Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0006682

Physical Location & Seq

Genomic Coordinates Forward (+)

24897526 .. 24905051

Gene Structure 7526 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g31810.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1869 bp

ATGAGAGACCTCCTCACGGCGTTTAGTCCGTCGCTGGACTTGTTCGCCATTACTTCCGGCGACGGCAGAATCAAGATTTGGGATACAGTAAAGGGTCAAGTCCAGACTGAGTTTACGGATATAGTATCAGATGAAGACACAAGTATTTTTGCCAAAAGAGAAAGAGGGCATCTCTCTGTTGATTATACATGCATGAAATGGTTCACTTCTGAACGAAAGAAGAAAAGGAAGCTTGGGTGCTCATTGTTGGTTTTGGGTACTGGTGGTGGTGATGTGTTGGCTCTTGATGTGGCTGCTGGTCAGTCAAAATGGAGAGTTACTGATTGCCATGCTGGTCGTGTTAGTGCCATATCCTTTGCGAGGAGTGGCTCTTCTATTTATACTGCCGGTGCTGATGGGATGATATGTGAAATCGATTCACTGACAGGAAACCTGTTGGGGAAGTTCAAAGCATCCACAAAGGCAATATCCTCTATGTCTGTTTCAGCAGATGGGAAGATATTAGCAACTGCTGCTGCACAAATGAAGATATTGAATTTGGCTGACCACAAAAAGATACAGAAGTTTTCTGGCCATCCCGGAGCTGTTCGCTGTATGATCTTCACTGAGAATGGGAAGTACATTCTCTCATCTACCGCAGGTGAAAGGTATATTGCAGTATGGAATATAGATGGTGGAAAAAAGCAGTCAGCAAGTGCTGTCCTTGCAATGGAGCACCCTGCTGTCTTTCTTGATAGCAAGTGCATAGACAATGAGGAAGTTGGTGACACAGGTCTATATGTCTTGGCAATCTCAGAAGCTGGTGTTTGCTATTTTTGGTTTGGGAAGAATGCTGAGGAGTTATGGAATGCGAAGCCCACAAAAGTTTCAGTATCTTCTGAAGACAGTTTGTCTGAAACTCATAGGGCTTCACCTGCAATATTTGCTGCAGTTTTGCAAGGAATTGCTAAATCTGCTTCTGGGCAGATATTTGTTGCTTCTGGATTACCGGTGAAGCCATCATTCCAGAAACTTTTGGTGCATTCCAGTACAGACATAAAGCTGAGTAGCTCTCGTGATGGGGTTCTTCTACCAATGAGTCAGTCTCTTGTCAAATCCAAGAGAGGCCAAGATGTACAAAATAGAGTTGTTGCATTAGATCGTGCAAATGCAGAAGATGCTCTACTTCCGATTCCGAAGATCTTTGATTCGCATGGAAAAAAGAAAAAGCATGAAAAATTGCGCTTTGACAAAGACGAACTAATGGCCGATATGGAGGACAGCAGGACCCTCTCTGACCCTGTGAAGAGCAAAGATGGCACGGTAGAGTTTGAACTTGACACTGGAGCAATTTGTATGGAGGACCGGTTGAGATCATTAGGAATACTCAGTAAAGTAGATGACCCAACCATCAATTCCGCACTTAATTCTGCGGCATTTAAAAGTATTGACATTCAGACAAATATGTCACAAAAGAAGATGAGGGCGGCTGTACTGTCAATGGTACCTAGTGACGCATACAAGTTATTGGGAGTTTTGGTGGCCATTTGGCAAACAAGGTCTAGCAGTGGAAACTATGTCCTTCCATGGATATACTGCATATTGGTAAATCACAGTCATTATGTCATGTCAGAAGAGCCTCAGACCCAGGTGCTTAGTTCCTTGTTCAAGGTTACTAAATCTAGAAAGGCAGCTATTCAGCCTTTATTACAATTATCCGGTCGTTTGAAGCTTGTAATGGCACAGATTGAAAAGGCTACAAACACCGGAAGTCAAATTTTATCGCACGAGGACCAGAAGGATGGAAGTGAAGATGATGATGAAGATGAAAATGAAATTCACTACAGGGAAGATGACGACTCTGAAATAAGCAGCGATGATGAGCAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001650 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005730 GO:0006139 GO:0006355 GO:0006356 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016070 GO:0016072 GO:0019219 GO:0019222 GO:0022613 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044087 GO:0044089 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0045893 GO:0045935 GO:0045943 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0080090 GO:0090069 GO:0090070 GO:0090304 GO:1901360 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2000232 GO:2000234 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

Utp12 WD40

Protein Analysis

623

Amino Acids

67.89

Weight (kDa)

6.06

Isoelectric Point (pI)

40.21

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WD40_CDC20-Fz	PF24807	80 - 229	4e-13	CDC20/Fizzy WD40 domain
Beta-prop_THOC3	PF25174	81 - 177	1.1e-08	THOC3 beta-propeller domain
WDR55	PF24796	82 - 233	2.7e-11	WDR55
Beta-prop_WDR36-Utp21_2nd	PF25168	84 - 226	5.2e-07	WDR36/Utp21 second beta-propeller domain
Beta-prop_WDR3_1st	PF25173	91 - 226	2.2e-12	WDR3 first beta-propeller domain
WD40_Prp19	PF24814	101 - 224	1.6e-15	Prp19 WD40 domain
Beta-prop_WDR5	PF25175	109 - 228	5.6e-14	WDR5 beta-propeller domain
Beta-prop_EML_2	PF23414	111 - 233	1.8e-11	Echinoderm microtubule-associated protein second beta-propeller
WD40_WDHD1_1st	PF24817	116 - 235	6.5e-10	WDHD1 first WD40 domain
WD40_MABP1-WDR62_1st	PF24780	121 - 230	2e-07	MABP1/WDR62 first WD40 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0006682)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G11240
fragaria_vesca	FvH4_6g31810 FvH4_6g31810 FvH4_6g31810 FvH4_6g31810 FvH4_6g31810 FvH4_6g31810 FvH4_6g31810 FvH4_6g31810
malus_domestica	MD13G1161900.v1.1 MD16G1161700.v1.1
prunus_persica	Prupe.1G129200_v2.0.a1
pyrus_communis	pycom13g13800
rosa_chinensis	RchiOBHm_Chr4g0423831
rosa_laevigata	RLG00000007528
rosa_multiflora	Rmu_sc0003369.1_g000013 Rmu_sc0041036.1_g000001
rosa_roxburghii	Rroxscaffold_5G00365950
rosa_rugosa	Rorug04G0191100 Rorug04G0191200 Rorug04G0191200
rosa_samantha	Rh4AG250500 Rh4BG255800 Rh4CG264000 Rh4DG250300
rosa_wichuraiana	Rw4G021460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	629, 922
AasI	GACNNNNNNGTC	1 cut(s)	1444
Acc36I	ACCTGC	2 cut(s)	629, 922
Acc65I	GGTACC	1 cut(s)	1483
AccB1I	GGYRCC	1 cut(s)	1483
AciI	CCGC	4 cut(s)	636, 1398, 1412, 1466
AcoI	YGGCCR	3 cut(s)	571, 1245, 1521
AcsI	RAATTY	3 cut(s)	535, 1755, 1815
AcuI	CTGAAG	1 cut(s)	900
AfaI	GTAC	6 cut(s)	259, 620, 1030, 1116, 1473, 1485
AfiI	CCNNNNNNNGG	3 cut(s)	16, 360, 709
AgeI	ACCGGT	2 cut(s)	988, 1344
AgsI	TTSAA	6 cut(s)	448, 535, 1313, 1648, 1708, 1730
AhdI	GACNNNNNGTC	1 cut(s)	889
AjnI	CCWGG	1 cut(s)	1626
AjuI	GAANNNNNNNTTGG	4 cut(s)	61, 93, 1378, 1410
AluBI	AGCT	7 cut(s)	232, 584, 800, 1042, 1050, 1673, 1711
AluI	AGCT	7 cut(s)	232, 584, 800, 1042, 1050, 1673, 1711
Alw21I	GWGCWC	2 cut(s)	242, 717
Alw26I	GTCTC	1 cut(s)	1089
AlwNI	CAGNNNCTG	1 cut(s)	800
AoxI	GGCC	4 cut(s)	571, 1105, 1245, 1521
ApeKI	GCWGC	6 cut(s)	293, 512, 515, 926, 1670, 1851
ApoI	RAATTY	3 cut(s)	535, 1755, 1815
AsiGI	ACCGGT	2 cut(s)	988, 1344
Asp700I	GAANNNNTTC	1 cut(s)	200
Asp718I	GGTACC	1 cut(s)	1483
AspLEI	GCGC	1 cut(s)	1224
AspS9I	GGNCC	3 cut(s)	1266, 1342, 1771
AsuC2I	CCSGG	1 cut(s)	579
AsuHPI	GGTGA	5 cut(s)	281, 653, 776, 903, 1003
AvaII	GGWCC	3 cut(s)	1266, 1342, 1771
BaeI	ACNNNNGTAYC	2 cut(s)	548, 581
BalI	TGGCCA	2 cut(s)	573, 1523
BanI	GGYRCC	1 cut(s)	1483
BarI	GAAGNNNNNNTAC	2 cut(s)	1146, 1178
BauI	CACGAG	2 cut(s)	1053, 1766
BbsI	GAAGAC	2 cut(s)	141, 888
Bbv12I	GWGCWC	2 cut(s)	242, 717
BbvCI	CCTCAGC	1 cut(s)	834
BbvI	GCAGC	6 cut(s)	280, 499, 502, 913, 1682, 1863
BccI	CCATC	9 cut(s)	389, 485, 582, 665, 1006, 1052, 1289, 1397, 1775
BceAI	ACGGC	2 cut(s)	33, 79
BciT130I	CCWGG	1 cut(s)	1628
BciVI	GTATCC	1 cut(s)	76
BcnI	CCSGG	1 cut(s)	579
BcoDI	GTCTC	1 cut(s)	1089
BfaI	CTAG	3 cut(s)	1488, 1542, 1662
BfmI	CTRYAG	2 cut(s)	927, 1822
BfuAI	ACCTGC	2 cut(s)	629, 922
BfuI	GTATCC	1 cut(s)	76
BglII	AGATCT	1 cut(s)	1179
BisI	GCNGC	8 cut(s)	294, 513, 516, 927, 1413, 1467, 1671, 1852
BlsI	GCNGC	8 cut(s)	295, 514, 517, 928, 1414, 1468, 1672, 1853
Bme1390I	CCNGG	2 cut(s)	579, 1628
Bme18I	GGWCC	3 cut(s)	1266, 1342, 1771
BmeRI	GACNNNNNGTC	1 cut(s)	889
BmgT120I	GGNCC	3 cut(s)	1266, 1342, 1771
BmiI	GGNNCC	2 cut(s)	1268, 1485
BmrFI	CCNGG	2 cut(s)	579, 1628
BmsI	GCATC	3 cut(s)	178, 461, 1147
BoxI	GACNNNNGTC	1 cut(s)	771
BpiI	GAAGAC	2 cut(s)	141, 888
BplI	GAGNNNNNCTC	7 cut(s)	29, 156, 188, 1036, 1068, 1069, 1101
BpmI	CTGGAG	1 cut(s)	1344
Bpu10I	CCTNAGC	1 cut(s)	834
BpuMI	CCSGG	1 cut(s)	579
Bsa29I	ATCGAT	1 cut(s)	414
BsaJI	CCNNGG	2 cut(s)	1565, 1626
BsaWI	WCCGGW	4 cut(s)	988, 1344, 1697, 1745
BsaXI	ACNNNNNCTCC	4 cut(s)	1331, 1361, 1503, 1533
Bsc4I	CCNNNNNNNGG	3 cut(s)	16, 360, 709
Bse118I	RCCGGY	3 cut(s)	386, 988, 1344
Bse1I	ACTGG	3 cut(s)	265, 1026, 1327
Bse3DI	GCAATG	1 cut(s)	714
BseBI	CCWGG	1 cut(s)	1628
BseCI	ATCGAT	1 cut(s)	414
BseDI	CCNNGG	2 cut(s)	1565, 1626
BseGI	GGATG	4 cut(s)	405, 452, 574, 1786
BseLI	CCNNNNNNNGG	3 cut(s)	16, 360, 709
BseMI	GCAATG	1 cut(s)	714
BseMII	CTCAG	7 cut(s)	99, 597, 807, 825, 1034, 1381, 1634
BseNI	ACTGG	3 cut(s)	265, 1026, 1327
BseRI	GAGGAG	2 cut(s)	376, 851
BseXI	GCAGC	6 cut(s)	280, 499, 502, 913, 1682, 1863
BsgI	GTGCAG	1 cut(s)	501
Bsh1285I	CGRYCG	1 cut(s)	1702
BshFI	GGCC	4 cut(s)	573, 1107, 1247, 1523
BshNI	GGYRCC	1 cut(s)	1483
BshTI	ACCGGT	2 cut(s)	988, 1344
BshVI	ATCGAT	1 cut(s)	414
BsiEI	CGRYCG	1 cut(s)	1702
BsiHKAI	GWGCWC	2 cut(s)	242, 717
BsiSI	CCGG	7 cut(s)	57, 387, 579, 989, 1345, 1698, 1746
BslI	CCNNNNNNNGG	3 cut(s)	16, 360, 709
BsmAI	GTCTC	1 cut(s)	1089
BsmI	GAATGC	3 cut(s)	835, 853, 1021
BsnI	GGCC	4 cut(s)	573, 1107, 1247, 1523
Bsp1286I	GDGCHC	2 cut(s)	242, 717
Bsp1407I	TGTACA	1 cut(s)	1114
Bsp143I	GATC	4 cut(s)	597, 1138, 1179, 1352
Bsp19I	CCATGG	1 cut(s)	1565
BspACI	CCGC	4 cut(s)	636, 1398, 1412, 1466
BspANI	GGCC	4 cut(s)	573, 1107, 1247, 1523
BspCNI	CTCAG	7 cut(s)	100, 598, 806, 826, 1035, 1380, 1633
BspDI	ATCGAT	1 cut(s)	414
BspLI	GGNNCC	2 cut(s)	1268, 1485
BspMAI	CTGCAG	1 cut(s)	931
BspMI	ACCTGC	2 cut(s)	629, 922
BspQI	GCTCTTC	3 cut(s)	376, 1280, 1608
BspT107I	GGYRCC	1 cut(s)	1483
BsrDI	GCAATG	1 cut(s)	714
BsrFI	RCCGGY	3 cut(s)	386, 988, 1344
BsrGI	TGTACA	1 cut(s)	1114
BsrI	ACTGG	3 cut(s)	265, 1026, 1327
BssAI	RCCGGY	3 cut(s)	386, 988, 1344
BssECI	CCNNGG	2 cut(s)	1565, 1626
BssMI	GATC	4 cut(s)	597, 1138, 1179, 1352
BssSI	CACGAG	2 cut(s)	1053, 1766
BssT1I	CCWWGG	1 cut(s)	1565
Bst2BI	CACGAG	2 cut(s)	1053, 1766
Bst2UI	CCWGG	1 cut(s)	1628
Bst4CI	ACNGT	5 cut(s)	88, 887, 1303, 1476, 1595
Bst6I	CTCTTC	3 cut(s)	376, 1280, 1608
BstAPI	GCANNNNNTGC	3 cut(s)	512, 923, 1157
BstAUI	TGTACA	1 cut(s)	1114
BstDEI	CTNAG	8 cut(s)	108, 606, 793, 834, 1043, 1367, 1620, 1634
BstDSI	CCRYGG	1 cut(s)	1565
BstENI	CCTNNNNNAGG	1 cut(s)	358
BstF5I	GGATG	4 cut(s)	405, 452, 574, 1786
BstHHI	GCGC	1 cut(s)	1224
BstKTI	GATC	4 cut(s)	600, 1141, 1182, 1355
BstMAI	GTCTC	1 cut(s)	1089
BstMBI	GATC	4 cut(s)	597, 1138, 1179, 1352
BstMCI	CGRYCG	1 cut(s)	1702
BstMWI	GCNNNNNNNGC	7 cut(s)	512, 704, 914, 923, 953, 1157, 1296
BstNI	CCWGG	1 cut(s)	1628
BstNSI	RCATGY	1 cut(s)	192
BstPAI	GACNNNNGTC	1 cut(s)	771
BstSCI	CCNGG	2 cut(s)	577, 1626
BstSFI	CTRYAG	2 cut(s)	927, 1822
BstV1I	GCAGC	6 cut(s)	280, 499, 502, 913, 1682, 1863
BstV2I	GAAGAC	2 cut(s)	141, 888
BstX2I	RGATCY	1 cut(s)	1179
BstXI	CCANNNNNNTGG	1 cut(s)	1781
BstYI	RGATCY	1 cut(s)	1179
Bsu15I	ATCGAT	1 cut(s)	414
BsuI	GTATCC	1 cut(s)	76
BsuRI	GGCC	4 cut(s)	573, 1107, 1247, 1523
BsuTUI	ATCGAT	1 cut(s)	414
BtgI	CCRYGG	1 cut(s)	1565
BtsCI	GGATG	4 cut(s)	405, 452, 574, 1786
BtsI	GCAGTG	1 cut(s)	1552
BtsIMutI	CAGTG	4 cut(s)	419, 603, 1320, 1552
BveI	ACCTGC	2 cut(s)	629, 922
CaiI	CAGNNNCTG	1 cut(s)	800
CfoI	GCGC	1 cut(s)	1224
Cfr10I	RCCGGY	3 cut(s)	386, 988, 1344
Cfr13I	GGNCC	3 cut(s)	1266, 1342, 1771
ClaI	ATCGAT	1 cut(s)	414
CseI	GACGC	1 cut(s)	1502
Csp6I	GTAC	6 cut(s)	258, 619, 1029, 1115, 1472, 1484
CspAI	ACCGGT	2 cut(s)	988, 1344
CviAII	CATG	7 cut(s)	189, 193, 329, 1193, 1211, 1566, 1606
CviQI	GTAC	6 cut(s)	258, 619, 1029, 1115, 1472, 1484
DdeI	CTNAG	8 cut(s)	108, 606, 793, 834, 1043, 1367, 1620, 1634
DpnI	GATC	4 cut(s)	599, 1140, 1181, 1354
DpnII	GATC	4 cut(s)	597, 1138, 1179, 1352
DraI	TTTAAA	1 cut(s)	1420
DrdI	GACNNNNNNGTC	1 cut(s)	1444
DriI	GACNNNNNGTC	1 cut(s)	889
DseDI	GACNNNNNNGTC	1 cut(s)	1444
EaeI	YGGCCR	3 cut(s)	571, 1245, 1521
Eam1104I	CTCTTC	3 cut(s)	376, 1280, 1608
Eam1105I	GACNNNNNGTC	1 cut(s)	889
EarI	CTCTTC	3 cut(s)	376, 1280, 1608
Eco130I	CCWWGG	1 cut(s)	1565
Eco47I	GGWCC	3 cut(s)	1266, 1342, 1771
Eco57I	CTGAAG	1 cut(s)	900
EcoNI	CCTNNNNNAGG	1 cut(s)	358
EcoO109I	RGGNCCY	1 cut(s)	1266
EcoRII	CCWGG	1 cut(s)	1626
EcoT14I	CCWWGG	1 cut(s)	1565
EcoT22I	ATGCAT	1 cut(s)	194
ErhI	CCWWGG	1 cut(s)	1565
FaeI	CATG	7 cut(s)	192, 196, 332, 1196, 1214, 1569, 1609
FatI	CATG	7 cut(s)	188, 192, 328, 1192, 1210, 1565, 1605
Fnu4HI	GCNGC	8 cut(s)	294, 513, 516, 927, 1413, 1467, 1671, 1852
FokI	GGATG	4 cut(s)	412, 439, 561, 1793
Fsp4HI	GCNGC	8 cut(s)	294, 513, 516, 927, 1413, 1467, 1671, 1852
FspBI	CTAG	3 cut(s)	1488, 1542, 1662
GlaI	GCGC	1 cut(s)	1223
GluI	GCNGC	8 cut(s)	294, 513, 516, 927, 1413, 1467, 1671, 1852
GsuI	CTGGAG	1 cut(s)	1344
HaeIII	GGCC	4 cut(s)	573, 1107, 1247, 1523
HapII	CCGG	7 cut(s)	57, 387, 579, 989, 1345, 1698, 1746
HgaI	GACGC	1 cut(s)	1502
HhaI	GCGC	1 cut(s)	1224
Hin1II	CATG	7 cut(s)	192, 196, 332, 1196, 1214, 1569, 1609
Hin6I	GCGC	1 cut(s)	1222
HinP1I	GCGC	1 cut(s)	1222
HindIII	AAGCTT	2 cut(s)	230, 1709
HinfI	GANTC	6 cut(s)	69, 416, 1078, 1171, 1187, 1838
HpaII	CCGG	7 cut(s)	57, 387, 579, 989, 1345, 1698, 1746
HphI	GGTGA	5 cut(s)	281, 653, 776, 903, 1003
Hpy166II	GTNNAC	2 cut(s)	114, 204
Hpy188III	TCNNGA	8 cut(s)	73, 103, 284, 731, 981, 1006, 1055, 1662
Hpy8I	GTNNAC	2 cut(s)	114, 204
Hpy99I	CGWCG	2 cut(s)	34, 65
HpyAV	CCTTC	2 cut(s)	1571, 1771
HpyCH4III	ACNGT	5 cut(s)	88, 887, 1303, 1476, 1595
HpyF10VI	GCNNNNNNNGC	7 cut(s)	512, 704, 914, 923, 953, 1157, 1296
HpyF3I	CTNAG	8 cut(s)	108, 606, 793, 834, 1043, 1367, 1620, 1634
Hsp92II	CATG	7 cut(s)	192, 196, 332, 1196, 1214, 1569, 1609
HspAI	GCGC	1 cut(s)	1222
KpnI	GGTACC	1 cut(s)	1487
Kzo9I	GATC	4 cut(s)	597, 1138, 1179, 1352
LguI	GCTCTTC	3 cut(s)	376, 1280, 1608
LmnI	GCTCC	3 cut(s)	581, 712, 1325
Lsp1109I	GCAGC	6 cut(s)	280, 499, 502, 913, 1682, 1863
LweI	GCATC	3 cut(s)	178, 461, 1147
MaeI	CTAG	3 cut(s)	1488, 1542, 1662
MaeIII	GTNAC	5 cut(s)	316, 764, 1446, 1490, 1651
MalI	GATC	4 cut(s)	599, 1140, 1181, 1354
MboI	GATC	4 cut(s)	597, 1138, 1179, 1352
MflI	RGATCY	1 cut(s)	1179
MhlI	GDGCHC	2 cut(s)	242, 717
MlsI	TGGCCA	2 cut(s)	573, 1523
MluCI	AATT	9 cut(s)	535, 942, 1217, 1329, 1393, 1405, 1691, 1755, 1815
MluNI	TGGCCA	2 cut(s)	573, 1523
MlyI	GAGTC	2 cut(s)	1087, 1832
Mox20I	TGGCCA	2 cut(s)	573, 1523
Mph1103I	ATGCAT	1 cut(s)	194
MroXI	GAANNNNTTC	1 cut(s)	200
MscI	TGGCCA	2 cut(s)	573, 1523
MseI	TTAA	2 cut(s)	1404, 1419
Msp20I	TGGCCA	2 cut(s)	573, 1523
MspI	CCGG	7 cut(s)	57, 387, 579, 989, 1345, 1698, 1746
MspR9I	CCNGG	2 cut(s)	579, 1628
Mva1269I	GAATGC	3 cut(s)	835, 853, 1021
MvaI	CCWGG	1 cut(s)	1628
MwoI	GCNNNNNNNGC	7 cut(s)	512, 704, 914, 923, 953, 1157, 1296
NciI	CCSGG	1 cut(s)	579
NcoI	CCATGG	1 cut(s)	1565
NdeII	GATC	4 cut(s)	597, 1138, 1179, 1352
NlaIII	CATG	7 cut(s)	192, 196, 332, 1196, 1214, 1569, 1609
NlaIV	GGNNCC	2 cut(s)	1268, 1485
NmuCI	GTSAC	3 cut(s)	764, 1446, 1490
NsiI	ATGCAT	1 cut(s)	194
NspI	RCATGY	1 cut(s)	192
PaqCI	CACCTGC	2 cut(s)	629, 922
PciSI	GCTCTTC	3 cut(s)	376, 1280, 1608
PctI	GAATGC	3 cut(s)	835, 853, 1021
PdmI	GAANNNNTTC	1 cut(s)	200
PfeI	GAWTC	4 cut(s)	69, 416, 1171, 1187
PfoI	TCCNGGA	1 cut(s)	577
PinAI	ACCGGT	2 cut(s)	988, 1344
PkrI	GCNGC	8 cut(s)	295, 514, 517, 928, 1414, 1468, 1672, 1853
PleI	GAGTC	2 cut(s)	1086, 1832
PpsI	GAGTC	2 cut(s)	1086, 1832
PpuMI	RGGWCCY	1 cut(s)	1266
PshAI	GACNNNNGTC	1 cut(s)	771
Psp5II	RGGWCCY	1 cut(s)	1266
Psp6I	CCWGG	1 cut(s)	1626
PspGI	CCWGG	1 cut(s)	1626
PspN4I	GGNNCC	2 cut(s)	1268, 1485
PspPI	GGNCC	3 cut(s)	1266, 1342, 1771
PspPPI	RGGWCCY	1 cut(s)	1266
PstI	CTGCAG	1 cut(s)	931
PstNI	CAGNNNCTG	1 cut(s)	800
PsuI	RGATCY	1 cut(s)	1179
RsaI	GTAC	6 cut(s)	259, 620, 1030, 1116, 1473, 1485
RsaNI	GTAC	6 cut(s)	258, 619, 1029, 1115, 1472, 1484
SapI	GCTCTTC	3 cut(s)	376, 1280, 1608
SaqAI	TTAA	2 cut(s)	1404, 1419
SatI	GCNGC	8 cut(s)	294, 513, 516, 927, 1413, 1467, 1671, 1852
Sau3AI	GATC	4 cut(s)	597, 1138, 1179, 1352
Sau96I	GGNCC	3 cut(s)	1266, 1342, 1771
SchI	GAGTC	2 cut(s)	1087, 1832
ScrFI	CCNGG	2 cut(s)	579, 1628
SduI	GDGCHC	2 cut(s)	242, 717
SfaNI	GCATC	3 cut(s)	178, 461, 1147
SfcI	CTRYAG	2 cut(s)	927, 1822
SinI	GGWCC	3 cut(s)	1266, 1342, 1771
Sse9I	AATT	9 cut(s)	535, 942, 1217, 1329, 1393, 1405, 1691, 1755, 1815
SsiI	CCGC	4 cut(s)	636, 1398, 1412, 1466
SspI	AATATT	1 cut(s)	921
SspMI	CTAG	3 cut(s)	1488, 1542, 1662
StyD4I	CCNGG	2 cut(s)	577, 1626
StyI	CCWWGG	1 cut(s)	1565
TaaI	ACNGT	5 cut(s)	88, 887, 1303, 1476, 1595
TaqI	TCGA	1 cut(s)	414
TasI	AATT	9 cut(s)	535, 942, 1217, 1329, 1393, 1405, 1691, 1755, 1815
TatI	WGTACW	4 cut(s)	618, 1028, 1114, 1471
TauI	GCSGC	2 cut(s)	1415, 1469
TfiI	GAWTC	4 cut(s)	69, 416, 1171, 1187
Tru1I	TTAA	2 cut(s)	1404, 1419
Tru9I	TTAA	2 cut(s)	1404, 1419
TscAI	CASTG	4 cut(s)	426, 610, 1327, 1552
TseFI	GTSAC	3 cut(s)	764, 1446, 1490
TseI	GCWGC	6 cut(s)	293, 512, 515, 926, 1670, 1851
Tsp45I	GTSAC	3 cut(s)	764, 1446, 1490
TspDTI	ATGAA	7 cut(s)	147, 209, 539, 1227, 1815, 1821, 1827
TspGWI	ACGGA	2 cut(s)	18, 131
TspRI	CASTG	4 cut(s)	426, 610, 1327, 1552
VpaK11BI	GGWCC	3 cut(s)	1266, 1342, 1771
XagI	CCTNNNNNAGG	1 cut(s)	358
XapI	RAATTY	3 cut(s)	535, 1755, 1815
XbaI	TCTAGA	1 cut(s)	1661
XceI	RCATGY	1 cut(s)	192
XmnI	GAANNNNTTC	1 cut(s)	200
XspI	CTAG	3 cut(s)	1488, 1542, 1662
Zsp2I	ATGCAT	1 cut(s)	194

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.