Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0005377

Physical Location & Seq

Genomic Coordinates Reverse (-)

60811993 .. 60817371

Gene Structure 5379 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG419300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2709 bp

ATGGAAGAAGAAAACCAAAATGGGGAGGCGCCCCCAAAATTCCCAGCATTTCCTTACAAACCCTACGCCATCCAGATCGACTTCATGAACGCCCTTTACCACTCTCTCAACCAAGGCGGCCTCTCCATGCTCGAAAGCCCCACCGGGACTGGTAAGACTCTGAGTATCATTTGTAGTGCTTTGCAATGGGTGGTTGATAAAAGGGAGCAAGAGAAGTTGAAAAAGGAGGTTGAAACTGACAATAGTAGTGCTAAAGGTGGTGAATTTGGCTCGGATGATGAACCTGATTGGATGAGGAATGCTGTTATTAACAAAGACATTCAGGGTGAGGAGAAGAAGTCCAGGAAGAAGGATAAATTTGGGAGTGGATTTCGCAGGGCTGATAAGAGAAAGAACCATGCAAATTGTACTGATTTGTTCTCTCGGCGTGTTGAGGAAGAGTCTTGCACAAACAAGGAGGGAAAGAGTTTGCAAGTGAGCAGTGATGCTGTGGATTTGAATGATGAGGAGGAGTTTTTGCTGGAAGAACATGAGAGTGATGAGGAAGGTGTCCTGTGTGCTGGGAAGTCGAAGAGGAAGGTTGCTGGGGTTTCTCTTAGTTCGTCAAGTGACGAGGAAGATGGAGCAGATGGGTCTAGCGATGATGAAGATGAGGAGGAAGAGAAGTTGAAGGTTTATTTTTGTAGTCGGACACATTCACAGCTTTCACAGTTCATAAAGGAGTTGAGAAAGACAGTCTTTGCTAATGAGATGAAGGTGGTTTGTTTGGGCTCAAGGAAGAATTTCTGCATTAACCAAGAGGTATTGAAACTTGGAAACTCAACTCGCATCAATGAACGCTGTTTGGAACTTCAGAAAAACAAGAATAAGGAAGTTTCTAAAATCAAGAGCTTAGGTGCAGGAGGAAGGATTCGCAAGAACAAGGCTTCTTGTGGATGCCCAATGCTTAGGAAACATAAACAACAGAAAGAATTCAAGAGCATGATGTCTCAACTCGGTGCCTTGGATATTGAAGATCTTGTTCATCAGGGAAGGAACATGAGGTGTTGTCCATATTATGGCTCCCGTAGCATGGTTCCTGCTGCTGATCTGGTGGTTCTACCATATCAATCTCTTCTTTCAAAAGCATCCCGCGAATCACTTGGTCTGAATCTAAAGAACAATATTATTATCATAGATGAGGCCCACAATCTAGCTGACTCCTTAATCAGCATGCATGACTCAAAAATCACTTTGTCGCAGCTGGAAGATGTGCAGTGCAATATTGAAAAGTACTTTGCAAGGTTTAGCAATCTCTTGGGACCTGGAAACCGCAGATACATCCAAACGCTCACAGTGCTTACTCGGGCTTTTCTTCGAGTTTTGCTCAATGAGGACACTGGTTATGAAGGTTCTTGCCATGATACTGAAAACTCTTCTAGAGAAAATGGCGTGCCTACTTCCTCTATGGCCATCAATGATTTTTTATTTTCACTCAATATAGACAACATCAACTTGGTTAAATTGCTTGAGTATATAAAGGAAAGCAAAATCATGCACAAGATCAGTGGATATGGGGATAAACTAGCCAGCTTTGAAAAAAGCTTGCCACTTGATGGTAGTGAAGAAAGAAGCACTCTGTCCAGTTTCCAGGCATTAGCTGATTTTTTGCTATCACTGACAAACAAAGATGGTGATGGGAGGATTATCATTTCACGGACTAAACCAACATGCTCTGGGCAGCAAGGGGGATACATCAAATATGTTATGCTCACAGGGGAGAAGATATTTTCTGAGATTGTGGAACAGGCACATGCTGTGCTACTGGCTGGGGGAACTCTGCAACCCATAGAAGAAACGAGGGAGCGGCTTTTTCCTTGGTTACCACCGAACCAGTTGCATTTGTTTTCATGTAGCCACATTGTTCCTCCTGAGAGCATTTTGCCAGTTGCAGTTGCTCGTGGCCCTTCTGGTCAGCCTTTCGATTTTAGTTACAGCTCTAGAAGGTCATCAATCATGATACAGGAGCTAGGGCGTTTGGTTTGCAATTTGGTGACAGTGGTTCCTGAAGGAATCGTTGTCTTCTTCTCTTCATTTGATTATGAAGGAGAGGTGTACAATGCATGGGAGGCTTCAGGTATCCTCGATAGAATTAAGAAGAAGAAGCGTCTATTTAGAGAGCCTAGGAAGAATACATATGTAGAATCTGTTCTGAAGGAGTACAAGGAAACAATTGATACCTTGTCTTCAGGAGAAAGGAAAGAAAATCCTTCTCAGAGTGGTGCCATACTTCTTGCTGTTGTTGGTGGTAAGATATCGGAGGGCATCAACTTGAGTGATGGGATGGGTCGGTGTATAGTCATGGTTGGACTGCCCTATGCGAGCCCTTCTGATGTTGAGCTGATGGAGAGGGTGAAGTACATTGAAGGATTGGGAAATTCAAATTCGATTAAGATTACCAATTCTCTATGTGGCAATGAACTTTACAGTGGAGAAGCACATGAAGGATTTGATATCCTCCGAAGTTGCAGACACAGAGGAAAAGAATATTATGAGAATCTTTGCATGAAAGCTGTAAACCAGTCCATCGCTGATTCCTCAACACGGAATTTCAGGCATCCAACTAGCAAGCTCCCACAGTGGATAAAGGATCGTTTCGTTGCTTCAGGTGATTACGGTCAACTTCATAGGATGTTGCATCAGTTTTTTAGTTATAACAAAAAGAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD_2 Helicase_C_2

Protein Analysis

902

Amino Acids

101.24

Weight (kDa)

6.47

Isoelectric Point (pI)

49.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD_2	PF06733	227 - 415	2.1e-53	DEAD_2
Helicase_C_2	PF13307	675 - 856	4.4e-28	Helicase C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005377)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G09995 AT1G09995 AT1G09995 AT1G09995 AT1G09995 AT1G79890 AT1G79890 AT1G79890 AT1G79890
fragaria_vesca	FvH4_6g31470 FvH4_6g31470 FvH4_6g31470
malus_domestica	MD09G1210800.v1.1
prunus_persica	Prupe.3G069100_v2.0.a1 Prupe.3G069100_v2.0.a1
pyrus_communis	pycom09g12830 pycom09g12840
rosa_chinensis	RchiOBHm_Chr2g0138331
rosa_laevigata	RLG00000019734 RLG00000019735
rosa_multiflora	Rmu_sc0002475.1_g000005 Rmu_sc0006186.1_g000002
rosa_roxburghii	Rroxscaffold_2G00106330
rosa_rugosa	Rorug02G0351300
rosa_samantha	Rh2AG399400 Rh2BG408700 Rh2CG385900 Rh2DG419300
rosa_wichuraiana	Rw2G032510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2694
AccB1I	GGYRCC	3 cut(s)	28, 998, 2261
AccB7I	CCANNNNNTGG	2 cut(s)	1058, 1595
AccBSI	CCGCTC	1 cut(s)	1846
AccII	CGCG	1 cut(s)	1134
AciI	CCGC	4 cut(s)	117, 1132, 1312, 1846
AclWI	GGATC	1 cut(s)	2637
AcoI	YGGCCR	1 cut(s)	1449
AcsI	RAATTY	8 cut(s)	38, 263, 356, 781, 971, 2416, 2422, 2587
AcuI	CTGAAG	6 cut(s)	836, 2067, 2097, 2211, 2213, 2628
AcyI	GRCGYC	1 cut(s)	29
AfaI	GTAC	5 cut(s)	409, 1274, 2096, 2201, 2399
AfiI	CCNNNNNNNGG	5 cut(s)	22, 1058, 1072, 1595, 2583
AjnI	CCWGG	3 cut(s)	341, 1303, 1629
Alw26I	GTCTC	1 cut(s)	993
AlwI	GGATC	1 cut(s)	2637
Ama87I	CYCGRG	1 cut(s)	1344
AoxI	GGCC	4 cut(s)	118, 1182, 1449, 1942
ApeKI	GCWGC	3 cut(s)	1082, 1240, 1720
ApoI	RAATTY	8 cut(s)	38, 263, 356, 781, 971, 2416, 2422, 2587
Asp700I	GAANNNNTTC	3 cut(s)	782, 971, 2187
AspA2I	CCTAGG	1 cut(s)	2162
AspLEI	GCGC	1 cut(s)	31
AspS9I	GGNCC	3 cut(s)	1183, 1301, 1943
AsuC2I	CCSGG	1 cut(s)	145
AsuHPI	GGTGA	6 cut(s)	272, 338, 1685, 2044, 2404, 2660
AvaI	CYCGRG	1 cut(s)	1344
AvaII	GGWCC	1 cut(s)	1301
AvrII	CCTAGG	1 cut(s)	2162
BalI	TGGCCA	1 cut(s)	1451
BanI	GGYRCC	3 cut(s)	28, 998, 2261
BanII	GRGCYC	2 cut(s)	773, 2366
BauI	CACGAG	1 cut(s)	1938
BbsI	GAAGAC	2 cut(s)	2053, 2217
BbvI	GCAGC	3 cut(s)	1069, 1252, 1732
BcgI	CGANNNNNNTGC	2 cut(s)	1858, 1892
BciT130I	CCWGG	3 cut(s)	343, 1305, 1631
BciVI	GTATCC	2 cut(s)	1724, 2129
BcnI	CCSGG	1 cut(s)	145
BcoDI	GTCTC	1 cut(s)	993
BfaI	CTAG	8 cut(s)	636, 1193, 1419, 1565, 1980, 2009, 2163, 2604
BfoI	RGCGCY	1 cut(s)	32
BfuI	GTATCC	2 cut(s)	1724, 2129
BglII	AGATCT	1 cut(s)	1015
BisI	GCNGC	5 cut(s)	118, 1083, 1241, 1721, 1847
BlnI	CCTAGG	1 cut(s)	2162
BlsI	GCNGC	5 cut(s)	119, 1084, 1242, 1722, 1848
BmcAI	AGTACT	1 cut(s)	1274
Bme1390I	CCNGG	4 cut(s)	145, 343, 1305, 1631
Bme18I	GGWCC	1 cut(s)	1301
BmeT110I	CYCGRG	1 cut(s)	1344
BmgT120I	GGNCC	3 cut(s)	1183, 1301, 1943
BmiI	GGNNCC	7 cut(s)	30, 1000, 1063, 1077, 1302, 2043, 2263
BmrFI	CCNGG	4 cut(s)	145, 343, 1305, 1631
BmsI	GCATC	7 cut(s)	475, 837, 926, 1136, 2313, 2605, 2686
BpiI	GAAGAC	2 cut(s)	2053, 2217
BplI	GAGNNNNNCTC	2 cut(s)	1350, 1382
Bpu10I	CCTNAGC	2 cut(s)	892, 947
BpuEI	CTTGAG	3 cut(s)	757, 1529, 2332
BpuMI	CCSGG	1 cut(s)	145
BsaHI	GRCGYC	1 cut(s)	29
BsaJI	CCNNGG	4 cut(s)	112, 1002, 1856, 2162
BsaXI	ACNNNNNCTCC	2 cut(s)	323, 353
Bsc4I	CCNNNNNNNGG	5 cut(s)	22, 1058, 1072, 1595, 2583
Bse1I	ACTGG	7 cut(s)	154, 1384, 1623, 1809, 1873, 1925, 2560
Bse3DI	GCAATG	2 cut(s)	191, 2461
BseBI	CCWGG	3 cut(s)	343, 1305, 1631
BseDI	CCNNGG	4 cut(s)	112, 1002, 1856, 2162
BseGI	GGATG	9 cut(s)	69, 280, 297, 941, 1127, 1320, 2328, 2596, 2676
BseLI	CCNNNNNNNGG	5 cut(s)	22, 1058, 1072, 1595, 2583
BseMI	GCAATG	2 cut(s)	191, 2461
BseMII	CTCAG	4 cut(s)	152, 1764, 1902, 2267
BseNI	ACTGG	7 cut(s)	154, 1384, 1623, 1809, 1873, 1925, 2560
BseRI	GAGGAG	4 cut(s)	344, 521, 524, 668
BseXI	GCAGC	3 cut(s)	1069, 1252, 1732
BseYI	CCCAGC	4 cut(s)	43, 560, 584, 1808
BsgI	GTGCAG	2 cut(s)	918, 1274
Bsh1236I	CGCG	1 cut(s)	1134
BshFI	GGCC	4 cut(s)	120, 1184, 1451, 1944
BshNI	GGYRCC	3 cut(s)	28, 998, 2261
BsiHKCI	CYCGRG	1 cut(s)	1344
BsiSI	CCGG	1 cut(s)	144
BslFI	GGGAC	2 cut(s)	160, 1314
BslI	CCNNNNNNNGG	5 cut(s)	22, 1058, 1072, 1595, 2583
BsmAI	GTCTC	1 cut(s)	993
BsmFI	GGGAC	2 cut(s)	160, 1314
BsmI	GAATGC	1 cut(s)	304
BsnI	GGCC	4 cut(s)	120, 1184, 1451, 1944
BsoBI	CYCGRG	1 cut(s)	1344
Bsp1286I	GDGCHC	2 cut(s)	773, 2366
Bsp1407I	TGTACA	1 cut(s)	2094
Bsp143I	GATC	5 cut(s)	75, 1015, 1087, 1542, 2629
BspACI	CCGC	4 cut(s)	117, 1132, 1312, 1846
BspANI	GGCC	4 cut(s)	120, 1184, 1451, 1944
BspCNI	CTCAG	4 cut(s)	153, 1765, 1903, 2266
BspFNI	CGCG	1 cut(s)	1134
BspHI	TCATGA	2 cut(s)	84, 1995
BspLI	GGNNCC	7 cut(s)	30, 1000, 1063, 1077, 1302, 2043, 2263
BspPI	GGATC	1 cut(s)	2637
BspT107I	GGYRCC	3 cut(s)	28, 998, 2261
BsrBI	CCGCTC	1 cut(s)	1846
BsrDI	GCAATG	2 cut(s)	191, 2461
BsrGI	TGTACA	1 cut(s)	2094
BsrI	ACTGG	7 cut(s)	154, 1384, 1623, 1809, 1873, 1925, 2560
BssECI	CCNNGG	4 cut(s)	112, 1002, 1856, 2162
BssMI	GATC	5 cut(s)	75, 1015, 1087, 1542, 2629
BssNI	GRCGYC	1 cut(s)	29
BssSI	CACGAG	1 cut(s)	1938
BssT1I	CCWWGG	4 cut(s)	112, 1002, 1856, 2162
Bst2BI	CACGAG	1 cut(s)	1938
Bst2UI	CCWGG	3 cut(s)	343, 1305, 1631
Bst4CI	ACNGT	7 cut(s)	711, 736, 1336, 2038, 2468, 2619, 2657
Bst6I	CTCTTC	6 cut(s)	432, 566, 654, 1119, 1420, 2074
BstACI	GRCGYC	1 cut(s)	29
BstAUI	TGTACA	1 cut(s)	2094
BstC8I	GCNNGC	6 cut(s)	1214, 1433, 1570, 1586, 2362, 2609
BstDEI	CTNAG	7 cut(s)	161, 596, 892, 947, 1773, 1911, 2253
BstEII	GGTNACC	1 cut(s)	1860
BstF5I	GGATG	9 cut(s)	69, 280, 297, 941, 1127, 1320, 2328, 2596, 2676
BstFNI	CGCG	1 cut(s)	1134
BstH2I	RGCGCY	1 cut(s)	32
BstHHI	GCGC	1 cut(s)	31
BstKTI	GATC	5 cut(s)	78, 1018, 1090, 1545, 2632
BstMAI	GTCTC	1 cut(s)	993
BstMBI	GATC	5 cut(s)	75, 1015, 1087, 1542, 2629
BstMWI	GCNNNNNNNGC	3 cut(s)	1068, 1336, 2108
BstNI	CCWGG	3 cut(s)	343, 1305, 1631
BstNSI	RCATGY	3 cut(s)	1216, 1713, 1796
BstPI	GGTNACC	1 cut(s)	1860
BstSCI	CCNGG	4 cut(s)	143, 341, 1303, 1629
BstUI	CGCG	1 cut(s)	1134
BstV1I	GCAGC	3 cut(s)	1069, 1252, 1732
BstV2I	GAAGAC	2 cut(s)	2053, 2217
BstX2I	RGATCY	1 cut(s)	1015
BstYI	RGATCY	1 cut(s)	1015
BsuI	GTATCC	2 cut(s)	1724, 2129
BsuRI	GGCC	4 cut(s)	120, 1184, 1451, 1944
BtgZI	GCGATG	2 cut(s)	654, 2551
BtsCI	GGATG	9 cut(s)	69, 280, 297, 941, 1127, 1320, 2328, 2596, 2676
BtsI	GCAGTG	2 cut(s)	487, 1262
BtsIMutI	CAGTG	9 cut(s)	487, 1262, 1341, 1377, 1552, 1655, 2043, 2473, 2624
Cac8I	GCNNGC	6 cut(s)	1214, 1433, 1570, 1586, 2362, 2609
CciI	TCATGA	2 cut(s)	84, 1995
CfoI	GCGC	1 cut(s)	31
Cfr13I	GGNCC	3 cut(s)	1183, 1301, 1943
CseI	GACGC	1 cut(s)	2135
Csp6I	GTAC	5 cut(s)	408, 1273, 2095, 2200, 2398
CspCI	CAANNNNNGTGG	2 cut(s)	1528, 1563
CviQI	GTAC	5 cut(s)	408, 1273, 2095, 2200, 2398
DdeI	CTNAG	7 cut(s)	161, 596, 892, 947, 1773, 1911, 2253
DinI	GGCGCC	1 cut(s)	30
DpnI	GATC	5 cut(s)	77, 1017, 1089, 1544, 2631
DpnII	GATC	5 cut(s)	75, 1015, 1087, 1542, 2629
EaeI	YGGCCR	1 cut(s)	1449
Eam1104I	CTCTTC	6 cut(s)	432, 566, 654, 1119, 1420, 2074
EarI	CTCTTC	6 cut(s)	432, 566, 654, 1119, 1420, 2074
Eco130I	CCWWGG	4 cut(s)	112, 1002, 1856, 2162
Eco24I	GRGCYC	2 cut(s)	773, 2366
Eco32I	GATATC	2 cut(s)	2295, 2494
Eco47I	GGWCC	1 cut(s)	1301
Eco57I	CTGAAG	6 cut(s)	836, 2067, 2097, 2211, 2213, 2628
Eco88I	CYCGRG	1 cut(s)	1344
Eco91I	GGTNACC	1 cut(s)	1860
EcoO109I	RGGNCCY	1 cut(s)	1301
EcoO65I	GGTNACC	1 cut(s)	1860
EcoRI	GAATTC	1 cut(s)	971
EcoRII	CCWGG	3 cut(s)	341, 1303, 1629
EcoRV	GATATC	2 cut(s)	2295, 2494
EcoT14I	CCWWGG	4 cut(s)	112, 1002, 1856, 2162
EcoT22I	ATGCAT	2 cut(s)	1218, 2104
EcoT38I	GRGCYC	2 cut(s)	773, 2366
EgeI	GGCGCC	1 cut(s)	30
EheI	GGCGCC	1 cut(s)	30
ErhI	CCWWGG	4 cut(s)	112, 1002, 1856, 2162
FalI	AAGNNNNNCTT	2 cut(s)	722, 754
FaqI	GGGAC	2 cut(s)	160, 1314
FauI	CCCGC	1 cut(s)	1139
FauNDI	CATATG	1 cut(s)	2176
Fnu4HI	GCNGC	5 cut(s)	118, 1083, 1241, 1721, 1847
FokI	GGATG	9 cut(s)	56, 287, 304, 948, 1114, 1307, 2335, 2583, 2683
FriOI	GRGCYC	2 cut(s)	773, 2366
Fsp4HI	GCNGC	5 cut(s)	118, 1083, 1241, 1721, 1847
FspBI	CTAG	8 cut(s)	636, 1193, 1419, 1565, 1980, 2009, 2163, 2604
GlaI	GCGC	1 cut(s)	30
GluI	GCNGC	5 cut(s)	118, 1083, 1241, 1721, 1847
GsaI	CCCAGC	4 cut(s)	47, 564, 588, 1812
HaeII	RGCGCY	1 cut(s)	32
HaeIII	GGCC	4 cut(s)	120, 1184, 1451, 1944
HapII	CCGG	1 cut(s)	144
HgaI	GACGC	1 cut(s)	2135
HhaI	GCGC	1 cut(s)	31
Hin1I	GRCGYC	1 cut(s)	29
Hin6I	GCGC	1 cut(s)	29
HinP1I	GCGC	1 cut(s)	29
HincII	GTYRAC	1 cut(s)	2660
HindII	GTYRAC	1 cut(s)	2660
HindIII	AAGCTT	1 cut(s)	1582
HpaII	CCGG	1 cut(s)	144
HphI	GGTGA	6 cut(s)	272, 338, 1685, 2044, 2404, 2660
Hpy166II	GTNNAC	3 cut(s)	2095, 2557, 2660
Hpy8I	GTNNAC	3 cut(s)	2095, 2557, 2660
HpyCH4III	ACNGT	7 cut(s)	711, 736, 1336, 2038, 2468, 2619, 2657
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1068, 1336, 2108
HpyF3I	CTNAG	7 cut(s)	161, 596, 892, 947, 1773, 1911, 2253
Hsp92I	GRCGYC	1 cut(s)	29
HspAI	GCGC	1 cut(s)	29
KasI	GGCGCC	1 cut(s)	28
Kzo9I	GATC	5 cut(s)	75, 1015, 1087, 1542, 2629
LmnI	GCTCC	6 cut(s)	205, 623, 1067, 1843, 2005, 2616
Lsp1109I	GCAGC	3 cut(s)	1069, 1252, 1732
LweI	GCATC	7 cut(s)	475, 837, 926, 1136, 2313, 2605, 2686
MaeI	CTAG	8 cut(s)	636, 1193, 1419, 1565, 1980, 2009, 2163, 2604
MaeIII	GTNAC	4 cut(s)	608, 1860, 1970, 2032
MalI	GATC	5 cut(s)	77, 1017, 1089, 1544, 2631
MbiI	CCGCTC	1 cut(s)	1846
MboI	GATC	5 cut(s)	75, 1015, 1087, 1542, 2629
MfeI	CAATTG	1 cut(s)	2211
MflI	RGATCY	1 cut(s)	1015
MhlI	GDGCHC	2 cut(s)	773, 2366
MlsI	TGGCCA	1 cut(s)	1451
MluNI	TGGCCA	1 cut(s)	1451
Mly113I	GGCGCC	1 cut(s)	29
MlyI	GAGTC	4 cut(s)	151, 449, 1193, 1214
MmeI	TCCRAC	3 cut(s)	668, 2326, 2624
Mox20I	TGGCCA	1 cut(s)	1451
Mph1103I	ATGCAT	2 cut(s)	1218, 2104
MroXI	GAANNNNTTC	3 cut(s)	782, 971, 2187
MscI	TGGCCA	1 cut(s)	1451
MseI	TTAA	6 cut(s)	309, 792, 1205, 1500, 2133, 2430
MslI	CAYNNNNRTG	1 cut(s)	534
Msp20I	TGGCCA	1 cut(s)	1451
MspA1I	CMGCKG	1 cut(s)	1243
MspI	CCGG	1 cut(s)	144
MspR9I	CCNGG	4 cut(s)	145, 343, 1305, 1631
MunI	CAATTG	1 cut(s)	2211
Mva1269I	GAATGC	1 cut(s)	304
MvaI	CCWGG	3 cut(s)	343, 1305, 1631
MvnI	CGCG	1 cut(s)	1134
MwoI	GCNNNNNNNGC	3 cut(s)	1068, 1336, 2108
NarI	GGCGCC	1 cut(s)	29
NciI	CCSGG	1 cut(s)	145
NdeI	CATATG	1 cut(s)	2176
NdeII	GATC	5 cut(s)	75, 1015, 1087, 1542, 2629
NlaIV	GGNNCC	7 cut(s)	30, 1000, 1063, 1077, 1302, 2043, 2263
NmeAIII	GCCGAG	1 cut(s)	403
NmuCI	GTSAC	2 cut(s)	608, 2032
NsiI	ATGCAT	2 cut(s)	1218, 2104
NspI	RCATGY	3 cut(s)	1216, 1713, 1796
PaeI	GCATGC	1 cut(s)	1216
PagI	TCATGA	2 cut(s)	84, 1995
PctI	GAATGC	1 cut(s)	304
PdmI	GAANNNNTTC	3 cut(s)	782, 971, 2187
PfeI	GAWTC	7 cut(s)	910, 1136, 1150, 2052, 2183, 2536, 2573
PflMI	CCANNNNNTGG	2 cut(s)	1058, 1595
PfoI	TCCNGGA	1 cut(s)	341
PkrI	GCNGC	5 cut(s)	119, 1084, 1242, 1722, 1848
PleI	GAGTC	4 cut(s)	151, 448, 1193, 1214
PluTI	GGCGCC	1 cut(s)	32
PpsI	GAGTC	4 cut(s)	151, 448, 1193, 1214
PpuMI	RGGWCCY	1 cut(s)	1301
PsiI	TTATAA	1 cut(s)	2694
Psp5II	RGGWCCY	1 cut(s)	1301
Psp6I	CCWGG	3 cut(s)	341, 1303, 1629
PspEI	GGTNACC	1 cut(s)	1860
PspFI	CCCAGC	4 cut(s)	43, 560, 584, 1808
PspGI	CCWGG	3 cut(s)	341, 1303, 1629
PspN4I	GGNNCC	7 cut(s)	30, 1000, 1063, 1077, 1302, 2043, 2263
PspPI	GGNCC	3 cut(s)	1183, 1301, 1943
PspPPI	RGGWCCY	1 cut(s)	1301
PsrI	GAACNNNNNNTAC	4 cut(s)	80, 112, 2172, 2204
PsuI	RGATCY	1 cut(s)	1015
PvuII	CAGCTG	1 cut(s)	1243
RsaI	GTAC	5 cut(s)	409, 1274, 2096, 2201, 2399
RsaNI	GTAC	5 cut(s)	408, 1273, 2095, 2200, 2398
RseI	CAYNNNNRTG	1 cut(s)	534
SaqAI	TTAA	6 cut(s)	309, 792, 1205, 1500, 2133, 2430
SatI	GCNGC	5 cut(s)	118, 1083, 1241, 1721, 1847
Sau3AI	GATC	5 cut(s)	75, 1015, 1087, 1542, 2629
Sau96I	GGNCC	3 cut(s)	1183, 1301, 1943
ScaI	AGTACT	1 cut(s)	1274
SchI	GAGTC	4 cut(s)	151, 449, 1193, 1214
ScrFI	CCNGG	4 cut(s)	145, 343, 1305, 1631
SduI	GDGCHC	2 cut(s)	773, 2366
SfaNI	GCATC	7 cut(s)	475, 837, 926, 1136, 2313, 2605, 2686
SfoI	GGCGCC	1 cut(s)	30
SinI	GGWCC	1 cut(s)	1301
SmiMI	CAYNNNNRTG	1 cut(s)	534
SmlI	CTYRAG	3 cut(s)	772, 1508, 2311
SmoI	CTYRAG	3 cut(s)	772, 1508, 2311
SphI	GCATGC	1 cut(s)	1216
SsiI	CCGC	4 cut(s)	117, 1132, 1312, 1846
SspDI	GGCGCC	1 cut(s)	28
SspI	AATATT	3 cut(s)	1165, 1264, 2528
SspMI	CTAG	8 cut(s)	636, 1193, 1419, 1565, 1980, 2009, 2163, 2604
StyD4I	CCNGG	4 cut(s)	143, 341, 1303, 1629
StyI	CCWWGG	4 cut(s)	112, 1002, 1856, 2162
TaaI	ACNGT	7 cut(s)	711, 736, 1336, 2038, 2468, 2619, 2657
TaqI	TCGA	7 cut(s)	78, 132, 569, 1357, 1962, 2124, 2426
TatI	WGTACW	5 cut(s)	407, 1272, 2094, 2199, 2397
TauI	GCSGC	2 cut(s)	120, 1849
TfiI	GAWTC	7 cut(s)	910, 1136, 1150, 2052, 2183, 2536, 2573
Tru1I	TTAA	6 cut(s)	309, 792, 1205, 1500, 2133, 2430
Tru9I	TTAA	6 cut(s)	309, 792, 1205, 1500, 2133, 2430
TscAI	CASTG	9 cut(s)	487, 1262, 1341, 1384, 1552, 1662, 2043, 2473, 2624
TseFI	GTSAC	2 cut(s)	608, 2032
TseI	GCWGC	3 cut(s)	1082, 1240, 1720
Tsp45I	GTSAC	2 cut(s)	608, 2032
TspGWI	ACGGA	2 cut(s)	1711, 2599
TspRI	CASTG	9 cut(s)	487, 1262, 1341, 1384, 1552, 1662, 2043, 2473, 2624
Van91I	CCANNNNNTGG	2 cut(s)	1058, 1595
VpaK11BI	GGWCC	1 cut(s)	1301
XapI	RAATTY	8 cut(s)	38, 263, 356, 781, 971, 2416, 2422, 2587
XbaI	TCTAGA	2 cut(s)	1418, 1979
XceI	RCATGY	3 cut(s)	1216, 1713, 1796
XmaJI	CCTAGG	1 cut(s)	2162
XmnI	GAANNNNTTC	3 cut(s)	782, 971, 2187
XspI	CTAG	8 cut(s)	636, 1193, 1419, 1565, 1980, 2009, 2163, 2604
ZrmI	AGTACT	1 cut(s)	1274
Zsp2I	ATGCAT	2 cut(s)	1218, 2104

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.