Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0006670

Physical Location & Seq

Genomic Coordinates Reverse (-)

18698734 .. 18701699

Gene Structure 2966 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0209800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1806 bp

ATGTCTTTGTTTATTGGCAATCTATCAGCTCGCACCCGCGGAGATGATCTTCAGCGTGTCTTTAGGAAGTTTGGACAATGTATGTTAAATCTGAAAGATCGCTATGGGTTTGTAGTATATGATTTCCCGCAAGATGCTGAGAATGCTTTAAGAGCACTACAGGGTAGGAATGTCTGTGGGGAGCCTTTAATACTAACATGGTCAAAAAAGCAGCCTATACCTTTCCAGGGACATCAAAGAGTTGTTAGATCCTACGCGTTACATGGGAGGCATTCTGCCAGGAGGAGAGGTTTTGCTAGTAGAAGAATGAGTTCAAATGACTGGAGAGATTACAGATCGGATATAAATCAACCAGATACTGATGGTGAAAAGCTTGGTTCTGTGTATATGCTCAATGGAGGCAGAGGTGACCCTAACAAGTATGCTAATGATGATGGTAGAGAACATCATGATTTGACGGAAGGTCTGCCGGTTGATGGTGTTGCCAAACTGGTGGACACTGCCAATCAGATTGATAATGAGGTGGAATTTGACAGATATGAACCTTCCCAAAGTCATGAAGGGGAAGATGAACATGAAAACTGTCAGATGGCATATTCTGGTTGTGGTTCTGTTCCACAAAGACCTCAAGAGAATGCAAGGACAGTGAAGATCAGTGACACTACTTTGAACCGTTTTAATGATTTAAAGTCGCAGAATGGTTGCTTCAGCTGTGGGGATTTGGGACACAAGATCCGTGACTGTCCCAGAAAATACTCATCCGGAAGAAAGCCTAAAAGGTTTGACCATAGGCAGCATGATGCCATTGGTAAAATTAGTAGTGGTGAAGCTGAACTAGAAAGGTTTGGATCCATCTCATTGGAGAAGCTGCGGTTGAATAAGGATAGTGCTTCTGGGCACAGGAAGAGTATGAGGGCAAGTGATTCAGGAAAGAGTAAGGCAACTGACAGGACCCAAATGAAGGATCGTGGAGGAAAGAAGAGAAGTAGATGGGAAGGCGAATCTCCAAAAAGGCATAGTCCTAAGAAAGCAAGGTCAGTTTTATCACCACCTCATTCTGATTACCCTGCATCCAAGTCTTGTGCAGCTTCTCAATCATCAGAGTCTGTGTCAAGGTGTAGTAGTTCCAGAGCTGGGTCACAATCAGTATTTATGAGGGCACAGTCCTTGTCATCTGACTCAAGATCCAGCTCAAAATTGATAAGGTCCAAGTCTAGGTCAAGGTCAAGCTCCTTTACTTCATCGTCTGAATCACTAAGCCGATCATCATATAAGGCACATGTAGATCTTAAATGCCCTGTGTATAAAACTAAAACTCCCAAATCCAAGGAGATTCTGCTTGAGAAGAGACAGCCAATAGGAGGTGATGCCCAGAGGGTTCAAAATCCAGGTTCTGATGCTGCTGGGTGTTCGTCTGCACAGGGTTCAAAAGAGAAGGTTGATCCAGAAAATTCTGGTGGACTGGTTGTGGGGGAAGCTCATTTGAAGGAGCCAGCTTCAGAAATGCACGTCAATTATTGCAATGGCAATTCAACATGCATATCCTCAGAGGAAATGTGCATGGTTTTGAAGCACCATGGCATGGAACTTCCGGAAGAAAGTGAAAGGCATTTACCGATAGAGGAGTATCTTGGTTCTGCTCGCCTTTGGCCATGGGAGATCATCTATTACAGGAGGCTGAAAAAAGGCCTCGTTTCGGTTGAGAACTATGCCAGGCGAGTTTCTCAGAACCAAGAGTTTGGCATCATTGATAAGTACGTCCGAAGTAGTAGTGGATGGGGAGAAATAGATGAGGAAAACCCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000002 GO:0000150 GO:0000217 GO:0000400 GO:0000724 GO:0000725 GO:0000730 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003697 GO:0003824 GO:0005488 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006310 GO:0006312 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007005 GO:0008094 GO:0008150 GO:0008152 GO:0009266 GO:0009314 GO:0009408 GO:0009628 GO:0009987 GO:0010212 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022607 GO:0033554 GO:0034622 GO:0034641 GO:0042148 GO:0042623 GO:0043170 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0045003 GO:0046483 GO:0050896 GO:0051716 GO:0065003 GO:0065004 GO:0071704 GO:0071824 GO:0071840 GO:0090304 GO:0090735 GO:0097159 GO:0140097 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Glyco_hydro_17 RecA

Protein Analysis

601

Amino Acids

67.32

Weight (kDa)

9.21

Isoelectric Point (pI)

60.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	3 - 62	1e-08	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006670)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G10140
fragaria_vesca	FvH4_6g24630 FvH4_6g24630 FvH4_6g24630 FvH4_6g24630
malus_domestica	MD08G1164600.v1.1
prunus_persica	Prupe.7G052200_v2.0.a1
pyrus_communis	pycom12654g00020
rosa_chinensis	RchiOBHm_Chr3g0483971
rosa_laevigata	RLG00000015036 RLG00000023245 RLG00000030551 RLG00000032361
rosa_multiflora	Rmu_sc0001190.1_g000001 Rmu_sc0001527.1_g000019 Rmu_sc0003477.1_g000015 Rmu_sc0020880.1_g000007 Rmu_ssc0000295.1_g000053
rosa_roxburghii	Rroxscaffold_6G00397920
rosa_rugosa	Rorug03G0209800
rosa_samantha	Rh3AG258000 Rh3BG295100 Rh3CG292500 Rh3DG288200 Rh6AG313300
rosa_wichuraiana	Rw6G027080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	1582
AccII	CGCG	2 cut(s)	39, 257
AccIII	TCCGGA	2 cut(s)	761, 1591
AciI	CCGC	4 cut(s)	37, 39, 128, 871
AclWI	GGATC	7 cut(s)	243, 727, 843, 856, 972, 1179, 1436
AcoI	YGGCCR	1 cut(s)	1649
AcsI	RAATTY	2 cut(s)	527, 1450
AcuI	CTGAAG	3 cut(s)	35, 691, 1482
AfaI	GTAC	1 cut(s)	1757
AfiI	CCNNNNNNNGG	8 cut(s)	227, 476, 961, 1134, 1215, 1361, 1582, 1696
AflIII	ACRYGT	2 cut(s)	255, 1279
AgsI	TTSAA	8 cut(s)	315, 670, 877, 1382, 1428, 1486, 1533, 1570
AhdI	GACNNNNNGTC	1 cut(s)	462
AjiI	CACGTC	1 cut(s)	1510
AjnI	CCWGG	4 cut(s)	225, 278, 1387, 1712
Alw21I	GWGCWC	1 cut(s)	157
Alw26I	GTCTC	1 cut(s)	1342
AlwI	GGATC	7 cut(s)	243, 727, 843, 856, 972, 1179, 1436
AlwNI	CAGNNNCTG	3 cut(s)	359, 1106, 1394
Aor13HI	TCCGGA	2 cut(s)	761, 1591
AoxI	GGCC	2 cut(s)	1649, 1687
ApeKI	GCWGC	5 cut(s)	211, 793, 868, 1085, 1400
ApoI	RAATTY	2 cut(s)	527, 1450
Asp700I	GAANNNNTTC	1 cut(s)	310
AspS9I	GGNCC	2 cut(s)	951, 1206
AsuHPI	GGTGA	5 cut(s)	377, 419, 836, 1038, 1376
AvaII	GGWCC	2 cut(s)	951, 1206
BaeGI	GKGCMC	2 cut(s)	900, 1162
BalI	TGGCCA	1 cut(s)	1651
BamHI	GGATCC	1 cut(s)	848
Bbv12I	GWGCWC	1 cut(s)	157
BbvI	GCAGC	5 cut(s)	223, 805, 855, 1097, 1387
BccI	CCATC	7 cut(s)	356, 428, 470, 583, 860, 984, 1770
BciT130I	CCWGG	4 cut(s)	227, 280, 1389, 1714
BcoDI	GTCTC	1 cut(s)	1342
BfaI	CTAG	3 cut(s)	297, 836, 1215
BfmI	CTRYAG	1 cut(s)	158
BglII	AGATCT	1 cut(s)	1285
BisI	GCNGC	5 cut(s)	212, 794, 869, 1086, 1401
BlsI	GCNGC	5 cut(s)	213, 795, 870, 1087, 1402
Bme1390I	CCNGG	4 cut(s)	227, 280, 1389, 1714
Bme18I	GGWCC	2 cut(s)	951, 1206
BmeRI	GACNNNNNGTC	1 cut(s)	462
BmgBI	CACGTC	1 cut(s)	1510
BmgT120I	GGNCC	2 cut(s)	951, 1206
BmiI	GGNNCC	4 cut(s)	183, 850, 953, 1491
BmrFI	CCNGG	4 cut(s)	227, 280, 1389, 1714
BmsI	GCATC	6 cut(s)	124, 790, 1079, 1357, 1387, 1752
BpmI	CTGGAG	1 cut(s)	343
BpuEI	CTTGAG	3 cut(s)	612, 1165, 1361
BsaBI	GATNNNNATC	1 cut(s)	345
BsaJI	CCNNGG	5 cut(s)	37, 226, 1326, 1576, 1652
BsaWI	WCCGGW	2 cut(s)	761, 1591
BsaXI	ACNNNNNCTCC	4 cut(s)	274, 304, 1300, 1330
Bsc4I	CCNNNNNNNGG	8 cut(s)	227, 476, 961, 1134, 1215, 1361, 1582, 1696
Bse118I	RCCGGY	1 cut(s)	469
Bse1I	ACTGG	3 cut(s)	326, 495, 1467
Bse3DI	GCAATG	1 cut(s)	1528
Bse8I	GATNNNNATC	1 cut(s)	345
BseAI	TCCGGA	2 cut(s)	761, 1591
BseBI	CCWGG	4 cut(s)	227, 280, 1389, 1714
BseDI	CCNNGG	5 cut(s)	37, 226, 1326, 1576, 1652
BseGI	GGATG	3 cut(s)	758, 1070, 1781
BseJI	GATNNNNATC	1 cut(s)	345
BseLI	CCNNNNNNNGG	8 cut(s)	227, 476, 961, 1134, 1215, 1361, 1582, 1696
BseMI	GCAATG	1 cut(s)	1528
BseMII	CTCAG	3 cut(s)	129, 1560, 1739
BseNI	ACTGG	3 cut(s)	326, 495, 1467
BseRI	GAGGAG	2 cut(s)	298, 1637
BseSI	GKGCMC	2 cut(s)	900, 1162
BseXI	GCAGC	5 cut(s)	223, 805, 855, 1097, 1387
BseYI	CCCAGC	2 cut(s)	1133, 1403
BsgI	GTGCAG	2 cut(s)	1104, 1401
Bsh1236I	CGCG	2 cut(s)	39, 257
BshFI	GGCC	2 cut(s)	1651, 1689
BsiHKAI	GWGCWC	1 cut(s)	157
BsiSI	CCGG	3 cut(s)	470, 762, 1592
BslFI	GGGAC	3 cut(s)	243, 729, 738
BslI	CCNNNNNNNGG	8 cut(s)	227, 476, 961, 1134, 1215, 1361, 1582, 1696
BsmAI	GTCTC	1 cut(s)	1342
BsmFI	GGGAC	3 cut(s)	243, 729, 738
BsmI	GAATGC	3 cut(s)	148, 271, 640
BsnI	GGCC	2 cut(s)	1651, 1689
Bsp1286I	GDGCHC	3 cut(s)	157, 900, 1162
Bsp13I	TCCGGA	2 cut(s)	761, 1591
Bsp19I	CCATGG	2 cut(s)	1576, 1652
BspACI	CCGC	4 cut(s)	37, 39, 128, 871
BspANI	GGCC	2 cut(s)	1651, 1689
BspCNI	CTCAG	3 cut(s)	130, 1559, 1738
BspEI	TCCGGA	2 cut(s)	761, 1591
BspFNI	CGCG	2 cut(s)	39, 257
BspHI	TCATGA	2 cut(s)	448, 556
BspLI	GGNNCC	4 cut(s)	183, 850, 953, 1491
BspPI	GGATC	7 cut(s)	243, 727, 843, 856, 972, 1179, 1436
BsrDI	GCAATG	1 cut(s)	1528
BsrFI	RCCGGY	1 cut(s)	469
BsrI	ACTGG	3 cut(s)	326, 495, 1467
BssAI	RCCGGY	1 cut(s)	469
BssECI	CCNNGG	5 cut(s)	37, 226, 1326, 1576, 1652
BssT1I	CCWWGG	3 cut(s)	1326, 1576, 1652
Bst2UI	CCWGG	4 cut(s)	227, 280, 1389, 1714
Bst4CI	ACNGT	5 cut(s)	584, 646, 674, 743, 1164
Bst6I	CTCTTC	3 cut(s)	899, 974, 1340
BstC8I	GCNNGC	3 cut(s)	31, 1494, 1642
BstDEI	CTNAG	5 cut(s)	138, 1023, 1256, 1546, 1725
BstDSI	CCRYGG	3 cut(s)	37, 1576, 1652
BstEII	GGTNACC	1 cut(s)	407
BstF5I	GGATG	3 cut(s)	758, 1070, 1781
BstFNI	CGCG	2 cut(s)	39, 257
BstMAI	GTCTC	1 cut(s)	1342
BstMWI	GCNNNNNNNGC	2 cut(s)	143, 152
BstNI	CCWGG	4 cut(s)	227, 280, 1389, 1714
BstNSI	RCATGY	2 cut(s)	1283, 1539
BstPI	GGTNACC	1 cut(s)	407
BstSCI	CCNGG	4 cut(s)	225, 278, 1387, 1712
BstSFI	CTRYAG	1 cut(s)	158
BstSLI	GKGCMC	2 cut(s)	900, 1162
BstUI	CGCG	2 cut(s)	39, 257
BstV1I	GCAGC	5 cut(s)	223, 805, 855, 1097, 1387
BstX2I	RGATCY	5 cut(s)	248, 732, 848, 1184, 1285
BstXI	CCANNNNNNTGG	3 cut(s)	493, 859, 1739
BstYI	RGATCY	5 cut(s)	248, 732, 848, 1184, 1285
BsuRI	GGCC	2 cut(s)	1651, 1689
BtgI	CCRYGG	3 cut(s)	37, 1576, 1652
BtrI	CACGTC	1 cut(s)	1510
BtsCI	GGATG	3 cut(s)	758, 1070, 1781
BtsI	GCAGTG	1 cut(s)	498
BtsIMutI	CAGTG	3 cut(s)	498, 651, 661
Cac8I	GCNNGC	3 cut(s)	31, 1494, 1642
CaiI	CAGNNNCTG	3 cut(s)	359, 1106, 1394
CciI	TCATGA	2 cut(s)	448, 556
Cfr10I	RCCGGY	1 cut(s)	469
Cfr13I	GGNCC	2 cut(s)	951, 1206
Cfr42I	CCGCGG	1 cut(s)	40
Csp6I	GTAC	1 cut(s)	1756
CviQI	GTAC	1 cut(s)	1756
DdeI	CTNAG	5 cut(s)	138, 1023, 1256, 1546, 1725
DraI	TTTAAA	1 cut(s)	687
DriI	GACNNNNNGTC	1 cut(s)	462
EaeI	YGGCCR	1 cut(s)	1649
Eam1104I	CTCTTC	3 cut(s)	899, 974, 1340
Eam1105I	GACNNNNNGTC	1 cut(s)	462
EarI	CTCTTC	3 cut(s)	899, 974, 1340
Eco130I	CCWWGG	3 cut(s)	1326, 1576, 1652
Eco147I	AGGCCT	1 cut(s)	1689
Eco47I	GGWCC	2 cut(s)	951, 1206
Eco57I	CTGAAG	3 cut(s)	35, 691, 1482
Eco91I	GGTNACC	1 cut(s)	407
EcoO109I	RGGNCCY	1 cut(s)	951
EcoO65I	GGTNACC	1 cut(s)	407
EcoRII	CCWGG	4 cut(s)	225, 278, 1387, 1712
EcoT14I	CCWWGG	3 cut(s)	1326, 1576, 1652
EcoT22I	ATGCAT	1 cut(s)	1541
ErhI	CCWWGG	3 cut(s)	1326, 1576, 1652
FaqI	GGGAC	3 cut(s)	243, 729, 738
FauI	CCCGC	2 cut(s)	44, 135
Fnu4HI	GCNGC	5 cut(s)	212, 794, 869, 1086, 1401
FokI	GGATG	3 cut(s)	745, 1057, 1788
Fsp4HI	GCNGC	5 cut(s)	212, 794, 869, 1086, 1401
FspBI	CTAG	3 cut(s)	297, 836, 1215
GluI	GCNGC	5 cut(s)	212, 794, 869, 1086, 1401
GsaI	CCCAGC	2 cut(s)	1137, 1407
GsuI	CTGGAG	1 cut(s)	343
HaeIII	GGCC	2 cut(s)	1651, 1689
HapII	CCGG	3 cut(s)	470, 762, 1592
HindIII	AAGCTT	1 cut(s)	371
HinfI	GANTC	6 cut(s)	923, 1001, 1103, 1178, 1250, 1333
HpaII	CCGG	3 cut(s)	470, 762, 1592
HphI	GGTGA	5 cut(s)	377, 419, 836, 1038, 1376
Hpy166II	GTNNAC	2 cut(s)	496, 1460
Hpy188III	TCNNGA	9 cut(s)	449, 557, 629, 762, 927, 1128, 1182, 1445, 1592
Hpy8I	GTNNAC	2 cut(s)	496, 1460
HpyAV	CCTTC	7 cut(s)	455, 554, 555, 955, 989, 1429, 1480
HpyCH4III	ACNGT	5 cut(s)	584, 646, 674, 743, 1164
HpyCH4IV	ACGT	2 cut(s)	1509, 1758
HpyCH4V	TGCA	8 cut(s)	638, 1070, 1085, 1418, 1507, 1521, 1539, 1560
HpyF10VI	GCNNNNNNNGC	2 cut(s)	143, 152
HpyF3I	CTNAG	5 cut(s)	138, 1023, 1256, 1546, 1725
HpySE526I	ACGT	2 cut(s)	1509, 1758
Kpn2I	TCCGGA	2 cut(s)	761, 1591
KspI	CCGCGG	1 cut(s)	40
LmnI	GCTCC	3 cut(s)	181, 1235, 1489
Lsp1109I	GCAGC	5 cut(s)	223, 805, 855, 1097, 1387
LweI	GCATC	6 cut(s)	124, 790, 1079, 1357, 1387, 1752
MaeI	CTAG	3 cut(s)	297, 836, 1215
MaeII	ACGT	2 cut(s)	1509, 1758
MaeIII	GTNAC	5 cut(s)	258, 407, 656, 737, 1137
MboII	GAAGA	9 cut(s)	41, 315, 578, 661, 777, 916, 991, 1357, 1607
MflI	RGATCY	5 cut(s)	248, 732, 848, 1184, 1285
MhlI	GDGCHC	3 cut(s)	157, 900, 1162
MlsI	TGGCCA	1 cut(s)	1651
MluCI	AATT	6 cut(s)	527, 813, 1196, 1450, 1513, 1528
MluI	ACGCGT	1 cut(s)	255
MluNI	TGGCCA	1 cut(s)	1651
MlyI	GAGTC	2 cut(s)	1112, 1172
Mox20I	TGGCCA	1 cut(s)	1651
Mph1103I	ATGCAT	1 cut(s)	1541
MroI	TCCGGA	2 cut(s)	761, 1591
MroXI	GAANNNNTTC	1 cut(s)	310
MscI	TGGCCA	1 cut(s)	1651
MseI	TTAA	6 cut(s)	86, 149, 188, 678, 686, 1290
Msp20I	TGGCCA	1 cut(s)	1651
MspA1I	CMGCKG	2 cut(s)	39, 711
MspI	CCGG	3 cut(s)	470, 762, 1592
MspR9I	CCNGG	4 cut(s)	227, 280, 1389, 1714
Mva1269I	GAATGC	3 cut(s)	148, 271, 640
MvaI	CCWGG	4 cut(s)	227, 280, 1389, 1714
MvnI	CGCG	2 cut(s)	39, 257
MwoI	GCNNNNNNNGC	2 cut(s)	143, 152
NcoI	CCATGG	2 cut(s)	1576, 1652
NlaIV	GGNNCC	4 cut(s)	183, 850, 953, 1491
NmuCI	GTSAC	4 cut(s)	407, 656, 737, 1137
NsiI	ATGCAT	1 cut(s)	1541
NspI	RCATGY	2 cut(s)	1283, 1539
PagI	TCATGA	2 cut(s)	448, 556
PceI	AGGCCT	1 cut(s)	1689
PciI	ACATGT	1 cut(s)	1279
PctI	GAATGC	3 cut(s)	148, 271, 640
PdmI	GAANNNNTTC	1 cut(s)	310
PfeI	GAWTC	4 cut(s)	923, 1001, 1250, 1333
PflMI	CCANNNNNTGG	1 cut(s)	1582
PkrI	GCNGC	5 cut(s)	213, 795, 870, 1087, 1402
PleI	GAGTC	2 cut(s)	1111, 1172
PpsI	GAGTC	2 cut(s)	1111, 1172
PpuMI	RGGWCCY	1 cut(s)	951
PscI	ACATGT	1 cut(s)	1279
Psp5II	RGGWCCY	1 cut(s)	951
Psp6I	CCWGG	4 cut(s)	225, 278, 1387, 1712
PspEI	GGTNACC	1 cut(s)	407
PspFI	CCCAGC	2 cut(s)	1133, 1403
PspGI	CCWGG	4 cut(s)	225, 278, 1387, 1712
PspN4I	GGNNCC	4 cut(s)	183, 850, 953, 1491
PspPI	GGNCC	2 cut(s)	951, 1206
PspPPI	RGGWCCY	1 cut(s)	951
PstNI	CAGNNNCTG	3 cut(s)	359, 1106, 1394
PsuI	RGATCY	5 cut(s)	248, 732, 848, 1184, 1285
PvuII	CAGCTG	1 cut(s)	711
RsaI	GTAC	1 cut(s)	1757
RsaNI	GTAC	1 cut(s)	1756
SacII	CCGCGG	1 cut(s)	40
SaqAI	TTAA	6 cut(s)	86, 149, 188, 678, 686, 1290
SatI	GCNGC	5 cut(s)	212, 794, 869, 1086, 1401
Sau96I	GGNCC	2 cut(s)	951, 1206
SchI	GAGTC	2 cut(s)	1112, 1172
ScrFI	CCNGG	4 cut(s)	227, 280, 1389, 1714
SduI	GDGCHC	3 cut(s)	157, 900, 1162
SfaNI	GCATC	6 cut(s)	124, 790, 1079, 1357, 1387, 1752
SfcI	CTRYAG	1 cut(s)	158
Sfr303I	CCGCGG	1 cut(s)	40
SgrBI	CCGCGG	1 cut(s)	40
SinI	GGWCC	2 cut(s)	951, 1206
SmlI	CTYRAG	3 cut(s)	627, 1180, 1340
SmoI	CTYRAG	3 cut(s)	627, 1180, 1340
Sse9I	AATT	6 cut(s)	527, 813, 1196, 1450, 1513, 1528
SseBI	AGGCCT	1 cut(s)	1689
SsiI	CCGC	4 cut(s)	37, 39, 128, 871
SspMI	CTAG	3 cut(s)	297, 836, 1215
StuI	AGGCCT	1 cut(s)	1689
StyD4I	CCNGG	4 cut(s)	225, 278, 1387, 1712
StyI	CCWWGG	3 cut(s)	1326, 1576, 1652
TaaI	ACNGT	5 cut(s)	584, 646, 674, 743, 1164
TaiI	ACGT	2 cut(s)	1512, 1761
TasI	AATT	6 cut(s)	527, 813, 1196, 1450, 1513, 1528
TfiI	GAWTC	4 cut(s)	923, 1001, 1250, 1333
Tru1I	TTAA	6 cut(s)	86, 149, 188, 678, 686, 1290
Tru9I	TTAA	6 cut(s)	86, 149, 188, 678, 686, 1290
TscAI	CASTG	3 cut(s)	505, 651, 661
TseFI	GTSAC	4 cut(s)	407, 656, 737, 1137
TseI	GCWGC	5 cut(s)	211, 793, 868, 1085, 1400
Tsp45I	GTSAC	4 cut(s)	407, 656, 737, 1137
TspDTI	ATGAA	6 cut(s)	555, 573, 585, 591, 974, 1230
TspGWI	ACGGA	2 cut(s)	473, 725
TspRI	CASTG	3 cut(s)	505, 651, 661
Van91I	CCANNNNNTGG	1 cut(s)	1582
VpaK11BI	GGWCC	2 cut(s)	951, 1206
XapI	RAATTY	2 cut(s)	527, 1450
XceI	RCATGY	2 cut(s)	1283, 1539
XmnI	GAANNNNTTC	1 cut(s)	310
XspI	CTAG	3 cut(s)	297, 836, 1215
Zsp2I	ATGCAT	1 cut(s)	1541

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.