No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G08880 AT5G01570 AT5G01570 AT5G01570 AT5G01570 AT5G01570 |
| fragaria_vesca | FvH4_6g10920 FvH4_6g10921 |
| malus_domestica | MD04G1163700.v1.1 MD12G1177600.v1.1 |
| prunus_persica | Prupe.6G283000_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr3g0462171 RchiOBHm_Chr3g0462181 |
| rosa_laevigata | RLG00000024879 |
| rosa_multiflora | Rmu_sc0006715.1_g000004 Rmu_sc0007627.1_g000007 Rmu_sc0007627.1_g000008 |
| rosa_roxburghii | Rroxscaffold_6G00417700 |
| rosa_rugosa | Rorug03G0054800 |
| rosa_samantha | Rh3AG113500 Rh3AG113600 Rh3BG116300 Rh3BG116400 Rh3CG119300 Rh3CG119400 Rh3DG118200 |
| rosa_wichuraiana | Rw3G009580 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 241 |
| AccII | CGCG | 1 cut(s) | 254 |
| AciI | CCGC | 5 cut(s) | 309, 312, 321, 324, 360 |
| AclWI | GGATC | 1 cut(s) | 294 |
| AcsI | RAATTY | 1 cut(s) | 178 |
| AgsI | TTSAA | 6 cut(s) | 19, 92, 183, 214, 299, 625 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 31, 63 |
| AluBI | AGCT | 1 cut(s) | 268 |
| AluI | AGCT | 1 cut(s) | 268 |
| AlwI | GGATC | 1 cut(s) | 294 |
| AoxI | GGCC | 1 cut(s) | 632 |
| ApoI | RAATTY | 1 cut(s) | 178 |
| AsuHPI | GGTGA | 3 cut(s) | 140, 445, 622 |
| BaeGI | GKGCMC | 1 cut(s) | 246 |
| BanI | GGYRCC | 1 cut(s) | 241 |
| BbvCI | CCTCAGC | 1 cut(s) | 276 |
| BccI | CCATC | 2 cut(s) | 311, 365 |
| BceAI | ACGGC | 2 cut(s) | 213, 265 |
| BglII | AGATCT | 1 cut(s) | 113 |
| BisI | GCNGC | 2 cut(s) | 310, 322 |
| BlsI | GCNGC | 2 cut(s) | 311, 323 |
| BmiI | GGNNCC | 1 cut(s) | 243 |
| Bpu10I | CCTNAGC | 1 cut(s) | 276 |
| BpuEI | CTTGAG | 1 cut(s) | 248 |
| Bse3DI | GCAATG | 2 cut(s) | 66, 484 |
| BseGI | GGATG | 1 cut(s) | 33 |
| BseMI | GCAATG | 2 cut(s) | 66, 484 |
| BseMII | CTCAG | 1 cut(s) | 290 |
| BseRI | GAGGAG | 1 cut(s) | 342 |
| BseSI | GKGCMC | 1 cut(s) | 246 |
| Bsh1236I | CGCG | 1 cut(s) | 254 |
| BshFI | GGCC | 1 cut(s) | 634 |
| BshNI | GGYRCC | 1 cut(s) | 241 |
| BsnI | GGCC | 1 cut(s) | 634 |
| Bsp1286I | GDGCHC | 1 cut(s) | 246 |
| Bsp143I | GATC | 2 cut(s) | 113, 286 |
| BspACI | CCGC | 5 cut(s) | 309, 312, 321, 324, 360 |
| BspANI | GGCC | 1 cut(s) | 634 |
| BspCNI | CTCAG | 1 cut(s) | 289 |
| BspFNI | CGCG | 1 cut(s) | 254 |
| BspLI | GGNNCC | 1 cut(s) | 243 |
| BspPI | GGATC | 1 cut(s) | 294 |
| BspQI | GCTCTTC | 1 cut(s) | 682 |
| BspT107I | GGYRCC | 1 cut(s) | 241 |
| BsrDI | GCAATG | 2 cut(s) | 66, 484 |
| BssMI | GATC | 2 cut(s) | 113, 286 |
| Bst4CI | ACNGT | 1 cut(s) | 100 |
| Bst6I | CTCTTC | 5 cut(s) | 52, 185, 386, 536, 682 |
| BstDEI | CTNAG | 1 cut(s) | 276 |
| BstF5I | GGATG | 1 cut(s) | 33 |
| BstFNI | CGCG | 1 cut(s) | 254 |
| BstKTI | GATC | 2 cut(s) | 116, 289 |
| BstMBI | GATC | 2 cut(s) | 113, 286 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 318 |
| BstNSI | RCATGY | 1 cut(s) | 650 |
| BstSLI | GKGCMC | 1 cut(s) | 246 |
| BstUI | CGCG | 1 cut(s) | 254 |
| BstX2I | RGATCY | 2 cut(s) | 113, 286 |
| BstYI | RGATCY | 2 cut(s) | 113, 286 |
| BsuRI | GGCC | 1 cut(s) | 634 |
| BtsCI | GGATG | 1 cut(s) | 33 |
| CseI | GACGC | 1 cut(s) | 243 |
| CviAII | CATG | 1 cut(s) | 647 |
| CviJI | RGCY | 3 cut(s) | 268, 280, 634 |
| CviKI_1 | RGCY | 3 cut(s) | 268, 280, 634 |
| DdeI | CTNAG | 1 cut(s) | 276 |
| DpnI | GATC | 2 cut(s) | 115, 288 |
| DpnII | GATC | 2 cut(s) | 113, 286 |
| Eam1104I | CTCTTC | 5 cut(s) | 52, 185, 386, 536, 682 |
| EarI | CTCTTC | 5 cut(s) | 52, 185, 386, 536, 682 |
| EciI | GGCGGA | 3 cut(s) | 327, 339, 375 |
| Eco147I | AGGCCT | 1 cut(s) | 634 |
| FaeI | CATG | 1 cut(s) | 650 |
| FaiI | YATR | 4 cut(s) | 59, 423, 638, 648 |
| FatI | CATG | 1 cut(s) | 646 |
| Fnu4HI | GCNGC | 2 cut(s) | 310, 322 |
| FokI | GGATG | 1 cut(s) | 20 |
| Fsp4HI | GCNGC | 2 cut(s) | 310, 322 |
| GluI | GCNGC | 2 cut(s) | 310, 322 |
| HaeIII | GGCC | 1 cut(s) | 634 |
| HgaI | GACGC | 1 cut(s) | 243 |
| Hin1II | CATG | 1 cut(s) | 650 |
| HinfI | GANTC | 1 cut(s) | 225 |
| HphI | GGTGA | 3 cut(s) | 140, 445, 622 |
| Hpy188I | TCNGA | 2 cut(s) | 236, 380 |
| Hpy188III | TCNNGA | 1 cut(s) | 296 |
| Hpy99I | CGWCG | 1 cut(s) | 259 |
| HpyAV | CCTTC | 3 cut(s) | 20, 40, 340 |
| HpyCH4III | ACNGT | 1 cut(s) | 100 |
| HpyCH4V | TGCA | 3 cut(s) | 4, 107, 220 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 318 |
| HpyF3I | CTNAG | 1 cut(s) | 276 |
| Hsp92II | CATG | 1 cut(s) | 650 |
| Kzo9I | GATC | 2 cut(s) | 113, 286 |
| LguI | GCTCTTC | 1 cut(s) | 682 |
| LmnI | GCTCC | 3 cut(s) | 237, 506, 643 |
| LpnPI | CCDG | 5 cut(s) | 170, 176, 275, 320, 573 |
| MaeIII | GTNAC | 2 cut(s) | 433, 649 |
| MalI | GATC | 2 cut(s) | 115, 288 |
| MboI | GATC | 2 cut(s) | 113, 286 |
| MfeI | CAATTG | 1 cut(s) | 510 |
| MflI | RGATCY | 2 cut(s) | 113, 286 |
| MhlI | GDGCHC | 1 cut(s) | 246 |
| MluCI | AATT | 7 cut(s) | 82, 178, 215, 398, 510, 605, 613 |
| MmeI | TCCRAC | 1 cut(s) | 264 |
| MnlI | CCTC | 8 cut(s) | 55, 272, 285, 320, 323, 356, 387, 539 |
| MseI | TTAA | 2 cut(s) | 126, 594 |
| MunI | CAATTG | 1 cut(s) | 510 |
| MvnI | CGCG | 1 cut(s) | 254 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 318 |
| NdeII | GATC | 2 cut(s) | 113, 286 |
| NlaIII | CATG | 1 cut(s) | 650 |
| NlaIV | GGNNCC | 1 cut(s) | 243 |
| NmuCI | GTSAC | 2 cut(s) | 433, 649 |
| NspI | RCATGY | 1 cut(s) | 650 |
| PceI | AGGCCT | 1 cut(s) | 634 |
| PciSI | GCTCTTC | 1 cut(s) | 682 |
| PfeI | GAWTC | 1 cut(s) | 225 |
| PkrI | GCNGC | 2 cut(s) | 311, 323 |
| PspN4I | GGNNCC | 1 cut(s) | 243 |
| PsuI | RGATCY | 2 cut(s) | 113, 286 |
| SapI | GCTCTTC | 1 cut(s) | 682 |
| SaqAI | TTAA | 2 cut(s) | 126, 594 |
| SatI | GCNGC | 2 cut(s) | 310, 322 |
| Sau3AI | GATC | 2 cut(s) | 113, 286 |
| SduI | GDGCHC | 1 cut(s) | 246 |
| SetI | ASST | 4 cut(s) | 264, 270, 334, 550 |
| SmlI | CTYRAG | 1 cut(s) | 263 |
| SmoI | CTYRAG | 1 cut(s) | 263 |
| Sse9I | AATT | 7 cut(s) | 82, 178, 215, 398, 510, 605, 613 |
| SseBI | AGGCCT | 1 cut(s) | 634 |
| SsiI | CCGC | 5 cut(s) | 309, 312, 321, 324, 360 |
| StuI | AGGCCT | 1 cut(s) | 634 |
| TaaI | ACNGT | 1 cut(s) | 100 |
| TaqI | TCGA | 1 cut(s) | 257 |
| TasI | AATT | 7 cut(s) | 82, 178, 215, 398, 510, 605, 613 |
| TauI | GCSGC | 2 cut(s) | 312, 324 |
| TfiI | GAWTC | 1 cut(s) | 225 |
| Tru1I | TTAA | 2 cut(s) | 126, 594 |
| Tru9I | TTAA | 2 cut(s) | 126, 594 |
| TseFI | GTSAC | 2 cut(s) | 433, 649 |
| Tsp45I | GTSAC | 2 cut(s) | 433, 649 |
| TspDTI | ATGAA | 3 cut(s) | 22, 46, 518 |
| XapI | RAATTY | 1 cut(s) | 178 |
| XceI | RCATGY | 1 cut(s) | 650 |