Rorug03G0167700

Histone-lysine N-methyltransferase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
Physical Location & Seq
Forward (+)
14004017 .. 14008317
4301 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0167700.1

Sequence Viewer

Length: 1569 bp
ATGGAGAGAGAAGAAGACGATTCAGTGAGCGAGGTTCTCAGAGATCGATTCAGACTCTCCACCATCTCTATCGTCGATGCCGAAGCGAAGAGAAGCGGCATGGAGATATCGGAACCCGTGGTGGCTTGCATTTCTGACTTGGCCTTCAAATTTACTGATGCAGGTAATGATGCAGATGTGCCGAACAGTGGTGGCTATCACTCTGTTGCCATTGCATATGGAAACCCGGATGAAACAACCGAGCAGAAGAGTAATGATGCTGAGCCTGTTTGTCTGATTGTTAACAAATATGGCCAGATGATAATTGCTAAGCCTCCAACAGAAAAGATACATCAGATCATTGCAAGAACGGCTGCGTTTGTCGCCAAGCATGGTGGACAGTCGGAAATTGTTTTGAGGGTGAAACAGGGAGACAATCCAATGTTTGGGTTCTTGATGCCTGACCATCACCTTCATGCATACTTTAGGTTTCTTGTCGATCGCCAAGAACTACTGAAGCAGGATACTCACGGAGTTTCTGCACAGGAAGAGAAGAAAAACAGTGGTGGTCTTGATCAGACAGGTGGAGCATTGTCTTTGCTTGGTTCTGTATATGGGTCTGGAGAGGATGAGGATGACATGGCTGAGGATGCATCTGACTTGCAAAAACTGAACTCTCAAGAAGCTGTTGATGCAATTATTGCAACTGTGCATGGGTCAGAGCAGAAAGAATCTACTGGAAATGTAACCGGGAAAAATGATACTGTTTCCAAGTTTCCATGTCCTCCTTTGAAGGAAAAAGCTCCTGCTCTGCCTAGTGCATCGAAGGTTGAACTACCCATTTTGGAGCCACCATCTGATCAAAGGAGAGTTGTGGAGAAAATTGTTGAGTTCATATTAAAGAACGGCAGAGAGTTTGAAGCTATTCTGGCTGAACAGAACTGTAAACAGGGAAGATTTTTGTTCCTTCTGCCATCTAATCAATATCATCCTTACTACTTGAAAGTTCTCCAAGATGCTCAAGAGTCCTTGGATTTGGTCCTTCTTTTTGATGTTCTGACTGTCCCCTGCATTACTGATATTCATGTCCTGCCCTTTTTTACAGCTCCATTGGAAGTTGATGTTTCAAATAAGGTGGAAGAATTTGACAAGAAATTTTCTGTTGATGAGTGTAATGAGCGACGATCAAAGAAGGCCTATCGTACTCTATCTAAAAGGGTTGAAGAAGAAGAAGATGGTGAAGGTGACGGTGATGAAGAGAAAGAGAGCAGGGAAGAAGATAAAACGGGTCAGAAGCACTCTAAGAAGCGTCGGTCTCATCATTCTTCAGACAATGACTGTCTGTTTATCTTGGAGTTGGCTGCTACCCAGTTGCTCCAAACAAGGACAGCAGCTGCAGTGTCAGAAAATGCCATAGTTCTGAGTTTTAAATCGAGGGTCATTACTGGATACTTACTAGCAGGATCTGCCATTGGACCCAGAGGCTTGAATTTTGGCCTTGGATTACAAGTTGTGAAATATTTGGCTGCCAAATATGAAGAGCTAGGGTGTGAAGTGAAATGGATGGGCAAGCCTGATAAGGTGATCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

522

Amino Acids

57.78

Weight (kDa)

5.05

Isoelectric Point (pI)

44.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Surp PF01805 112 - 160 5.6e-15 Surp module
Surp PF01805 282 - 331 2e-10 Surp module
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 152
AccB7I CCANNNNNTGG 1 cut(s) 425
AciI CCGC 1 cut(s) 96
AclWI GGATC 1 cut(s) 1450
AcoI YGGCCR 1 cut(s) 292
AcsI RAATTY 4 cut(s) 149, 1121, 1133, 1468
AcuI CTGAAG 2 cut(s) 515, 1290
AfaI GTAC 1 cut(s) 1183
AfiI CCNNNNNNNGG 2 cut(s) 188, 425
AgsI TTSAA 8 cut(s) 148, 772, 812, 899, 982, 1107, 1202, 1468
AluBI AGCT 6 cut(s) 665, 782, 902, 1085, 1373, 1522
AluI AGCT 6 cut(s) 665, 782, 902, 1085, 1373, 1522
Alw26I GTCTC 2 cut(s) 405, 1299
AlwI GGATC 1 cut(s) 1450
AlwNI CAGNNNCTG 2 cut(s) 1373, 1445
AoxI GGCC 4 cut(s) 141, 292, 1173, 1474
ApeKI GCWGC 5 cut(s) 353, 1340, 1370, 1373, 1505
ApoI RAATTY 4 cut(s) 149, 1121, 1133, 1468
Asp700I GAANNNNTTC 1 cut(s) 903
AspS9I GGNCC 2 cut(s) 1018, 1454
AsuC2I CCSGG 2 cut(s) 227, 730
AsuHPI GGTGA 5 cut(s) 412, 440, 1229, 1235, 1241
AvaII GGWCC 2 cut(s) 1018, 1454
BalI TGGCCA 1 cut(s) 294
BbsI GAAGAC 1 cut(s) 21
BbvCI CCTCAGC 1 cut(s) 624
BbvI GCAGC 5 cut(s) 340, 1327, 1360, 1382, 1492
BccI CCATC 6 cut(s) 71, 453, 841, 961, 1208, 1537
BceAI ACGGC 2 cut(s) 366, 901
BciVI GTATCC 2 cut(s) 496, 1421
BclI TGATCA 2 cut(s) 553, 838
BcnI CCSGG 2 cut(s) 227, 730
BcoDI GTCTC 2 cut(s) 405, 1299
BfaI CTAG 4 cut(s) 795, 1436, 1523, 1567
BfmI CTRYAG 1 cut(s) 1374
BfuAI ACCTGC 1 cut(s) 152
BfuI GTATCC 2 cut(s) 496, 1421
BisI GCNGC 6 cut(s) 97, 354, 1341, 1371, 1374, 1506
BlpI GCTNAGC 2 cut(s) 261, 309
BlsI GCNGC 6 cut(s) 98, 355, 1342, 1372, 1375, 1507
Bme1390I CCNGG 2 cut(s) 227, 730
Bme18I GGWCC 2 cut(s) 1018, 1454
BmgT120I GGNCC 2 cut(s) 1018, 1454
BmiI GGNNCC 3 cut(s) 114, 828, 1456
BmrFI CCNGG 2 cut(s) 227, 730
BmrI ACTGGG 1 cut(s) 1342
BmuI ACTGGG 1 cut(s) 1342
BpiI GAAGAC 1 cut(s) 21
BpmI CTGGAG 1 cut(s) 621
Bpu10I CCTNAGC 1 cut(s) 624
Bpu1102I GCTNAGC 2 cut(s) 261, 309
BpuEI CTTGAG 2 cut(s) 642, 984
BpuMI CCSGG 2 cut(s) 227, 730
Bsa29I ATCGAT 1 cut(s) 46
BsaI GGTCTC 1 cut(s) 1299
BsaJI CCNNGG 3 cut(s) 117, 1008, 1477
Bsc4I CCNNNNNNNGG 2 cut(s) 188, 425
Bse1I ACTGG 3 cut(s) 721, 1348, 1429
Bse3DI GCAATG 2 cut(s) 210, 339
BseCI ATCGAT 1 cut(s) 46
BseDI CCNNGG 3 cut(s) 117, 1008, 1477
BseGI GGATG 6 cut(s) 235, 613, 619, 634, 967, 1548
BseLI CCNNNNNNNGG 2 cut(s) 188, 425
BseMI GCAATG 2 cut(s) 210, 339
BseMII CTCAG 4 cut(s) 52, 252, 615, 1391
BseNI ACTGG 3 cut(s) 721, 1348, 1429
BseXI GCAGC 5 cut(s) 340, 1327, 1360, 1382, 1492
BsgI GTGCAG 1 cut(s) 504
Bsh1285I CGRYCG 1 cut(s) 481
BshFI GGCC 4 cut(s) 143, 294, 1175, 1476
BshVI ATCGAT 1 cut(s) 46
BsiEI CGRYCG 1 cut(s) 481
BsiSI CCGG 2 cut(s) 227, 729
BslFI GGGAC 1 cut(s) 1028
BslI CCNNNNNNNGG 2 cut(s) 188, 425
BsmAI GTCTC 2 cut(s) 405, 1299
BsmFI GGGAC 1 cut(s) 1028
BsnI GGCC 4 cut(s) 143, 294, 1175, 1476
Bso31I GGTCTC 1 cut(s) 1299
Bsp143I GATC 8 cut(s) 43, 336, 478, 553, 838, 1163, 1442, 1563
Bsp1720I GCTNAGC 2 cut(s) 261, 309
BspACI CCGC 1 cut(s) 96
BspANI GGCC 4 cut(s) 143, 294, 1175, 1476
BspCNI CTCAG 4 cut(s) 51, 253, 616, 1392
BspDI ATCGAT 1 cut(s) 46
BspLI GGNNCC 3 cut(s) 114, 828, 1456
BspMAI CTGCAG 1 cut(s) 1378
BspMI ACCTGC 1 cut(s) 152
BspPI GGATC 1 cut(s) 1450
BspQI GCTCTTC 1 cut(s) 1512
BspTNI GGTCTC 1 cut(s) 1299
BsrDI GCAATG 2 cut(s) 210, 339
BsrI ACTGG 3 cut(s) 721, 1348, 1429
BssECI CCNNGG 3 cut(s) 117, 1008, 1477
BssMI GATC 8 cut(s) 43, 336, 478, 553, 838, 1163, 1442, 1563
BssT1I CCWWGG 2 cut(s) 1008, 1477
Bst4CI ACNGT 9 cut(s) 188, 381, 542, 688, 745, 923, 1042, 1229, 1319
Bst6I CTCTTC 5 cut(s) 83, 242, 522, 1230, 1512
BstAPI GCANNNNNTGC 2 cut(s) 680, 1445
BstC8I GCNNGC 2 cut(s) 127, 1550
BstDEI CTNAG 6 cut(s) 38, 261, 309, 624, 1281, 1400
BstDSI CCRYGG 1 cut(s) 117
BstF5I GGATG 6 cut(s) 235, 613, 619, 634, 967, 1548
BstKTI GATC 8 cut(s) 46, 339, 481, 556, 841, 1166, 1445, 1566
BstMAI GTCTC 2 cut(s) 405, 1299
BstMBI GATC 8 cut(s) 43, 336, 478, 553, 838, 1163, 1442, 1563
BstMCI CGRYCG 1 cut(s) 481
BstMWI GCNNNNNNNGC 7 cut(s) 350, 362, 629, 671, 680, 908, 1445
BstSCI CCNGG 2 cut(s) 225, 728
BstSFI CTRYAG 1 cut(s) 1374
BstV1I GCAGC 5 cut(s) 340, 1327, 1360, 1382, 1492
BstV2I GAAGAC 1 cut(s) 21
BstX2I RGATCY 1 cut(s) 1442
BstYI RGATCY 1 cut(s) 1442
Bsu15I ATCGAT 1 cut(s) 46
BsuI GTATCC 2 cut(s) 496, 1421
BsuRI GGCC 4 cut(s) 143, 294, 1175, 1476
BsuTUI ATCGAT 1 cut(s) 46
BtgI CCRYGG 1 cut(s) 117
BtsCI GGATG 6 cut(s) 235, 613, 619, 634, 967, 1548
BtsI GCAGTG 1 cut(s) 1383
BtsIMutI CAGTG 4 cut(s) 30, 193, 547, 1383
BveI ACCTGC 1 cut(s) 152
Cac8I GCNNGC 2 cut(s) 127, 1550
CaiI CAGNNNCTG 2 cut(s) 1373, 1445
Cfr13I GGNCC 2 cut(s) 1018, 1454
ClaI ATCGAT 1 cut(s) 46
CseI GACGC 1 cut(s) 1277
Csp6I GTAC 1 cut(s) 1182
CspCI CAANNNNNGTGG 4 cut(s) 355, 390, 1095, 1130
CviAII CATG 7 cut(s) 100, 371, 455, 619, 692, 759, 1064
CviQI GTAC 1 cut(s) 1182
DdeI CTNAG 6 cut(s) 38, 261, 309, 624, 1281, 1400
DpnI GATC 8 cut(s) 45, 338, 480, 555, 840, 1165, 1444, 1565
DpnII GATC 8 cut(s) 43, 336, 478, 553, 838, 1163, 1442, 1563
DraI TTTAAA 1 cut(s) 1408
EaeI YGGCCR 1 cut(s) 292
Eam1104I CTCTTC 5 cut(s) 83, 242, 522, 1230, 1512
EarI CTCTTC 5 cut(s) 83, 242, 522, 1230, 1512
Eco130I CCWWGG 2 cut(s) 1008, 1477
Eco147I AGGCCT 1 cut(s) 1175
Eco31I GGTCTC 1 cut(s) 1299
Eco32I GATATC 1 cut(s) 108
Eco47I GGWCC 2 cut(s) 1018, 1454
Eco57I CTGAAG 2 cut(s) 515, 1290
EcoRV GATATC 1 cut(s) 108
EcoT14I CCWWGG 2 cut(s) 1008, 1477
EcoT22I ATGCAT 2 cut(s) 460, 634
ErhI CCWWGG 2 cut(s) 1008, 1477
FaeI CATG 7 cut(s) 103, 374, 458, 622, 695, 762, 1067
FaqI GGGAC 1 cut(s) 1028
FatI CATG 7 cut(s) 99, 370, 454, 618, 691, 758, 1063
FauNDI CATATG 1 cut(s) 217
FbaI TGATCA 2 cut(s) 553, 838
Fnu4HI GCNGC 6 cut(s) 97, 354, 1341, 1371, 1374, 1506
FokI GGATG 6 cut(s) 242, 620, 626, 641, 954, 1555
Fsp4HI GCNGC 6 cut(s) 97, 354, 1341, 1371, 1374, 1506
FspBI CTAG 4 cut(s) 795, 1436, 1523, 1567
GluI GCNGC 6 cut(s) 97, 354, 1341, 1371, 1374, 1506
GsuI CTGGAG 1 cut(s) 621
HaeIII GGCC 4 cut(s) 143, 294, 1175, 1476
HapII CCGG 2 cut(s) 227, 729
HgaI GACGC 1 cut(s) 1277
Hin1II CATG 7 cut(s) 103, 374, 458, 622, 695, 762, 1067
HincII GTYRAC 1 cut(s) 283
HindII GTYRAC 1 cut(s) 283
HinfI GANTC 5 cut(s) 20, 48, 54, 710, 1004
HpaI GTTAAC 1 cut(s) 283
HpaII CCGG 2 cut(s) 227, 729
HphI GGTGA 5 cut(s) 412, 440, 1229, 1235, 1241
Hpy166II GTNNAC 3 cut(s) 283, 377, 926
Hpy188III TCNNGA 5 cut(s) 433, 551, 600, 659, 1001
Hpy8I GTNNAC 3 cut(s) 283, 377, 926
Hpy99I CGWCG 3 cut(s) 77, 1164, 1293
HpyAV CCTTC 8 cut(s) 154, 461, 766, 799, 956, 1031, 1165, 1214
HpyCH4III ACNGT 9 cut(s) 188, 381, 542, 688, 745, 923, 1042, 1229, 1319
HpyF10VI GCNNNNNNNGC 7 cut(s) 350, 362, 629, 671, 680, 908, 1445
HpyF3I CTNAG 6 cut(s) 38, 261, 309, 624, 1281, 1400
Hsp92II CATG 7 cut(s) 103, 374, 458, 622, 695, 762, 1067
Ksp22I TGATCA 2 cut(s) 553, 838
KspAI GTTAAC 1 cut(s) 283
Kzo9I GATC 8 cut(s) 43, 336, 478, 553, 838, 1163, 1442, 1563
LguI GCTCTTC 1 cut(s) 1512
LmnI GCTCC 5 cut(s) 566, 787, 826, 1090, 1359
Lsp1109I GCAGC 5 cut(s) 340, 1327, 1360, 1382, 1492
MaeI CTAG 4 cut(s) 795, 1436, 1523, 1567
MaeIII GTNAC 2 cut(s) 724, 1223
MalI GATC 8 cut(s) 45, 338, 480, 555, 840, 1165, 1444, 1565
MboI GATC 8 cut(s) 43, 336, 478, 553, 838, 1163, 1442, 1563
MflI RGATCY 1 cut(s) 1442
MlsI TGGCCA 1 cut(s) 294
MluCI AATT 8 cut(s) 149, 303, 387, 675, 861, 1121, 1133, 1468
MluNI TGGCCA 1 cut(s) 294
MlyI GAGTC 2 cut(s) 48, 1013
MmeI TCCRAC 2 cut(s) 341, 363
MnlI CCTC 9 cut(s) 25, 324, 390, 598, 604, 619, 774, 1407, 1454
Mox20I TGGCCA 1 cut(s) 294
Mph1103I ATGCAT 2 cut(s) 460, 634
MroXI GAANNNNTTC 1 cut(s) 903
MscI TGGCCA 1 cut(s) 294
MseI TTAA 3 cut(s) 282, 878, 1407
MslI CAYNNNNRTG 1 cut(s) 453
Msp20I TGGCCA 1 cut(s) 294
MspA1I CMGCKG 1 cut(s) 1373
MspI CCGG 2 cut(s) 227, 729
MspR9I CCNGG 2 cut(s) 227, 730
MwoI GCNNNNNNNGC 7 cut(s) 350, 362, 629, 671, 680, 908, 1445
NciI CCSGG 2 cut(s) 227, 730
NdeI CATATG 1 cut(s) 217
NdeII GATC 8 cut(s) 43, 336, 478, 553, 838, 1163, 1442, 1563
NlaIII CATG 7 cut(s) 103, 374, 458, 622, 695, 762, 1067
NlaIV GGNNCC 3 cut(s) 114, 828, 1456
NmuCI GTSAC 1 cut(s) 1223
NsiI ATGCAT 2 cut(s) 460, 634
PceI AGGCCT 1 cut(s) 1175
PciSI GCTCTTC 1 cut(s) 1512
PcsI WCGNNNNNNNCGW 1 cut(s) 78
PdmI GAANNNNTTC 1 cut(s) 903
PfeI GAWTC 3 cut(s) 20, 48, 710
PflMI CCANNNNNTGG 1 cut(s) 425
PkrI GCNGC 6 cut(s) 98, 355, 1342, 1372, 1375, 1507
Ple19I CGATCG 1 cut(s) 481
PleI GAGTC 2 cut(s) 48, 1012
PpsI GAGTC 2 cut(s) 48, 1012
PspN4I GGNNCC 3 cut(s) 114, 828, 1456
PspPI GGNCC 2 cut(s) 1018, 1454
PstI CTGCAG 1 cut(s) 1378
PstNI CAGNNNCTG 2 cut(s) 1373, 1445
PsuI RGATCY 1 cut(s) 1442
PvuI CGATCG 1 cut(s) 481
PvuII CAGCTG 1 cut(s) 1373
RsaI GTAC 1 cut(s) 1183
RsaNI GTAC 1 cut(s) 1182
RseI CAYNNNNRTG 1 cut(s) 453
SapI GCTCTTC 1 cut(s) 1512
SaqAI TTAA 3 cut(s) 282, 878, 1407
SatI GCNGC 6 cut(s) 97, 354, 1341, 1371, 1374, 1506
Sau3AI GATC 8 cut(s) 43, 336, 478, 553, 838, 1163, 1442, 1563
Sau96I GGNCC 2 cut(s) 1018, 1454
SchI GAGTC 2 cut(s) 48, 1013
ScrFI CCNGG 2 cut(s) 227, 730
SfcI CTRYAG 1 cut(s) 1374
SinI GGWCC 2 cut(s) 1018, 1454
SmiMI CAYNNNNRTG 1 cut(s) 453
SmlI CTYRAG 2 cut(s) 657, 999
SmoI CTYRAG 2 cut(s) 657, 999
Sse9I AATT 8 cut(s) 149, 303, 387, 675, 861, 1121, 1133, 1468
SseBI AGGCCT 1 cut(s) 1175
SsiI CCGC 1 cut(s) 96
SspI AATATT 1 cut(s) 1499
SspMI CTAG 4 cut(s) 795, 1436, 1523, 1567
StuI AGGCCT 1 cut(s) 1175
StyD4I CCNGG 2 cut(s) 225, 728
StyI CCWWGG 2 cut(s) 1008, 1477
TaaI ACNGT 9 cut(s) 188, 381, 542, 688, 745, 923, 1042, 1229, 1319
TaqI TCGA 5 cut(s) 46, 75, 477, 803, 1412
TaqII GACCGA 1 cut(s) 1281
TasI AATT 8 cut(s) 149, 303, 387, 675, 861, 1121, 1133, 1468
TauI GCSGC 1 cut(s) 99
TfiI GAWTC 3 cut(s) 20, 48, 710
Tru1I TTAA 3 cut(s) 282, 878, 1407
Tru9I TTAA 3 cut(s) 282, 878, 1407
TscAI CASTG 4 cut(s) 30, 193, 547, 1383
TseFI GTSAC 1 cut(s) 1223
TseI GCWGC 5 cut(s) 353, 1340, 1370, 1373, 1505
Tsp45I GTSAC 1 cut(s) 1223
TspDTI ATGAA 6 cut(s) 246, 443, 862, 1052, 1248, 1530
TspGWI ACGGA 1 cut(s) 525
TspRI CASTG 4 cut(s) 30, 193, 547, 1383
Van91I CCANNNNNTGG 1 cut(s) 425
VpaK11BI GGWCC 2 cut(s) 1018, 1454
XapI RAATTY 4 cut(s) 149, 1121, 1133, 1468
XmnI GAANNNNTTC 1 cut(s) 903
XspI CTAG 4 cut(s) 795, 1436, 1523, 1567
Zsp2I ATGCAT 2 cut(s) 460, 634
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.