Rh2CG385900

ATP-dependent RNA helicase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
Physical Location & Seq
Reverse (-)
52521333 .. 52526600
5268 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG385900.1

Sequence Viewer

Length: 2589 bp
ATGGAAGAAGAAAACCAAAATGGGGAGGCGCCCCCAAAATTCCCAGCATTTCCTTACAAACCCTACGCCATCCAGATCGACTTCATGAACGCCCTTTACCACTCTCTCAACCAAGGCGGCCTCTCCATGCTCGAAAGCCCCACCGGGACTGGTAAAACTCTAAGTATCATTTGTAGTGCTCTGCAATGGGTGGTGGATAAGAGGGAGCAAGAGAAATTGAAAAAAGAGGTTGAAACTGACAATAGTAGTGCTAAAGGTGGTGAATTTGGCTCGGATGATGAACCTGATTGGATGAGGAATGCTGTTGTTAACAATGACATTCAGGGTGAGGAGAAGAAGTCCAGGAAGAAGGATAAATTTGGGAGTGGATTTCGCAGGGCTGATAAGAGAAAGAACCATACAAATTGTACTGATTTGTTCTCTCGGCGTGTTGAGGAAGAGTCTTGCACAAACAAGGAGGGAAAGAGTTTGCAAGTGAGCAGTGATGCTGTGGATTTGAATGATGAGGAGGAGTTTTTGCTGGAAGAACATGAGAGTGATGAGGAAGGTGTTCTGTGTGCTGGGAAGTCGAAGAGGAAGGTTGCTGGGGTTTCTCTTAGTTCGTCAAGTGACGAGGAAGATGGAGCAGATGGGTCTAGCGATGATGAAGATGAGGAGGAAGAGAAGTTGAAGGTTTATTTTTGTAGTCGGACACATTCACAGCTTTCACAGTTCATAAAGGAGTTGAGAAAGACAGTCTTTGCTAATGAGATGAAGGTGGTTTGTTTGGGCTCAAGGAAGAATTTCTGCATTAACCAAGAGGTATTGAAACTTGGAAACTCAACTCGCATGAATGAACGCTGTTTGGAACTTCAGAAAAACAAGAATAAGGAAGTTTCTAAAATCAAGAGCTTAGGTGCAGGAGGAAGGATTCGCAAGAACAAGGCTTCTTGTGGATGCCCAATGCTTAGGAAACATAAACAACAGAAAGAATTCAAGAGCATGATGTCTCAACTCGGTGCCTTGGATATTGAAGATCTTGTTCATCAGGGAAGGAACATGAGGTGTTGTCCATATTATGGCTCCCGTAGCATGGTTCCTGCTGCTGATCTGGTGGTTCTACCATATCAATCTCTTCTTTCAAAAGCATCCCGCGAATCACTTGGTCTGAATCTAAAGAACAATATTATTATCATAGATGAGGCCCACAATCTAGCTGACTCCTTAATCAGCATGTATGACTCAAAAATCACTTTGTCGCAGCTGGAAGATGTGCAGTGCAATATTGAAAAGTACTTTGCAAGGTTTAGCAATCTCTTGGGACCTGGAAACCGCAGATACATCCAAACGCTTACAGTGCTTACTCGGGCTTTTCTTCGAGTTTTGCTCAATGAGGACACTGGTTATGAAGGTTCTTGCCATGATACTGAAAACTCTTCTAGAGAAAATGGCGTGCCTACTTCCTCTATGGCCATCAATGATTTTTTATTTTCACTCAATATAGACAACATCAACTTGGTTAAATTGCTTGAGTATATAAAGGAAAGCAAAATCATGCACAAGATCAGTGGATATGGGGATAAACTAGCCAGCTTTGAAAAAAGCTTGCCACTTGATGGTAGTCAAGAAAGAAGCACTCTGTCCAGTTTCCAGGCATTAGCTGATTTTTTGCTATCACTGACAAACAAAGATGGTGATGGGAGGATTATCATTTCACGGACTAAACCAACATGCTCTGGGCAGCAAGGGGGATACATCAAATATGTTATGCTCACAGGGGAGAAGATATTTTCTGAGATTGTGGAACAGGCACATGCTGTGCTACTGGCTGGGGGAACTCTGCAACCCATAGAAGAAACGAGGGAGCGGCTTTTTCCTTGGTTACCACCGAACCAGTTGCATTTGTTTTCATGTAGCCACATTGTTCCTCCAGAGAGCATTTTGCCAGTTGCAGTTGCTCGTGGCCCTTCTGGTCAGCCTTTCGATTTTAGTTACAGCTCTAGAAGGTCATCAATCATGATACAGGAGCTAGGGCGTTTGGTTTGCAATTTGGTGACAGTGGTTCCTGAAGGAATTGTTGTCTTCTTCTCTTCATTTGATTATGAAGGAGAGGTGTACAATGCATGGGAGGCTTCAGGTATCCTCGATAGAATTAAGAAGAAGAAGCGTCTATTTAGAGAGCCTAGGAAGAATACATATGTAGAATCTGTTCTGAAGGAGTACAAGGAAACAATTGATACCTTGTCTTCAGGAGAAAGGAAAGAAAATCCTTCTCAGAGTGGTGCCATACTTCTTGCTGTTGTTGGTGGTAAGATATCGGAGGGCATCAACTTGAGTGATGGGATGGGTCGGTGTATAGTCATGGTTGGACTGCCCTATGCGAGCCCTTCTGATGTTGAGCTGATGGAGAGGGTGAAGTACATTGAAGGATTGGGAAATTCAAATTCGATTAAGATTACCAATTCTCTACGTGGCAATGAACTTTACAGTGGAGAAGCACATGAAGGATTTGATATCCTCCGAAGTTGCAGACACAGAGGAAAAGAATATTATGAGAATCTTTGCATGAAAGCTGTAAACCAGTCCATCGGTATGTTCTTACAACCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

862

Amino Acids

96.47

Weight (kDa)

5.96

Isoelectric Point (pI)

49.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DEAD_2 PF06733 227 - 415 4.6e-53 DEAD_2
Helicase_C_2 PF13307 675 - 857 4.1e-29 Helicase C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 28, 998, 2261
AccB7I CCANNNNNTGG 2 cut(s) 1058, 1595
AccBSI CCGCTC 1 cut(s) 1846
AccII CGCG 1 cut(s) 1134
AciI CCGC 4 cut(s) 117, 1132, 1312, 1846
AcoI YGGCCR 1 cut(s) 1449
AcsI RAATTY 7 cut(s) 38, 263, 356, 781, 971, 2416, 2422
AcuI CTGAAG 5 cut(s) 836, 2067, 2097, 2211, 2213
AcyI GRCGYC 1 cut(s) 29
AfaI GTAC 5 cut(s) 409, 1274, 2096, 2201, 2399
AfiI CCNNNNNNNGG 4 cut(s) 22, 1058, 1072, 1595
AjnI CCWGG 3 cut(s) 341, 1303, 1629
Alw21I GWGCWC 1 cut(s) 181
Alw26I GTCTC 1 cut(s) 993
Ama87I CYCGRG 1 cut(s) 1344
AoxI GGCC 4 cut(s) 118, 1182, 1449, 1942
ApeKI GCWGC 3 cut(s) 1082, 1240, 1720
ApoI RAATTY 7 cut(s) 38, 263, 356, 781, 971, 2416, 2422
Asp700I GAANNNNTTC 4 cut(s) 549, 782, 971, 2187
AspA2I CCTAGG 1 cut(s) 2162
AspLEI GCGC 1 cut(s) 31
AspS9I GGNCC 3 cut(s) 1183, 1301, 1943
AsuC2I CCSGG 1 cut(s) 145
AsuHPI GGTGA 5 cut(s) 272, 338, 1685, 2044, 2404
AvaI CYCGRG 1 cut(s) 1344
AvaII GGWCC 1 cut(s) 1301
AvrII CCTAGG 1 cut(s) 2162
BalI TGGCCA 1 cut(s) 1451
BanI GGYRCC 3 cut(s) 28, 998, 2261
BanII GRGCYC 2 cut(s) 773, 2366
BauI CACGAG 1 cut(s) 1938
BbsI GAAGAC 2 cut(s) 2053, 2217
Bbv12I GWGCWC 1 cut(s) 181
BbvI GCAGC 3 cut(s) 1069, 1252, 1732
BcgI CGANNNNNNTGC 2 cut(s) 1858, 1892
BciT130I CCWGG 3 cut(s) 343, 1305, 1631
BciVI GTATCC 2 cut(s) 1724, 2129
BcnI CCSGG 1 cut(s) 145
BcoDI GTCTC 1 cut(s) 993
BfaI CTAG 7 cut(s) 636, 1193, 1419, 1565, 1980, 2009, 2163
BfoI RGCGCY 1 cut(s) 32
BfuI GTATCC 2 cut(s) 1724, 2129
BglII AGATCT 1 cut(s) 1015
BisI GCNGC 5 cut(s) 118, 1083, 1241, 1721, 1847
BlnI CCTAGG 1 cut(s) 2162
BlsI GCNGC 5 cut(s) 119, 1084, 1242, 1722, 1848
BmcAI AGTACT 1 cut(s) 1274
Bme1390I CCNGG 4 cut(s) 145, 343, 1305, 1631
Bme18I GGWCC 1 cut(s) 1301
BmeT110I CYCGRG 1 cut(s) 1344
BmgT120I GGNCC 3 cut(s) 1183, 1301, 1943
BmiI GGNNCC 7 cut(s) 30, 1000, 1063, 1077, 1302, 2043, 2263
BmrFI CCNGG 4 cut(s) 145, 343, 1305, 1631
BmsI GCATC 4 cut(s) 475, 926, 1136, 2313
BpiI GAAGAC 2 cut(s) 2053, 2217
BplI GAGNNNNNCTC 2 cut(s) 1350, 1382
BpmI CTGGAG 1 cut(s) 1893
Bpu10I CCTNAGC 2 cut(s) 892, 947
BpuEI CTTGAG 3 cut(s) 757, 1529, 2332
BpuMI CCSGG 1 cut(s) 145
BsaAI YACGTR 1 cut(s) 2450
BsaHI GRCGYC 1 cut(s) 29
BsaJI CCNNGG 4 cut(s) 112, 1002, 1856, 2162
BsaXI ACNNNNNCTCC 2 cut(s) 323, 353
Bsc4I CCNNNNNNNGG 4 cut(s) 22, 1058, 1072, 1595
Bse1I ACTGG 7 cut(s) 154, 1384, 1623, 1809, 1873, 1925, 2560
Bse3DI GCAATG 2 cut(s) 191, 2461
BseBI CCWGG 3 cut(s) 343, 1305, 1631
BseDI CCNNGG 4 cut(s) 112, 1002, 1856, 2162
BseGI GGATG 7 cut(s) 69, 280, 297, 941, 1127, 1320, 2328
BseLI CCNNNNNNNGG 4 cut(s) 22, 1058, 1072, 1595
BseMI GCAATG 2 cut(s) 191, 2461
BseMII CTCAG 2 cut(s) 1764, 2267
BseNI ACTGG 7 cut(s) 154, 1384, 1623, 1809, 1873, 1925, 2560
BseRI GAGGAG 4 cut(s) 344, 521, 524, 668
BseXI GCAGC 3 cut(s) 1069, 1252, 1732
BseYI CCCAGC 4 cut(s) 43, 560, 584, 1808
BsgI GTGCAG 2 cut(s) 918, 1274
Bsh1236I CGCG 1 cut(s) 1134
BshFI GGCC 4 cut(s) 120, 1184, 1451, 1944
BshNI GGYRCC 3 cut(s) 28, 998, 2261
BsiHKAI GWGCWC 1 cut(s) 181
BsiHKCI CYCGRG 1 cut(s) 1344
BsiSI CCGG 1 cut(s) 144
BslFI GGGAC 2 cut(s) 160, 1314
BslI CCNNNNNNNGG 4 cut(s) 22, 1058, 1072, 1595
BsmAI GTCTC 1 cut(s) 993
BsmFI GGGAC 2 cut(s) 160, 1314
BsmI GAATGC 1 cut(s) 304
BsnI GGCC 4 cut(s) 120, 1184, 1451, 1944
BsoBI CYCGRG 1 cut(s) 1344
Bsp1286I GDGCHC 3 cut(s) 181, 773, 2366
Bsp1407I TGTACA 1 cut(s) 2094
Bsp143I GATC 4 cut(s) 75, 1015, 1087, 1542
BspACI CCGC 4 cut(s) 117, 1132, 1312, 1846
BspANI GGCC 4 cut(s) 120, 1184, 1451, 1944
BspCNI CTCAG 2 cut(s) 1765, 2266
BspFNI CGCG 1 cut(s) 1134
BspHI TCATGA 2 cut(s) 84, 1995
BspLI GGNNCC 7 cut(s) 30, 1000, 1063, 1077, 1302, 2043, 2263
BspT107I GGYRCC 3 cut(s) 28, 998, 2261
BsrBI CCGCTC 1 cut(s) 1846
BsrDI GCAATG 2 cut(s) 191, 2461
BsrGI TGTACA 1 cut(s) 2094
BsrI ACTGG 7 cut(s) 154, 1384, 1623, 1809, 1873, 1925, 2560
BssECI CCNNGG 4 cut(s) 112, 1002, 1856, 2162
BssMI GATC 4 cut(s) 75, 1015, 1087, 1542
BssNI GRCGYC 1 cut(s) 29
BssSI CACGAG 1 cut(s) 1938
BssT1I CCWWGG 4 cut(s) 112, 1002, 1856, 2162
Bst2BI CACGAG 1 cut(s) 1938
Bst2UI CCWGG 3 cut(s) 343, 1305, 1631
Bst4CI ACNGT 5 cut(s) 711, 736, 1336, 2038, 2468
Bst6I CTCTTC 6 cut(s) 432, 566, 654, 1119, 1420, 2074
BstACI GRCGYC 1 cut(s) 29
BstAUI TGTACA 1 cut(s) 2094
BstBAI YACGTR 1 cut(s) 2450
BstC8I GCNNGC 4 cut(s) 1433, 1570, 1586, 2362
BstDEI CTNAG 6 cut(s) 161, 596, 892, 947, 1773, 2253
BstEII GGTNACC 1 cut(s) 1860
BstF5I GGATG 7 cut(s) 69, 280, 297, 941, 1127, 1320, 2328
BstFNI CGCG 1 cut(s) 1134
BstH2I RGCGCY 1 cut(s) 32
BstHHI GCGC 1 cut(s) 31
BstKTI GATC 4 cut(s) 78, 1018, 1090, 1545
BstMAI GTCTC 1 cut(s) 993
BstMBI GATC 4 cut(s) 75, 1015, 1087, 1542
BstMWI GCNNNNNNNGC 3 cut(s) 1068, 1336, 2108
BstNI CCWGG 3 cut(s) 343, 1305, 1631
BstNSI RCATGY 3 cut(s) 1216, 1713, 1796
BstPI GGTNACC 1 cut(s) 1860
BstSCI CCNGG 4 cut(s) 143, 341, 1303, 1629
BstUI CGCG 1 cut(s) 1134
BstV1I GCAGC 3 cut(s) 1069, 1252, 1732
BstV2I GAAGAC 2 cut(s) 2053, 2217
BstX2I RGATCY 1 cut(s) 1015
BstYI RGATCY 1 cut(s) 1015
BsuI GTATCC 2 cut(s) 1724, 2129
BsuRI GGCC 4 cut(s) 120, 1184, 1451, 1944
BtgZI GCGATG 1 cut(s) 654
BtsCI GGATG 7 cut(s) 69, 280, 297, 941, 1127, 1320, 2328
BtsI GCAGTG 2 cut(s) 487, 1262
BtsIMutI CAGTG 8 cut(s) 487, 1262, 1341, 1377, 1552, 1655, 2043, 2473
Cac8I GCNNGC 4 cut(s) 1433, 1570, 1586, 2362
CciI TCATGA 2 cut(s) 84, 1995
CfoI GCGC 1 cut(s) 31
Cfr13I GGNCC 3 cut(s) 1183, 1301, 1943
CseI GACGC 1 cut(s) 2135
Csp6I GTAC 5 cut(s) 408, 1273, 2095, 2200, 2398
CspCI CAANNNNNGTGG 2 cut(s) 1528, 1563
CviQI GTAC 5 cut(s) 408, 1273, 2095, 2200, 2398
DdeI CTNAG 6 cut(s) 161, 596, 892, 947, 1773, 2253
DinI GGCGCC 1 cut(s) 30
DpnI GATC 4 cut(s) 77, 1017, 1089, 1544
DpnII GATC 4 cut(s) 75, 1015, 1087, 1542
EaeI YGGCCR 1 cut(s) 1449
Eam1104I CTCTTC 6 cut(s) 432, 566, 654, 1119, 1420, 2074
EarI CTCTTC 6 cut(s) 432, 566, 654, 1119, 1420, 2074
Eco130I CCWWGG 4 cut(s) 112, 1002, 1856, 2162
Eco24I GRGCYC 2 cut(s) 773, 2366
Eco32I GATATC 2 cut(s) 2295, 2494
Eco47I GGWCC 1 cut(s) 1301
Eco57I CTGAAG 5 cut(s) 836, 2067, 2097, 2211, 2213
Eco88I CYCGRG 1 cut(s) 1344
Eco91I GGTNACC 1 cut(s) 1860
EcoO109I RGGNCCY 1 cut(s) 1301
EcoO65I GGTNACC 1 cut(s) 1860
EcoRI GAATTC 1 cut(s) 971
EcoRII CCWGG 3 cut(s) 341, 1303, 1629
EcoRV GATATC 2 cut(s) 2295, 2494
EcoT14I CCWWGG 4 cut(s) 112, 1002, 1856, 2162
EcoT22I ATGCAT 1 cut(s) 2104
EcoT38I GRGCYC 2 cut(s) 773, 2366
EgeI GGCGCC 1 cut(s) 30
EheI GGCGCC 1 cut(s) 30
ErhI CCWWGG 4 cut(s) 112, 1002, 1856, 2162
FalI AAGNNNNNCTT 2 cut(s) 722, 754
FaqI GGGAC 2 cut(s) 160, 1314
FauI CCCGC 1 cut(s) 1139
FauNDI CATATG 1 cut(s) 2176
Fnu4HI GCNGC 5 cut(s) 118, 1083, 1241, 1721, 1847
FokI GGATG 7 cut(s) 56, 287, 304, 948, 1114, 1307, 2335
FriOI GRGCYC 2 cut(s) 773, 2366
Fsp4HI GCNGC 5 cut(s) 118, 1083, 1241, 1721, 1847
FspBI CTAG 7 cut(s) 636, 1193, 1419, 1565, 1980, 2009, 2163
GlaI GCGC 1 cut(s) 30
GluI GCNGC 5 cut(s) 118, 1083, 1241, 1721, 1847
GsaI CCCAGC 4 cut(s) 47, 564, 588, 1812
GsuI CTGGAG 1 cut(s) 1893
HaeII RGCGCY 1 cut(s) 32
HaeIII GGCC 4 cut(s) 120, 1184, 1451, 1944
HapII CCGG 1 cut(s) 144
HgaI GACGC 1 cut(s) 2135
HhaI GCGC 1 cut(s) 31
Hin1I GRCGYC 1 cut(s) 29
Hin6I GCGC 1 cut(s) 29
HinP1I GCGC 1 cut(s) 29
HincII GTYRAC 1 cut(s) 310
HindII GTYRAC 1 cut(s) 310
HindIII AAGCTT 1 cut(s) 1582
HinfI GANTC 8 cut(s) 440, 910, 1136, 1150, 1199, 1220, 2183, 2536
HpaI GTTAAC 1 cut(s) 310
HpaII CCGG 1 cut(s) 144
HphI GGTGA 5 cut(s) 272, 338, 1685, 2044, 2404
Hpy166II GTNNAC 3 cut(s) 310, 2095, 2557
Hpy8I GTNNAC 3 cut(s) 310, 2095, 2557
HpyCH4III ACNGT 5 cut(s) 711, 736, 1336, 2038, 2468
HpyCH4IV ACGT 1 cut(s) 2449
HpyF10VI GCNNNNNNNGC 3 cut(s) 1068, 1336, 2108
HpyF3I CTNAG 6 cut(s) 161, 596, 892, 947, 1773, 2253
HpySE526I ACGT 1 cut(s) 2449
Hsp92I GRCGYC 1 cut(s) 29
HspAI GCGC 1 cut(s) 29
KasI GGCGCC 1 cut(s) 28
KspAI GTTAAC 1 cut(s) 310
Kzo9I GATC 4 cut(s) 75, 1015, 1087, 1542
LmnI GCTCC 5 cut(s) 205, 623, 1067, 1843, 2005
Lsp1109I GCAGC 3 cut(s) 1069, 1252, 1732
LweI GCATC 4 cut(s) 475, 926, 1136, 2313
MaeI CTAG 7 cut(s) 636, 1193, 1419, 1565, 1980, 2009, 2163
MaeII ACGT 1 cut(s) 2449
MaeIII GTNAC 4 cut(s) 608, 1860, 1970, 2032
MalI GATC 4 cut(s) 77, 1017, 1089, 1544
MbiI CCGCTC 1 cut(s) 1846
MboI GATC 4 cut(s) 75, 1015, 1087, 1542
MfeI CAATTG 1 cut(s) 2211
MflI RGATCY 1 cut(s) 1015
MhlI GDGCHC 3 cut(s) 181, 773, 2366
MlsI TGGCCA 1 cut(s) 1451
MluNI TGGCCA 1 cut(s) 1451
Mly113I GGCGCC 1 cut(s) 29
MlyI GAGTC 3 cut(s) 449, 1193, 1214
MmeI TCCRAC 2 cut(s) 668, 2326
Mox20I TGGCCA 1 cut(s) 1451
Mph1103I ATGCAT 1 cut(s) 2104
MroXI GAANNNNTTC 4 cut(s) 549, 782, 971, 2187
MscI TGGCCA 1 cut(s) 1451
MseI TTAA 6 cut(s) 309, 792, 1205, 1500, 2133, 2430
MslI CAYNNNNRTG 2 cut(s) 534, 2570
Msp20I TGGCCA 1 cut(s) 1451
MspA1I CMGCKG 1 cut(s) 1243
MspI CCGG 1 cut(s) 144
MspR9I CCNGG 4 cut(s) 145, 343, 1305, 1631
MunI CAATTG 1 cut(s) 2211
Mva1269I GAATGC 1 cut(s) 304
MvaI CCWGG 3 cut(s) 343, 1305, 1631
MvnI CGCG 1 cut(s) 1134
MwoI GCNNNNNNNGC 3 cut(s) 1068, 1336, 2108
NarI GGCGCC 1 cut(s) 29
NciI CCSGG 1 cut(s) 145
NdeI CATATG 1 cut(s) 2176
NdeII GATC 4 cut(s) 75, 1015, 1087, 1542
NlaIV GGNNCC 7 cut(s) 30, 1000, 1063, 1077, 1302, 2043, 2263
NmeAIII GCCGAG 1 cut(s) 403
NmuCI GTSAC 2 cut(s) 608, 2032
NsiI ATGCAT 1 cut(s) 2104
NspI RCATGY 3 cut(s) 1216, 1713, 1796
PagI TCATGA 2 cut(s) 84, 1995
PctI GAATGC 1 cut(s) 304
PdmI GAANNNNTTC 4 cut(s) 549, 782, 971, 2187
PfeI GAWTC 5 cut(s) 910, 1136, 1150, 2183, 2536
PflMI CCANNNNNTGG 2 cut(s) 1058, 1595
PfoI TCCNGGA 1 cut(s) 341
PkrI GCNGC 5 cut(s) 119, 1084, 1242, 1722, 1848
PleI GAGTC 3 cut(s) 448, 1193, 1214
PluTI GGCGCC 1 cut(s) 32
PpsI GAGTC 3 cut(s) 448, 1193, 1214
Ppu21I YACGTR 1 cut(s) 2450
PpuMI RGGWCCY 1 cut(s) 1301
Psp5II RGGWCCY 1 cut(s) 1301
Psp6I CCWGG 3 cut(s) 341, 1303, 1629
PspEI GGTNACC 1 cut(s) 1860
PspFI CCCAGC 4 cut(s) 43, 560, 584, 1808
PspGI CCWGG 3 cut(s) 341, 1303, 1629
PspN4I GGNNCC 7 cut(s) 30, 1000, 1063, 1077, 1302, 2043, 2263
PspPI GGNCC 3 cut(s) 1183, 1301, 1943
PspPPI RGGWCCY 1 cut(s) 1301
PsrI GAACNNNNNNTAC 4 cut(s) 80, 112, 2172, 2204
PsuI RGATCY 1 cut(s) 1015
PvuII CAGCTG 1 cut(s) 1243
RsaI GTAC 5 cut(s) 409, 1274, 2096, 2201, 2399
RsaNI GTAC 5 cut(s) 408, 1273, 2095, 2200, 2398
RseI CAYNNNNRTG 2 cut(s) 534, 2570
SaqAI TTAA 6 cut(s) 309, 792, 1205, 1500, 2133, 2430
SatI GCNGC 5 cut(s) 118, 1083, 1241, 1721, 1847
Sau3AI GATC 4 cut(s) 75, 1015, 1087, 1542
Sau96I GGNCC 3 cut(s) 1183, 1301, 1943
ScaI AGTACT 1 cut(s) 1274
SchI GAGTC 3 cut(s) 449, 1193, 1214
ScrFI CCNGG 4 cut(s) 145, 343, 1305, 1631
SduI GDGCHC 3 cut(s) 181, 773, 2366
SfaNI GCATC 4 cut(s) 475, 926, 1136, 2313
SfoI GGCGCC 1 cut(s) 30
SinI GGWCC 1 cut(s) 1301
SmiMI CAYNNNNRTG 2 cut(s) 534, 2570
SmlI CTYRAG 3 cut(s) 772, 1508, 2311
SmoI CTYRAG 3 cut(s) 772, 1508, 2311
SsiI CCGC 4 cut(s) 117, 1132, 1312, 1846
SspDI GGCGCC 1 cut(s) 28
SspI AATATT 3 cut(s) 1165, 1264, 2528
SspMI CTAG 7 cut(s) 636, 1193, 1419, 1565, 1980, 2009, 2163
StyD4I CCNGG 4 cut(s) 143, 341, 1303, 1629
StyI CCWWGG 4 cut(s) 112, 1002, 1856, 2162
TaaI ACNGT 5 cut(s) 711, 736, 1336, 2038, 2468
TaiI ACGT 1 cut(s) 2452
TaqI TCGA 7 cut(s) 78, 132, 569, 1357, 1962, 2124, 2426
TatI WGTACW 5 cut(s) 407, 1272, 2094, 2199, 2397
TauI GCSGC 2 cut(s) 120, 1849
TfiI GAWTC 5 cut(s) 910, 1136, 1150, 2183, 2536
Tru1I TTAA 6 cut(s) 309, 792, 1205, 1500, 2133, 2430
Tru9I TTAA 6 cut(s) 309, 792, 1205, 1500, 2133, 2430
TscAI CASTG 8 cut(s) 487, 1262, 1341, 1384, 1552, 1662, 2043, 2473
TseFI GTSAC 2 cut(s) 608, 2032
TseI GCWGC 3 cut(s) 1082, 1240, 1720
Tsp45I GTSAC 2 cut(s) 608, 2032
TspGWI ACGGA 1 cut(s) 1711
TspRI CASTG 8 cut(s) 487, 1262, 1341, 1384, 1552, 1662, 2043, 2473
Van91I CCANNNNNTGG 2 cut(s) 1058, 1595
VpaK11BI GGWCC 1 cut(s) 1301
XapI RAATTY 7 cut(s) 38, 263, 356, 781, 971, 2416, 2422
XbaI TCTAGA 2 cut(s) 1418, 1979
XceI RCATGY 3 cut(s) 1216, 1713, 1796
XmaJI CCTAGG 1 cut(s) 2162
XmnI GAANNNNTTC 4 cut(s) 549, 782, 971, 2187
XspI CTAG 7 cut(s) 636, 1193, 1419, 1565, 1980, 2009, 2163
ZrmI AGTACT 1 cut(s) 1274
Zsp2I ATGCAT 1 cut(s) 2104
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.