FvH4_6g21530

Histone-lysine N-methyltransferase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Forward (+)
15114768 .. 15118934
4167 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g21530.t2

Sequence Viewer

Length: 1089 bp
ATGCTATGTGCTGACATGAGACGTGGTGACATCCAATCATTTCAATCTCATGAGCTCAGTATAATACATCTTCATAATAATGTAGCGAAATATTCTACAAGATTCAAAATGGCGCGTGTCGCAGTCCGTTGCAGTCGTTGGGCTCCGCGCTTCCTACCTTCCATTTCCAAAAACGAGCCGTTTCTCTCTTCCACCTTCTCCACCGCACCGGAAAATGCGAACCCGGGTCGACCCGGACCGCCTCCGATCCGGGTCGCGCTCACCGAGTCATCCGGGCGAGGCGTATTCGCGACCCGGAAAATCGAGACCGGTGAGCTCTTGCACACCGCCAAACCCATTCTGACTCACCCTTCTCTTTCCTCCCTCCACACCGTCTGCTACTTCTGCCTCCGAAAGCTCAGAACCGCCGACGCCTCTCAACCCCAAAGCGTTTCCTATTGCAGTCAGGAGTGTCAGCAACAAGCTCAGGGATTTCATGATATTGAGATGACAGCAGATTGGTCAGCTTACGATAACTATTGCCGGTCCAATGGTTTGAAATATCCACTACTTGTAAAGCGGTTGGCTTGTATGGTCATGTCAGGAGCTGCACATGCCAACCTTCTAGTCATACTCCAACCTGCTAGCTTAACTCCGGAGATGATATCTGAGATGGAAGAGGGGTTTGGCTTGCTAAGGAATGCCTTCATAAACTCAAATATCATGGGTGAACAGATGTCTTTCTTGACTAAACAATGGTACATCGGCATACTTGCACGGATTCGTATTAATGCATTTCGTATTGAGTTGGCTGGGGGATACAATGACCTCTTGTCATCATTAGCAGCCTCTATAGAAGCTGAAGCAGCTGTTGGGAATGCTGTTTATATGCTTCCATCCTTTTATAATCATGATTGTGATCCAAATGCCCACATCATATGGATAGAGAATTCAGATGCTAGATTGAAGGCCCTTCGTGATGTGGATGAAGGGGAAGAGCTCCGGATCTGCTACATCGATGCAAGTATGGATCATGATGCTCGGCAGAGTTTCCTGTCGCAAGGGTTTGGTTTCCGGTGCAATTGTCCCCGGTGTTTGTCTGGTGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

363

Amino Acids

40.38

Weight (kDa)

6.82

Isoelectric Point (pI)

60.12

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 885
Acc36I ACCTGC 1 cut(s) 628
AccI GTMKAC 1 cut(s) 229
AccII CGCG 4 cut(s) 115, 148, 257, 290
AccIII TCCGGA 2 cut(s) 634, 981
AciI CCGC 6 cut(s) 146, 204, 239, 327, 405, 559
AclWI GGATC 4 cut(s) 241, 893, 992, 1017
AcsI RAATTY 1 cut(s) 928
AcuI CTGAAG 1 cut(s) 861
AcyI GRCGYC 1 cut(s) 411
AfaI GTAC 1 cut(s) 740
AgeI ACCGGT 1 cut(s) 308
AgsI TTSAA 4 cut(s) 44, 106, 538, 946
AhdI GACNNNNNGTC 1 cut(s) 811
AjiI CACGTC 1 cut(s) 23
AjuI GAANNNNNNNTTGG 4 cut(s) 648, 680, 834, 866
Alw21I GWGCWC 3 cut(s) 57, 318, 981
Alw26I GTCTC 2 cut(s) 13, 299
AlwI GGATC 4 cut(s) 241, 893, 992, 1017
AlwNI CAGNNNCTG 1 cut(s) 587
Ama87I CYCGRG 1 cut(s) 223
Aor13HI TCCGGA 2 cut(s) 634, 981
AoxI GGCC 1 cut(s) 948
ApeKI GCWGC 3 cut(s) 587, 824, 845
ApoI RAATTY 1 cut(s) 928
AseI ATTAAT 1 cut(s) 768
AsiGI ACCGGT 1 cut(s) 308
Asp700I GAANNNNTTC 1 cut(s) 683
AspLEI GCGC 3 cut(s) 115, 150, 259
AspS9I GGNCC 3 cut(s) 236, 525, 949
AsuC2I CCSGG 7 cut(s) 224, 225, 234, 251, 274, 295, 1069
AsuHPI GGTGA 5 cut(s) 38, 253, 323, 338, 719
AsuNHI GCTAGC 1 cut(s) 623
AvaI CYCGRG 1 cut(s) 223
AvaII GGWCC 2 cut(s) 236, 525
BanII GRGCYC 4 cut(s) 57, 145, 318, 981
Bbv12I GWGCWC 3 cut(s) 57, 318, 981
BbvI GCAGC 3 cut(s) 574, 836, 857
BccI CCATC 2 cut(s) 646, 883
BceAI ACGGC 1 cut(s) 163
BciVI GTATCC 1 cut(s) 791
BcnI CCSGG 7 cut(s) 224, 225, 234, 251, 274, 295, 1069
BcoDI GTCTC 2 cut(s) 13, 299
BfaI CTAG 3 cut(s) 605, 624, 939
BfmI CTRYAG 1 cut(s) 831
BfuAI ACCTGC 1 cut(s) 628
BfuI GTATCC 1 cut(s) 791
BisI GCNGC 3 cut(s) 588, 825, 846
BlsI GCNGC 3 cut(s) 589, 826, 847
Bme1390I CCNGG 7 cut(s) 224, 225, 234, 251, 274, 295, 1069
Bme18I GGWCC 2 cut(s) 236, 525
BmeRI GACNNNNNGTC 1 cut(s) 811
BmeT110I CYCGRG 1 cut(s) 223
BmgBI CACGTC 1 cut(s) 23
BmgT120I GGNCC 3 cut(s) 236, 525, 949
BmiI GGNNCC 1 cut(s) 144
BmrFI CCNGG 7 cut(s) 224, 225, 234, 251, 274, 295, 1069
BmsI GCATC 3 cut(s) 925, 988, 1006
BmtI GCTAGC 1 cut(s) 627
Bpu10I CCTNAGC 2 cut(s) 465, 674
BpuMI CCSGG 7 cut(s) 224, 225, 234, 251, 274, 295, 1069
Bsa29I ATCGAT 1 cut(s) 996
BsaBI GATNNNNATC 1 cut(s) 897
BsaHI GRCGYC 1 cut(s) 411
BsaI GGTCTC 1 cut(s) 299
BsaJI CCNNGG 2 cut(s) 223, 1067
BsaWI WCCGGW 5 cut(s) 208, 308, 634, 981, 1053
Bse118I RCCGGY 2 cut(s) 308, 522
Bse8I GATNNNNATC 1 cut(s) 897
BseAI TCCGGA 2 cut(s) 634, 981
BseCI ATCGAT 1 cut(s) 996
BseDI CCNNGG 2 cut(s) 223, 1067
BseGI GGATG 4 cut(s) 30, 269, 875, 970
BseJI GATNNNNATC 1 cut(s) 897
BseMII CTCAG 4 cut(s) 70, 412, 479, 639
BseXI GCAGC 3 cut(s) 574, 836, 857
BseYI CCCAGC 1 cut(s) 791
BsgI GTGCAG 1 cut(s) 573
Bsh1236I CGCG 4 cut(s) 115, 148, 257, 290
BshFI GGCC 1 cut(s) 950
BshTI ACCGGT 1 cut(s) 308
BshVI ATCGAT 1 cut(s) 996
BsiHKAI GWGCWC 3 cut(s) 57, 318, 981
BsiHKCI CYCGRG 1 cut(s) 223
BslFI GGGAC 1 cut(s) 1050
BsmAI GTCTC 2 cut(s) 13, 299
BsmBI CGTCTC 1 cut(s) 13
BsmFI GGGAC 1 cut(s) 1050
BsmI GAATGC 2 cut(s) 685, 862
BsnI GGCC 1 cut(s) 950
Bso31I GGTCTC 1 cut(s) 299
BsoBI CYCGRG 1 cut(s) 223
Bsp1286I GDGCHC 4 cut(s) 57, 145, 318, 981
Bsp13I TCCGGA 2 cut(s) 634, 981
Bsp143I GATC 4 cut(s) 246, 898, 984, 1009
Bsp68I TCGCGA 1 cut(s) 290
BspACI CCGC 6 cut(s) 146, 204, 239, 327, 405, 559
BspANI GGCC 1 cut(s) 950
BspCNI CTCAG 4 cut(s) 69, 411, 478, 640
BspDI ATCGAT 1 cut(s) 996
BspEI TCCGGA 2 cut(s) 634, 981
BspFNI CGCG 4 cut(s) 115, 148, 257, 290
BspHI TCATGA 4 cut(s) 49, 475, 889, 1012
BspLI GGNNCC 1 cut(s) 144
BspMI ACCTGC 1 cut(s) 628
BspOI GCTAGC 1 cut(s) 627
BspPI GGATC 4 cut(s) 241, 893, 992, 1017
BspQI GCTCTTC 1 cut(s) 969
BspTNI GGTCTC 1 cut(s) 299
BsrFI RCCGGY 2 cut(s) 308, 522
BssAI RCCGGY 2 cut(s) 308, 522
BssECI CCNNGG 2 cut(s) 223, 1067
BssMI GATC 4 cut(s) 246, 898, 984, 1009
BssNI GRCGYC 1 cut(s) 411
Bst4CI ACNGT 1 cut(s) 373
Bst6I CTCTTC 3 cut(s) 193, 651, 969
BstACI GRCGYC 1 cut(s) 411
BstC8I GCNNGC 2 cut(s) 625, 671
BstDEI CTNAG 5 cut(s) 56, 398, 465, 648, 674
BstF5I GGATG 4 cut(s) 30, 269, 875, 970
BstFNI CGCG 4 cut(s) 115, 148, 257, 290
BstHHI GCGC 3 cut(s) 115, 150, 259
BstKTI GATC 4 cut(s) 249, 901, 987, 1012
BstMAI GTCTC 2 cut(s) 13, 299
BstMBI GATC 4 cut(s) 246, 898, 984, 1009
BstMWI GCNNNNNNNGC 4 cut(s) 119, 384, 593, 845
BstNSI RCATGY 1 cut(s) 596
BstSCI CCNGG 7 cut(s) 222, 223, 232, 249, 272, 293, 1067
BstSFI CTRYAG 1 cut(s) 831
BstUI CGCG 4 cut(s) 115, 148, 257, 290
BstV1I GCAGC 3 cut(s) 574, 836, 857
BstX2I RGATCY 1 cut(s) 984
BstYI RGATCY 1 cut(s) 984
Bsu15I ATCGAT 1 cut(s) 996
BsuI GTATCC 1 cut(s) 791
BsuRI GGCC 1 cut(s) 950
BsuTUI ATCGAT 1 cut(s) 996
BtrI CACGTC 1 cut(s) 23
BtsCI GGATG 4 cut(s) 30, 269, 875, 970
BtuMI TCGCGA 1 cut(s) 290
BveI ACCTGC 1 cut(s) 628
Cac8I GCNNGC 2 cut(s) 625, 671
CaiI CAGNNNCTG 1 cut(s) 587
CciI TCATGA 4 cut(s) 49, 475, 889, 1012
CfoI GCGC 3 cut(s) 115, 150, 259
Cfr10I RCCGGY 2 cut(s) 308, 522
Cfr13I GGNCC 3 cut(s) 236, 525, 949
Cfr9I CCCGGG 1 cut(s) 223
ClaI ATCGAT 1 cut(s) 996
CpoI CGGWCCG 1 cut(s) 236
CseI GACGC 1 cut(s) 419
Csp6I GTAC 1 cut(s) 739
CspAI ACCGGT 1 cut(s) 308
CspI CGGWCCG 1 cut(s) 236
CviAII CATG 8 cut(s) 16, 50, 476, 577, 593, 703, 890, 1013
CviQI GTAC 1 cut(s) 739
DdeI CTNAG 5 cut(s) 56, 398, 465, 648, 674
DpnI GATC 4 cut(s) 248, 900, 986, 1011
DpnII GATC 4 cut(s) 246, 898, 984, 1009
DriI GACNNNNNGTC 1 cut(s) 811
Eam1104I CTCTTC 3 cut(s) 193, 651, 969
Eam1105I GACNNNNNGTC 1 cut(s) 811
EarI CTCTTC 3 cut(s) 193, 651, 969
Ecl136II GAGCTC 3 cut(s) 55, 316, 979
Eco24I GRGCYC 4 cut(s) 57, 145, 318, 981
Eco31I GGTCTC 1 cut(s) 299
Eco32I GATATC 1 cut(s) 645
Eco47I GGWCC 2 cut(s) 236, 525
Eco53kI GAGCTC 3 cut(s) 55, 316, 979
Eco57I CTGAAG 1 cut(s) 861
Eco88I CYCGRG 1 cut(s) 223
EcoICRI GAGCTC 3 cut(s) 55, 316, 979
EcoO109I RGGNCCY 1 cut(s) 949
EcoRI GAATTC 1 cut(s) 928
EcoRV GATATC 1 cut(s) 645
EcoT22I ATGCAT 1 cut(s) 775
EcoT38I GRGCYC 4 cut(s) 57, 145, 318, 981
Esp3I CGTCTC 1 cut(s) 13
FaeI CATG 8 cut(s) 19, 53, 479, 580, 596, 706, 893, 1016
FaqI GGGAC 1 cut(s) 1050
FatI CATG 8 cut(s) 15, 49, 475, 576, 592, 702, 889, 1012
FauNDI CATATG 1 cut(s) 917
FblI GTMKAC 1 cut(s) 229
Fnu4HI GCNGC 3 cut(s) 588, 825, 846
FokI GGATG 4 cut(s) 17, 256, 862, 977
FriOI GRGCYC 4 cut(s) 57, 145, 318, 981
Fsp4HI GCNGC 3 cut(s) 588, 825, 846
FspBI CTAG 3 cut(s) 605, 624, 939
GlaI GCGC 3 cut(s) 114, 149, 258
GluI GCNGC 3 cut(s) 588, 825, 846
GsaI CCCAGC 1 cut(s) 795
HaeIII GGCC 1 cut(s) 950
HgaI GACGC 1 cut(s) 419
HhaI GCGC 3 cut(s) 115, 150, 259
Hin1I GRCGYC 1 cut(s) 411
Hin1II CATG 8 cut(s) 19, 53, 479, 580, 596, 706, 893, 1016
Hin6I GCGC 3 cut(s) 113, 148, 257
HinP1I GCGC 3 cut(s) 113, 148, 257
HincII GTYRAC 1 cut(s) 230
HindII GTYRAC 1 cut(s) 230
HinfI GANTC 4 cut(s) 102, 266, 343, 760
HphI GGTGA 5 cut(s) 38, 253, 323, 338, 719
Hpy166II GTNNAC 2 cut(s) 230, 710
Hpy188I TCNGA 6 cut(s) 246, 342, 392, 401, 649, 934
Hpy8I GTNNAC 2 cut(s) 230, 710
Hpy99I CGWCG 1 cut(s) 413
HpyAV CCTTC 8 cut(s) 168, 205, 360, 611, 694, 940, 962, 962
HpyCH4III ACNGT 1 cut(s) 373
HpyCH4IV ACGT 1 cut(s) 22
HpyCH4V TGCA 8 cut(s) 132, 322, 441, 590, 755, 773, 1001, 1059
HpyF10VI GCNNNNNNNGC 4 cut(s) 119, 384, 593, 845
HpyF3I CTNAG 5 cut(s) 56, 398, 465, 648, 674
HpySE526I ACGT 1 cut(s) 22
Hsp92I GRCGYC 1 cut(s) 411
Hsp92II CATG 8 cut(s) 19, 53, 479, 580, 596, 706, 893, 1016
HspAI GCGC 3 cut(s) 113, 148, 257
Kpn2I TCCGGA 2 cut(s) 634, 981
Kzo9I GATC 4 cut(s) 246, 898, 984, 1009
LguI GCTCTTC 1 cut(s) 969
LmnI GCTCC 3 cut(s) 148, 584, 984
Lsp1109I GCAGC 3 cut(s) 574, 836, 857
LweI GCATC 3 cut(s) 925, 988, 1006
MaeI CTAG 3 cut(s) 605, 624, 939
MaeII ACGT 1 cut(s) 22
MaeIII GTNAC 1 cut(s) 26
MalI GATC 4 cut(s) 248, 900, 986, 1011
MboI GATC 4 cut(s) 246, 898, 984, 1009
MboII GAAGA 4 cut(s) 62, 180, 668, 986
MfeI CAATTG 1 cut(s) 1060
MflI RGATCY 1 cut(s) 984
MhlI GDGCHC 4 cut(s) 57, 145, 318, 981
MluCI AATT 2 cut(s) 928, 1060
MlyI GAGTC 2 cut(s) 275, 337
MmeI TCCRAC 1 cut(s) 640
MnlI CCTC 9 cut(s) 252, 272, 370, 374, 398, 424, 652, 818, 838
Mph1103I ATGCAT 1 cut(s) 775
MroI TCCGGA 2 cut(s) 634, 981
MroXI GAANNNNTTC 1 cut(s) 683
MseI TTAA 3 cut(s) 629, 768, 1087
MslI CAYNNNNRTG 2 cut(s) 78, 894
MspA1I CMGCKG 1 cut(s) 848
MspR9I CCNGG 7 cut(s) 224, 225, 234, 251, 274, 295, 1069
MunI CAATTG 1 cut(s) 1060
Mva1269I GAATGC 2 cut(s) 685, 862
MvnI CGCG 4 cut(s) 115, 148, 257, 290
MwoI GCNNNNNNNGC 4 cut(s) 119, 384, 593, 845
NciI CCSGG 7 cut(s) 224, 225, 234, 251, 274, 295, 1069
NdeI CATATG 1 cut(s) 917
NdeII GATC 4 cut(s) 246, 898, 984, 1009
NheI GCTAGC 1 cut(s) 623
NlaIII CATG 8 cut(s) 19, 53, 479, 580, 596, 706, 893, 1016
NlaIV GGNNCC 1 cut(s) 144
NmeAIII GCCGAG 1 cut(s) 1000
NmuCI GTSAC 1 cut(s) 26
NruI TCGCGA 1 cut(s) 290
NsiI ATGCAT 1 cut(s) 775
NspI RCATGY 1 cut(s) 596
PagI TCATGA 4 cut(s) 49, 475, 889, 1012
PciSI GCTCTTC 1 cut(s) 969
PcsI WCGNNNNNNNCGW 1 cut(s) 261
PctI GAATGC 2 cut(s) 685, 862
PdmI GAANNNNTTC 1 cut(s) 683
PfeI GAWTC 2 cut(s) 102, 760
PinAI ACCGGT 1 cut(s) 308
PkrI GCNGC 3 cut(s) 589, 826, 847
PleI GAGTC 2 cut(s) 274, 337
PpsI GAGTC 2 cut(s) 274, 337
PshBI ATTAAT 1 cut(s) 768
PsiI TTATAA 1 cut(s) 885
Psp124BI GAGCTC 3 cut(s) 57, 318, 981
PspFI CCCAGC 1 cut(s) 791
PspN4I GGNNCC 1 cut(s) 144
PspPI GGNCC 3 cut(s) 236, 525, 949
PstNI CAGNNNCTG 1 cut(s) 587
PsuI RGATCY 1 cut(s) 984
PvuII CAGCTG 1 cut(s) 848
RruI TCGCGA 1 cut(s) 290
RsaI GTAC 1 cut(s) 740
RsaNI GTAC 1 cut(s) 739
RseI CAYNNNNRTG 2 cut(s) 78, 894
Rsr2I CGGWCCG 1 cut(s) 236
RsrII CGGWCCG 1 cut(s) 236
SacI GAGCTC 3 cut(s) 57, 318, 981
SalI GTCGAC 1 cut(s) 228
SapI GCTCTTC 1 cut(s) 969
SaqAI TTAA 3 cut(s) 629, 768, 1087
SatI GCNGC 3 cut(s) 588, 825, 846
Sau3AI GATC 4 cut(s) 246, 898, 984, 1009
Sau96I GGNCC 3 cut(s) 236, 525, 949
SchI GAGTC 2 cut(s) 275, 337
ScrFI CCNGG 7 cut(s) 224, 225, 234, 251, 274, 295, 1069
SduI GDGCHC 4 cut(s) 57, 145, 318, 981
SfaNI GCATC 3 cut(s) 925, 988, 1006
SfcI CTRYAG 1 cut(s) 831
SinI GGWCC 2 cut(s) 236, 525
SmaI CCCGGG 1 cut(s) 225
SmiMI CAYNNNNRTG 2 cut(s) 78, 894
Sse9I AATT 2 cut(s) 928, 1060
SsiI CCGC 6 cut(s) 146, 204, 239, 327, 405, 559
SspI AATATT 1 cut(s) 92
SspMI CTAG 3 cut(s) 605, 624, 939
SstI GAGCTC 3 cut(s) 57, 318, 981
StyD4I CCNGG 7 cut(s) 222, 223, 232, 249, 272, 293, 1067
TaaI ACNGT 1 cut(s) 373
TaiI ACGT 1 cut(s) 25
TaqI TCGA 3 cut(s) 229, 303, 996
TasI AATT 2 cut(s) 928, 1060
TfiI GAWTC 2 cut(s) 102, 760
Tru1I TTAA 3 cut(s) 629, 768, 1087
Tru9I TTAA 3 cut(s) 629, 768, 1087
TseFI GTSAC 1 cut(s) 26
TseI GCWGC 3 cut(s) 587, 824, 845
Tsp45I GTSAC 1 cut(s) 26
TspDTI ATGAA 4 cut(s) 62, 464, 676, 981
TspGWI ACGGA 2 cut(s) 116, 772
TspMI CCCGGG 1 cut(s) 223
VpaK11BI GGWCC 2 cut(s) 236, 525
VspI ATTAAT 1 cut(s) 768
XapI RAATTY 1 cut(s) 928
XceI RCATGY 1 cut(s) 596
XmaI CCCGGG 1 cut(s) 223
XmiI GTMKAC 1 cut(s) 229
XmnI GAANNNNTTC 1 cut(s) 683
XspI CTAG 3 cut(s) 605, 624, 939
Zsp2I ATGCAT 1 cut(s) 775
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.