Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0006682

Physical Location & Seq

Genomic Coordinates Forward (+)

47672043 .. 47677697

Gene Structure 5655 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00365950.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1974 bp

ATGGCCCCGTCAAACATCAGAGACCTCTTGACGGCGTTTAATCCGTCGTTGGACTTGTTCGCCATTACTTCCGGCGACGGTCGAATCAAGATTTGGGACACTGTGAAGGGTCAAGTTCAGACTGAGTTTACAGACATAGTATCAGAGGAAGATACAAGTATATTTGCCAAAAGAGAAAGAGGGCATCTCTCAGTTGATTACACTTGCATGAAATGGTTCACTTCTGAAAGAAAGAAGAAAAGGAAGCTTGGGTGCTCATTGTTGGTTTTGGGAACTGGTGGTGGTGATGTATTGGCTCTTGATGTGGCTGCTGGTCAATCGAAATGGAGGGTTACCGATTGCCATGCAGGTCGTGTTAGTGCAATATCGTTTGCAAGAAGTGGTTCTTCTATTTACACTGCCGGTGCTGATGGGATGATTTGCGAAATCGATTCGCTTACAGGAAACCTGTTGGGGAAGTTCAAAGCTTCGACAAAGGCAATCTCCTCTATATGTGGGATGCAGTGTTGTTTGGTCCGTAATGAAGTTGAATATGATGGGAAGATACTAGCTACTGCAGCTGCACAAATGAAGATATTGAATTTGTCTGACCACAAAAAGATACAGAAGTTTTCCGGCCATCCTGGAGCTGTTCGCTGTATGATCTTCACTGAGAATGGGAAGTACATTCTCTCATCTGCAGTTGGTGAAAGGTATATTGCAGTATGGAATATAGATGGTGGGAAAAAGCAGTCAGCAAGTGCTGTTCTCACAATGGAGCACCCTGCTGTGTTCCTTGATAGCAGGTGCATAGACAGTGGGGAAGTTGGTGATGCAGGTCTATATGTCTTAGCAATCTCAGAAGTTGGCGTTTGTTATTTTTGGTTTGGAAAGAATGCTGAAGAATTACGGAATGCCAAGCCTACAAAAATTTCAGTATCTTCTGAAGACAGTTTGTCTGAAACTCATAGGGGTTCACCTGCAATATTTGCTGCAATTTTACAAGGAATTGCCAAATCAGCTTCTGGGCAGATATTTGTTGCTTCTGGATTACCAGTGAAGCCATCATTCCAAAAACTTTTGGTGCATTCTGGTACTGACATAAAGTTGAGTAGCTCCCGTGATGGGGTTCTTCTACCAATGAGTCAGTCTCTTGTCAAATCCAAGAGAGGCCAAGATGTACAAAATAGAGTTGTTGCATTAGATCGTGCAAATGCAGAAGATGCCCTACTTCCGATTCCAAAGATCTTTGATTCGCATGAAAAAAAGAAAAAGCATGAAAAATTGCGCTTTGACAAAGACGAAGTAATGACTGATTTGGAGGACAGCAGGAGTCTCTCTGGCCCTGTGAAGACCAAAGTGGCACAGAAGATATCTGATGATGGGCTTGGTATTTTTGCTATCCTGGTATGTGCAGATGGCACGGTAGAATTTGAACTTGACACTGGAGCAATTTGCATGGAGGACCGGTTGAGATCATTAGGAATACTCAGTAAAATAGATGACCAAACAATCAAATCCACACTAAATTCTGCAGCATTTAAGAGTATTGACATTCAGACAAATATGCCACAAAAGAAGATGAGGGCAGCTGTACTGTCAATGGTACCTAGTGACGCATACAAGTTATTGGGAGTTTTGGTGGCCATTTGGCAAACAAGGTCTAGCGGTGGAAATTATGTACTTCCATGGATATACAGCATATTGGTAAATCACAGTCATTATGTCATGTCAGAAGAACCTGAGACCCAGGTGCTTAGTTCCTTGTTCAAGGTCACGAAATCTAGAAAGGCAGCTATTCAGCCTTTATTACAATTATCCGGTCGTTTGCAGCTTGTAGTGGCACAGATTGACAAGGCAACAAACACCAGAAATCAAATTTTATTGCATGAGGACCAGAAGGATGAAAGTGAAGATGAGGATGAAGATGTAAATGAAATTCACTTCAGGGAAGAAGATGATGACTCTGAAATAAGCAGTGACGATGAGCAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001650 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005730 GO:0006139 GO:0006355 GO:0006356 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016070 GO:0016072 GO:0019219 GO:0019222 GO:0022613 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044087 GO:0044089 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0045893 GO:0045935 GO:0045943 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0080090 GO:0090069 GO:0090070 GO:0090304 GO:1901360 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2000232 GO:2000234 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

Utp12 WD40

Protein Analysis

657

Amino Acids

71.86

Weight (kDa)

5.99

Isoelectric Point (pI)

40.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WD40_CDC20-Fz	PF24807	85 - 244	2.4e-09	CDC20/Fizzy WD40 domain
WDR55	PF24796	87 - 249	5.5e-08	WDR55
Beta-prop_WDR3_1st	PF25173	95 - 238	3.5e-08	WDR3 first beta-propeller domain
WD40_Prp19	PF24814	106 - 239	7.9e-12	Prp19 WD40 domain
WD40_WDHD1_1st	PF24817	176 - 248	3.9e-06	WDHD1 first WD40 domain
Utp12	PF04003	515 - 606	3e-09	Dip2/Utp12 Family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006682)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G11240
fragaria_vesca	FvH4_6g31810 FvH4_6g31810 FvH4_6g31810 FvH4_6g31810 FvH4_6g31810 FvH4_6g31810 FvH4_6g31810 FvH4_6g31810
malus_domestica	MD13G1161900.v1.1 MD16G1161700.v1.1
prunus_persica	Prupe.1G129200_v2.0.a1
pyrus_communis	pycom13g13800
rosa_chinensis	RchiOBHm_Chr4g0423831
rosa_laevigata	RLG00000007528
rosa_multiflora	Rmu_sc0003369.1_g000013 Rmu_sc0041036.1_g000001
rosa_roxburghii	Rroxscaffold_5G00365950
rosa_rugosa	Rorug04G0191100 Rorug04G0191200 Rorug04G0191200
rosa_samantha	Rh4AG250500 Rh4BG255800 Rh4CG264000 Rh4DG250300
rosa_wichuraiana	Rw4G021460

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	774, 967
Acc36I	ACCTGC	4 cut(s)	338, 774, 806, 967
Acc65I	GGTACC	1 cut(s)	1585
AccB1I	GGYRCC	1 cut(s)	1585
AciI	CCGC	1 cut(s)	1647
AcoI	YGGCCR	2 cut(s)	616, 1623
AcsI	RAATTY	6 cut(s)	580, 909, 1409, 1507, 1857, 1917
AcuI	CTGAAG	3 cut(s)	900, 945, 1909
AfaI	GTAC	6 cut(s)	665, 1075, 1161, 1575, 1587, 1662
AfiI	CCNNNNNNNGG	3 cut(s)	31, 1104, 1105
AgeI	ACCGGT	1 cut(s)	1446
AgsI	TTSAA	5 cut(s)	463, 530, 580, 1415, 1750
AhdI	GACNNNNNGTC	1 cut(s)	934
AjnI	CCWGG	3 cut(s)	622, 1383, 1728
AjuI	GAANNNNNNNTTGG	2 cut(s)	76, 108
Alw21I	GWGCWC	2 cut(s)	257, 762
Alw26I	GTCTC	4 cut(s)	15, 1134, 1319, 1718
AlwNI	CAGNNNCTG	1 cut(s)	1004
AoxI	GGCC	5 cut(s)	3, 616, 1150, 1321, 1623
ApeKI	GCWGC	8 cut(s)	308, 557, 560, 971, 1514, 1568, 1772, 1810
ApoI	RAATTY	6 cut(s)	580, 909, 1409, 1507, 1857, 1917
AsiGI	ACCGGT	1 cut(s)	1446
Asp700I	GAANNNNTTC	2 cut(s)	215, 382
Asp718I	GGTACC	1 cut(s)	1585
AspLEI	GCGC	1 cut(s)	1269
AspS9I	GGNCC	5 cut(s)	4, 514, 1322, 1444, 1873
AsuHPI	GGTGA	4 cut(s)	296, 698, 821, 948
AvaII	GGWCC	3 cut(s)	514, 1444, 1873
BaeI	ACNNNNGTAYC	2 cut(s)	593, 626
BalI	TGGCCA	1 cut(s)	1625
BanI	GGYRCC	1 cut(s)	1585
BarI	GAAGNNNNNNTAC	2 cut(s)	1191, 1223
BbsI	GAAGAC	2 cut(s)	933, 1337
Bbv12I	GWGCWC	2 cut(s)	257, 762
BbvI	GCAGC	8 cut(s)	295, 547, 569, 958, 1526, 1580, 1784, 1822
BccI	CCATC	8 cut(s)	404, 530, 627, 710, 1051, 1097, 1355, 1391
BceAI	ACGGC	1 cut(s)	48
BcgI	CGANNNNNNTGC	2 cut(s)	326, 360
BciT130I	CCWGG	3 cut(s)	624, 1385, 1730
BcoDI	GTCTC	4 cut(s)	15, 1134, 1319, 1718
BfaI	CTAG	4 cut(s)	548, 1590, 1644, 1764
BfmI	CTRYAG	3 cut(s)	555, 678, 1512
BfuAI	ACCTGC	4 cut(s)	338, 774, 806, 967
BglII	AGATCT	1 cut(s)	1224
BisI	GCNGC	8 cut(s)	309, 558, 561, 972, 1515, 1569, 1773, 1811
BlsI	GCNGC	8 cut(s)	310, 559, 562, 973, 1516, 1570, 1774, 1812
Bme1390I	CCNGG	3 cut(s)	624, 1385, 1730
Bme18I	GGWCC	3 cut(s)	514, 1444, 1873
BmeRI	GACNNNNNGTC	1 cut(s)	934
BmgT120I	GGNCC	5 cut(s)	4, 514, 1322, 1444, 1873
BmiI	GGNNCC	2 cut(s)	6, 1587
BmrFI	CCNGG	3 cut(s)	624, 1385, 1730
BmsI	GCATC	4 cut(s)	193, 489, 802, 1192
BpiI	GAAGAC	2 cut(s)	933, 1337
BplI	GAGNNNNNCTC	4 cut(s)	171, 203, 1114, 1146
BpmI	CTGGAG	2 cut(s)	645, 1446
Bsa29I	ATCGAT	1 cut(s)	429
BsaI	GGTCTC	2 cut(s)	15, 1718
BsaJI	CCNNGG	2 cut(s)	1667, 1728
BsaWI	WCCGGW	2 cut(s)	1446, 1799
BsaXI	ACNNNNNCTCC	4 cut(s)	1433, 1463, 1605, 1635
Bsc4I	CCNNNNNNNGG	3 cut(s)	31, 1104, 1105
Bse118I	RCCGGY	2 cut(s)	401, 1446
Bse1I	ACTGG	3 cut(s)	280, 1034, 1429
BseBI	CCWGG	3 cut(s)	624, 1385, 1730
BseCI	ATCGAT	1 cut(s)	429
BseDI	CCNNGG	2 cut(s)	1667, 1728
BseGI	GGATG	5 cut(s)	420, 504, 619, 1888, 1906
BseLI	CCNNNNNNNGG	3 cut(s)	31, 1104, 1105
BseMII	CTCAG	6 cut(s)	114, 204, 642, 852, 1483, 1713
BseNI	ACTGG	3 cut(s)	280, 1034, 1429
BseRI	GAGGAG	1 cut(s)	475
BseXI	GCAGC	8 cut(s)	295, 547, 569, 958, 1526, 1580, 1784, 1822
BsgI	GTGCAG	2 cut(s)	546, 1413
Bsh1285I	CGRYCG	2 cut(s)	82, 1804
BshFI	GGCC	5 cut(s)	5, 618, 1152, 1323, 1625
BshNI	GGYRCC	1 cut(s)	1585
BshTI	ACCGGT	1 cut(s)	1446
BshVI	ATCGAT	1 cut(s)	429
BsiEI	CGRYCG	2 cut(s)	82, 1804
BsiHKAI	GWGCWC	2 cut(s)	257, 762
BsiSI	CCGG	5 cut(s)	72, 402, 615, 1447, 1800
BslFI	GGGAC	1 cut(s)	110
BslI	CCNNNNNNNGG	3 cut(s)	31, 1104, 1105
BsmAI	GTCTC	4 cut(s)	15, 1134, 1319, 1718
BsmFI	GGGAC	1 cut(s)	110
BsmI	GAATGC	3 cut(s)	880, 898, 1066
BsnI	GGCC	5 cut(s)	5, 618, 1152, 1323, 1625
Bso31I	GGTCTC	2 cut(s)	15, 1718
Bsp1286I	GDGCHC	2 cut(s)	257, 762
Bsp1407I	TGTACA	1 cut(s)	1159
Bsp143I	GATC	4 cut(s)	642, 1183, 1224, 1454
Bsp19I	CCATGG	1 cut(s)	1667
BspACI	CCGC	1 cut(s)	1647
BspANI	GGCC	5 cut(s)	5, 618, 1152, 1323, 1625
BspCNI	CTCAG	6 cut(s)	115, 203, 643, 851, 1482, 1714
BspDI	ATCGAT	1 cut(s)	429
BspLI	GGNNCC	2 cut(s)	6, 1587
BspMAI	CTGCAG	3 cut(s)	559, 682, 1516
BspMI	ACCTGC	4 cut(s)	338, 774, 806, 967
BspT107I	GGYRCC	1 cut(s)	1585
BspTNI	GGTCTC	2 cut(s)	15, 1718
BsrFI	RCCGGY	2 cut(s)	401, 1446
BsrGI	TGTACA	1 cut(s)	1159
BsrI	ACTGG	3 cut(s)	280, 1034, 1429
BssAI	RCCGGY	2 cut(s)	401, 1446
BssECI	CCNNGG	2 cut(s)	1667, 1728
BssMI	GATC	4 cut(s)	642, 1183, 1224, 1454
BssT1I	CCWWGG	1 cut(s)	1667
Bst2UI	CCWGG	3 cut(s)	624, 1385, 1730
Bst4CI	ACNGT	7 cut(s)	80, 103, 797, 932, 1405, 1578, 1697
BstAPI	GCANNNNNTGC	2 cut(s)	968, 1202
BstAUI	TGTACA	1 cut(s)	1159
BstDEI	CTNAG	8 cut(s)	123, 190, 651, 829, 838, 1469, 1722, 1736
BstDSI	CCRYGG	1 cut(s)	1667
BstEII	GGTNACC	1 cut(s)	331
BstF5I	GGATG	5 cut(s)	420, 504, 619, 1888, 1906
BstHHI	GCGC	1 cut(s)	1269
BstKTI	GATC	4 cut(s)	645, 1186, 1227, 1457
BstMAI	GTCTC	4 cut(s)	15, 1134, 1319, 1718
BstMBI	GATC	4 cut(s)	642, 1183, 1224, 1454
BstMCI	CGRYCG	2 cut(s)	82, 1804
BstMWI	GCNNNNNNNGC	4 cut(s)	557, 968, 998, 1202
BstNI	CCWGG	3 cut(s)	624, 1385, 1730
BstPI	GGTNACC	1 cut(s)	331
BstSCI	CCNGG	3 cut(s)	622, 1383, 1728
BstSFI	CTRYAG	3 cut(s)	555, 678, 1512
BstV1I	GCAGC	8 cut(s)	295, 547, 569, 958, 1526, 1580, 1784, 1822
BstV2I	GAAGAC	2 cut(s)	933, 1337
BstX2I	RGATCY	1 cut(s)	1224
BstYI	RGATCY	1 cut(s)	1224
Bsu15I	ATCGAT	1 cut(s)	429
BsuRI	GGCC	5 cut(s)	5, 618, 1152, 1323, 1625
BsuTUI	ATCGAT	1 cut(s)	429
BtgI	CCRYGG	1 cut(s)	1667
BtsCI	GGATG	5 cut(s)	420, 504, 619, 1888, 1906
BtsI	GCAGTG	3 cut(s)	396, 509, 1963
BtsIMutI	CAGTG	8 cut(s)	99, 396, 509, 648, 802, 1041, 1422, 1963
BveI	ACCTGC	4 cut(s)	338, 774, 806, 967
CaiI	CAGNNNCTG	1 cut(s)	1004
CfoI	GCGC	1 cut(s)	1269
Cfr10I	RCCGGY	2 cut(s)	401, 1446
Cfr13I	GGNCC	5 cut(s)	4, 514, 1322, 1444, 1873
ClaI	ATCGAT	1 cut(s)	429
CseI	GACGC	1 cut(s)	1604
Csp6I	GTAC	6 cut(s)	664, 1074, 1160, 1574, 1586, 1661
CspAI	ACCGGT	1 cut(s)	1446
CviAII	CATG	8 cut(s)	208, 344, 1238, 1256, 1438, 1668, 1708, 1868
CviQI	GTAC	6 cut(s)	664, 1074, 1160, 1574, 1586, 1661
DdeI	CTNAG	8 cut(s)	123, 190, 651, 829, 838, 1469, 1722, 1736
DpnI	GATC	4 cut(s)	644, 1185, 1226, 1456
DpnII	GATC	4 cut(s)	642, 1183, 1224, 1454
DriI	GACNNNNNGTC	1 cut(s)	934
EaeI	YGGCCR	2 cut(s)	616, 1623
Eam1105I	GACNNNNNGTC	1 cut(s)	934
Eco130I	CCWWGG	1 cut(s)	1667
Eco31I	GGTCTC	2 cut(s)	15, 1718
Eco32I	GATATC	1 cut(s)	1353
Eco47I	GGWCC	3 cut(s)	514, 1444, 1873
Eco57I	CTGAAG	3 cut(s)	900, 945, 1909
Eco91I	GGTNACC	1 cut(s)	331
EcoO65I	GGTNACC	1 cut(s)	331
EcoRII	CCWGG	3 cut(s)	622, 1383, 1728
EcoRV	GATATC	1 cut(s)	1353
EcoT14I	CCWWGG	1 cut(s)	1667
ErhI	CCWWGG	1 cut(s)	1667
FaeI	CATG	8 cut(s)	211, 347, 1241, 1259, 1441, 1671, 1711, 1871
FalI	AAGNNNNNCTT	2 cut(s)	370, 402
FaqI	GGGAC	1 cut(s)	110
FatI	CATG	8 cut(s)	207, 343, 1237, 1255, 1437, 1667, 1707, 1867
Fnu4HI	GCNGC	8 cut(s)	309, 558, 561, 972, 1515, 1569, 1773, 1811
FokI	GGATG	5 cut(s)	427, 511, 606, 1895, 1913
Fsp4HI	GCNGC	8 cut(s)	309, 558, 561, 972, 1515, 1569, 1773, 1811
FspBI	CTAG	4 cut(s)	548, 1590, 1644, 1764
GlaI	GCGC	1 cut(s)	1268
GluI	GCNGC	8 cut(s)	309, 558, 561, 972, 1515, 1569, 1773, 1811
GsuI	CTGGAG	2 cut(s)	645, 1446
HaeIII	GGCC	5 cut(s)	5, 618, 1152, 1323, 1625
HapII	CCGG	5 cut(s)	72, 402, 615, 1447, 1800
HgaI	GACGC	1 cut(s)	1604
HhaI	GCGC	1 cut(s)	1269
Hin1II	CATG	8 cut(s)	211, 347, 1241, 1259, 1441, 1671, 1711, 1871
Hin6I	GCGC	1 cut(s)	1267
HinP1I	GCGC	1 cut(s)	1267
HindIII	AAGCTT	2 cut(s)	245, 465
HinfI	GANTC	7 cut(s)	84, 431, 1123, 1216, 1232, 1312, 1943
HpaII	CCGG	5 cut(s)	72, 402, 615, 1447, 1800
HphI	GGTGA	4 cut(s)	296, 698, 821, 948
Hpy166II	GTNNAC	3 cut(s)	129, 219, 956
Hpy188III	TCNNGA	6 cut(s)	28, 88, 299, 1026, 1756, 1764
Hpy8I	GTNNAC	3 cut(s)	129, 219, 956
Hpy99I	CGWCG	2 cut(s)	49, 80
HpyAV	CCTTC	2 cut(s)	100, 1873
HpyCH4III	ACNGT	7 cut(s)	80, 103, 797, 932, 1405, 1578, 1697
HpyF10VI	GCNNNNNNNGC	4 cut(s)	557, 968, 998, 1202
HpyF3I	CTNAG	8 cut(s)	123, 190, 651, 829, 838, 1469, 1722, 1736
Hsp92II	CATG	8 cut(s)	211, 347, 1241, 1259, 1441, 1671, 1711, 1871
HspAI	GCGC	1 cut(s)	1267
KpnI	GGTACC	1 cut(s)	1589
Kzo9I	GATC	4 cut(s)	642, 1183, 1224, 1454
LmnI	GCTCC	4 cut(s)	626, 757, 1100, 1427
Lsp1109I	GCAGC	8 cut(s)	295, 547, 569, 958, 1526, 1580, 1784, 1822
LweI	GCATC	4 cut(s)	193, 489, 802, 1192
MaeI	CTAG	4 cut(s)	548, 1590, 1644, 1764
MaeIII	GTNAC	4 cut(s)	331, 1592, 1753, 1958
MalI	GATC	4 cut(s)	644, 1185, 1226, 1456
MboI	GATC	4 cut(s)	642, 1183, 1224, 1454
MflI	RGATCY	1 cut(s)	1224
MhlI	GDGCHC	2 cut(s)	257, 762
MlsI	TGGCCA	1 cut(s)	1625
MluNI	TGGCCA	1 cut(s)	1625
MlyI	GAGTC	3 cut(s)	1132, 1321, 1937
MmeI	TCCRAC	1 cut(s)	30
Mox20I	TGGCCA	1 cut(s)	1625
MroXI	GAANNNNTTC	2 cut(s)	215, 382
MscI	TGGCCA	1 cut(s)	1625
MseI	TTAA	2 cut(s)	39, 1521
MslI	CAYNNNNRTG	1 cut(s)	206
Msp20I	TGGCCA	1 cut(s)	1625
MspA1I	CMGCKG	2 cut(s)	560, 1571
MspI	CCGG	5 cut(s)	72, 402, 615, 1447, 1800
MspR9I	CCNGG	3 cut(s)	624, 1385, 1730
Mva1269I	GAATGC	3 cut(s)	880, 898, 1066
MvaI	CCWGG	3 cut(s)	624, 1385, 1730
MwoI	GCNNNNNNNGC	4 cut(s)	557, 968, 998, 1202
NcoI	CCATGG	1 cut(s)	1667
NdeII	GATC	4 cut(s)	642, 1183, 1224, 1454
NlaIII	CATG	8 cut(s)	211, 347, 1241, 1259, 1441, 1671, 1711, 1871
NlaIV	GGNNCC	2 cut(s)	6, 1587
NmuCI	GTSAC	3 cut(s)	1592, 1753, 1958
PaqCI	CACCTGC	2 cut(s)	774, 967
PctI	GAATGC	3 cut(s)	880, 898, 1066
PdmI	GAANNNNTTC	2 cut(s)	215, 382
PfeI	GAWTC	4 cut(s)	84, 431, 1216, 1232
PfoI	TCCNGGA	1 cut(s)	622
PinAI	ACCGGT	1 cut(s)	1446
PkrI	GCNGC	8 cut(s)	310, 559, 562, 973, 1516, 1570, 1774, 1812
PleI	GAGTC	3 cut(s)	1131, 1320, 1937
PpsI	GAGTC	3 cut(s)	1131, 1320, 1937
Psp6I	CCWGG	3 cut(s)	622, 1383, 1728
PspEI	GGTNACC	1 cut(s)	331
PspGI	CCWGG	3 cut(s)	622, 1383, 1728
PspN4I	GGNNCC	2 cut(s)	6, 1587
PspPI	GGNCC	5 cut(s)	4, 514, 1322, 1444, 1873
PstI	CTGCAG	3 cut(s)	559, 682, 1516
PstNI	CAGNNNCTG	1 cut(s)	1004
PsuI	RGATCY	1 cut(s)	1224
PvuII	CAGCTG	2 cut(s)	560, 1571
RsaI	GTAC	6 cut(s)	665, 1075, 1161, 1575, 1587, 1662
RsaNI	GTAC	6 cut(s)	664, 1074, 1160, 1574, 1586, 1661
RseI	CAYNNNNRTG	1 cut(s)	206
SaqAI	TTAA	2 cut(s)	39, 1521
SatI	GCNGC	8 cut(s)	309, 558, 561, 972, 1515, 1569, 1773, 1811
Sau3AI	GATC	4 cut(s)	642, 1183, 1224, 1454
Sau96I	GGNCC	5 cut(s)	4, 514, 1322, 1444, 1873
SchI	GAGTC	3 cut(s)	1132, 1321, 1937
ScrFI	CCNGG	3 cut(s)	624, 1385, 1730
SduI	GDGCHC	2 cut(s)	257, 762
SfaNI	GCATC	4 cut(s)	193, 489, 802, 1192
SfcI	CTRYAG	3 cut(s)	555, 678, 1512
SinI	GGWCC	3 cut(s)	514, 1444, 1873
SmiMI	CAYNNNNRTG	1 cut(s)	206
SsiI	CCGC	1 cut(s)	1647
SspI	AATATT	1 cut(s)	966
SspMI	CTAG	4 cut(s)	548, 1590, 1644, 1764
StyD4I	CCNGG	3 cut(s)	622, 1383, 1728
StyI	CCWWGG	1 cut(s)	1667
TaaI	ACNGT	7 cut(s)	80, 103, 797, 932, 1405, 1578, 1697
TaqI	TCGA	4 cut(s)	82, 320, 429, 470
TatI	WGTACW	4 cut(s)	663, 1159, 1573, 1660
TfiI	GAWTC	4 cut(s)	84, 431, 1216, 1232
Tru1I	TTAA	2 cut(s)	39, 1521
Tru9I	TTAA	2 cut(s)	39, 1521
TscAI	CASTG	8 cut(s)	106, 403, 509, 655, 802, 1041, 1429, 1963
TseFI	GTSAC	3 cut(s)	1592, 1753, 1958
TseI	GCWGC	8 cut(s)	308, 557, 560, 971, 1514, 1568, 1772, 1810
Tsp45I	GTSAC	3 cut(s)	1592, 1753, 1958
TspDTI	ATGAA	8 cut(s)	224, 537, 584, 1254, 1272, 1899, 1917, 1929
TspGWI	ACGGA	3 cut(s)	33, 506, 904
TspRI	CASTG	8 cut(s)	106, 403, 509, 655, 802, 1041, 1429, 1963
VpaK11BI	GGWCC	3 cut(s)	514, 1444, 1873
XapI	RAATTY	6 cut(s)	580, 909, 1409, 1507, 1857, 1917
XbaI	TCTAGA	1 cut(s)	1763
XmnI	GAANNNNTTC	2 cut(s)	215, 382
XspI	CTAG	4 cut(s)	548, 1590, 1644, 1764

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.