Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr4

Orthogroup ID

OG0006682

Physical Location & Seq

Genomic Coordinates Forward (+)

46150380 .. 46155159

Gene Structure 4780 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw4G021460.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1851 bp

ATGGCCCCGTCAAACATCAGAGACCTCTTGACGGCGTTTAATCCGTCGCTGGACTTGTTCGCCATTACTTCCGGCGACGGTCGAATCAAGATTTGGGACACTGTGAAGGGTCAAGTCCAGACTGAGTTTACAGACATAGTATCAGAGGAAGATACAAGCATATTTGCCAAAAGAGAAAGAGGGCATCTCTCTGTTGATTACACTTGCATGAAATGGTTCACTTCTGAAAGAAAGAAGAAAAGGAAGCTTGGGTGCTCGTTGTTGGTTTTGGGAACTGGTGGTGGTGATGTATTGGCTCTTGATGTGGCTGCTGGTCAATCGAAATGGAGAGTTACCGATTGCCATGCAGGTCGTGTTAGTGCAATATCGTTTGCAAGAAGTGGTTCTTCTATTTACACTGCCGGTGCTGATGGGATGATTTGCGAAATCGATTCACTTGCAGGAAACCTGTTGGGGAAGTTCAAAGCTTCGACAAAGGCAATCTCCTCTATGTCTGTTTCAGCAGATGGGAAGATAATAGCTACTGCAGCTGCACAAATGAAGATATTGAATTTGTCTGACCACAAAAAGATACAGAAGTTTTCCGGCCATCCTGGAGCTGTTCGCTGTATGATCTTCACTGAGAATGGGAAGTACATTCTCTCATCTGCAGTTGGTGAAAGGTATATTGCAGTATGGAATATAGATGGTGGGAAAAAGCAGTCAGCAAGTGCTGTTCTCGCAATGGAGCACCCTGCTGTGTTCCTTGATAGCAGGTGCATAGACGGTGGGGAAGTTGGTGATGCAGGTCTATATGTCTTAGCAATCTCAGAAGTTGGCGTTTGTTATTTTTGGTTTGGAAAGAATGCTGAAGAATTACGGAATGCCAAGCCTACAAAAATTTCAGGTTCACCTGCAATATTTGCTGCAATTTTCCAAGGAATTGCCAAATCAGCTTCTGGGCAGATATTTGTTGCTTCTGGATTACCAGTGAAGCCATCATTTCAAAAACTTTTGGTGCATTCTGGTACTGACATAAAGTTGAGTAGCTCCCGTGATGGGGTTCTTCTACCAATTAGTCAGTCTCTTGTCAAATCCAAGAGAGGCCAAGATGTACAAAATAGAGTTGTTGCATTAGATTGTGCAAATGCAGAAGATGCCCTACTTCCGATTCCAAAGATCTTTGATTCGCATGAAAAAAAGAAAAAGCATGAAAAATTGCGCTTTGACAAAGACGAAGTAATGGCCGATTTGGAGGACAGCAGGAGTCTCTCTGGCCCTGTGAAGACCAAAGATGGCACGGTAGAATTTGAACTTGACACTGGAGCAATTTGCATGGAGGACCGGTTGAGATCATTAGGAATACTCAGTAAACTAGATGACCAAACAATCAAATCCACACTAAATTCTGCAGCATTTAAGAGTATTGACATTCAGACAAATATGCCACAAAAGAAGATGAGGGCAGCTGTACTGTCAATGGTACCTAGTGACACATACAAGTTATTGGGAGTTTTGGTGGCCATTTGGCAAACAAGGTCTAGCAGTGGAAATTATGTACTTCCATGGATATACAGCATATTGGTAAATCACAGTCATTATGTCATGTCAGAAGAACCTGAGACCCAGGTGCTTAGTTCCTTGTTCAAGGTCACCAAATCTAGAAAGGCAGCTATTCAGCCTTTATTACAATTATCCGGTCGTTTGCAGCTTGTAGTGGCACAGATTGACAAGGCAACAAACACCGGAAATCAAATTTTATTGCATGAGGACCAGAAGGATGAAAGTGAAGATGAGGATGAAGATGTAAATGAAATTCACTTCAGGGAAGAAGATGATGACTCTGAAATAAGCAGTGACGATGACCAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001650 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005730 GO:0006139 GO:0006355 GO:0006356 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016070 GO:0016072 GO:0019219 GO:0019222 GO:0022613 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044087 GO:0044089 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0045893 GO:0045935 GO:0045943 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0080090 GO:0090069 GO:0090070 GO:0090304 GO:1901360 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2000232 GO:2000234 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

Utp12 WD40

Protein Analysis

616

Amino Acids

67.14

Weight (kDa)

6.12

Isoelectric Point (pI)

39.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WD40_CDC20-Fz	PF24807	85 - 234	2.8e-12	CDC20/Fizzy WD40 domain
Beta-prop_THOC3	PF25174	86 - 182	3.8e-08	THOC3 beta-propeller domain
WDR55	PF24796	87 - 238	1.8e-10	WDR55
Beta-prop_WDR36-Utp21_2nd	PF25168	89 - 231	7.1e-07	WDR36/Utp21 second beta-propeller domain
Beta-prop_WDR3_1st	PF25173	96 - 230	5.5e-11	WDR3 first beta-propeller domain
WD40_Prp19	PF24814	106 - 228	6.3e-15	Prp19 WD40 domain
Beta-prop_WDR5	PF25175	114 - 232	1.4e-13	WDR5 beta-propeller domain
Beta-prop_EML_2	PF23414	116 - 238	5.8e-10	Echinoderm microtubule-associated protein second beta-propeller
WD40_WDHD1_1st	PF24817	121 - 239	1.1e-09	WDHD1 first WD40 domain
WD40_MABP1-WDR62_1st	PF24780	127 - 237	1.8e-07	MABP1/WDR62 first WD40 domain
Utp12	PF04003	474 - 565	4e-09	Dip2/Utp12 Family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0006682)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G11240
fragaria_vesca	FvH4_6g31810 FvH4_6g31810 FvH4_6g31810 FvH4_6g31810 FvH4_6g31810 FvH4_6g31810 FvH4_6g31810 FvH4_6g31810
malus_domestica	MD13G1161900.v1.1 MD16G1161700.v1.1
prunus_persica	Prupe.1G129200_v2.0.a1
pyrus_communis	pycom13g13800
rosa_chinensis	RchiOBHm_Chr4g0423831
rosa_laevigata	RLG00000007528
rosa_multiflora	Rmu_sc0003369.1_g000013 Rmu_sc0041036.1_g000001
rosa_roxburghii	Rroxscaffold_5G00365950
rosa_rugosa	Rorug04G0191100 Rorug04G0191200 Rorug04G0191200
rosa_samantha	Rh4AG250500 Rh4BG255800 Rh4CG264000 Rh4DG250300
rosa_wichuraiana	Rw4G021460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	744, 901
Acc36I	ACCTGC	4 cut(s)	338, 744, 776, 901
Acc65I	GGTACC	1 cut(s)	1462
AccB1I	GGYRCC	1 cut(s)	1462
AcoI	YGGCCR	3 cut(s)	586, 1224, 1500
AcsI	RAATTY	6 cut(s)	550, 879, 1286, 1384, 1734, 1794
AcuI	CTGAAG	2 cut(s)	870, 1786
AfaI	GTAC	6 cut(s)	635, 1009, 1095, 1452, 1464, 1539
AfiI	CCNNNNNNNGG	3 cut(s)	31, 1038, 1039
AgeI	ACCGGT	1 cut(s)	1323
AgsI	TTSAA	5 cut(s)	463, 550, 986, 1292, 1627
AjnI	CCWGG	2 cut(s)	592, 1605
AjuI	GAANNNNNNNTTGG	2 cut(s)	76, 108
Alw21I	GWGCWC	2 cut(s)	257, 732
Alw26I	GTCTC	4 cut(s)	15, 1068, 1253, 1595
AlwNI	CAGNNNCTG	1 cut(s)	938
AoxI	GGCC	6 cut(s)	3, 586, 1084, 1224, 1255, 1500
ApeKI	GCWGC	8 cut(s)	308, 527, 530, 905, 1391, 1445, 1649, 1687
ApoI	RAATTY	6 cut(s)	550, 879, 1286, 1384, 1734, 1794
AsiGI	ACCGGT	1 cut(s)	1323
Asp700I	GAANNNNTTC	2 cut(s)	215, 382
Asp718I	GGTACC	1 cut(s)	1462
AspLEI	GCGC	1 cut(s)	1203
AspS9I	GGNCC	4 cut(s)	4, 1256, 1321, 1750
AsuHPI	GGTGA	5 cut(s)	296, 668, 791, 882, 1624
AvaII	GGWCC	2 cut(s)	1321, 1750
BaeI	ACNNNNGTAYC	2 cut(s)	563, 596
BalI	TGGCCA	1 cut(s)	1502
BanI	GGYRCC	1 cut(s)	1462
BarI	GAAGNNNNNNTAC	2 cut(s)	1125, 1157
BbsI	GAAGAC	1 cut(s)	1271
Bbv12I	GWGCWC	2 cut(s)	257, 732
BbvI	GCAGC	8 cut(s)	295, 517, 539, 892, 1403, 1457, 1661, 1699
BccI	CCATC	7 cut(s)	404, 500, 597, 680, 985, 1031, 1268
BceAI	ACGGC	1 cut(s)	48
BcgI	CGANNNNNNTGC	4 cut(s)	326, 360, 419, 453
BciT130I	CCWGG	2 cut(s)	594, 1607
BcoDI	GTCTC	4 cut(s)	15, 1068, 1253, 1595
BfaI	CTAG	4 cut(s)	1355, 1467, 1521, 1641
BfmI	CTRYAG	3 cut(s)	525, 648, 1389
BfuAI	ACCTGC	4 cut(s)	338, 744, 776, 901
BglII	AGATCT	1 cut(s)	1158
BisI	GCNGC	8 cut(s)	309, 528, 531, 906, 1392, 1446, 1650, 1688
BlsI	GCNGC	8 cut(s)	310, 529, 532, 907, 1393, 1447, 1651, 1689
Bme1390I	CCNGG	2 cut(s)	594, 1607
Bme18I	GGWCC	2 cut(s)	1321, 1750
BmgT120I	GGNCC	4 cut(s)	4, 1256, 1321, 1750
BmiI	GGNNCC	2 cut(s)	6, 1464
BmrFI	CCNGG	2 cut(s)	594, 1607
BmsI	GCATC	3 cut(s)	193, 772, 1126
BpiI	GAAGAC	1 cut(s)	1271
BplI	GAGNNNNNCTC	2 cut(s)	171, 203
BpmI	CTGGAG	2 cut(s)	615, 1323
Bsa29I	ATCGAT	1 cut(s)	429
BsaI	GGTCTC	2 cut(s)	15, 1595
BsaJI	CCNNGG	3 cut(s)	916, 1544, 1605
BsaWI	WCCGGW	3 cut(s)	1323, 1676, 1724
BsaXI	ACNNNNNCTCC	4 cut(s)	1310, 1340, 1482, 1512
Bsc4I	CCNNNNNNNGG	3 cut(s)	31, 1038, 1039
Bse118I	RCCGGY	2 cut(s)	401, 1323
Bse1I	ACTGG	4 cut(s)	280, 968, 1306, 1846
Bse3DI	GCAATG	1 cut(s)	729
BseBI	CCWGG	2 cut(s)	594, 1607
BseCI	ATCGAT	1 cut(s)	429
BseDI	CCNNGG	3 cut(s)	916, 1544, 1605
BseGI	GGATG	4 cut(s)	420, 589, 1765, 1783
BseLI	CCNNNNNNNGG	3 cut(s)	31, 1038, 1039
BseMI	GCAATG	1 cut(s)	729
BseMII	CTCAG	5 cut(s)	114, 612, 822, 1360, 1590
BseNI	ACTGG	4 cut(s)	280, 968, 1306, 1846
BseRI	GAGGAG	1 cut(s)	475
BseXI	GCAGC	8 cut(s)	295, 517, 539, 892, 1403, 1457, 1661, 1699
BsgI	GTGCAG	1 cut(s)	516
Bsh1285I	CGRYCG	2 cut(s)	82, 1681
BshFI	GGCC	6 cut(s)	5, 588, 1086, 1226, 1257, 1502
BshNI	GGYRCC	1 cut(s)	1462
BshTI	ACCGGT	1 cut(s)	1323
BshVI	ATCGAT	1 cut(s)	429
BsiEI	CGRYCG	2 cut(s)	82, 1681
BsiHKAI	GWGCWC	2 cut(s)	257, 732
BsiSI	CCGG	6 cut(s)	72, 402, 585, 1324, 1677, 1725
BslFI	GGGAC	1 cut(s)	110
BslI	CCNNNNNNNGG	3 cut(s)	31, 1038, 1039
BsmAI	GTCTC	4 cut(s)	15, 1068, 1253, 1595
BsmFI	GGGAC	1 cut(s)	110
BsmI	GAATGC	3 cut(s)	850, 868, 1000
BsnI	GGCC	6 cut(s)	5, 588, 1086, 1226, 1257, 1502
Bso31I	GGTCTC	2 cut(s)	15, 1595
Bsp1286I	GDGCHC	2 cut(s)	257, 732
Bsp1407I	TGTACA	1 cut(s)	1093
Bsp143I	GATC	3 cut(s)	612, 1158, 1331
Bsp19I	CCATGG	1 cut(s)	1544
BspANI	GGCC	6 cut(s)	5, 588, 1086, 1226, 1257, 1502
BspCNI	CTCAG	5 cut(s)	115, 613, 821, 1359, 1591
BspDI	ATCGAT	1 cut(s)	429
BspLI	GGNNCC	2 cut(s)	6, 1464
BspMAI	CTGCAG	3 cut(s)	529, 652, 1393
BspMI	ACCTGC	4 cut(s)	338, 744, 776, 901
BspT107I	GGYRCC	1 cut(s)	1462
BspTNI	GGTCTC	2 cut(s)	15, 1595
BsrDI	GCAATG	1 cut(s)	729
BsrFI	RCCGGY	2 cut(s)	401, 1323
BsrGI	TGTACA	1 cut(s)	1093
BsrI	ACTGG	4 cut(s)	280, 968, 1306, 1846
BssAI	RCCGGY	2 cut(s)	401, 1323
BssECI	CCNNGG	3 cut(s)	916, 1544, 1605
BssMI	GATC	3 cut(s)	612, 1158, 1331
BssT1I	CCWWGG	2 cut(s)	916, 1544
Bst2UI	CCWGG	2 cut(s)	594, 1607
Bst4CI	ACNGT	6 cut(s)	80, 103, 767, 1282, 1455, 1574
BstAPI	GCANNNNNTGC	2 cut(s)	902, 1136
BstAUI	TGTACA	1 cut(s)	1093
BstDEI	CTNAG	7 cut(s)	123, 621, 799, 808, 1346, 1599, 1613
BstDSI	CCRYGG	1 cut(s)	1544
BstEII	GGTNACC	1 cut(s)	1630
BstF5I	GGATG	4 cut(s)	420, 589, 1765, 1783
BstHHI	GCGC	1 cut(s)	1203
BstKTI	GATC	3 cut(s)	615, 1161, 1334
BstMAI	GTCTC	4 cut(s)	15, 1068, 1253, 1595
BstMBI	GATC	3 cut(s)	612, 1158, 1331
BstMCI	CGRYCG	2 cut(s)	82, 1681
BstMWI	GCNNNNNNNGC	5 cut(s)	527, 719, 902, 932, 1136
BstNI	CCWGG	2 cut(s)	594, 1607
BstPI	GGTNACC	1 cut(s)	1630
BstSCI	CCNGG	2 cut(s)	592, 1605
BstSFI	CTRYAG	3 cut(s)	525, 648, 1389
BstV1I	GCAGC	8 cut(s)	295, 517, 539, 892, 1403, 1457, 1661, 1699
BstV2I	GAAGAC	1 cut(s)	1271
BstX2I	RGATCY	1 cut(s)	1158
BstYI	RGATCY	1 cut(s)	1158
Bsu15I	ATCGAT	1 cut(s)	429
BsuRI	GGCC	6 cut(s)	5, 588, 1086, 1226, 1257, 1502
BsuTUI	ATCGAT	1 cut(s)	429
BtgI	CCRYGG	1 cut(s)	1544
BtsCI	GGATG	4 cut(s)	420, 589, 1765, 1783
BtsI	GCAGTG	3 cut(s)	396, 1531, 1840
BtsIMutI	CAGTG	7 cut(s)	99, 396, 618, 975, 1299, 1531, 1840
BveI	ACCTGC	4 cut(s)	338, 744, 776, 901
CaiI	CAGNNNCTG	1 cut(s)	938
CfoI	GCGC	1 cut(s)	1203
Cfr10I	RCCGGY	2 cut(s)	401, 1323
Cfr13I	GGNCC	4 cut(s)	4, 1256, 1321, 1750
ClaI	ATCGAT	1 cut(s)	429
Csp6I	GTAC	6 cut(s)	634, 1008, 1094, 1451, 1463, 1538
CspAI	ACCGGT	1 cut(s)	1323
CviAII	CATG	8 cut(s)	208, 344, 1172, 1190, 1315, 1545, 1585, 1745
CviQI	GTAC	6 cut(s)	634, 1008, 1094, 1451, 1463, 1538
DdeI	CTNAG	7 cut(s)	123, 621, 799, 808, 1346, 1599, 1613
DpnI	GATC	3 cut(s)	614, 1160, 1333
DpnII	GATC	3 cut(s)	612, 1158, 1331
EaeI	YGGCCR	3 cut(s)	586, 1224, 1500
Eco130I	CCWWGG	2 cut(s)	916, 1544
Eco31I	GGTCTC	2 cut(s)	15, 1595
Eco47I	GGWCC	2 cut(s)	1321, 1750
Eco57I	CTGAAG	2 cut(s)	870, 1786
Eco91I	GGTNACC	1 cut(s)	1630
EcoO65I	GGTNACC	1 cut(s)	1630
EcoRII	CCWGG	2 cut(s)	592, 1605
EcoT14I	CCWWGG	2 cut(s)	916, 1544
ErhI	CCWWGG	2 cut(s)	916, 1544
FaeI	CATG	8 cut(s)	211, 347, 1175, 1193, 1318, 1548, 1588, 1748
FalI	AAGNNNNNCTT	2 cut(s)	370, 402
FaqI	GGGAC	1 cut(s)	110
FatI	CATG	8 cut(s)	207, 343, 1171, 1189, 1314, 1544, 1584, 1744
Fnu4HI	GCNGC	8 cut(s)	309, 528, 531, 906, 1392, 1446, 1650, 1688
FokI	GGATG	4 cut(s)	427, 576, 1772, 1790
Fsp4HI	GCNGC	8 cut(s)	309, 528, 531, 906, 1392, 1446, 1650, 1688
FspBI	CTAG	4 cut(s)	1355, 1467, 1521, 1641
GlaI	GCGC	1 cut(s)	1202
GluI	GCNGC	8 cut(s)	309, 528, 531, 906, 1392, 1446, 1650, 1688
GsuI	CTGGAG	2 cut(s)	615, 1323
HaeIII	GGCC	6 cut(s)	5, 588, 1086, 1226, 1257, 1502
HapII	CCGG	6 cut(s)	72, 402, 585, 1324, 1677, 1725
HhaI	GCGC	1 cut(s)	1203
Hin1II	CATG	8 cut(s)	211, 347, 1175, 1193, 1318, 1548, 1588, 1748
Hin6I	GCGC	1 cut(s)	1201
HinP1I	GCGC	1 cut(s)	1201
HindIII	AAGCTT	2 cut(s)	245, 465
HinfI	GANTC	6 cut(s)	84, 431, 1150, 1166, 1246, 1820
HpaII	CCGG	6 cut(s)	72, 402, 585, 1324, 1677, 1725
HphI	GGTGA	5 cut(s)	296, 668, 791, 882, 1624
Hpy166II	GTNNAC	4 cut(s)	129, 219, 890, 1352
Hpy188I	TCNGA	9 cut(s)	20, 145, 226, 559, 811, 1149, 1416, 1591, 1825
Hpy188III	TCNNGA	6 cut(s)	28, 88, 118, 299, 960, 1641
Hpy8I	GTNNAC	4 cut(s)	129, 219, 890, 1352
Hpy99I	CGWCG	2 cut(s)	49, 80
HpyAV	CCTTC	2 cut(s)	100, 1750
HpyCH4III	ACNGT	6 cut(s)	80, 103, 767, 1282, 1455, 1574
HpyF10VI	GCNNNNNNNGC	5 cut(s)	527, 719, 902, 932, 1136
HpyF3I	CTNAG	7 cut(s)	123, 621, 799, 808, 1346, 1599, 1613
Hsp92II	CATG	8 cut(s)	211, 347, 1175, 1193, 1318, 1548, 1588, 1748
HspAI	GCGC	1 cut(s)	1201
KpnI	GGTACC	1 cut(s)	1466
Kzo9I	GATC	3 cut(s)	612, 1158, 1331
LmnI	GCTCC	4 cut(s)	596, 727, 1034, 1304
Lsp1109I	GCAGC	8 cut(s)	295, 517, 539, 892, 1403, 1457, 1661, 1699
LweI	GCATC	3 cut(s)	193, 772, 1126
MaeI	CTAG	4 cut(s)	1355, 1467, 1521, 1641
MaeIII	GTNAC	4 cut(s)	331, 1469, 1630, 1835
MalI	GATC	3 cut(s)	614, 1160, 1333
MboI	GATC	3 cut(s)	612, 1158, 1331
MflI	RGATCY	1 cut(s)	1158
MhlI	GDGCHC	2 cut(s)	257, 732
MlsI	TGGCCA	1 cut(s)	1502
MluNI	TGGCCA	1 cut(s)	1502
MlyI	GAGTC	2 cut(s)	1255, 1814
Mox20I	TGGCCA	1 cut(s)	1502
MroXI	GAANNNNTTC	2 cut(s)	215, 382
MscI	TGGCCA	1 cut(s)	1502
MseI	TTAA	2 cut(s)	39, 1398
MslI	CAYNNNNRTG	1 cut(s)	206
Msp20I	TGGCCA	1 cut(s)	1502
MspA1I	CMGCKG	2 cut(s)	530, 1448
MspI	CCGG	6 cut(s)	72, 402, 585, 1324, 1677, 1725
MspR9I	CCNGG	2 cut(s)	594, 1607
Mva1269I	GAATGC	3 cut(s)	850, 868, 1000
MvaI	CCWGG	2 cut(s)	594, 1607
MwoI	GCNNNNNNNGC	5 cut(s)	527, 719, 902, 932, 1136
NcoI	CCATGG	1 cut(s)	1544
NdeII	GATC	3 cut(s)	612, 1158, 1331
NlaIII	CATG	8 cut(s)	211, 347, 1175, 1193, 1318, 1548, 1588, 1748
NlaIV	GGNNCC	2 cut(s)	6, 1464
NmuCI	GTSAC	3 cut(s)	1469, 1630, 1835
PaqCI	CACCTGC	2 cut(s)	744, 901
PctI	GAATGC	3 cut(s)	850, 868, 1000
PdmI	GAANNNNTTC	2 cut(s)	215, 382
PfeI	GAWTC	4 cut(s)	84, 431, 1150, 1166
PfoI	TCCNGGA	1 cut(s)	592
PinAI	ACCGGT	1 cut(s)	1323
PkrI	GCNGC	8 cut(s)	310, 529, 532, 907, 1393, 1447, 1651, 1689
PleI	GAGTC	2 cut(s)	1254, 1814
PpsI	GAGTC	2 cut(s)	1254, 1814
Psp6I	CCWGG	2 cut(s)	592, 1605
PspEI	GGTNACC	1 cut(s)	1630
PspGI	CCWGG	2 cut(s)	592, 1605
PspN4I	GGNNCC	2 cut(s)	6, 1464
PspPI	GGNCC	4 cut(s)	4, 1256, 1321, 1750
PstI	CTGCAG	3 cut(s)	529, 652, 1393
PstNI	CAGNNNCTG	1 cut(s)	938
PsuI	RGATCY	1 cut(s)	1158
PvuII	CAGCTG	2 cut(s)	530, 1448
RsaI	GTAC	6 cut(s)	635, 1009, 1095, 1452, 1464, 1539
RsaNI	GTAC	6 cut(s)	634, 1008, 1094, 1451, 1463, 1538
RseI	CAYNNNNRTG	1 cut(s)	206
SaqAI	TTAA	2 cut(s)	39, 1398
SatI	GCNGC	8 cut(s)	309, 528, 531, 906, 1392, 1446, 1650, 1688
Sau3AI	GATC	3 cut(s)	612, 1158, 1331
Sau96I	GGNCC	4 cut(s)	4, 1256, 1321, 1750
SchI	GAGTC	2 cut(s)	1255, 1814
ScrFI	CCNGG	2 cut(s)	594, 1607
SduI	GDGCHC	2 cut(s)	257, 732
SfaNI	GCATC	3 cut(s)	193, 772, 1126
SfcI	CTRYAG	3 cut(s)	525, 648, 1389
SinI	GGWCC	2 cut(s)	1321, 1750
SmiMI	CAYNNNNRTG	1 cut(s)	206
SspI	AATATT	1 cut(s)	900
SspMI	CTAG	4 cut(s)	1355, 1467, 1521, 1641
StyD4I	CCNGG	2 cut(s)	592, 1605
StyI	CCWWGG	2 cut(s)	916, 1544
TaaI	ACNGT	6 cut(s)	80, 103, 767, 1282, 1455, 1574
TaqI	TCGA	4 cut(s)	82, 320, 429, 470
TatI	WGTACW	4 cut(s)	633, 1093, 1450, 1537
TfiI	GAWTC	4 cut(s)	84, 431, 1150, 1166
Tru1I	TTAA	2 cut(s)	39, 1398
Tru9I	TTAA	2 cut(s)	39, 1398
TscAI	CASTG	7 cut(s)	106, 403, 625, 975, 1306, 1531, 1840
TseFI	GTSAC	3 cut(s)	1469, 1630, 1835
TseI	GCWGC	8 cut(s)	308, 527, 530, 905, 1391, 1445, 1649, 1687
Tsp45I	GTSAC	3 cut(s)	1469, 1630, 1835
TspDTI	ATGAA	7 cut(s)	224, 554, 1188, 1206, 1776, 1794, 1806
TspGWI	ACGGA	2 cut(s)	33, 874
TspRI	CASTG	7 cut(s)	106, 403, 625, 975, 1306, 1531, 1840
VpaK11BI	GGWCC	2 cut(s)	1321, 1750
XapI	RAATTY	6 cut(s)	550, 879, 1286, 1384, 1734, 1794
XbaI	TCTAGA	1 cut(s)	1640
XmnI	GAANNNNTTC	2 cut(s)	215, 382
XspI	CTAG	4 cut(s)	1355, 1467, 1521, 1641

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.