ATP-dependent RNA helicase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G09995 AT1G09995 AT1G09995 AT1G09995 AT1G09995 AT1G79890 AT1G79890 AT1G79890 AT1G79890 |
| fragaria_vesca | FvH4_6g31470 FvH4_6g31470 FvH4_6g31470 |
| malus_domestica | MD09G1210800.v1.1 |
| prunus_persica | Prupe.3G069100_v2.0.a1 Prupe.3G069100_v2.0.a1 |
| pyrus_communis | pycom09g12830 pycom09g12840 |
| rosa_chinensis | RchiOBHm_Chr2g0138331 |
| rosa_laevigata | RLG00000019734 RLG00000019735 |
| rosa_multiflora | Rmu_sc0002475.1_g000005 Rmu_sc0006186.1_g000002 |
| rosa_roxburghii | Rroxscaffold_2G00106330 |
| rosa_rugosa | Rorug02G0351300 |
| rosa_samantha | Rh2AG399400 Rh2BG408700 Rh2CG385900 Rh2DG419300 |
| rosa_wichuraiana | Rw2G032510 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2757 |
| AccB1I | GGYRCC | 3 cut(s) | 28, 998, 2261 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1058, 1636 |
| AccBSI | CCGCTC | 1 cut(s) | 1846 |
| AccI | GTMKAC | 1 cut(s) | 2094 |
| AciI | CCGC | 3 cut(s) | 117, 380, 1846 |
| AclWI | GGATC | 4 cut(s) | 1691, 1706, 2312, 2700 |
| AcoI | YGGCCR | 1 cut(s) | 1449 |
| AcsI | RAATTY | 8 cut(s) | 38, 356, 549, 781, 971, 1359, 2244, 2650 |
| AcuI | CTGAAG | 3 cut(s) | 2067, 2097, 2691 |
| AcyI | GRCGYC | 1 cut(s) | 29 |
| AfaI | GTAC | 3 cut(s) | 1274, 1405, 2201 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 21, 22, 1058, 1072, 1636, 2646 |
| AflII | CTTAAG | 1 cut(s) | 2311 |
| AflIII | ACRYGT | 1 cut(s) | 2621 |
| AgeI | ACCGGT | 1 cut(s) | 1379 |
| AjiI | CACGTC | 1 cut(s) | 1252 |
| AjnI | CCWGG | 2 cut(s) | 1303, 1629 |
| Alw21I | GWGCWC | 1 cut(s) | 1341 |
| Alw26I | GTCTC | 2 cut(s) | 993, 2778 |
| AlwI | GGATC | 4 cut(s) | 1691, 1706, 2312, 2700 |
| Ama87I | CYCGRG | 1 cut(s) | 1344 |
| AoxI | GGCC | 5 cut(s) | 90, 118, 1182, 1449, 1942 |
| ApeKI | GCWGC | 2 cut(s) | 1082, 2600 |
| ApoI | RAATTY | 8 cut(s) | 38, 356, 549, 781, 971, 1359, 2244, 2650 |
| AsiGI | ACCGGT | 1 cut(s) | 1379 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 549, 971, 2187 |
| AspA2I | CCTAGG | 1 cut(s) | 2162 |
| AspLEI | GCGC | 1 cut(s) | 31 |
| AspS9I | GGNCC | 5 cut(s) | 91, 394, 1183, 1301, 1943 |
| AsuC2I | CCSGG | 3 cut(s) | 145, 1345, 1346 |
| AsuHPI | GGTGA | 6 cut(s) | 272, 338, 508, 1333, 2044, 2483 |
| AsuII | TTCGAA | 2 cut(s) | 1357, 2500 |
| AsuNHI | GCTAGC | 1 cut(s) | 2360 |
| AvaI | CYCGRG | 1 cut(s) | 1344 |
| AvaII | GGWCC | 2 cut(s) | 394, 1301 |
| AvrII | CCTAGG | 1 cut(s) | 2162 |
| BalI | TGGCCA | 1 cut(s) | 1451 |
| BanI | GGYRCC | 3 cut(s) | 28, 998, 2261 |
| BanII | GRGCYC | 1 cut(s) | 272 |
| BauI | CACGAG | 1 cut(s) | 1938 |
| BbsI | GAAGAC | 3 cut(s) | 1254, 2053, 2217 |
| Bbv12I | GWGCWC | 1 cut(s) | 1341 |
| BbvI | GCAGC | 2 cut(s) | 1069, 2612 |
| BceAI | ACGGC | 1 cut(s) | 82 |
| BciT130I | CCWGG | 2 cut(s) | 1305, 1631 |
| BciVI | GTATCC | 2 cut(s) | 1724, 2129 |
| BcnI | CCSGG | 3 cut(s) | 145, 1345, 1346 |
| BcoDI | GTCTC | 2 cut(s) | 993, 2778 |
| BfmI | CTRYAG | 2 cut(s) | 851, 1972 |
| BfoI | RGCGCY | 1 cut(s) | 32 |
| BfrI | CTTAAG | 1 cut(s) | 2311 |
| BfuI | GTATCC | 2 cut(s) | 1724, 2129 |
| BglII | AGATCT | 1 cut(s) | 1015 |
| BisI | GCNGC | 4 cut(s) | 118, 1083, 1847, 2601 |
| BlnI | CCTAGG | 1 cut(s) | 2162 |
| BlsI | GCNGC | 4 cut(s) | 119, 1084, 1848, 2602 |
| BmcAI | AGTACT | 1 cut(s) | 1274 |
| Bme1390I | CCNGG | 5 cut(s) | 145, 1305, 1345, 1346, 1631 |
| Bme18I | GGWCC | 2 cut(s) | 394, 1301 |
| BmeT110I | CYCGRG | 1 cut(s) | 1344 |
| BmgBI | CACGTC | 1 cut(s) | 1252 |
| BmgT120I | GGNCC | 5 cut(s) | 91, 394, 1183, 1301, 1943 |
| BmiI | GGNNCC | 7 cut(s) | 30, 1000, 1063, 1077, 1302, 2043, 2263 |
| BmrFI | CCNGG | 5 cut(s) | 145, 1305, 1345, 1346, 1631 |
| BmsI | GCATC | 3 cut(s) | 475, 1136, 2749 |
| BmtI | GCTAGC | 1 cut(s) | 2364 |
| BpiI | GAAGAC | 3 cut(s) | 1254, 2053, 2217 |
| BplI | GAGNNNNNCTC | 3 cut(s) | 1568, 1600, 2758 |
| BpmI | CTGGAG | 3 cut(s) | 1830, 1893, 1963 |
| Bpu10I | CCTNAGC | 2 cut(s) | 892, 947 |
| Bpu14I | TTCGAA | 2 cut(s) | 1357, 2500 |
| BpuEI | CTTGAG | 2 cut(s) | 757, 805 |
| BpuMI | CCSGG | 3 cut(s) | 145, 1345, 1346 |
| BsaAI | YACGTR | 1 cut(s) | 2629 |
| BsaHI | GRCGYC | 1 cut(s) | 29 |
| BsaI | GGTCTC | 1 cut(s) | 2778 |
| BsaJI | CCNNGG | 6 cut(s) | 112, 1002, 1344, 1399, 1856, 2162 |
| BsaWI | WCCGGW | 1 cut(s) | 1379 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 323, 353, 650, 680 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 21, 22, 1058, 1072, 1636, 2646 |
| Bse118I | RCCGGY | 1 cut(s) | 1379 |
| Bse1I | ACTGG | 6 cut(s) | 154, 606, 1623, 1809, 1873, 1925 |
| Bse3DI | GCAATG | 1 cut(s) | 191 |
| BseBI | CCWGG | 2 cut(s) | 1305, 1631 |
| BseDI | CCNNGG | 6 cut(s) | 112, 1002, 1344, 1399, 1856, 2162 |
| BseGI | GGATG | 7 cut(s) | 280, 297, 514, 529, 1127, 2328, 2659 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 21, 22, 1058, 1072, 1636, 2646 |
| BseMI | GCAATG | 1 cut(s) | 191 |
| BseMII | CTCAG | 6 cut(s) | 1004, 1566, 1764, 2267, 2289, 2433 |
| BseNI | ACTGG | 6 cut(s) | 154, 606, 1623, 1809, 1873, 1925 |
| BseRI | GAGGAG | 2 cut(s) | 344, 674 |
| BseXI | GCAGC | 2 cut(s) | 1069, 2612 |
| BsgI | GTGCAG | 1 cut(s) | 1274 |
| BshFI | GGCC | 5 cut(s) | 92, 120, 1184, 1451, 1944 |
| BshNI | GGYRCC | 3 cut(s) | 28, 998, 2261 |
| BshTI | ACCGGT | 1 cut(s) | 1379 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1341 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1344 |
| BsiSI | CCGG | 3 cut(s) | 144, 1345, 1380 |
| BslFI | GGGAC | 4 cut(s) | 123, 160, 1314, 1388 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 21, 22, 1058, 1072, 1636, 2646 |
| BsmAI | GTCTC | 2 cut(s) | 993, 2778 |
| BsmFI | GGGAC | 4 cut(s) | 123, 160, 1314, 1388 |
| BsmI | GAATGC | 2 cut(s) | 69, 304 |
| BsnI | GGCC | 5 cut(s) | 92, 120, 1184, 1451, 1944 |
| Bso31I | GGTCTC | 1 cut(s) | 2778 |
| BsoBI | CYCGRG | 1 cut(s) | 1344 |
| Bsp119I | TTCGAA | 2 cut(s) | 1357, 2500 |
| Bsp1286I | GDGCHC | 2 cut(s) | 272, 1341 |
| Bsp143I | GATC | 9 cut(s) | 1015, 1087, 1542, 1642, 1652, 1683, 1698, 2304, 2692 |
| Bsp19I | CCATGG | 1 cut(s) | 1399 |
| BspACI | CCGC | 3 cut(s) | 117, 380, 1846 |
| BspANI | GGCC | 5 cut(s) | 92, 120, 1184, 1451, 1944 |
| BspCNI | CTCAG | 6 cut(s) | 1003, 1567, 1765, 2266, 2290, 2432 |
| BspHI | TCATGA | 2 cut(s) | 84, 1995 |
| BspLI | GGNNCC | 7 cut(s) | 30, 1000, 1063, 1077, 1302, 2043, 2263 |
| BspMAI | CTGCAG | 1 cut(s) | 855 |
| BspOI | GCTAGC | 1 cut(s) | 2364 |
| BspPI | GGATC | 4 cut(s) | 1691, 1706, 2312, 2700 |
| BspT104I | TTCGAA | 2 cut(s) | 1357, 2500 |
| BspT107I | GGYRCC | 3 cut(s) | 28, 998, 2261 |
| BspTI | CTTAAG | 1 cut(s) | 2311 |
| BspTNI | GGTCTC | 1 cut(s) | 2778 |
| BsrBI | CCGCTC | 1 cut(s) | 1846 |
| BsrDI | GCAATG | 1 cut(s) | 191 |
| BsrFI | RCCGGY | 1 cut(s) | 1379 |
| BsrI | ACTGG | 6 cut(s) | 154, 606, 1623, 1809, 1873, 1925 |
| BssAI | RCCGGY | 1 cut(s) | 1379 |
| BssECI | CCNNGG | 6 cut(s) | 112, 1002, 1344, 1399, 1856, 2162 |
| BssMI | GATC | 9 cut(s) | 1015, 1087, 1542, 1642, 1652, 1683, 1698, 2304, 2692 |
| BssNI | GRCGYC | 1 cut(s) | 29 |
| BssSI | CACGAG | 1 cut(s) | 1938 |
| BssT1I | CCWWGG | 5 cut(s) | 112, 1002, 1399, 1856, 2162 |
| Bst2BI | CACGAG | 1 cut(s) | 1938 |
| Bst2UI | CCWGG | 2 cut(s) | 1305, 1631 |
| Bst6I | CTCTTC | 3 cut(s) | 432, 1119, 2074 |
| BstACI | GRCGYC | 1 cut(s) | 29 |
| BstAFI | CTTAAG | 1 cut(s) | 2311 |
| BstBAI | YACGTR | 1 cut(s) | 2629 |
| BstBI | TTCGAA | 2 cut(s) | 1357, 2500 |
| BstC8I | GCNNGC | 3 cut(s) | 1570, 2362, 2672 |
| BstDSI | CCRYGG | 1 cut(s) | 1399 |
| BstEII | GGTNACC | 1 cut(s) | 1860 |
| BstF5I | GGATG | 7 cut(s) | 280, 297, 514, 529, 1127, 2328, 2659 |
| BstH2I | RGCGCY | 1 cut(s) | 32 |
| BstHHI | GCGC | 1 cut(s) | 31 |
| BstKTI | GATC | 9 cut(s) | 1018, 1090, 1545, 1645, 1655, 1686, 1701, 2307, 2695 |
| BstMAI | GTCTC | 2 cut(s) | 993, 2778 |
| BstMBI | GATC | 9 cut(s) | 1015, 1087, 1542, 1642, 1652, 1683, 1698, 2304, 2692 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 1068, 2108 |
| BstNI | CCWGG | 2 cut(s) | 1305, 1631 |
| BstNSI | RCATGY | 5 cut(s) | 431, 1216, 1435, 1713, 1796 |
| BstPI | GGTNACC | 1 cut(s) | 1860 |
| BstSCI | CCNGG | 5 cut(s) | 143, 1303, 1343, 1344, 1629 |
| BstSFI | CTRYAG | 2 cut(s) | 851, 1972 |
| BstSNI | TACGTA | 1 cut(s) | 2629 |
| BstV1I | GCAGC | 2 cut(s) | 1069, 2612 |
| BstV2I | GAAGAC | 3 cut(s) | 1254, 2053, 2217 |
| BstX2I | RGATCY | 1 cut(s) | 1015 |
| BstYI | RGATCY | 1 cut(s) | 1015 |
| BsuI | GTATCC | 2 cut(s) | 1724, 2129 |
| BsuRI | GGCC | 5 cut(s) | 92, 120, 1184, 1451, 1944 |
| BtgI | CCRYGG | 1 cut(s) | 1399 |
| BtrI | CACGTC | 1 cut(s) | 1252 |
| BtsCI | GGATG | 7 cut(s) | 280, 297, 514, 529, 1127, 2328, 2659 |
| BtsI | GCAGTG | 2 cut(s) | 487, 1262 |
| Cac8I | GCNNGC | 3 cut(s) | 1570, 2362, 2672 |
| CciI | TCATGA | 2 cut(s) | 84, 1995 |
| CfoI | GCGC | 1 cut(s) | 31 |
| Cfr10I | RCCGGY | 1 cut(s) | 1379 |
| Cfr13I | GGNCC | 5 cut(s) | 91, 394, 1183, 1301, 1943 |
| Cfr9I | CCCGGG | 1 cut(s) | 1344 |
| CseI | GACGC | 1 cut(s) | 2135 |
| Csp6I | GTAC | 3 cut(s) | 1273, 1404, 2200 |
| CspAI | ACCGGT | 1 cut(s) | 1379 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1528, 1563 |
| CviQI | GTAC | 3 cut(s) | 1273, 1404, 2200 |
| DinI | GGCGCC | 1 cut(s) | 30 |
| DpnI | GATC | 9 cut(s) | 1017, 1089, 1544, 1644, 1654, 1685, 1700, 2306, 2694 |
| DpnII | GATC | 9 cut(s) | 1015, 1087, 1542, 1642, 1652, 1683, 1698, 2304, 2692 |
| EaeI | YGGCCR | 1 cut(s) | 1449 |
| Eam1104I | CTCTTC | 3 cut(s) | 432, 1119, 2074 |
| EarI | CTCTTC | 3 cut(s) | 432, 1119, 2074 |
| EciI | GGCGGA | 1 cut(s) | 395 |
| Eco105I | TACGTA | 1 cut(s) | 2629 |
| Eco130I | CCWWGG | 5 cut(s) | 112, 1002, 1399, 1856, 2162 |
| Eco24I | GRGCYC | 1 cut(s) | 272 |
| Eco31I | GGTCTC | 1 cut(s) | 2778 |
| Eco32I | GATATC | 1 cut(s) | 2295 |
| Eco47I | GGWCC | 2 cut(s) | 394, 1301 |
| Eco57I | CTGAAG | 3 cut(s) | 2067, 2097, 2691 |
| Eco88I | CYCGRG | 1 cut(s) | 1344 |
| Eco91I | GGTNACC | 1 cut(s) | 1860 |
| EcoO109I | RGGNCCY | 2 cut(s) | 91, 1301 |
| EcoO65I | GGTNACC | 1 cut(s) | 1860 |
| EcoRI | GAATTC | 2 cut(s) | 549, 971 |
| EcoRII | CCWGG | 2 cut(s) | 1303, 1629 |
| EcoRV | GATATC | 1 cut(s) | 2295 |
| EcoT14I | CCWWGG | 5 cut(s) | 112, 1002, 1399, 1856, 2162 |
| EcoT22I | ATGCAT | 1 cut(s) | 2104 |
| EcoT38I | GRGCYC | 1 cut(s) | 272 |
| EgeI | GGCGCC | 1 cut(s) | 30 |
| EheI | GGCGCC | 1 cut(s) | 30 |
| ErhI | CCWWGG | 5 cut(s) | 112, 1002, 1399, 1856, 2162 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 722, 754, 2681, 2713 |
| FaqI | GGGAC | 4 cut(s) | 123, 160, 1314, 1388 |
| FauNDI | CATATG | 1 cut(s) | 2176 |
| FblI | GTMKAC | 1 cut(s) | 2094 |
| Fnu4HI | GCNGC | 4 cut(s) | 118, 1083, 1847, 2601 |
| FokI | GGATG | 7 cut(s) | 287, 304, 521, 536, 1114, 2335, 2646 |
| FriOI | GRGCYC | 1 cut(s) | 272 |
| Fsp4HI | GCNGC | 4 cut(s) | 118, 1083, 1847, 2601 |
| GlaI | GCGC | 1 cut(s) | 30 |
| GluI | GCNGC | 4 cut(s) | 118, 1083, 1847, 2601 |
| GsuI | CTGGAG | 3 cut(s) | 1830, 1893, 1963 |
| HaeII | RGCGCY | 1 cut(s) | 32 |
| HaeIII | GGCC | 5 cut(s) | 92, 120, 1184, 1451, 1944 |
| HapII | CCGG | 3 cut(s) | 144, 1345, 1380 |
| HgaI | GACGC | 1 cut(s) | 2135 |
| HhaI | GCGC | 1 cut(s) | 31 |
| Hin1I | GRCGYC | 1 cut(s) | 29 |
| Hin6I | GCGC | 1 cut(s) | 29 |
| HinP1I | GCGC | 1 cut(s) | 29 |
| HincII | GTYRAC | 2 cut(s) | 310, 2723 |
| HindII | GTYRAC | 2 cut(s) | 310, 2723 |
| HindIII | AAGCTT | 1 cut(s) | 2109 |
| HpaI | GTTAAC | 1 cut(s) | 310 |
| HpaII | CCGG | 3 cut(s) | 144, 1345, 1380 |
| HphI | GGTGA | 6 cut(s) | 272, 338, 508, 1333, 2044, 2483 |
| Hpy166II | GTNNAC | 4 cut(s) | 310, 2095, 2464, 2723 |
| Hpy8I | GTNNAC | 4 cut(s) | 310, 2095, 2464, 2723 |
| HpyCH4IV | ACGT | 4 cut(s) | 1251, 1412, 2623, 2628 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 1068, 2108 |
| HpySE526I | ACGT | 4 cut(s) | 1251, 1412, 2623, 2628 |
| Hsp92I | GRCGYC | 1 cut(s) | 29 |
| HspAI | GCGC | 1 cut(s) | 29 |
| KasI | GGCGCC | 1 cut(s) | 28 |
| KspAI | GTTAAC | 1 cut(s) | 310 |
| Kzo9I | GATC | 9 cut(s) | 1015, 1087, 1542, 1642, 1652, 1683, 1698, 2304, 2692 |
| LmnI | GCTCC | 8 cut(s) | 205, 623, 1067, 1589, 1843, 1982, 2005, 2679 |
| Lsp1109I | GCAGC | 2 cut(s) | 1069, 2612 |
| LweI | GCATC | 3 cut(s) | 475, 1136, 2749 |
| MaeII | ACGT | 4 cut(s) | 1251, 1412, 2623, 2628 |
| MaeIII | GTNAC | 8 cut(s) | 410, 608, 824, 1236, 1408, 1860, 2032, 2624 |
| MalI | GATC | 9 cut(s) | 1017, 1089, 1544, 1644, 1654, 1685, 1700, 2306, 2694 |
| MbiI | CCGCTC | 1 cut(s) | 1846 |
| MboI | GATC | 9 cut(s) | 1015, 1087, 1542, 1642, 1652, 1683, 1698, 2304, 2692 |
| MfeI | CAATTG | 1 cut(s) | 2211 |
| MflI | RGATCY | 1 cut(s) | 1015 |
| MhlI | GDGCHC | 2 cut(s) | 272, 1341 |
| MlsI | TGGCCA | 1 cut(s) | 1451 |
| MluNI | TGGCCA | 1 cut(s) | 1451 |
| Mly113I | GGCGCC | 1 cut(s) | 29 |
| MlyI | GAGTC | 4 cut(s) | 151, 449, 1193, 1214 |
| MmeI | TCCRAC | 4 cut(s) | 668, 1224, 2326, 2687 |
| Mox20I | TGGCCA | 1 cut(s) | 1451 |
| Mph1103I | ATGCAT | 1 cut(s) | 2104 |
| MroXI | GAANNNNTTC | 3 cut(s) | 549, 971, 2187 |
| MscI | TGGCCA | 1 cut(s) | 1451 |
| MslI | CAYNNNNRTG | 5 cut(s) | 74, 534, 831, 2454, 2589 |
| Msp20I | TGGCCA | 1 cut(s) | 1451 |
| MspA1I | CMGCKG | 2 cut(s) | 2711, 2779 |
| MspCI | CTTAAG | 1 cut(s) | 2311 |
| MspI | CCGG | 3 cut(s) | 144, 1345, 1380 |
| MspR9I | CCNGG | 5 cut(s) | 145, 1305, 1345, 1346, 1631 |
| MunI | CAATTG | 1 cut(s) | 2211 |
| Mva1269I | GAATGC | 2 cut(s) | 69, 304 |
| MvaI | CCWGG | 2 cut(s) | 1305, 1631 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 1068, 2108 |
| NarI | GGCGCC | 1 cut(s) | 29 |
| NciI | CCSGG | 3 cut(s) | 145, 1345, 1346 |
| NcoI | CCATGG | 1 cut(s) | 1399 |
| NdeI | CATATG | 1 cut(s) | 2176 |
| NdeII | GATC | 9 cut(s) | 1015, 1087, 1542, 1642, 1652, 1683, 1698, 2304, 2692 |
| NheI | GCTAGC | 1 cut(s) | 2360 |
| NlaIV | GGNNCC | 7 cut(s) | 30, 1000, 1063, 1077, 1302, 2043, 2263 |
| NmeAIII | GCCGAG | 1 cut(s) | 403 |
| NmuCI | GTSAC | 5 cut(s) | 410, 608, 824, 1236, 2032 |
| NsiI | ATGCAT | 1 cut(s) | 2104 |
| NspI | RCATGY | 5 cut(s) | 431, 1216, 1435, 1713, 1796 |
| NspV | TTCGAA | 2 cut(s) | 1357, 2500 |
| PagI | TCATGA | 2 cut(s) | 84, 1995 |
| PctI | GAATGC | 2 cut(s) | 69, 304 |
| PdmI | GAANNNNTTC | 3 cut(s) | 549, 971, 2187 |
| PfeI | GAWTC | 9 cut(s) | 910, 1136, 1150, 1391, 2052, 2183, 2423, 2536, 2636 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1058, 1636 |
| PinAI | ACCGGT | 1 cut(s) | 1379 |
| PkrI | GCNGC | 4 cut(s) | 119, 1084, 1848, 2602 |
| PleI | GAGTC | 4 cut(s) | 151, 448, 1193, 1214 |
| PluTI | GGCGCC | 1 cut(s) | 32 |
| PpsI | GAGTC | 4 cut(s) | 151, 448, 1193, 1214 |
| Ppu21I | YACGTR | 1 cut(s) | 2629 |
| PpuMI | RGGWCCY | 1 cut(s) | 1301 |
| PsiI | TTATAA | 1 cut(s) | 2757 |
| Psp5II | RGGWCCY | 1 cut(s) | 1301 |
| Psp6I | CCWGG | 2 cut(s) | 1303, 1629 |
| PspEI | GGTNACC | 1 cut(s) | 1860 |
| PspGI | CCWGG | 2 cut(s) | 1303, 1629 |
| PspN4I | GGNNCC | 7 cut(s) | 30, 1000, 1063, 1077, 1302, 2043, 2263 |
| PspPI | GGNCC | 5 cut(s) | 91, 394, 1183, 1301, 1943 |
| PspPPI | RGGWCCY | 1 cut(s) | 1301 |
| PstI | CTGCAG | 1 cut(s) | 855 |
| PsuI | RGATCY | 1 cut(s) | 1015 |
| PvuII | CAGCTG | 2 cut(s) | 2711, 2779 |
| RsaI | GTAC | 3 cut(s) | 1274, 1405, 2201 |
| RsaNI | GTAC | 3 cut(s) | 1273, 1404, 2200 |
| RseI | CAYNNNNRTG | 5 cut(s) | 74, 534, 831, 2454, 2589 |
| SatI | GCNGC | 4 cut(s) | 118, 1083, 1847, 2601 |
| Sau3AI | GATC | 9 cut(s) | 1015, 1087, 1542, 1642, 1652, 1683, 1698, 2304, 2692 |
| Sau96I | GGNCC | 5 cut(s) | 91, 394, 1183, 1301, 1943 |
| ScaI | AGTACT | 1 cut(s) | 1274 |
| SchI | GAGTC | 4 cut(s) | 151, 449, 1193, 1214 |
| ScrFI | CCNGG | 5 cut(s) | 145, 1305, 1345, 1346, 1631 |
| SduI | GDGCHC | 2 cut(s) | 272, 1341 |
| SfaNI | GCATC | 3 cut(s) | 475, 1136, 2749 |
| SfcI | CTRYAG | 2 cut(s) | 851, 1972 |
| SfoI | GGCGCC | 1 cut(s) | 30 |
| SfuI | TTCGAA | 2 cut(s) | 1357, 2500 |
| SinI | GGWCC | 2 cut(s) | 394, 1301 |
| SmaI | CCCGGG | 1 cut(s) | 1346 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 74, 534, 831, 2454, 2589 |
| SmlI | CTYRAG | 3 cut(s) | 772, 820, 2311 |
| SmoI | CTYRAG | 3 cut(s) | 772, 820, 2311 |
| SnaBI | TACGTA | 1 cut(s) | 2629 |
| SsiI | CCGC | 3 cut(s) | 117, 380, 1846 |
| SspDI | GGCGCC | 1 cut(s) | 28 |
| SspI | AATATT | 3 cut(s) | 1165, 1264, 2528 |
| StyD4I | CCNGG | 5 cut(s) | 143, 1303, 1343, 1344, 1629 |
| StyI | CCWWGG | 5 cut(s) | 112, 1002, 1399, 1856, 2162 |
| TaiI | ACGT | 4 cut(s) | 1254, 1415, 2626, 2631 |
| TaqI | TCGA | 8 cut(s) | 132, 1357, 1962, 2124, 2181, 2426, 2500, 2642 |
| TatI | WGTACW | 2 cut(s) | 1272, 2199 |
| TauI | GCSGC | 2 cut(s) | 120, 1849 |
| TfiI | GAWTC | 9 cut(s) | 910, 1136, 1150, 1391, 2052, 2183, 2423, 2536, 2636 |
| TseFI | GTSAC | 5 cut(s) | 410, 608, 824, 1236, 2032 |
| TseI | GCWGC | 2 cut(s) | 1082, 2600 |
| Tsp45I | GTSAC | 5 cut(s) | 410, 608, 824, 1236, 2032 |
| TspGWI | ACGGA | 2 cut(s) | 543, 2662 |
| TspMI | CCCGGG | 1 cut(s) | 1344 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1058, 1636 |
| Vha464I | CTTAAG | 1 cut(s) | 2311 |
| VpaK11BI | GGWCC | 2 cut(s) | 394, 1301 |
| XapI | RAATTY | 8 cut(s) | 38, 356, 549, 781, 971, 1359, 2244, 2650 |
| XbaI | TCTAGA | 1 cut(s) | 2228 |
| XceI | RCATGY | 5 cut(s) | 431, 1216, 1435, 1713, 1796 |
| XmaI | CCCGGG | 1 cut(s) | 1344 |
| XmaJI | CCTAGG | 1 cut(s) | 2162 |
| XmiI | GTMKAC | 1 cut(s) | 2094 |
| XmnI | GAANNNNTTC | 3 cut(s) | 549, 971, 2187 |
| ZrmI | AGTACT | 1 cut(s) | 1274 |
| Zsp2I | ATGCAT | 1 cut(s) | 2104 |