Belongs to the RecA family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G10140 |
| fragaria_vesca | FvH4_6g24630 FvH4_6g24630 FvH4_6g24630 FvH4_6g24630 |
| malus_domestica | MD08G1164600.v1.1 |
| prunus_persica | Prupe.7G052200_v2.0.a1 |
| pyrus_communis | pycom12654g00020 |
| rosa_chinensis | RchiOBHm_Chr3g0483971 |
| rosa_laevigata | RLG00000015036 RLG00000023245 RLG00000030551 RLG00000032361 |
| rosa_multiflora | Rmu_sc0001190.1_g000001 Rmu_sc0001527.1_g000019 Rmu_sc0003477.1_g000015 Rmu_sc0020880.1_g000007 Rmu_ssc0000295.1_g000053 |
| rosa_roxburghii | Rroxscaffold_6G00397920 |
| rosa_rugosa | Rorug03G0209800 |
| rosa_samantha | Rh3AG258000 Rh3BG295100 Rh3CG292500 Rh3DG288200 Rh6AG313300 |
| rosa_wichuraiana | Rw6G027080 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 159, 758 |
| AarI | CACCTGC | 1 cut(s) | 958 |
| Acc16I | TGCGCA | 1 cut(s) | 454 |
| Acc36I | ACCTGC | 1 cut(s) | 958 |
| AccB1I | GGYRCC | 1 cut(s) | 946 |
| AccI | GTMKAC | 1 cut(s) | 570 |
| AccII | CGCG | 1 cut(s) | 271 |
| AciI | CCGC | 5 cut(s) | 32, 269, 271, 588, 1103 |
| AclWI | GGATC | 3 cut(s) | 765, 1046, 1160 |
| AcsI | RAATTY | 2 cut(s) | 372, 714 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 214, 785 |
| AflII | CTTAAG | 1 cut(s) | 884 |
| AflIII | ACRYGT | 1 cut(s) | 1078 |
| AgsI | TTSAA | 2 cut(s) | 319, 371 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 129 |
| AjnI | CCWGG | 1 cut(s) | 284 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 926, 958 |
| AluBI | AGCT | 6 cut(s) | 322, 431, 439, 623, 646, 965 |
| AluI | AGCT | 6 cut(s) | 322, 431, 439, 623, 646, 965 |
| Alw21I | GWGCWC | 1 cut(s) | 295 |
| Alw26I | GTCTC | 1 cut(s) | 88 |
| AlwI | GGATC | 3 cut(s) | 765, 1046, 1160 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1114 |
| Ama87I | CYCGRG | 1 cut(s) | 335 |
| AoxI | GGCC | 1 cut(s) | 330 |
| ApeKI | GCWGC | 3 cut(s) | 203, 623, 848 |
| ApoI | RAATTY | 2 cut(s) | 372, 714 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 668, 700 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 522 |
| AspLEI | GCGC | 3 cut(s) | 37, 151, 455 |
| AspS9I | GGNCC | 5 cut(s) | 331, 339, 481, 631, 800 |
| AsuHPI | GGTGA | 2 cut(s) | 808, 943 |
| AsuII | TTCGAA | 1 cut(s) | 1173 |
| AvaI | CYCGRG | 1 cut(s) | 335 |
| AvaII | GGWCC | 4 cut(s) | 339, 481, 631, 800 |
| BaeGI | GKGCMC | 1 cut(s) | 249 |
| BanI | GGYRCC | 1 cut(s) | 946 |
| BbsI | GAAGAC | 2 cut(s) | 118, 1081 |
| Bbv12I | GWGCWC | 1 cut(s) | 295 |
| BbvI | GCAGC | 3 cut(s) | 190, 610, 860 |
| BccI | CCATC | 1 cut(s) | 1138 |
| BciT130I | CCWGG | 1 cut(s) | 286 |
| BciVI | GTATCC | 1 cut(s) | 969 |
| BcoDI | GTCTC | 1 cut(s) | 88 |
| BfoI | RGCGCY | 1 cut(s) | 38 |
| BfrI | CTTAAG | 1 cut(s) | 884 |
| BfuAI | ACCTGC | 1 cut(s) | 958 |
| BfuI | GTATCC | 1 cut(s) | 969 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 234 |
| BglII | AGATCT | 1 cut(s) | 1180 |
| BisI | GCNGC | 5 cut(s) | 33, 204, 269, 624, 849 |
| BlsI | GCNGC | 5 cut(s) | 34, 205, 270, 625, 850 |
| Bme1390I | CCNGG | 1 cut(s) | 286 |
| Bme18I | GGWCC | 4 cut(s) | 339, 481, 631, 800 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 129 |
| BmeT110I | CYCGRG | 1 cut(s) | 335 |
| BmgT120I | GGNCC | 5 cut(s) | 331, 339, 481, 631, 800 |
| BmiI | GGNNCC | 7 cut(s) | 313, 340, 483, 592, 633, 802, 948 |
| BmrFI | CCNGG | 1 cut(s) | 286 |
| BmrI | ACTGGG | 2 cut(s) | 631, 871 |
| BmsI | GCATC | 3 cut(s) | 169, 190, 398 |
| BmuI | ACTGGG | 2 cut(s) | 631, 871 |
| BpiI | GAAGAC | 2 cut(s) | 118, 1081 |
| Bpu14I | TTCGAA | 1 cut(s) | 1173 |
| BpuEI | CTTGAG | 2 cut(s) | 723, 1177 |
| BsaJI | CCNNGG | 6 cut(s) | 269, 284, 334, 354, 594, 804 |
| BsaWI | WCCGGW | 1 cut(s) | 341 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 214, 785 |
| Bse1I | ACTGG | 4 cut(s) | 313, 637, 774, 877 |
| Bse3DI | GCAATG | 3 cut(s) | 263, 960, 1041 |
| BseBI | CCWGG | 1 cut(s) | 286 |
| BseDI | CCNNGG | 6 cut(s) | 269, 284, 334, 354, 594, 804 |
| BseGI | GGATG | 3 cut(s) | 469, 604, 814 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 214, 785 |
| BseMI | GCAATG | 3 cut(s) | 263, 960, 1041 |
| BseMII | CTCAG | 5 cut(s) | 446, 695, 798, 882, 999 |
| BseNI | ACTGG | 4 cut(s) | 313, 637, 774, 877 |
| BseRI | GAGGAG | 2 cut(s) | 58, 114 |
| BseSI | GKGCMC | 1 cut(s) | 249 |
| BseXI | GCAGC | 3 cut(s) | 190, 610, 860 |
| BsgI | GTGCAG | 2 cut(s) | 471, 1169 |
| Bsh1236I | CGCG | 1 cut(s) | 271 |
| BshFI | GGCC | 1 cut(s) | 332 |
| BshNI | GGYRCC | 1 cut(s) | 946 |
| BsiHKAI | GWGCWC | 1 cut(s) | 295 |
| BsiHKCI | CYCGRG | 1 cut(s) | 335 |
| BsiSI | CCGG | 1 cut(s) | 342 |
| BslFI | GGGAC | 2 cut(s) | 352, 617 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 214, 785 |
| BsmAI | GTCTC | 1 cut(s) | 88 |
| BsmFI | GGGAC | 2 cut(s) | 352, 617 |
| BsmI | GAATGC | 2 cut(s) | 211, 478 |
| BsnI | GGCC | 1 cut(s) | 332 |
| BsoBI | CYCGRG | 1 cut(s) | 335 |
| Bsp119I | TTCGAA | 1 cut(s) | 1173 |
| Bsp1286I | GDGCHC | 2 cut(s) | 249, 295 |
| Bsp143I | GATC | 7 cut(s) | 325, 770, 900, 967, 1038, 1152, 1180 |
| BspACI | CCGC | 5 cut(s) | 32, 269, 271, 588, 1103 |
| BspANI | GGCC | 1 cut(s) | 332 |
| BspCNI | CTCAG | 5 cut(s) | 445, 694, 797, 883, 1000 |
| BspFNI | CGCG | 1 cut(s) | 271 |
| BspLI | GGNNCC | 7 cut(s) | 313, 340, 483, 592, 633, 802, 948 |
| BspMI | ACCTGC | 1 cut(s) | 958 |
| BspPI | GGATC | 3 cut(s) | 765, 1046, 1160 |
| BspT104I | TTCGAA | 1 cut(s) | 1173 |
| BspT107I | GGYRCC | 1 cut(s) | 946 |
| BspTI | CTTAAG | 1 cut(s) | 884 |
| BsrDI | GCAATG | 3 cut(s) | 263, 960, 1041 |
| BsrI | ACTGG | 4 cut(s) | 313, 637, 774, 877 |
| BssECI | CCNNGG | 6 cut(s) | 269, 284, 334, 354, 594, 804 |
| BssMI | GATC | 7 cut(s) | 325, 770, 900, 967, 1038, 1152, 1180 |
| BssT1I | CCWWGG | 2 cut(s) | 354, 594 |
| Bst2UI | CCWGG | 1 cut(s) | 286 |
| Bst4CI | ACNGT | 3 cut(s) | 20, 1110, 1190 |
| Bst6I | CTCTTC | 1 cut(s) | 61 |
| BstAFI | CTTAAG | 1 cut(s) | 884 |
| BstBI | TTCGAA | 1 cut(s) | 1173 |
| BstC8I | GCNNGC | 2 cut(s) | 291, 408 |
| BstDEI | CTNAG | 6 cut(s) | 432, 681, 707, 784, 891, 1008 |
| BstDSI | CCRYGG | 2 cut(s) | 269, 804 |
| BstEII | GGTNACC | 1 cut(s) | 814 |
| BstF5I | GGATG | 3 cut(s) | 469, 604, 814 |
| BstFNI | CGCG | 1 cut(s) | 271 |
| BstH2I | RGCGCY | 1 cut(s) | 38 |
| BstHHI | GCGC | 3 cut(s) | 37, 151, 455 |
| BstKTI | GATC | 7 cut(s) | 328, 773, 903, 970, 1041, 1155, 1183 |
| BstMAI | GTCTC | 1 cut(s) | 88 |
| BstMBI | GATC | 7 cut(s) | 325, 770, 900, 967, 1038, 1152, 1180 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 234 |
| BstNI | CCWGG | 1 cut(s) | 286 |
| BstNSI | RCATGY | 1 cut(s) | 1082 |
| BstPI | GGTNACC | 1 cut(s) | 814 |
| BstSCI | CCNGG | 1 cut(s) | 284 |
| BstSLI | GKGCMC | 1 cut(s) | 249 |
| BstUI | CGCG | 1 cut(s) | 271 |
| BstV1I | GCAGC | 3 cut(s) | 190, 610, 860 |
| BstV2I | GAAGAC | 2 cut(s) | 118, 1081 |
| BstX2I | RGATCY | 3 cut(s) | 770, 1152, 1180 |
| BstYI | RGATCY | 3 cut(s) | 770, 1152, 1180 |
| BsuI | GTATCC | 1 cut(s) | 969 |
| BsuRI | GGCC | 1 cut(s) | 332 |
| BtgI | CCRYGG | 2 cut(s) | 269, 804 |
| BtsCI | GGATG | 3 cut(s) | 469, 604, 814 |
| BtsI | GCAGTG | 1 cut(s) | 483 |
| BtsIMutI | CAGTG | 3 cut(s) | 306, 483, 644 |
| BveI | ACCTGC | 1 cut(s) | 958 |
| Cac8I | GCNNGC | 2 cut(s) | 291, 408 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1114 |
| CfoI | GCGC | 3 cut(s) | 37, 151, 455 |
| Cfr13I | GGNCC | 5 cut(s) | 331, 339, 481, 631, 800 |
| Cfr42I | CCGCGG | 1 cut(s) | 272 |
| CviAII | CATG | 4 cut(s) | 80, 256, 1034, 1079 |
| DdeI | CTNAG | 6 cut(s) | 432, 681, 707, 784, 891, 1008 |
| DpnI | GATC | 7 cut(s) | 327, 772, 902, 969, 1040, 1154, 1182 |
| DpnII | GATC | 7 cut(s) | 325, 770, 900, 967, 1038, 1152, 1180 |
| DriI | GACNNNNNGTC | 1 cut(s) | 129 |
| Eam1104I | CTCTTC | 1 cut(s) | 61 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 129 |
| EarI | CTCTTC | 1 cut(s) | 61 |
| Eco130I | CCWWGG | 2 cut(s) | 354, 594 |
| Eco47I | GGWCC | 4 cut(s) | 339, 481, 631, 800 |
| Eco88I | CYCGRG | 1 cut(s) | 335 |
| Eco91I | GGTNACC | 1 cut(s) | 814 |
| EcoO65I | GGTNACC | 1 cut(s) | 814 |
| EcoRII | CCWGG | 1 cut(s) | 284 |
| EcoT14I | CCWWGG | 2 cut(s) | 354, 594 |
| ErhI | CCWWGG | 2 cut(s) | 354, 594 |
| FaeI | CATG | 4 cut(s) | 83, 259, 1037, 1082 |
| FaqI | GGGAC | 2 cut(s) | 352, 617 |
| FatI | CATG | 4 cut(s) | 79, 255, 1033, 1078 |
| FblI | GTMKAC | 1 cut(s) | 570 |
| Fnu4HI | GCNGC | 5 cut(s) | 33, 204, 269, 624, 849 |
| FokI | GGATG | 3 cut(s) | 476, 611, 821 |
| Fsp4HI | GCNGC | 5 cut(s) | 33, 204, 269, 624, 849 |
| FspI | TGCGCA | 1 cut(s) | 454 |
| GlaI | GCGC | 3 cut(s) | 36, 150, 454 |
| GluI | GCNGC | 5 cut(s) | 33, 204, 269, 624, 849 |
| HaeII | RGCGCY | 1 cut(s) | 38 |
| HaeIII | GGCC | 1 cut(s) | 332 |
| HapII | CCGG | 1 cut(s) | 342 |
| HhaI | GCGC | 3 cut(s) | 37, 151, 455 |
| Hin1II | CATG | 4 cut(s) | 83, 259, 1037, 1082 |
| Hin6I | GCGC | 3 cut(s) | 35, 149, 453 |
| HinP1I | GCGC | 3 cut(s) | 35, 149, 453 |
| HincII | GTYRAC | 1 cut(s) | 571 |
| HindII | GTYRAC | 1 cut(s) | 571 |
| HindIII | AAGCTT | 2 cut(s) | 320, 437 |
| HinfI | GANTC | 3 cut(s) | 251, 840, 1004 |
| HpaII | CCGG | 1 cut(s) | 342 |
| HphI | GGTGA | 2 cut(s) | 808, 943 |
| Hpy166II | GTNNAC | 4 cut(s) | 481, 511, 571, 1031 |
| Hpy188I | TCNGA | 2 cut(s) | 435, 1009 |
| Hpy188III | TCNNGA | 4 cut(s) | 337, 461, 687, 1156 |
| Hpy8I | GTNNAC | 4 cut(s) | 481, 511, 571, 1031 |
| Hpy99I | CGWCG | 1 cut(s) | 127 |
| HpyAV | CCTTC | 3 cut(s) | 82, 533, 1046 |
| HpyCH4III | ACNGT | 3 cut(s) | 20, 1110, 1190 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 234 |
| HpyF3I | CTNAG | 6 cut(s) | 432, 681, 707, 784, 891, 1008 |
| Hsp92II | CATG | 4 cut(s) | 83, 259, 1037, 1082 |
| HspAI | GCGC | 3 cut(s) | 35, 149, 453 |
| KspI | CCGCGG | 1 cut(s) | 272 |
| Kzo9I | GATC | 7 cut(s) | 325, 770, 900, 967, 1038, 1152, 1180 |
| LmnI | GCTCC | 1 cut(s) | 298 |
| Lsp1109I | GCAGC | 3 cut(s) | 190, 610, 860 |
| LweI | GCATC | 3 cut(s) | 169, 190, 398 |
| MaeIII | GTNAC | 2 cut(s) | 6, 814 |
| MalI | GATC | 7 cut(s) | 327, 772, 902, 969, 1040, 1154, 1182 |
| MboI | GATC | 7 cut(s) | 325, 770, 900, 967, 1038, 1152, 1180 |
| MfeI | CAATTG | 2 cut(s) | 657, 1019 |
| MflI | RGATCY | 3 cut(s) | 770, 1152, 1180 |
| MhlI | GDGCHC | 2 cut(s) | 249, 295 |
| MluCI | AATT | 9 cut(s) | 363, 372, 541, 603, 657, 714, 941, 980, 1019 |
| MroXI | GAANNNNTTC | 1 cut(s) | 522 |
| MseI | TTAA | 3 cut(s) | 728, 860, 885 |
| MspA1I | CMGCKG | 2 cut(s) | 271, 1103 |
| MspCI | CTTAAG | 1 cut(s) | 884 |
| MspI | CCGG | 1 cut(s) | 342 |
| MspR9I | CCNGG | 1 cut(s) | 286 |
| MunI | CAATTG | 2 cut(s) | 657, 1019 |
| Mva1269I | GAATGC | 2 cut(s) | 211, 478 |
| MvaI | CCWGG | 1 cut(s) | 286 |
| MvnI | CGCG | 1 cut(s) | 271 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 234 |
| NdeII | GATC | 7 cut(s) | 325, 770, 900, 967, 1038, 1152, 1180 |
| NlaIII | CATG | 4 cut(s) | 83, 259, 1037, 1082 |
| NlaIV | GGNNCC | 7 cut(s) | 313, 340, 483, 592, 633, 802, 948 |
| NmuCI | GTSAC | 1 cut(s) | 814 |
| NsbI | TGCGCA | 1 cut(s) | 454 |
| NspI | RCATGY | 1 cut(s) | 1082 |
| NspV | TTCGAA | 1 cut(s) | 1173 |
| PaqCI | CACCTGC | 1 cut(s) | 958 |
| PciI | ACATGT | 1 cut(s) | 1078 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 286 |
| PctI | GAATGC | 2 cut(s) | 211, 478 |
| PdmI | GAANNNNTTC | 1 cut(s) | 522 |
| PfeI | GAWTC | 3 cut(s) | 251, 840, 1004 |
| PkrI | GCNGC | 5 cut(s) | 34, 205, 270, 625, 850 |
| PscI | ACATGT | 1 cut(s) | 1078 |
| PsiI | TTATAA | 2 cut(s) | 159, 758 |
| Psp6I | CCWGG | 1 cut(s) | 284 |
| PspEI | GGTNACC | 1 cut(s) | 814 |
| PspGI | CCWGG | 1 cut(s) | 284 |
| PspN4I | GGNNCC | 7 cut(s) | 313, 340, 483, 592, 633, 802, 948 |
| PspPI | GGNCC | 5 cut(s) | 331, 339, 481, 631, 800 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1114 |
| PsuI | RGATCY | 3 cut(s) | 770, 1152, 1180 |
| SacII | CCGCGG | 1 cut(s) | 272 |
| SalI | GTCGAC | 1 cut(s) | 569 |
| SaqAI | TTAA | 3 cut(s) | 728, 860, 885 |
| SatI | GCNGC | 5 cut(s) | 33, 204, 269, 624, 849 |
| Sau3AI | GATC | 7 cut(s) | 325, 770, 900, 967, 1038, 1152, 1180 |
| Sau96I | GGNCC | 5 cut(s) | 331, 339, 481, 631, 800 |
| ScrFI | CCNGG | 1 cut(s) | 286 |
| SduI | GDGCHC | 2 cut(s) | 249, 295 |
| SfaNI | GCATC | 3 cut(s) | 169, 190, 398 |
| Sfr303I | CCGCGG | 1 cut(s) | 272 |
| SfuI | TTCGAA | 1 cut(s) | 1173 |
| SgrBI | CCGCGG | 1 cut(s) | 272 |
| SinI | GGWCC | 4 cut(s) | 339, 481, 631, 800 |
| SmlI | CTYRAG | 3 cut(s) | 738, 884, 1156 |
| SmoI | CTYRAG | 3 cut(s) | 738, 884, 1156 |
| Sse9I | AATT | 9 cut(s) | 363, 372, 541, 603, 657, 714, 941, 980, 1019 |
| SsiI | CCGC | 5 cut(s) | 32, 269, 271, 588, 1103 |
| StyD4I | CCNGG | 1 cut(s) | 284 |
| StyI | CCWWGG | 2 cut(s) | 354, 594 |
| TaaI | ACNGT | 3 cut(s) | 20, 1110, 1190 |
| TaqI | TCGA | 3 cut(s) | 570, 856, 1173 |
| TasI | AATT | 9 cut(s) | 363, 372, 541, 603, 657, 714, 941, 980, 1019 |
| TauI | GCSGC | 2 cut(s) | 35, 271 |
| TfiI | GAWTC | 3 cut(s) | 251, 840, 1004 |
| Tru1I | TTAA | 3 cut(s) | 728, 860, 885 |
| Tru9I | TTAA | 3 cut(s) | 728, 860, 885 |
| TscAI | CASTG | 3 cut(s) | 313, 483, 644 |
| TseFI | GTSAC | 1 cut(s) | 814 |
| TseI | GCWGC | 3 cut(s) | 203, 623, 848 |
| Tsp45I | GTSAC | 1 cut(s) | 814 |
| TspDTI | ATGAA | 3 cut(s) | 707, 971, 1107 |
| TspRI | CASTG | 3 cut(s) | 313, 483, 644 |
| Vha464I | CTTAAG | 1 cut(s) | 884 |
| VpaK11BI | GGWCC | 4 cut(s) | 339, 481, 631, 800 |
| XapI | RAATTY | 2 cut(s) | 372, 714 |
| XceI | RCATGY | 1 cut(s) | 1082 |
| XmiI | GTMKAC | 1 cut(s) | 570 |
| XmnI | GAANNNNTTC | 1 cut(s) | 522 |