cut(s)	37, 904, 1543, 1954, 2020, 2219
Bst6I	CTCTTC	2 cut(s)	136, 1068
BstACI	GRCGYC	1 cut(s)	180
BstAPI	GCANNNNNTGC	1 cut(s)	1589
BstBAI	YACGTR	1 cut(s)	690
BstC8I	GCNNGC	5 cut(s)	195, 1008, 1012, 1452, 1671
BstF5I	GGATG	7 cut(s)	45, 252, 442, 499, 1249, 1501, 2176
BstFNI	CGCG	3 cut(s)	227, 367, 646
BstH2I	RGCGCY	2 cut(s)	194, 538
BstHHI	GCGC	2 cut(s)	193, 537
BstMAI	GTCTC	3 cut(s)	148, 1857, 2049
BstMCI	CGRYCG	1 cut(s)	2092
BstNI	CCWGG	9 cut(s)	323, 335, 349, 719, 942, 1293, 1342, 1709, 2155
BstNSI	RCATGY	2 cut(s)	872, 2189
BstPAI	GACNNNNGTC	1 cut(s)	2091
BstSLI	GKGCMC	2 cut(s)	761, 1225
BstUI	CGCG	3 cut(s)	227, 367, 646
BstV1I	GCAGC	8 cut(s)	586, 1378, 1546, 1616, 1825, 1975, 2137, 2267
BstV2I	GAAGAC	1 cut(s)	555
BstX2I	RGATCY	2 cut(s)	1264, 1405
BstYI	RGATCY	2 cut(s)	1264, 1405
Bsu15I	ATCGAT	1 cut(s)	1476
BsuRI	GGCC	2 cut(s)	845, 882
BsuTUI	ATCGAT	1 cut(s)	1476
BtrI	CACGTC	1 cut(s)	2035
BtsCI	GGATG	7 cut(s)	45, 252, 442, 499, 1249, 1501, 2176
BtsI	GCAGTG	1 cut(s)	1378
BtsIMutI	CAGTG	5 cut(s)	987, 1378, 1802, 1950, 2224
BveI	ACCTGC	1 cut(s)	664
Cac8I	GCNNGC	5 cut(s)	195, 1008, 1012, 1452, 1671
CciI	TCATGA	2 cut(s)	445, 1180
CfoI	GCGC	2 cut(s)	193, 537
Cfr13I	GGNCC	2 cut(s)	166, 479
ClaI	ATCGAT	1 cut(s)	1476
CseI	GACGC	4 cut(s)	188, 233, 549, 652
Csp6I	GTAC	3 cut(s)	985, 1509, 1882
CviAII	CATG	9 cut(s)	160, 409, 446, 869, 1042, 1181, 1520, 1617, 2186
CviQI	GTAC	3 cut(s)	985, 1509, 1882
DrdI	GACNNNNNNGTC	1 cut(s)	466
DseDI	GACNNNNNNGTC	1 cut(s)	466
Eam1104I	CTCTTC	2 cut(s)	136, 1068
EarI	CTCTTC	2 cut(s)	136, 1068
EciI	GGCGGA	1 cut(s)	136
Ecl136II	GAGCTC	1 cut(s)	406
Eco130I	CCWWGG	1 cut(s)	198
Eco24I	GRGCYC	1 cut(s)	408
Eco32I	GATATC	2 cut(s)	630, 2125
Eco47I	GGWCC	2 cut(s)	166, 479
Eco47III	AGCGCT	2 cut(s)	192, 536
Eco53kI	GAGCTC	1 cut(s)	406
Eco57I	CTGAAG	2 cut(s)	895, 1259
Eco72I	CACGTG	1 cut(s)	690
EcoICRI	GAGCTC	1 cut(s)	406
EcoO109I	RGGNCCY	1 cut(s)	166
EcoRI	GAATTC	1 cut(s)	203
EcoRII	CCWGG	9 cut(s)	321, 333, 347, 717, 940, 1291, 1340, 1707, 2153
EcoRV	GATATC	2 cut(s)	630, 2125
EcoT14I	CCWWGG	1 cut(s)	198
EcoT38I	GRGCYC	1 cut(s)	408
ErhI	CCWWGG	1 cut(s)	198
FaeI	CATG	9 cut(s)	163, 412, 449, 872, 1045, 1184, 1523, 1620, 2189
FalI	AAGNNNNNCTT	4 cut(s)	524, 556, 547, 579
FaqI	GGGAC	3 cut(s)	857, 1145, 1847
FatI	CATG	9 cut(s)	159, 408, 445, 868, 1041, 1180, 1519, 1616, 2185
FauI	CCCGC	3 cut(s)	34, 67, 1674
FbaI	TGATCA	1 cut(s)	442
FblI	GTMKAC	1 cut(s)	684
FokI	GGATG	7 cut(s)	32, 239, 449, 506, 1256, 1508, 2183
FriOI	GRGCYC	1 cut(s)	408
FspBI	CTAG	6 cut(s)	194, 765, 1451, 1746, 1994, 2205
GlaI	GCGC	2 cut(s)	192, 536
GsaI	CCCAGC	1 cut(s)	1563
GsuI	CTGGAG	3 cut(s)	924, 1314, 1629
HaeII	RGCGCY	2 cut(s)	194, 538
HaeIII	GGCC	2 cut(s)	845, 882
HapII	CCGG	4 cut(s)	283, 434, 1409, 1784
HgaI	GACGC	4 cut(s)	188, 233, 549, 652
HhaI	GCGC	2 cut(s)	193, 537
Hin1I	GRCGYC	1 cut(s)	180
Hin1II	CATG	9 cut(s)	163, 412, 449, 872, 1045, 1184, 1523, 1620, 2189
Hin6I	GCGC	2 cut(s)	191, 535
HinP1I	GCGC	2 cut(s)	191, 535
HincII	GTYRAC	1 cut(s)	40
HindII	GTYRAC	1 cut(s)	40
HinfI	GANTC	6 cut(s)	271, 735, 1778, 2007, 2042, 2301
HpaII	CCGG	4 cut(s)	283, 434, 1409, 1784
HphI	GGTGA	4 cut(s)	4, 929, 956, 1298
Hpy166II	GTNNAC	8 cut(s)	40, 550, 685, 907, 920, 987, 1765, 2038
Hpy8I	GTNNAC	8 cut(s)	40, 550, 685, 907, 920, 987, 1765, 2038
Hpy99I	CGWCG	3 cut(s)	158, 182, 227
HpyAV	CCTTC	5 cut(s)	157, 1189, 1234, 1427, 1866
HpyCH4III	ACNGT	6 cut(s)	37, 904, 1543, 1954, 2020, 2219
HpyCH4IV	ACGT	2 cut(s)	689, 2034
HpySE526I	ACGT	2 cut(s)	689, 2034
Hsp92I	GRCGYC	1 cut(s)	180
Hsp92II	CATG	9 cut(s)	163, 412, 449, 872, 1045, 1184, 1523, 1620, 2189
HspAI	GCGC	2 cut(s)	191, 535
Kpn2I	TCCGGA	1 cut(s)	433
Ksp22I	TGATCA	1 cut(s)	442
LmnI	GCTCC	5 cut(s)	943, 1215, 1439, 1531, 1939
Lsp1109I	GCAGC	8 cut(s)	586, 1378, 1546, 1616, 1825, 1975, 2137, 2267
LweI	GCATC	6 cut(s)	382, 507, 660, 827, 2101, 2299
MaeI	CTAG	6 cut(s)	194, 765, 1451, 1746, 1994, 2205
MaeII	ACGT	2 cut(s)	689, 2034
MaeIII	GTNAC	9 cut(s)	10, 51, 352, 640, 724, 1048, 1411, 2030, 2213
MflI	RGATCY	2 cut(s)	1264, 1405
MhlI	GDGCHC	3 cut(s)	408, 761, 1225
MlyI	GAGTC	1 cut(s)	2051
MmeI	TCCRAC	1 cut(s)	237
MroI	TCCGGA	1 cut(s)	433
MseI	TTAA	8 cut(s)	104, 597, 660, 780, 1317, 1329, 1659, 1703
MslI	CAYNNNNRTG	1 cut(s)	455
MspA1I	CMGCKG	2 cut(s)	1649, 1988
MspI	CCGG	4 cut(s)	283, 434, 1409, 1784
Mva1269I	GAATGC	3 cut(s)	704, 1585, 1971
MvaI	CCWGG	9 cut(s)	323, 335, 349, 719, 942, 1293, 1342, 1709, 2155
MvnI	CGCG	3 cut(s)	227, 367, 646
NciI	CCSGG	1 cut(s)	284
NheI	GCTAGC	2 cut(s)	193, 1450
NlaIII	CATG	9 cut(s)	163, 412, 449, 872, 1045, 1184, 1523, 1620, 2189
NlaIV	GGNNCC	6 cut(s)	237, 481, 797, 1164, 1222, 1809
NmuCI	GTSAC	5 cut(s)	10, 51, 640, 1411, 2030
NspI	RCATGY	2 cut(s)	872, 2189
PagI	TCATGA	2 cut(s)	445, 1180
PasI	CCCWGGG	1 cut(s)	1341
PciI	ACATGT	1 cut(s)	868
PctI	GAATGC	3 cut(s)	704, 1585, 1971
PfeI	GAWTC	5 cut(s)	271, 735, 1778, 2007, 2301
PfoI	TCCNGGA	2 cut(s)	1291, 1707
Ple19I	CGATCG	1 cut(s)	2092
PleI	GAGTC	1 cut(s)	2050
PmaCI	CACGTG	1 cut(s)	690
PmlI	CACGTG	1 cut(s)	690
PpsI	GAGTC	1 cut(s)	2050
Ppu21I	YACGTR	1 cut(s)	690
PpuMI	RGGWCCY	1 cut(s)	166
PscI	ACATGT	1 cut(s)	868
PshAI	GACNNNNGTC	1 cut(s)	2091
PshBI	ATTAAT	2 cut(s)	1329, 1659
Psp124BI	GAGCTC	1 cut(s)	408
Psp5II	RGGWCCY	1 cut(s)	166
Psp6I	CCWGG	9 cut(s)	321, 333, 347, 717, 940, 1291, 1340, 1707, 2153
PspCI	CACGTG	1 cut(s)	690
PspFI	CCCAGC	1 cut(s)	1559
PspGI	CCWGG	9 cut(s)	321, 333, 347, 717, 940, 1291, 1340, 1707, 2153
PspN4I	GGNNCC	6 cut(s)	237, 481, 797, 1164, 1222, 1809
PspPI	GGNCC	2 cut(s)	166, 479
PspPPI	RGGWCCY	1 cut(s)	166
PsuI	RGATCY	2 cut(s)	1264, 1405
PvuI	CGATCG	1 cut(s)	2092
PvuII	CAGCTG	2 cut(s)	1649, 1988
RsaI	GTAC	3 cut(s)	986, 1510, 1883
RsaNI	GTAC	3 cut(s)	985, 1509, 1882
RseI	CAYNNNNRTG	1 cut(s)	455
SacI	GAGCTC	1 cut(s)	408
SaqAI	TTAA	8 cut(s)	104, 597, 660, 780, 1317, 1329, 1659, 1703
Sau96I	GGNCC	2 cut(s)	166, 479
SchI	GAGTC	1 cut(s)	2051
SduI	GDGCHC	3 cut(s)	408, 761, 1225
SfaNI	GCATC	6 cut(s)	382, 507, 660, 827, 2101, 2299
SinI	GGWCC	2 cut(s)	166, 479
SmiMI	CAYNNNNRTG	1 cut(s)	455
SmlI	CTYRAG	3 cut(s)	302, 1736, 1874
SmoI	CTYRAG	3 cut(s)	302, 1736, 1874
SspMI	CTAG	6 cut(s)	194, 765, 1451, 1746, 1994, 2205
SstI	GAGCTC	1 cut(s)	408
StyI	CCWWGG	1 cut(s)	198
TaaI	ACNGT	6 cut(s)	37, 904, 1543, 1954, 2020, 2219
TaiI	ACGT	2 cut(s)	692, 2037
TaqI	TCGA	8 cut(s)	177, 330, 733, 753, 1476, 1714, 2005, 2292
TatI	WGTACW	1 cut(s)	1881
TauI	GCSGC	4 cut(s)	152, 370, 705, 1604
TfiI	GAWTC	5 cut(s)	271, 735, 1778, 2007, 2301
Tru1I	TTAA	8 cut(s)	104, 597, 660, 780, 1317, 1329, 1659, 1703
Tru9I	TTAA	8 cut(s)	104, 597, 660, 780, 1317, 1329, 1659, 1703
TscAI	CASTG	5 cut(s)	994, 1378, 1809, 1957, 2224
TseFI	GTSAC	5 cut(s)	10, 51, 640, 1411, 2030
TseI	GCWGC	8 cut(s)	574, 1391, 1534, 1604, 1838, 1988, 2150, 2255
Tsp45I	GTSAC	5 cut(s)	10, 51, 640, 1411, 2030
TspGWI	ACGGA	1 cut(s)	371
TspRI	CASTG	5 cut(s)	994, 1378, 1809, 1957, 2224
VpaK11BI	GGWCC	2 cut(s)	166, 479
VspI	ATTAAT	2 cut(s)	1329, 1659
XapI	RAATTY	4 cut(s)	203, 338, 1170, 1481
XbaI	TCTAGA	1 cut(s)	2204
XceI	RCATGY	2 cut(s)	872, 2189
XmiI	GTMKAC	1 cut(s)	684
XspI	CTAG	6 cut(s)	194, 765, 1451, 1746, 1994, 2205

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.