Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0006586

Physical Location & Seq

Genomic Coordinates Reverse (-)

12012410 .. 12016207

Gene Structure 3798 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G085000.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 996 bp

ATGGGACTGGTTCGTTATAGTCGTTGGGCTTCGCGCCTCAAAACATTGAATTCCCAAACCAAGCCGTTACTCTCCTTCTCCTCTTCCTCCTCCTTCTCCTCCGCCACCACAGCCGACAATGAAAACCCAGGTCGACCCGGACCGCCTCCGATCCGAGTCGCTCTCACCGAGTCATTCGGTCGAGGCGTCTTCGCGACCCGGAAAATCGAGACTGGTGAGCTCATACACACGGCCAAACCCGTTCTCTCTCACCCTTCTCTGTCAACCATCCACAAGGTCTGTTATTGCTGCCTCAGAAAGCTGAAAACCACAGACAGCTCTCAAGCCCAACGTGTTTCGTTTTGCAGCGACGAATGCCAACGACAAGCAAAGGGGTTTCATGATATGGAGATGAGAGCAGATTGGTCAGCTTACGATGACTATTGCCGGTCTCGTGGTTTGAAATATCCATTACTTGTGAAGCGGTTGGCTTGTATGGTCATGTCAAGAGCTGCATTTGCCAACCTTCTTGACATACTCCAACCTGCTAGCTTATCTCCAGAGATGATTGTAGAGATGGAAGAGGGTTTTGGCTTGCTAAGGAGTGCCTTTGAAAACTCAAATATCACTGGTGAACAGATGTCATTTTTAACTAAACAATGGTACATTGGTGTACTGGCACGGATTCGCATTAATGCATTTCGAATAGAGTTGGTCGGTGCATTGTATGATGATCTCCTGTCATCATTAGCAGCCTCTATAGAATCTGAAGCTGCTGTTGGGAATGCTGTTTATATGCTCCCATCCTTCTATAATCATGATTGCGATCCAAACGCCCACATTATATGGATAGAGAATGCAGATGCAAGATTGAAGGCCCTTCGTGATGTGGATGAAGGTGAAGAGCTCCGGATCTGCTATATCGATGCAAGCATGGATCATGATGCTCGGCAGAGTTTCCTGTCCCATGGGTTTGGTTTTCAGTGCAATTGTCATCGATGTCTGACTGGTGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SET

Protein Analysis

332

Amino Acids

37.01

Weight (kDa)

6.51

Isoelectric Point (pI)

55.4

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006586)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G06620 AT5G06620
fragaria_vesca	FvH4_6g21530 FvH4_6g21530 FvH4_6g21530 FvH4_6g21530 FvH4_6g21530
malus_domestica	MD12G1052100.v1.1
prunus_persica	Prupe.7G085000_v2.0.a1 Prupe.7G085000_v2.0.a1 Prupe.7G085000_v2.0.a1 Prupe.7G085000_v2.0.a1
pyrus_communis	pycom12g04590
rosa_chinensis	RchiOBHm_Chr3g0478741 RchiOBHm_Chr3g0478761
rosa_laevigata	RLG00000023628
rosa_multiflora	Rmu_sc0001519.1_g000008
rosa_roxburghii	Rroxscaffold_6G00403110
rosa_rugosa	Rorug03G0167600 Rorug03G0167700 Rorug03G0167800
rosa_samantha	Rh3AG219700 Rh3BG251500 Rh3CG248500 Rh3DG244700
rosa_wichuraiana	Rw3G019740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	532
AccI	GTMKAC	1 cut(s)	133
AccII	CGCG	2 cut(s)	34, 194
AccIII	TCCGGA	1 cut(s)	888
AciI	CCGC	3 cut(s)	102, 143, 463
AclWI	GGATC	4 cut(s)	145, 800, 899, 924
AcoI	YGGCCR	1 cut(s)	231
AcsI	RAATTY	1 cut(s)	49
AcuI	CTGAAG	1 cut(s)	768
AcyI	GRCGYC	1 cut(s)	186
AfaI	GTAC	2 cut(s)	644, 654
AflIII	ACRYGT	1 cut(s)	331
AgsI	TTSAA	4 cut(s)	49, 442, 593, 853
AjnI	CCWGG	1 cut(s)	127
AjuI	GAANNNNNNNTTGG	4 cut(s)	552, 584, 741, 773
AluBI	AGCT	8 cut(s)	220, 301, 318, 410, 491, 531, 752, 886
AluI	AGCT	8 cut(s)	220, 301, 318, 410, 491, 531, 752, 886
Alw21I	GWGCWC	2 cut(s)	222, 888
Alw26I	GTCTC	2 cut(s)	203, 435
AlwI	GGATC	4 cut(s)	145, 800, 899, 924
Aor13HI	TCCGGA	1 cut(s)	888
AoxI	GGCC	2 cut(s)	231, 855
ApeKI	GCWGC	5 cut(s)	288, 345, 491, 731, 752
ApoI	RAATTY	1 cut(s)	49
AseI	ATTAAT	1 cut(s)	672
AspLEI	GCGC	1 cut(s)	36
AspS9I	GGNCC	2 cut(s)	140, 856
AsuC2I	CCSGG	2 cut(s)	138, 199
AsuHPI	GGTGA	5 cut(s)	157, 227, 242, 623, 890
AsuII	TTCGAA	1 cut(s)	682
AsuNHI	GCTAGC	1 cut(s)	527
AvaII	GGWCC	1 cut(s)	140
BaeI	ACNNNNGTAYC	2 cut(s)	634, 667
BanII	GRGCYC	2 cut(s)	222, 888
BauI	CACGAG	1 cut(s)	432
BbsI	GAAGAC	1 cut(s)	181
Bbv12I	GWGCWC	2 cut(s)	222, 888
BbvI	GCAGC	5 cut(s)	275, 357, 478, 739, 743
BccI	CCATC	3 cut(s)	275, 550, 790
BceAI	ACGGC	2 cut(s)	49, 246
BciT130I	CCWGG	1 cut(s)	129
BcnI	CCSGG	2 cut(s)	138, 199
BcoDI	GTCTC	2 cut(s)	203, 435
BfaI	CTAG	1 cut(s)	528
BfmI	CTRYAG	1 cut(s)	738
BfuAI	ACCTGC	1 cut(s)	532
BisI	GCNGC	5 cut(s)	289, 346, 492, 732, 753
BlsI	GCNGC	5 cut(s)	290, 347, 493, 733, 754
Bme1390I	CCNGG	3 cut(s)	129, 138, 199
Bme18I	GGWCC	1 cut(s)	140
BmgT120I	GGNCC	2 cut(s)	140, 856
BmrFI	CCNGG	3 cut(s)	129, 138, 199
BmsI	GCATC	3 cut(s)	832, 895, 913
BmtI	GCTAGC	1 cut(s)	531
BpiI	GAAGAC	1 cut(s)	181
BplI	GAGNNNNNCTC	2 cut(s)	147, 179
BpmI	CTGGAG	1 cut(s)	522
Bpu10I	CCTNAGC	1 cut(s)	578
Bpu14I	TTCGAA	1 cut(s)	682
BpuEI	CTTGAG	1 cut(s)	306
BpuMI	CCSGG	2 cut(s)	138, 199
Bsa29I	ATCGAT	2 cut(s)	903, 976
BsaBI	GATNNNNATC	1 cut(s)	804
BsaHI	GRCGYC	1 cut(s)	186
BsaI	GGTCTC	1 cut(s)	435
BsaJI	CCNNGG	2 cut(s)	127, 946
BsaWI	WCCGGW	1 cut(s)	888
Bse118I	RCCGGY	1 cut(s)	426
Bse1I	ACTGG	5 cut(s)	12, 217, 613, 660, 991
Bse8I	GATNNNNATC	1 cut(s)	804
BseAI	TCCGGA	1 cut(s)	888
BseBI	CCWGG	1 cut(s)	129
BseCI	ATCGAT	2 cut(s)	903, 976
BseDI	CCNNGG	2 cut(s)	127, 946
BseGI	GGATG	3 cut(s)	267, 782, 877
BseJI	GATNNNNATC	1 cut(s)	804
BseMII	CTCAG	1 cut(s)	307
BseNI	ACTGG	5 cut(s)	12, 217, 613, 660, 991
BseRI	GAGGAG	3 cut(s)	70, 79, 88
BseXI	GCAGC	5 cut(s)	275, 357, 478, 739, 743
Bsh1236I	CGCG	2 cut(s)	34, 194
Bsh1285I	CGRYCG	1 cut(s)	181
BshFI	GGCC	2 cut(s)	233, 857
BshVI	ATCGAT	2 cut(s)	903, 976
BsiEI	CGRYCG	1 cut(s)	181
BsiHKAI	GWGCWC	2 cut(s)	222, 888
BsiSI	CCGG	4 cut(s)	138, 199, 427, 889
BslFI	GGGAC	2 cut(s)	18, 928
BsmAI	GTCTC	2 cut(s)	203, 435
BsmFI	GGGAC	2 cut(s)	18, 928
BsmI	GAATGC	3 cut(s)	359, 769, 841
BsnI	GGCC	2 cut(s)	233, 857
Bso31I	GGTCTC	1 cut(s)	435
Bsp119I	TTCGAA	1 cut(s)	682
Bsp1286I	GDGCHC	2 cut(s)	222, 888
Bsp13I	TCCGGA	1 cut(s)	888
Bsp143I	GATC	5 cut(s)	150, 712, 805, 891, 916
Bsp19I	CCATGG	1 cut(s)	946
Bsp68I	TCGCGA	1 cut(s)	194
BspACI	CCGC	3 cut(s)	102, 143, 463
BspANI	GGCC	2 cut(s)	233, 857
BspCNI	CTCAG	1 cut(s)	306
BspDI	ATCGAT	2 cut(s)	903, 976
BspEI	TCCGGA	1 cut(s)	888
BspFNI	CGCG	2 cut(s)	34, 194
BspHI	TCATGA	3 cut(s)	379, 796, 919
BspMI	ACCTGC	1 cut(s)	532
BspOI	GCTAGC	1 cut(s)	531
BspPI	GGATC	4 cut(s)	145, 800, 899, 924
BspQI	GCTCTTC	1 cut(s)	876
BspT104I	TTCGAA	1 cut(s)	682
BspTNI	GGTCTC	1 cut(s)	435
BsrFI	RCCGGY	1 cut(s)	426
BsrI	ACTGG	5 cut(s)	12, 217, 613, 660, 991
BssAI	RCCGGY	1 cut(s)	426
BssECI	CCNNGG	2 cut(s)	127, 946
BssMI	GATC	5 cut(s)	150, 712, 805, 891, 916
BssNI	GRCGYC	1 cut(s)	186
BssSI	CACGAG	1 cut(s)	432
BssT1I	CCWWGG	1 cut(s)	946
Bst2BI	CACGAG	1 cut(s)	432
Bst2UI	CCWGG	1 cut(s)	129
Bst6I	CTCTTC	3 cut(s)	88, 555, 876
BstACI	GRCGYC	1 cut(s)	186
BstBI	TTCGAA	1 cut(s)	682
BstC8I	GCNNGC	3 cut(s)	529, 575, 910
BstDEI	CTNAG	2 cut(s)	293, 578
BstDSI	CCRYGG	1 cut(s)	946
BstF5I	GGATG	3 cut(s)	267, 782, 877
BstFNI	CGCG	2 cut(s)	34, 194
BstHHI	GCGC	1 cut(s)	36
BstKTI	GATC	5 cut(s)	153, 715, 808, 894, 919
BstMAI	GTCTC	2 cut(s)	203, 435
BstMBI	GATC	5 cut(s)	150, 712, 805, 891, 916
BstMCI	CGRYCG	1 cut(s)	181
BstMWI	GCNNNNNNNGC	3 cut(s)	110, 354, 497
BstNI	CCWGG	1 cut(s)	129
BstSCI	CCNGG	3 cut(s)	127, 136, 197
BstSFI	CTRYAG	1 cut(s)	738
BstUI	CGCG	2 cut(s)	34, 194
BstV1I	GCAGC	5 cut(s)	275, 357, 478, 739, 743
BstV2I	GAAGAC	1 cut(s)	181
BstX2I	RGATCY	1 cut(s)	891
BstXI	CCANNNNNNTGG	1 cut(s)	953
BstYI	RGATCY	1 cut(s)	891
Bsu15I	ATCGAT	2 cut(s)	903, 976
BsuRI	GGCC	2 cut(s)	233, 857
BsuTUI	ATCGAT	2 cut(s)	903, 976
BtgI	CCRYGG	1 cut(s)	946
BtsCI	GGATG	3 cut(s)	267, 782, 877
BtsIMutI	CAGTG	2 cut(s)	606, 968
BtuMI	TCGCGA	1 cut(s)	194
BveI	ACCTGC	1 cut(s)	532
Cac8I	GCNNGC	3 cut(s)	529, 575, 910
CciI	TCATGA	3 cut(s)	379, 796, 919
CfoI	GCGC	1 cut(s)	36
Cfr10I	RCCGGY	1 cut(s)	426
Cfr13I	GGNCC	2 cut(s)	140, 856
ClaI	ATCGAT	2 cut(s)	903, 976
CpoI	CGGWCCG	1 cut(s)	140
CseI	GACGC	1 cut(s)	175
Csp6I	GTAC	2 cut(s)	643, 653
CspI	CGGWCCG	1 cut(s)	140
CviAII	CATG	6 cut(s)	380, 481, 797, 913, 920, 947
CviQI	GTAC	2 cut(s)	643, 653
DdeI	CTNAG	2 cut(s)	293, 578
DpnI	GATC	5 cut(s)	152, 714, 807, 893, 918
DpnII	GATC	5 cut(s)	150, 712, 805, 891, 916
EaeI	YGGCCR	1 cut(s)	231
Eam1104I	CTCTTC	3 cut(s)	88, 555, 876
EarI	CTCTTC	3 cut(s)	88, 555, 876
EciI	GGCGGA	1 cut(s)	91
Ecl136II	GAGCTC	2 cut(s)	220, 886
Eco130I	CCWWGG	1 cut(s)	946
Eco24I	GRGCYC	2 cut(s)	222, 888
Eco31I	GGTCTC	1 cut(s)	435
Eco47I	GGWCC	1 cut(s)	140
Eco53kI	GAGCTC	2 cut(s)	220, 886
Eco57I	CTGAAG	1 cut(s)	768
EcoICRI	GAGCTC	2 cut(s)	220, 886
EcoO109I	RGGNCCY	1 cut(s)	856
EcoRI	GAATTC	1 cut(s)	49
EcoRII	CCWGG	1 cut(s)	127
EcoT14I	CCWWGG	1 cut(s)	946
EcoT22I	ATGCAT	1 cut(s)	679
EcoT38I	GRGCYC	2 cut(s)	222, 888
ErhI	CCWWGG	1 cut(s)	946
FaeI	CATG	6 cut(s)	383, 484, 800, 916, 923, 950
FaqI	GGGAC	2 cut(s)	18, 928
FatI	CATG	6 cut(s)	379, 480, 796, 912, 919, 946
FblI	GTMKAC	1 cut(s)	133
Fnu4HI	GCNGC	5 cut(s)	289, 346, 492, 732, 753
FokI	GGATG	3 cut(s)	254, 769, 884
FriOI	GRGCYC	2 cut(s)	222, 888
Fsp4HI	GCNGC	5 cut(s)	289, 346, 492, 732, 753
FspBI	CTAG	1 cut(s)	528
GlaI	GCGC	1 cut(s)	35
GluI	GCNGC	5 cut(s)	289, 346, 492, 732, 753
GsuI	CTGGAG	1 cut(s)	522
HaeIII	GGCC	2 cut(s)	233, 857
HapII	CCGG	4 cut(s)	138, 199, 427, 889
HgaI	GACGC	1 cut(s)	175
HhaI	GCGC	1 cut(s)	36
Hin1I	GRCGYC	1 cut(s)	186
Hin1II	CATG	6 cut(s)	383, 484, 800, 916, 923, 950
Hin6I	GCGC	1 cut(s)	34
HinP1I	GCGC	1 cut(s)	34
HincII	GTYRAC	2 cut(s)	134, 264
HindII	GTYRAC	2 cut(s)	134, 264
HinfI	GANTC	4 cut(s)	156, 170, 664, 743
HpaII	CCGG	4 cut(s)	138, 199, 427, 889
HphI	GGTGA	5 cut(s)	157, 227, 242, 623, 890
Hpy166II	GTNNAC	4 cut(s)	134, 264, 614, 653
Hpy188I	TCNGA	5 cut(s)	150, 155, 296, 748, 984
Hpy8I	GTNNAC	4 cut(s)	134, 264, 614, 653
Hpy99I	CGWCG	1 cut(s)	353
HpyAV	CCTTC	8 cut(s)	85, 103, 264, 515, 796, 847, 869, 869
HpyCH4IV	ACGT	1 cut(s)	331
HpyCH4V	TGCA	8 cut(s)	345, 494, 677, 701, 839, 845, 908, 966
HpyF10VI	GCNNNNNNNGC	3 cut(s)	110, 354, 497
HpyF3I	CTNAG	2 cut(s)	293, 578
HpySE526I	ACGT	1 cut(s)	331
Hsp92I	GRCGYC	1 cut(s)	186
Hsp92II	CATG	6 cut(s)	383, 484, 800, 916, 923, 950
HspAI	GCGC	1 cut(s)	34
Kpn2I	TCCGGA	1 cut(s)	888
Kzo9I	GATC	5 cut(s)	150, 712, 805, 891, 916
LguI	GCTCTTC	1 cut(s)	876
LmnI	GCTCC	2 cut(s)	783, 891
Lsp1109I	GCAGC	5 cut(s)	275, 357, 478, 739, 743
LweI	GCATC	3 cut(s)	832, 895, 913
MaeI	CTAG	1 cut(s)	528
MaeII	ACGT	1 cut(s)	331
MaeIII	GTNAC	1 cut(s)	66
MalI	GATC	5 cut(s)	152, 714, 807, 893, 918
MboI	GATC	5 cut(s)	150, 712, 805, 891, 916
MboII	GAAGA	4 cut(s)	75, 181, 572, 893
MfeI	CAATTG	1 cut(s)	967
MflI	RGATCY	1 cut(s)	891
MhlI	GDGCHC	2 cut(s)	222, 888
MluCI	AATT	2 cut(s)	49, 967
MlyI	GAGTC	2 cut(s)	165, 179
MmeI	TCCRAC	1 cut(s)	544
Mph1103I	ATGCAT	1 cut(s)	679
MroI	TCCGGA	1 cut(s)	888
MseI	TTAA	3 cut(s)	629, 672, 994
MspI	CCGG	4 cut(s)	138, 199, 427, 889
MspR9I	CCNGG	3 cut(s)	129, 138, 199
MunI	CAATTG	1 cut(s)	967
Mva1269I	GAATGC	3 cut(s)	359, 769, 841
MvaI	CCWGG	1 cut(s)	129
MvnI	CGCG	2 cut(s)	34, 194
MwoI	GCNNNNNNNGC	3 cut(s)	110, 354, 497
NciI	CCSGG	2 cut(s)	138, 199
NcoI	CCATGG	1 cut(s)	946
NdeII	GATC	5 cut(s)	150, 712, 805, 891, 916
NheI	GCTAGC	1 cut(s)	527
NlaIII	CATG	6 cut(s)	383, 484, 800, 916, 923, 950
NmeAIII	GCCGAG	1 cut(s)	907
NruI	TCGCGA	1 cut(s)	194
NsiI	ATGCAT	1 cut(s)	679
NspV	TTCGAA	1 cut(s)	682
PagI	TCATGA	3 cut(s)	379, 796, 919
PciSI	GCTCTTC	1 cut(s)	876
PcsI	WCGNNNNNNNCGW	3 cut(s)	19, 165, 183
PctI	GAATGC	3 cut(s)	359, 769, 841
PfeI	GAWTC	2 cut(s)	664, 743
PkrI	GCNGC	5 cut(s)	290, 347, 493, 733, 754
PleI	GAGTC	2 cut(s)	164, 178
PpsI	GAGTC	2 cut(s)	164, 178
PshBI	ATTAAT	1 cut(s)	672
Psp124BI	GAGCTC	2 cut(s)	222, 888
Psp6I	CCWGG	1 cut(s)	127
PspGI	CCWGG	1 cut(s)	127
PspPI	GGNCC	2 cut(s)	140, 856
PsuI	RGATCY	1 cut(s)	891
RruI	TCGCGA	1 cut(s)	194
RsaI	GTAC	2 cut(s)	644, 654
RsaNI	GTAC	2 cut(s)	643, 653
Rsr2I	CGGWCCG	1 cut(s)	140
RsrII	CGGWCCG	1 cut(s)	140
SacI	GAGCTC	2 cut(s)	222, 888
SalI	GTCGAC	1 cut(s)	132
SapI	GCTCTTC	1 cut(s)	876
SaqAI	TTAA	3 cut(s)	629, 672, 994
SatI	GCNGC	5 cut(s)	289, 346, 492, 732, 753
Sau3AI	GATC	5 cut(s)	150, 712, 805, 891, 916
Sau96I	GGNCC	2 cut(s)	140, 856
SchI	GAGTC	2 cut(s)	165, 179
ScrFI	CCNGG	3 cut(s)	129, 138, 199
SduI	GDGCHC	2 cut(s)	222, 888
SfaNI	GCATC	3 cut(s)	832, 895, 913
SfcI	CTRYAG	1 cut(s)	738
SfuI	TTCGAA	1 cut(s)	682
SinI	GGWCC	1 cut(s)	140
SmlI	CTYRAG	1 cut(s)	321
SmoI	CTYRAG	1 cut(s)	321
Sse9I	AATT	2 cut(s)	49, 967
SsiI	CCGC	3 cut(s)	102, 143, 463
SspMI	CTAG	1 cut(s)	528
SstI	GAGCTC	2 cut(s)	222, 888
StyD4I	CCNGG	3 cut(s)	127, 136, 197
StyI	CCWWGG	1 cut(s)	946
TaiI	ACGT	1 cut(s)	334
TaqI	TCGA	6 cut(s)	133, 181, 207, 682, 903, 976
TaqII	GACCGA	1 cut(s)	167
TasI	AATT	2 cut(s)	49, 967
TatI	WGTACW	1 cut(s)	652
TfiI	GAWTC	2 cut(s)	664, 743
Tru1I	TTAA	3 cut(s)	629, 672, 994
Tru9I	TTAA	3 cut(s)	629, 672, 994
TscAI	CASTG	2 cut(s)	613, 968
TseI	GCWGC	5 cut(s)	288, 345, 491, 731, 752
TspDTI	ATGAA	3 cut(s)	135, 368, 888
TspGWI	ACGGA	1 cut(s)	676
TspRI	CASTG	2 cut(s)	613, 968
VpaK11BI	GGWCC	1 cut(s)	140
VspI	ATTAAT	1 cut(s)	672
XapI	RAATTY	1 cut(s)	49
XmiI	GTMKAC	1 cut(s)	133
XspI	CTAG	1 cut(s)	528
Zsp2I	ATGCAT	1 cut(s)	679

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.