No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G08880 AT5G01570 AT5G01570 AT5G01570 AT5G01570 AT5G01570 |
| fragaria_vesca | FvH4_6g10920 FvH4_6g10921 |
| malus_domestica | MD04G1163700.v1.1 MD12G1177600.v1.1 |
| prunus_persica | Prupe.6G283000_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr3g0462171 RchiOBHm_Chr3g0462181 |
| rosa_laevigata | RLG00000024879 |
| rosa_multiflora | Rmu_sc0006715.1_g000004 Rmu_sc0007627.1_g000007 Rmu_sc0007627.1_g000008 |
| rosa_roxburghii | Rroxscaffold_6G00417700 |
| rosa_rugosa | Rorug03G0054800 |
| rosa_samantha | Rh3AG113500 Rh3AG113600 Rh3BG116300 Rh3BG116400 Rh3CG119300 Rh3CG119400 Rh3DG118200 |
| rosa_wichuraiana | Rw3G009580 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfaI | GTAC | 1 cut(s) | 189 |
| AgsI | TTSAA | 3 cut(s) | 55, 79, 200 |
| AluBI | AGCT | 2 cut(s) | 94, 243 |
| AluI | AGCT | 2 cut(s) | 94, 243 |
| ApeKI | GCWGC | 1 cut(s) | 26 |
| BbvI | GCAGC | 1 cut(s) | 13 |
| BceAI | ACGGC | 1 cut(s) | 170 |
| BfmI | CTRYAG | 1 cut(s) | 27 |
| BisI | GCNGC | 1 cut(s) | 27 |
| BlsI | GCNGC | 1 cut(s) | 28 |
| BseGI | GGATG | 2 cut(s) | 10, 76 |
| BseMII | CTCAG | 1 cut(s) | 98 |
| BseXI | GCAGC | 1 cut(s) | 13 |
| Bsp143I | GATC | 1 cut(s) | 139 |
| BspCNI | CTCAG | 1 cut(s) | 97 |
| BspMAI | CTGCAG | 1 cut(s) | 31 |
| BssMI | GATC | 1 cut(s) | 139 |
| BstDEI | CTNAG | 1 cut(s) | 84 |
| BstF5I | GGATG | 2 cut(s) | 10, 76 |
| BstKTI | GATC | 1 cut(s) | 142 |
| BstMBI | GATC | 1 cut(s) | 139 |
| BstNSI | RCATGY | 1 cut(s) | 237 |
| BstSFI | CTRYAG | 1 cut(s) | 27 |
| BstV1I | GCAGC | 1 cut(s) | 13 |
| BtsCI | GGATG | 2 cut(s) | 10, 76 |
| Csp6I | GTAC | 1 cut(s) | 188 |
| CviAII | CATG | 4 cut(s) | 100, 154, 234, 264 |
| CviJI | RGCY | 6 cut(s) | 26, 83, 94, 159, 185, 243 |
| CviKI_1 | RGCY | 6 cut(s) | 26, 83, 94, 159, 185, 243 |
| CviQI | GTAC | 1 cut(s) | 188 |
| DdeI | CTNAG | 1 cut(s) | 84 |
| DpnI | GATC | 1 cut(s) | 141 |
| DpnII | GATC | 1 cut(s) | 139 |
| FaeI | CATG | 4 cut(s) | 103, 157, 237, 267 |
| FaiI | YATR | 9 cut(s) | 101, 105, 125, 155, 162, 228, 235, 247, 265 |
| FatI | CATG | 4 cut(s) | 99, 153, 233, 263 |
| Fnu4HI | GCNGC | 1 cut(s) | 27 |
| FokI | GGATG | 2 cut(s) | 17, 83 |
| Fsp4HI | GCNGC | 1 cut(s) | 27 |
| GluI | GCNGC | 1 cut(s) | 27 |
| Hin1II | CATG | 4 cut(s) | 103, 157, 237, 267 |
| HindIII | AAGCTT | 1 cut(s) | 92 |
| HinfI | GANTC | 1 cut(s) | 150 |
| Hpy188I | TCNGA | 1 cut(s) | 87 |
| Hpy188III | TCNNGA | 1 cut(s) | 147 |
| HpyCH4V | TGCA | 2 cut(s) | 29, 237 |
| HpyF3I | CTNAG | 1 cut(s) | 84 |
| Hsp92II | CATG | 4 cut(s) | 103, 157, 237, 267 |
| Kzo9I | GATC | 1 cut(s) | 139 |
| LpnPI | CCDG | 1 cut(s) | 53 |
| Lsp1109I | GCAGC | 1 cut(s) | 13 |
| MaeIII | GTNAC | 1 cut(s) | 112 |
| MalI | GATC | 1 cut(s) | 141 |
| MboI | GATC | 1 cut(s) | 139 |
| MboII | GAAGA | 3 cut(s) | 55, 67, 262 |
| MluCI | AATT | 1 cut(s) | 201 |
| MnlI | CCTC | 2 cut(s) | 81, 143 |
| NdeII | GATC | 1 cut(s) | 139 |
| NlaIII | CATG | 4 cut(s) | 103, 157, 237, 267 |
| NspI | RCATGY | 1 cut(s) | 237 |
| PfeI | GAWTC | 1 cut(s) | 150 |
| PkrI | GCNGC | 1 cut(s) | 28 |
| PstI | CTGCAG | 1 cut(s) | 31 |
| RsaI | GTAC | 1 cut(s) | 189 |
| RsaNI | GTAC | 1 cut(s) | 188 |
| SatI | GCNGC | 1 cut(s) | 27 |
| Sau3AI | GATC | 1 cut(s) | 139 |
| SetI | ASST | 3 cut(s) | 96, 135, 245 |
| SfcI | CTRYAG | 1 cut(s) | 27 |
| SgeI | CNNG | 7 cut(s) | 80, 91, 112, 146, 159, 166, 246 |
| Sse9I | AATT | 1 cut(s) | 201 |
| TaqI | TCGA | 1 cut(s) | 135 |
| TaqII | GACCGA | 1 cut(s) | 132 |
| TasI | AATT | 1 cut(s) | 201 |
| TfiI | GAWTC | 1 cut(s) | 150 |
| TseI | GCWGC | 1 cut(s) | 26 |
| TspDTI | ATGAA | 1 cut(s) | 243 |
| XceI | RCATGY | 1 cut(s) | 237 |