Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7C

Orthogroup ID

OG0005152

Physical Location & Seq

Genomic Coordinates Forward (+)

69521861 .. 69527854

Gene Structure 5994 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG515900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1668 bp

ATGAAGGACCTCAACTTCGACGCCGACAAAGCGCTAGCGAAGGAATTCCTCTCCAACTTTGCCGATGCGGTTGGGGAACCCAAATACATGAACATCCTTCAAGAAGTTGCAAATCGCAAAATTCGGGCAATCCAGATTGATCTTGAGGATTTGTTTAATTACCAGGATTTCGACGAAGAATTCCTCAGACGGGTTACTGAAAACACCCGGCGGTATGTGGGTATTTTTGCTGATGCTATTGATGAGCTCATGCCGCAGCCCACTGAGGCCTTTACAGATGATGATCATGACATCTTGATGACACAAAGGTCTGATGATGGACCGGAGAATGTGGATGGTTCTGATCCACATCAGAAGATGCCTCCGGAAATCAAGCGCTACTTTGAAGTTTACATAAGAGCATCTTCAAAGGGGCAGCCATTTACCATCAGGGAGGTTAAGGCTTCATATATTGGTCAGCTTGTGAGGATATCAGGTATTGTGACGCGGTGTTCGGATGTTAAGCCATTGATGCAGGTTGCTGTGTACACGTGTGAAGAATGCGGTTTTGAGATTTACCAGGAAGTAACTGCTCGAATCTTTATGCCTCTGTTCGAATGCCCATCTAGGCGTTGTAATATTAACAAAACAAAGGGGAACCTTATTCTTCAGCTCAGGGCATCAAAGTTTTTGAAGTTTCAGGAGGCCAAGATACAAGAGTTGGCTGAACATGTTCCAAAAGGCCATATTCCTCGGACAATGACTGTTCACTTCAGGGGTGAACTTACAAGAAAGGTAGCTCCAGGTGATGTTGTTGAATTATCTGGCATATTTCTCCCCATTCCATACACTGGTTTTAGAGCAATGCGAGCTGGCTTAGTTGCAGATACGTACTTAGAAGCCATGTCTGTTACACATTACAAGAAAAAATATGAAGAGTATGAACTTAGAGCAGATGAGGAAGAACAAATTAGAAGTTTAGCTGATGATGGGGACATTTACAATAAGTTGGCACGATCATTGGCACCTGAAATTTATGGTCATGAAGATATAAAGAAGGCTCTGCTTCTGCTCCTAGTGGGTGCCCCTCACAGGAAACTGAAGGATGGAATGAAGATTAGAGGAGATTTACATATCTGTTTGATGGGTGATCCTGGAGTTGCAAAAAGTCAGCTTCTCAAACACATAATTAATGTAGCACCCAGGGGAGTTTATACAACTGGTAAAGGAAGTAGTGGAGTTGGTCTGACTGCTGCTGTTCAGAAAGATCCGGTCACAAATGAAATGGTCTTGGAAGGAGGAGCATTGGTGCTAGCTGATATGGGCATTTGTGCTATCGATGAGTTTGACAAGATGGATGAATTAGATCGTACAGCAATACATGAAGTTATGGAGCAGCAAACCGTCAGCATTGCTAAGGCTGGGATAACTACATCGTTGAATGCAAGAACTGCTGTTCTTGCTGCAGCTAATCCAGCATGGGGGAGATATGACCTACGTAGAACTCCAGCTGAAAACATTAATCTTCCTCCAGCCCTTTTGTCAAGATTTGATCTTCTCTGGTTGATCCTGGATCGAGCAGATATGGATAGTGATCTTGAGATGGCCAGGCATATTGTTTATGTCCACCAGAATAAAGAATCTCCGGCTCTTGGCTTCACTCCACTTGAACCATCTGTTCTTCGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000347 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006268 GO:0006725 GO:0006807 GO:0006996 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009743 GO:0009756 GO:0009987 GO:0010033 GO:0010182 GO:0016043 GO:0023052 GO:0032392 GO:0032508 GO:0032991 GO:0034641 GO:0034645 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0050789 GO:0050794 GO:0050896 GO:0051276 GO:0051716 GO:0065007 GO:0070887 GO:0071103 GO:0071310 GO:0071322 GO:0071704 GO:0071840 GO:0090304 GO:1901360 GO:1901576 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko03030 ko04110 ko04111 ko04113 map03030 map04110 map04111 map04113

Pfam Domains

Protein Families

MCM MCM_N MCM_OB

Protein Analysis

555

Amino Acids

62.46

Weight (kDa)

5.54

Isoelectric Point (pI)

45.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MCM_N	PF14551	13 - 128	7.4e-12	MCM N-terminal domain
MCM_OB	PF17207	143 - 274	1.2e-34	MCM OB domain
MCM	PF00493	314 - 536	5.2e-102	MCM P-loop domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005152)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02060 AT4G02060
fragaria_vesca	FvH4_5g39230 FvH4_5g39230 FvH4_5g39230 FvH4_5g39230
malus_domestica	MD01G1012600.v1.1 MD03G1295400.v1.1 MD11G1312000.v1.1 MD11G1312600.v1.1 MD11G1314500.v1.1
prunus_persica	Prupe.8G272000_v2.0.a1
pyrus_communis	pycom01g04470
rosa_chinensis	RchiOBHm_Chr7g0241501
rosa_laevigata	RLG00000000575
rosa_multiflora	Rmu_co8153082.1_g000001 Rmu_sc0040921.1_g000002
rosa_roxburghii	Rroxscaffold_3G00219090 Rroxscaffold_3G00241100 Rroxscaffold_3G00241110 Rroxscaffold_3G00241120 Rroxscaffold_5G00346280
rosa_rugosa	Rorug03G0267600 Rorug07G0344400 Rorug07G0344500
rosa_samantha	Rh7AG498900 Rh7BG469600 Rh7CG515900 Rh7DG483700
rosa_wichuraiana	Rw7G042140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	307
Acc36I	ACCTGC	1 cut(s)	505
AccB1I	GGYRCC	2 cut(s)	1003, 1061
AccB7I	CCANNNNNTGG	1 cut(s)	830
AccII	CGCG	1 cut(s)	487
AccIII	TCCGGA	1 cut(s)	364
AciI	CCGC	5 cut(s)	68, 211, 254, 487, 543
AclWI	GGATC	5 cut(s)	338, 1124, 1241, 1540, 1560
AcoI	YGGCCR	1 cut(s)	1584
AcsI	RAATTY	4 cut(s)	44, 120, 179, 1011
AcuI	CTGAAG	3 cut(s)	632, 736, 1100
AcvI	CACGTG	1 cut(s)	531
AcyI	GRCGYC	1 cut(s)	21
AfaI	GTAC	3 cut(s)	527, 872, 1351
AfeI	AGCGCT	2 cut(s)	33, 377
AfiI	CCNNNNNNNGG	5 cut(s)	190, 830, 1071, 1460, 1631
AflIII	ACRYGT	3 cut(s)	528, 530, 709
AgsI	TTSAA	7 cut(s)	101, 386, 408, 673, 797, 1420, 1649
AjnI	CCWGG	7 cut(s)	162, 558, 781, 1132, 1181, 1548, 1586
Alw21I	GWGCWC	1 cut(s)	249
AlwI	GGATC	5 cut(s)	338, 1124, 1241, 1540, 1560
Aor13HI	TCCGGA	1 cut(s)	364
Aor51HI	AGCGCT	2 cut(s)	33, 377
AoxI	GGCC	4 cut(s)	267, 684, 721, 1584
ApeKI	GCWGC	6 cut(s)	256, 415, 1232, 1375, 1442, 1445
ApoI	RAATTY	4 cut(s)	44, 120, 179, 1011
ArsI	GACNNNNNNTTYG	3 cut(s)	31, 475, 507
AseI	ATTAAT	2 cut(s)	1170, 1500
Asp700I	GAANNNNTTC	2 cut(s)	44, 711
AspLEI	GCGC	2 cut(s)	34, 378
AspS9I	GGNCC	2 cut(s)	7, 320
AsuC2I	CCSGG	1 cut(s)	208
AsuHPI	GGTGA	3 cut(s)	770, 797, 1139
AsuII	TTCGAA	1 cut(s)	594
AsuNHI	GCTAGC	2 cut(s)	34, 1291
AvaII	GGWCC	2 cut(s)	7, 320
BaeGI	GKGCMC	1 cut(s)	1066
BaeI	ACNNNNGTAYC	2 cut(s)	683, 716
BalI	TGGCCA	1 cut(s)	1586
BanI	GGYRCC	2 cut(s)	1003, 1061
BanII	GRGCYC	1 cut(s)	249
BbrPI	CACGTG	1 cut(s)	531
Bbv12I	GWGCWC	1 cut(s)	249
BbvI	GCAGC	6 cut(s)	268, 427, 1219, 1387, 1429, 1457
BciT130I	CCWGG	7 cut(s)	164, 560, 783, 1134, 1183, 1550, 1588
BclI	TGATCA	1 cut(s)	283
BcnI	CCSGG	1 cut(s)	208
BfaI	CTAG	4 cut(s)	35, 606, 1055, 1292
BfmI	CTRYAG	1 cut(s)	1443
BfoI	RGCGCY	2 cut(s)	35, 379
BfuAI	ACCTGC	1 cut(s)	505
BisI	GCNGC	7 cut(s)	254, 257, 416, 1233, 1376, 1443, 1446
BlsI	GCNGC	7 cut(s)	255, 258, 417, 1234, 1377, 1444, 1447
Bme1390I	CCNGG	8 cut(s)	164, 208, 560, 783, 1134, 1183, 1550, 1588
Bme18I	GGWCC	2 cut(s)	7, 320
BmgT120I	GGNCC	2 cut(s)	7, 320
BmiI	GGNNCC	4 cut(s)	78, 638, 1005, 1063
BmrFI	CCNGG	8 cut(s)	164, 208, 560, 783, 1134, 1183, 1550, 1588
BmsI	GCATC	6 cut(s)	55, 223, 348, 410, 501, 668
BmtI	GCTAGC	2 cut(s)	38, 1295
BpmI	CTGGAG	4 cut(s)	765, 1155, 1470, 1494
Bpu10I	CCTNAGC	2 cut(s)	653, 1395
Bpu14I	TTCGAA	1 cut(s)	594
BpuEI	CTTGAG	2 cut(s)	164, 1598
BpuMI	CCSGG	1 cut(s)	208
Bsa29I	ATCGAT	1 cut(s)	1317
BsaAI	YACGTR	3 cut(s)	531, 870, 1478
BsaBI	GATNNNNATC	3 cut(s)	282, 348, 1572
BsaHI	GRCGYC	1 cut(s)	21
BsaJI	CCNNGG	3 cut(s)	731, 1181, 1182
BsaWI	WCCGGW	3 cut(s)	322, 364, 1249
BsaXI	ACNNNNNCTCC	2 cut(s)	1272, 1302
Bsc4I	CCNNNNNNNGG	5 cut(s)	190, 830, 1071, 1460, 1631
Bse1I	ACTGG	2 cut(s)	835, 1204
Bse3DI	GCAATG	2 cut(s)	849, 1389
Bse8I	GATNNNNATC	3 cut(s)	282, 348, 1572
BseAI	TCCGGA	1 cut(s)	364
BseBI	CCWGG	7 cut(s)	164, 560, 783, 1134, 1183, 1550, 1588
BseCI	ATCGAT	1 cut(s)	1317
BseDI	CCNNGG	3 cut(s)	731, 1181, 1182
BseGI	GGATG	5 cut(s)	93, 340, 502, 1090, 1342
BseJI	GATNNNNATC	3 cut(s)	282, 348, 1572
BseLI	CCNNNNNNNGG	5 cut(s)	190, 830, 1071, 1460, 1631
BseMI	GCAATG	2 cut(s)	849, 1389
BseMII	CTCAG	3 cut(s)	199, 255, 667
BseNI	ACTGG	2 cut(s)	835, 1204
BseRI	GAGGAG	2 cut(s)	1116, 1293
BseSI	GKGCMC	1 cut(s)	1066
BseXI	GCAGC	6 cut(s)	268, 427, 1219, 1387, 1429, 1457
BseYI	CCCAGC	1 cut(s)	1400
Bsh1236I	CGCG	1 cut(s)	487
BshFI	GGCC	4 cut(s)	269, 686, 723, 1586
BshNI	GGYRCC	2 cut(s)	1003, 1061
BshVI	ATCGAT	1 cut(s)	1317
BsiHKAI	GWGCWC	1 cut(s)	249
BsiSI	CCGG	5 cut(s)	208, 323, 365, 1250, 1625
BslFI	GGGAC	1 cut(s)	986
BslI	CCNNNNNNNGG	5 cut(s)	190, 830, 1071, 1460, 1631
BsmFI	GGGAC	1 cut(s)	986
BsmI	GAATGC	3 cut(s)	545, 602, 1426
BsnI	GGCC	4 cut(s)	269, 686, 723, 1586
Bsp119I	TTCGAA	1 cut(s)	594
Bsp1286I	GDGCHC	2 cut(s)	249, 1066
Bsp13I	TCCGGA	1 cut(s)	364
Bsp1407I	TGTACA	1 cut(s)	525
BspACI	CCGC	5 cut(s)	68, 211, 254, 487, 543
BspANI	GGCC	4 cut(s)	269, 686, 723, 1586
BspCNI	CTCAG	3 cut(s)	198, 256, 666
BspDI	ATCGAT	1 cut(s)	1317
BspEI	TCCGGA	1 cut(s)	364
BspFNI	CGCG	1 cut(s)	487
BspHI	TCATGA	2 cut(s)	286, 1021
BspLI	GGNNCC	4 cut(s)	78, 638, 1005, 1063
BspMAI	CTGCAG	1 cut(s)	1447
BspMI	ACCTGC	1 cut(s)	505
BspOI	GCTAGC	2 cut(s)	38, 1295
BspPI	GGATC	5 cut(s)	338, 1124, 1241, 1540, 1560
BspT104I	TTCGAA	1 cut(s)	594
BspT107I	GGYRCC	2 cut(s)	1003, 1061
BsrDI	GCAATG	2 cut(s)	849, 1389
BsrGI	TGTACA	1 cut(s)	525
BsrI	ACTGG	2 cut(s)	835, 1204
BssECI	CCNNGG	3 cut(s)	731, 1181, 1182
BssNI	GRCGYC	1 cut(s)	21
Bst2UI	CCWGG	7 cut(s)	164, 560, 783, 1134, 1183, 1550, 1588
Bst4CI	ACNGT	2 cut(s)	745, 1384
Bst6I	CTCTTC	1 cut(s)	909
BstACI	GRCGYC	1 cut(s)	21
BstAPI	GCANNNNNTGC	1 cut(s)	1430
BstAUI	TGTACA	1 cut(s)	525
BstBAI	YACGTR	3 cut(s)	531, 870, 1478
BstBI	TTCGAA	1 cut(s)	594
BstC8I	GCNNGC	4 cut(s)	36, 849, 853, 1293
BstDEI	CTNAG	7 cut(s)	185, 264, 653, 856, 874, 926, 1395
BstF5I	GGATG	5 cut(s)	93, 340, 502, 1090, 1342
BstFNI	CGCG	1 cut(s)	487
BstH2I	RGCGCY	2 cut(s)	35, 379
BstHHI	GCGC	2 cut(s)	34, 378
BstMWI	GCNNNNNNNGC	7 cut(s)	29, 253, 511, 848, 1430, 1439, 1454
BstNI	CCWGG	7 cut(s)	164, 560, 783, 1134, 1183, 1550, 1588
BstNSI	RCATGY	1 cut(s)	713
BstSCI	CCNGG	8 cut(s)	162, 206, 558, 781, 1132, 1181, 1548, 1586
BstSFI	CTRYAG	1 cut(s)	1443
BstSLI	GKGCMC	1 cut(s)	1066
BstSNI	TACGTA	2 cut(s)	870, 1478
BstUI	CGCG	1 cut(s)	487
BstV1I	GCAGC	6 cut(s)	268, 427, 1219, 1387, 1429, 1457
BstX2I	RGATCY	1 cut(s)	1246
BstYI	RGATCY	1 cut(s)	1246
Bsu15I	ATCGAT	1 cut(s)	1317
BsuRI	GGCC	4 cut(s)	269, 686, 723, 1586
BsuTUI	ATCGAT	1 cut(s)	1317
BtsCI	GGATG	5 cut(s)	93, 340, 502, 1090, 1342
BtsIMutI	CAGTG	2 cut(s)	261, 828
BveI	ACCTGC	1 cut(s)	505
Cac8I	GCNNGC	4 cut(s)	36, 849, 853, 1293
CciI	TCATGA	2 cut(s)	286, 1021
CfoI	GCGC	2 cut(s)	34, 378
Cfr13I	GGNCC	2 cut(s)	7, 320
ClaI	ATCGAT	1 cut(s)	1317
CseI	GACGC	2 cut(s)	29, 493
Csp6I	GTAC	3 cut(s)	526, 871, 1350
CviAII	CATG	8 cut(s)	88, 250, 287, 710, 883, 1022, 1361, 1458
CviQI	GTAC	3 cut(s)	526, 871, 1350
DdeI	CTNAG	7 cut(s)	185, 264, 653, 856, 874, 926, 1395
DrdI	GACNNNNNNGTC	1 cut(s)	307
DseDI	GACNNNNNNGTC	1 cut(s)	307
EaeI	YGGCCR	1 cut(s)	1584
Eam1104I	CTCTTC	1 cut(s)	909
EarI	CTCTTC	1 cut(s)	909
Ecl136II	GAGCTC	1 cut(s)	247
Eco105I	TACGTA	2 cut(s)	870, 1478
Eco147I	AGGCCT	1 cut(s)	269
Eco24I	GRGCYC	1 cut(s)	249
Eco32I	GATATC	1 cut(s)	471
Eco47I	GGWCC	2 cut(s)	7, 320
Eco47III	AGCGCT	2 cut(s)	33, 377
Eco53kI	GAGCTC	1 cut(s)	247
Eco57I	CTGAAG	3 cut(s)	632, 736, 1100
Eco72I	CACGTG	1 cut(s)	531
EcoICRI	GAGCTC	1 cut(s)	247
EcoO109I	RGGNCCY	1 cut(s)	7
EcoRI	GAATTC	2 cut(s)	44, 179
EcoRII	CCWGG	7 cut(s)	162, 558, 781, 1132, 1181, 1548, 1586
EcoRV	GATATC	1 cut(s)	471
EcoT38I	GRGCYC	1 cut(s)	249
FaeI	CATG	8 cut(s)	91, 253, 290, 713, 886, 1025, 1364, 1461
FalI	AAGNNNNNCTT	4 cut(s)	365, 397, 388, 420
FaqI	GGGAC	1 cut(s)	986
FatI	CATG	8 cut(s)	87, 249, 286, 709, 882, 1021, 1360, 1457
FbaI	TGATCA	1 cut(s)	283
Fnu4HI	GCNGC	7 cut(s)	254, 257, 416, 1233, 1376, 1443, 1446
FokI	GGATG	5 cut(s)	80, 347, 509, 1097, 1349
FriOI	GRGCYC	1 cut(s)	249
Fsp4HI	GCNGC	7 cut(s)	254, 257, 416, 1233, 1376, 1443, 1446
FspBI	CTAG	4 cut(s)	35, 606, 1055, 1292
GlaI	GCGC	2 cut(s)	33, 377
GluI	GCNGC	7 cut(s)	254, 257, 416, 1233, 1376, 1443, 1446
GsaI	CCCAGC	1 cut(s)	1404
GsuI	CTGGAG	4 cut(s)	765, 1155, 1470, 1494
HaeII	RGCGCY	2 cut(s)	35, 379
HaeIII	GGCC	4 cut(s)	269, 686, 723, 1586
HapII	CCGG	5 cut(s)	208, 323, 365, 1250, 1625
HgaI	GACGC	2 cut(s)	29, 493
HhaI	GCGC	2 cut(s)	34, 378
Hin1I	GRCGYC	1 cut(s)	21
Hin1II	CATG	8 cut(s)	91, 253, 290, 713, 886, 1025, 1364, 1461
Hin6I	GCGC	2 cut(s)	32, 376
HinP1I	GCGC	2 cut(s)	32, 376
HinfI	GANTC	2 cut(s)	576, 1619
HpaII	CCGG	5 cut(s)	208, 323, 365, 1250, 1625
HphI	GGTGA	3 cut(s)	770, 797, 1139
Hpy166II	GTNNAC	6 cut(s)	391, 526, 528, 748, 761, 1606
Hpy188I	TCNGA	8 cut(s)	188, 313, 343, 354, 496, 735, 1227, 1242
Hpy8I	GTNNAC	6 cut(s)	391, 526, 528, 748, 761, 1606
Hpy99I	CGWCG	2 cut(s)	23, 176
HpyAV	CCTTC	5 cut(s)	34, 107, 1030, 1075, 1268
HpyCH4III	ACNGT	2 cut(s)	745, 1384
HpyCH4IV	ACGT	3 cut(s)	530, 869, 1477
HpyCH4V	TGCA	6 cut(s)	110, 514, 863, 1142, 1424, 1445
HpyF10VI	GCNNNNNNNGC	7 cut(s)	29, 253, 511, 848, 1430, 1439, 1454
HpyF3I	CTNAG	7 cut(s)	185, 264, 653, 856, 874, 926, 1395
HpySE526I	ACGT	3 cut(s)	530, 869, 1477
Hsp92I	GRCGYC	1 cut(s)	21
Hsp92II	CATG	8 cut(s)	91, 253, 290, 713, 886, 1025, 1364, 1461
HspAI	GCGC	2 cut(s)	32, 376
Kpn2I	TCCGGA	1 cut(s)	364
Ksp22I	TGATCA	1 cut(s)	283
LmnI	GCTCC	4 cut(s)	784, 1056, 1280, 1372
Lsp1109I	GCAGC	6 cut(s)	268, 427, 1219, 1387, 1429, 1457
LweI	GCATC	6 cut(s)	55, 223, 348, 410, 501, 668
MaeI	CTAG	4 cut(s)	35, 606, 1055, 1292
MaeII	ACGT	3 cut(s)	530, 869, 1477
MaeIII	GTNAC	5 cut(s)	193, 481, 565, 889, 1252
MflI	RGATCY	1 cut(s)	1246
MhlI	GDGCHC	2 cut(s)	249, 1066
MlsI	TGGCCA	1 cut(s)	1586
MluCI	AATT	9 cut(s)	44, 120, 157, 179, 797, 948, 1011, 1167, 1340
MluNI	TGGCCA	1 cut(s)	1586
MmeI	TCCRAC	1 cut(s)	78
Mox20I	TGGCCA	1 cut(s)	1586
MroI	TCCGGA	1 cut(s)	364
MroXI	GAANNNNTTC	2 cut(s)	44, 711
MscI	TGGCCA	1 cut(s)	1586
MseI	TTAA	6 cut(s)	156, 438, 501, 621, 1170, 1500
MslI	CAYNNNNRTG	1 cut(s)	296
Msp20I	TGGCCA	1 cut(s)	1586
MspA1I	CMGCKG	1 cut(s)	1490
MspI	CCGG	5 cut(s)	208, 323, 365, 1250, 1625
MspR9I	CCNGG	8 cut(s)	164, 208, 560, 783, 1134, 1183, 1550, 1588
Mva1269I	GAATGC	3 cut(s)	545, 602, 1426
MvaI	CCWGG	7 cut(s)	164, 560, 783, 1134, 1183, 1550, 1588
MvnI	CGCG	1 cut(s)	487
MwoI	GCNNNNNNNGC	7 cut(s)	29, 253, 511, 848, 1430, 1439, 1454
NciI	CCSGG	1 cut(s)	208
NheI	GCTAGC	2 cut(s)	34, 1291
NlaIII	CATG	8 cut(s)	91, 253, 290, 713, 886, 1025, 1364, 1461
NlaIV	GGNNCC	4 cut(s)	78, 638, 1005, 1063
NmuCI	GTSAC	2 cut(s)	481, 1252
NspI	RCATGY	1 cut(s)	713
NspV	TTCGAA	1 cut(s)	594
PagI	TCATGA	2 cut(s)	286, 1021
PasI	CCCWGGG	1 cut(s)	1182
PceI	AGGCCT	1 cut(s)	269
PciI	ACATGT	1 cut(s)	709
PctI	GAATGC	3 cut(s)	545, 602, 1426
PdmI	GAANNNNTTC	2 cut(s)	44, 711
PfeI	GAWTC	2 cut(s)	576, 1619
PflMI	CCANNNNNTGG	1 cut(s)	830
PfoI	TCCNGGA	2 cut(s)	1132, 1548
PkrI	GCNGC	7 cut(s)	255, 258, 417, 1234, 1377, 1444, 1447
PmaCI	CACGTG	1 cut(s)	531
PmlI	CACGTG	1 cut(s)	531
Ppu21I	YACGTR	3 cut(s)	531, 870, 1478
PpuMI	RGGWCCY	1 cut(s)	7
PscI	ACATGT	1 cut(s)	709
PshBI	ATTAAT	2 cut(s)	1170, 1500
Psp124BI	GAGCTC	1 cut(s)	249
Psp5II	RGGWCCY	1 cut(s)	7
Psp6I	CCWGG	7 cut(s)	162, 558, 781, 1132, 1181, 1548, 1586
PspCI	CACGTG	1 cut(s)	531
PspFI	CCCAGC	1 cut(s)	1400
PspGI	CCWGG	7 cut(s)	162, 558, 781, 1132, 1181, 1548, 1586
PspN4I	GGNNCC	4 cut(s)	78, 638, 1005, 1063
PspPI	GGNCC	2 cut(s)	7, 320
PspPPI	RGGWCCY	1 cut(s)	7
PstI	CTGCAG	1 cut(s)	1447
PsuI	RGATCY	1 cut(s)	1246
PvuII	CAGCTG	1 cut(s)	1490
RsaI	GTAC	3 cut(s)	527, 872, 1351
RsaNI	GTAC	3 cut(s)	526, 871, 1350
RseI	CAYNNNNRTG	1 cut(s)	296
SacI	GAGCTC	1 cut(s)	249
SaqAI	TTAA	6 cut(s)	156, 438, 501, 621, 1170, 1500
SatI	GCNGC	7 cut(s)	254, 257, 416, 1233, 1376, 1443, 1446
Sau96I	GGNCC	2 cut(s)	7, 320
ScrFI	CCNGG	8 cut(s)	164, 208, 560, 783, 1134, 1183, 1550, 1588
SduI	GDGCHC	2 cut(s)	249, 1066
SfaNI	GCATC	6 cut(s)	55, 223, 348, 410, 501, 668
SfcI	CTRYAG	1 cut(s)	1443
SfuI	TTCGAA	1 cut(s)	594
SinI	GGWCC	2 cut(s)	7, 320
SmiMI	CAYNNNNRTG	1 cut(s)	296
SmlI	CTYRAG	2 cut(s)	143, 1577
SmoI	CTYRAG	2 cut(s)	143, 1577
SnaBI	TACGTA	2 cut(s)	870, 1478
Sse9I	AATT	9 cut(s)	44, 120, 157, 179, 797, 948, 1011, 1167, 1340
SseBI	AGGCCT	1 cut(s)	269
SsiI	CCGC	5 cut(s)	68, 211, 254, 487, 543
SspI	AATATT	1 cut(s)	619
SspMI	CTAG	4 cut(s)	35, 606, 1055, 1292
SstI	GAGCTC	1 cut(s)	249
StuI	AGGCCT	1 cut(s)	269
StyD4I	CCNGG	8 cut(s)	162, 206, 558, 781, 1132, 1181, 1548, 1586
TaaI	ACNGT	2 cut(s)	745, 1384
TaiI	ACGT	3 cut(s)	533, 872, 1480
TaqI	TCGA	6 cut(s)	18, 171, 574, 594, 1317, 1555
TasI	AATT	9 cut(s)	44, 120, 157, 179, 797, 948, 1011, 1167, 1340
TatI	WGTACW	1 cut(s)	525
TauI	GCSGC	1 cut(s)	256
TfiI	GAWTC	2 cut(s)	576, 1619
Tru1I	TTAA	6 cut(s)	156, 438, 501, 621, 1170, 1500
Tru9I	TTAA	6 cut(s)	156, 438, 501, 621, 1170, 1500
TscAI	CASTG	2 cut(s)	268, 835
TseFI	GTSAC	2 cut(s)	481, 1252
TseI	GCWGC	6 cut(s)	256, 415, 1232, 1375, 1442, 1445
Tsp45I	GTSAC	2 cut(s)	481, 1252
TspRI	CASTG	2 cut(s)	268, 835
Van91I	CCANNNNNTGG	1 cut(s)	830
VpaK11BI	GGWCC	2 cut(s)	7, 320
VspI	ATTAAT	2 cut(s)	1170, 1500
XapI	RAATTY	4 cut(s)	44, 120, 179, 1011
XceI	RCATGY	1 cut(s)	713
XmnI	GAANNNNTTC	2 cut(s)	44, 711
XspI	CTAG	4 cut(s)	35, 606, 1055, 1292

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.