No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G08880 AT5G01570 AT5G01570 AT5G01570 AT5G01570 AT5G01570 |
| fragaria_vesca | FvH4_6g10920 FvH4_6g10921 |
| malus_domestica | MD04G1163700.v1.1 MD12G1177600.v1.1 |
| prunus_persica | Prupe.6G283000_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr3g0462171 RchiOBHm_Chr3g0462181 |
| rosa_laevigata | RLG00000024879 |
| rosa_multiflora | Rmu_sc0006715.1_g000004 Rmu_sc0007627.1_g000007 Rmu_sc0007627.1_g000008 |
| rosa_roxburghii | Rroxscaffold_6G00417700 |
| rosa_rugosa | Rorug03G0054800 |
| rosa_samantha | Rh3AG113500 Rh3AG113600 Rh3BG116300 Rh3BG116400 Rh3CG119300 Rh3CG119400 Rh3DG118200 |
| rosa_wichuraiana | Rw3G009580 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 132 |
| AciI | CCGC | 6 cut(s) | 5, 64, 130, 236, 314, 470 |
| AcuI | CTGAAG | 1 cut(s) | 248 |
| AfaI | GTAC | 1 cut(s) | 474 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 64 |
| AflIII | ACRYGT | 1 cut(s) | 518 |
| AgsI | TTSAA | 3 cut(s) | 73, 340, 485 |
| AjnI | CCWGG | 1 cut(s) | 417 |
| AluBI | AGCT | 3 cut(s) | 161, 259, 379 |
| AluI | AGCT | 3 cut(s) | 161, 259, 379 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 37 |
| AoxI | GGCC | 1 cut(s) | 301 |
| AspLEI | GCGC | 1 cut(s) | 370 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 221, 255 |
| BciT130I | CCWGG | 1 cut(s) | 419 |
| BclI | TGATCA | 1 cut(s) | 424 |
| Bme1390I | CCNGG | 1 cut(s) | 419 |
| BmrFI | CCNGG | 1 cut(s) | 419 |
| BmsI | GCATC | 2 cut(s) | 187, 481 |
| BsaJI | CCNNGG | 2 cut(s) | 216, 231 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 64 |
| Bse1I | ACTGG | 1 cut(s) | 31 |
| BseBI | CCWGG | 1 cut(s) | 419 |
| BseDI | CCNNGG | 2 cut(s) | 216, 231 |
| BseGI | GGATG | 5 cut(s) | 27, 283, 295, 361, 427 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 64 |
| BseNI | ACTGG | 1 cut(s) | 31 |
| BseRI | GAGGAG | 3 cut(s) | 124, 127, 233 |
| BshFI | GGCC | 1 cut(s) | 303 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 64 |
| BsnI | GGCC | 1 cut(s) | 303 |
| Bsp143I | GATC | 2 cut(s) | 39, 424 |
| BspACI | CCGC | 6 cut(s) | 5, 64, 130, 236, 314, 470 |
| BspANI | GGCC | 1 cut(s) | 303 |
| BsrBI | CCGCTC | 1 cut(s) | 132 |
| BsrI | ACTGG | 1 cut(s) | 31 |
| BssECI | CCNNGG | 2 cut(s) | 216, 231 |
| BssMI | GATC | 2 cut(s) | 39, 424 |
| Bst2UI | CCWGG | 1 cut(s) | 419 |
| BstC8I | GCNNGC | 1 cut(s) | 202 |
| BstF5I | GGATG | 5 cut(s) | 27, 283, 295, 361, 427 |
| BstHHI | GCGC | 1 cut(s) | 370 |
| BstKTI | GATC | 2 cut(s) | 42, 427 |
| BstMBI | GATC | 2 cut(s) | 39, 424 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 376 |
| BstNI | CCWGG | 1 cut(s) | 419 |
| BstNSI | RCATGY | 1 cut(s) | 522 |
| BstSCI | CCNGG | 1 cut(s) | 417 |
| BsuRI | GGCC | 1 cut(s) | 303 |
| BtsCI | GGATG | 5 cut(s) | 27, 283, 295, 361, 427 |
| BtsI | GCAGTG | 1 cut(s) | 103 |
| BtsIMutI | CAGTG | 2 cut(s) | 38, 103 |
| Cac8I | GCNNGC | 1 cut(s) | 202 |
| CaiI | CAGNNNCTG | 1 cut(s) | 37 |
| CfoI | GCGC | 1 cut(s) | 370 |
| CseI | GACGC | 1 cut(s) | 17 |
| Csp6I | GTAC | 1 cut(s) | 473 |
| CviAII | CATG | 5 cut(s) | 286, 385, 439, 519, 549 |
| CviJI | RGCY | 7 cut(s) | 37, 125, 161, 259, 303, 379, 444 |
| CviKI_1 | RGCY | 7 cut(s) | 37, 125, 161, 259, 303, 379, 444 |
| CviQI | GTAC | 1 cut(s) | 473 |
| DpnI | GATC | 2 cut(s) | 41, 426 |
| DpnII | GATC | 2 cut(s) | 39, 424 |
| EciI | GGCGGA | 1 cut(s) | 20 |
| Eco57I | CTGAAG | 1 cut(s) | 248 |
| EcoRII | CCWGG | 1 cut(s) | 417 |
| FaeI | CATG | 5 cut(s) | 289, 388, 442, 522, 552 |
| FatI | CATG | 5 cut(s) | 285, 384, 438, 518, 548 |
| FauI | CCCGC | 1 cut(s) | 57 |
| FbaI | TGATCA | 1 cut(s) | 424 |
| FokI | GGATG | 5 cut(s) | 14, 290, 302, 368, 434 |
| GlaI | GCGC | 1 cut(s) | 369 |
| HaeIII | GGCC | 1 cut(s) | 303 |
| HgaI | GACGC | 1 cut(s) | 17 |
| HhaI | GCGC | 1 cut(s) | 370 |
| Hin1II | CATG | 5 cut(s) | 289, 388, 442, 522, 552 |
| Hin6I | GCGC | 1 cut(s) | 368 |
| HinP1I | GCGC | 1 cut(s) | 368 |
| HindIII | AAGCTT | 1 cut(s) | 377 |
| HinfI | GANTC | 2 cut(s) | 143, 435 |
| Hpy188I | TCNGA | 4 cut(s) | 142, 148, 176, 267 |
| Hpy188III | TCNNGA | 3 cut(s) | 15, 70, 432 |
| Hpy99I | CGWCG | 1 cut(s) | 56 |
| HpyAV | CCTTC | 2 cut(s) | 67, 293 |
| HpyCH4V | TGCA | 2 cut(s) | 204, 494 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 376 |
| Hsp92II | CATG | 5 cut(s) | 289, 388, 442, 522, 552 |
| HspAI | GCGC | 1 cut(s) | 368 |
| Ksp22I | TGATCA | 1 cut(s) | 424 |
| Kzo9I | GATC | 2 cut(s) | 39, 424 |
| LmnI | GCTCC | 3 cut(s) | 137, 177, 256 |
| LpnPI | CCDG | 5 cut(s) | 44, 338, 349, 404, 431 |
| LweI | GCATC | 2 cut(s) | 187, 481 |
| MaeIII | GTNAC | 1 cut(s) | 397 |
| MalI | GATC | 2 cut(s) | 41, 426 |
| MbiI | CCGCTC | 1 cut(s) | 132 |
| MboI | GATC | 2 cut(s) | 39, 424 |
| MboII | GAAGA | 7 cut(s) | 199, 220, 254, 340, 352, 511, 547 |
| MluCI | AATT | 3 cut(s) | 251, 272, 486 |
| MlyI | GAGTC | 1 cut(s) | 444 |
| MmeI | TCCRAC | 1 cut(s) | 69 |
| MspR9I | CCNGG | 1 cut(s) | 419 |
| MvaI | CCWGG | 1 cut(s) | 419 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 376 |
| NdeII | GATC | 2 cut(s) | 39, 424 |
| NlaIII | CATG | 5 cut(s) | 289, 388, 442, 522, 552 |
| NspI | RCATGY | 1 cut(s) | 522 |
| PciI | ACATGT | 1 cut(s) | 518 |
| PfeI | GAWTC | 1 cut(s) | 143 |
| PleI | GAGTC | 1 cut(s) | 443 |
| PpsI | GAGTC | 1 cut(s) | 443 |
| PscI | ACATGT | 1 cut(s) | 518 |
| Psp6I | CCWGG | 1 cut(s) | 417 |
| PspGI | CCWGG | 1 cut(s) | 417 |
| PstNI | CAGNNNCTG | 1 cut(s) | 37 |
| RsaI | GTAC | 1 cut(s) | 474 |
| RsaNI | GTAC | 1 cut(s) | 473 |
| Sau3AI | GATC | 2 cut(s) | 39, 424 |
| SchI | GAGTC | 1 cut(s) | 444 |
| ScrFI | CCNGG | 1 cut(s) | 419 |
| SetI | ASST | 6 cut(s) | 60, 90, 163, 261, 381, 420 |
| SfaNI | GCATC | 2 cut(s) | 187, 481 |
| Sse9I | AATT | 3 cut(s) | 251, 272, 486 |
| SsiI | CCGC | 6 cut(s) | 5, 64, 130, 236, 314, 470 |
| StyD4I | CCNGG | 1 cut(s) | 417 |
| TaqI | TCGA | 1 cut(s) | 24 |
| TasI | AATT | 3 cut(s) | 251, 272, 486 |
| TfiI | GAWTC | 1 cut(s) | 143 |
| TscAI | CASTG | 2 cut(s) | 38, 110 |
| TspDTI | ATGAA | 1 cut(s) | 528 |
| TspRI | CASTG | 2 cut(s) | 38, 110 |
| XceI | RCATGY | 1 cut(s) | 522 |