FvH4_6g43150

3'-5' exonuclease

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Forward (+)
33453003 .. 33458065
5063 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g43150.t2

Sequence Viewer

Length: 2772 bp
ATGGAGAAGAAAGAAAAGGTGAAGATGATAGTGGTGGCGCTCGCTTCTCTCTCAGCTCTCTCGGTCTTCTTCCTCTTCTGGAGCCGCCGTAAACGCTCCGAAACTCACTGTTATTTACTAGACGACCCGAAGCCGCAGCACGGATTCAAGAGAGTGTTGGCCGACAATTCGTACTCGCCGTTCAAGCATTTAAGCCTTGAAGAATCCAACGGCGCAGATAAGAATCAGAATTCGCATCCGTATGAGGCGGAGGTCACTGCGCTGCTGGAAAGTCCGCCGATTGAGCTTAAATGTGTGACGGAGAATTTGGAACCGATAATGAGGGAGGCGTATGTTTGGGTCGAGACTGAGAGTCAGTTGGAGGAGATGGTTGAGGTTTTGAGTAAAGAGAAGATCTTTGGGGTTGATACTGAGCAGCACAGCTTGAGGTCGTTTTTGGGATTTACTGCTTTGATACAGATTTCGACTGAGAAGGAGGATTATTTGGTGGATACTATTGCTCTACATGACAGTATGAGCGTTTTGCGGCCAGTTTTCGTTGATGCTAGTATTTGCAAGGTGTTCCATGGGGCAGATAGTGATGTTCTCTGGCTGCAAAGGGACTTCCATATATATGTTGTCAATATGTTTGATACTGCAAAGGCTTGTGAAGTGTTGTCAAAACCGCAGAAATCACTGGCTTATTTACTTGAAACTTACTGTGGTGTCGTCACTAACAAGTTGTTTCAGCGTGAAGACTGGAGACAACGCCCTTTGTCTATGGAAATGGTGCAGTATGCTCGAACAGATGCACACTACCTACTTTACATTGCAGGCCGTTTACTTGCTGAGCTGGATATGCTGGATAACGAAAACTCTTGTCCCGATGACAAATTACGTTTTGTTCTTGAGGCTAGTCGGCGTTCAAACATGTCATGTTTGCAACTGTACACTAAAGACATAGAAGCTTCACCTGGAGGCTCTGCTGCTTCATCAATATTTAGCCGTCATTTAAATGGCCAAGAAGGCATTTTGTCAGCATCTTATGAAATCCAGAATGCTGTGCGCCGGTTTTGTGCATGGAGAGATTTGATGGCTCGTGTACACGATGAAAGCTTGAGATATGTAATATCAGATCAGGCTATTGTTGCCCTCGCTGAAAAAGCTCCAACTAGCCCTGTAGACATGTTAACCACCATTGCAGAAGCTGATGATAATGTGGATTTAAGTTTCAATTTTGGTCTCCCATCTCCATCTCCTGTTGTCTGCAGTCATTTGGATGATTTTCATTATATACTCCAGAACAAAATAGGCAATCCTGATGATCTCTTACCCATGATTCTTCAGAACTGCCTGGGTCAAAAAGGGAGTTGCCCACTGTCTGTCTTCAACTATGCTTTACTGGTTAATTATAATATGAAAGTGACACAGGTTTCTAAACAGAATGGGGTCAGAAATCCAAAGCAAGCCGGTCGAATGGCTTCTCGAAAGCTATTTGTTCAAAAATTTTCCTGCAAATCCCCAGTTTATCATAATTGCCGAATCTATGCAAATGATGGGCGTTTGCTTTGTTACTGTGACCGCAGGAAGCTTGAATGGTATCTTCGTCGGAATTTGGCAAAACTTGTTGAAGAAAATCCACCTGCAATTATGCTTCTGTTTGAGCCCAAAGGGCGTCCAGAAGATGAAGGCAATGATTTTTATATTCAAAGTAAGAAAAATATATGTGTTGGCTGTGGTGAAAGAAACCATTACTTACGGTACCGAATTATTCCCTCGTGCTACAGAATGCATTTCCCTGAACATTTGAAAAGCCACCGTTCTCATGATATCGTTCTATTATGCGTGGACTGTCACGAAATTGCTCATGCCGCTGCAGAGAAGTATAAAGGAAAGATTGCTGCAGAATTTGGGATTCCACTTTTTGTTCGTAAAGTGGTTGATTCGCAACATGCTCAATCTTTATCTGGGGTATCTGTGCCTGTTACAAATGCTGAGGATGCAGGTGTATCTCCTTTACAGTTGCGGACCGCTGCTATGGCTCTTTTGCGCCATGGACCAACAATGCCATCCAAACGCCGTGAGGAACTGACAGAGATTGTTATGACATTTTATGGAGGGAGACAAATTTCTGAGGAAGATTTAGAAAAGGCTTTGCTTGTTGGGATGACTCCTCATGAGAAAAGACGACTTCAGAAGAAGAAAGGGTTTTCTTTTCAACATTCTAAAGGAAGTATTTCTTCAGATGCTGAGGAGAAAAATAGTGTTAGCATTTCAACACCTGCCACTCCGTATGCTCCAGAAGTTTATACTGTACATGAATCTTGCACCAATGAAGATGACATATCGACGATGAACCAAGATGAAGATGTTTTCACAGTGAAGGATGCTGATTTAGGCACCTCCTCTTTAGATCTGAGGATCGATGAAAAAGCTTCTCCCGGCAATGAGAGGAACATAAATTCAGAGATAGCGAGAGATGGTATTTATTATGATGATAAAAGTACACCAAATGGATCAGTAGACTTTCGATCTACTTCCAAACGTAAACATAAATCAAAACACTCTCTCTTAGGTCACGGTCCACATGGTAAGCAAGTTGTGGATCGTCTGTTAAAGGAATCTGGCGAAGATGGTATTAGTCAGTTTTGTCAAAGGTGGAGACAAGTATTTGTTGAAACTGTTCATCCTCGTTTTTTACCTTCCGGCTGGGATGTTACACACAGTGGTAGGAGGGATTTTGGAGAATTCAGCGTCTACAAACCTACCAAGAAAGCATCTACTGCTACTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000175 GO:0000178 GO:0000460 GO:0000785 GO:0000956 GO:0003674 GO:0003824 GO:0004518 GO:0004527 GO:0004532 GO:0004540 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005730 GO:0005737 GO:0005829 GO:0006139 GO:0006364 GO:0006396 GO:0006401 GO:0006402 GO:0006403 GO:0006725 GO:0006807 GO:0007549 GO:0008150 GO:0008152 GO:0008298 GO:0008334 GO:0008408 GO:0009048 GO:0009056 GO:0009057 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0010639 GO:0016070 GO:0016071 GO:0016072 GO:0016075 GO:0016787 GO:0016788 GO:0016796 GO:0016896 GO:0019219 GO:0019222 GO:0019439 GO:0022613 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031974 GO:0031981 GO:0032204 GO:0032205 GO:0032210 GO:0032211 GO:0032879 GO:0032991 GO:0033036 GO:0033043 GO:0033044 GO:0034470 GO:0034641 GO:0034655 GO:0034660 GO:0034661 GO:0035327 GO:0040029 GO:0042254 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043632 GO:0043633 GO:0043634 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045934 GO:0046483 GO:0046700 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0051052 GO:0051053 GO:0051128 GO:0051129 GO:0051171 GO:0051172 GO:0051179 GO:0051641 GO:0060255 GO:0065007 GO:0065008 GO:0070013 GO:0070727 GO:0071025 GO:0071027 GO:0071028 GO:0071029 GO:0071030 GO:0071033 GO:0071034 GO:0071035 GO:0071043 GO:0071044 GO:0071046 GO:0071048 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0090305 GO:0090501 GO:0090503 GO:0140098 GO:1901360 GO:1901361 GO:1901575 GO:1902494 GO:1904356 GO:1904357 GO:1904872 GO:1905354 GO:2000112 GO:2000113 GO:2000278 GO:2000279 GO:2001251
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

924

Amino Acids

104.59

Weight (kDa)

6.49

Isoelectric Point (pI)

51.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DNA_pol_A_exo1 PF01612 111 - 278 3.1e-50 3'-5' exonuclease
HRDC PF00570 347 - 391 9.6e-08 HRDC domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1392
AarI CACCTGC 3 cut(s) 1630, 1973, 2269
Acc36I ACCTGC 3 cut(s) 1630, 1973, 2269
Acc65I GGTACC 1 cut(s) 1740
AccB1I GGYRCC 2 cut(s) 1740, 2378
AccI GTMKAC 3 cut(s) 1161, 2502, 2736
AclWI GGATC 3 cut(s) 2408, 2503, 2592
AcoI YGGCCR 3 cut(s) 159, 527, 997
AcsI RAATTY 8 cut(s) 229, 304, 1484, 1591, 1886, 2106, 2440, 2726
AcuI CTGAAG 3 cut(s) 1307, 2156, 2205
AcyI GRCGYC 1 cut(s) 1654
AdeI CACNNNGTG 1 cut(s) 2705
AfaI GTAC 6 cut(s) 173, 929, 1083, 1742, 2295, 2485
AfiI CCNNNNNNNGG 1 cut(s) 140
AflIII ACRYGT 2 cut(s) 909, 1164
AhdI GACNNNNNGTC 1 cut(s) 351
AjnI CCWGG 2 cut(s) 952, 1332
Alw26I GTCTC 5 cut(s) 338, 736, 1226, 2095, 2635
AlwI GGATC 3 cut(s) 2408, 2503, 2592
AlwNI CAGNNNCTG 2 cut(s) 1187, 2228
AoxI GGCC 4 cut(s) 159, 527, 814, 997
ApeKI GCWGC 8 cut(s) 136, 262, 415, 592, 965, 1853, 1880, 2012
ApoI RAATTY 8 cut(s) 229, 304, 1484, 1591, 1886, 2106, 2440, 2726
ArsI GACNNNNNNTTYG 2 cut(s) 289, 321
Asp700I GAANNNNTTC 3 cut(s) 1459, 2215, 2661
Asp718I GGTACC 1 cut(s) 1740
AspLEI GCGC 5 cut(s) 40, 215, 262, 1047, 2031
AspS9I GGNCC 3 cut(s) 2007, 2036, 2561
AsuC2I CCSGG 1 cut(s) 2421
AsuHPI GGTGA 3 cut(s) 31, 942, 1730
AvaII GGWCC 3 cut(s) 2007, 2036, 2561
BalI TGGCCA 1 cut(s) 999
BanI GGYRCC 2 cut(s) 1740, 2378
BanII GRGCYC 1 cut(s) 1647
BauI CACGAG 2 cut(s) 1077, 1756
BbsI GAAGAC 3 cut(s) 58, 741, 1357
BbvCI CCTCAGC 2 cut(s) 1974, 2229
BbvI GCAGC 8 cut(s) 148, 249, 427, 579, 952, 1840, 1867, 1999
BccI CCATC 8 cut(s) 361, 1066, 1234, 1240, 1529, 2056, 2453, 2606
BceAI ACGGC 6 cut(s) 72, 163, 226, 801, 969, 2043
BcgI CGANNNNNNTGC 4 cut(s) 761, 795, 1433, 1467
BciT130I CCWGG 2 cut(s) 954, 1334
BciVI GTATCC 1 cut(s) 484
BcnI CCSGG 1 cut(s) 2421
BcoDI GTCTC 5 cut(s) 338, 736, 1226, 2095, 2635
BfaI CTAG 4 cut(s) 119, 546, 894, 1152
BfmI CTRYAG 5 cut(s) 1158, 1246, 1762, 1854, 1881
BfoI RGCGCY 1 cut(s) 41
BfuAI ACCTGC 3 cut(s) 1630, 1973, 2269
BfuI GTATCC 1 cut(s) 484
BglI GCCNNNNNGGC 2 cut(s) 1005, 1651
BglII AGATCT 2 cut(s) 393, 2392
BlpI GCTNAGC 1 cut(s) 828
Bme1390I CCNGG 3 cut(s) 954, 1334, 2421
Bme18I GGWCC 3 cut(s) 2007, 2036, 2561
BmeRI GACNNNNNGTC 1 cut(s) 351
BmgT120I GGNCC 3 cut(s) 2007, 2036, 2561
BmiI GGNNCC 4 cut(s) 83, 312, 1742, 2380
BmrFI CCNGG 3 cut(s) 954, 1334, 2421
BmrI ACTGGG 1 cut(s) 1496
BmsI GCATC 8 cut(s) 244, 532, 778, 1028, 1969, 2215, 2356, 2765
BmuI ACTGGG 1 cut(s) 1496
BpiI GAAGAC 3 cut(s) 58, 741, 1357
BpmI CTGGAG 5 cut(s) 100, 760, 975, 1262, 2262
Bpu10I CCTNAGC 2 cut(s) 1974, 2229
Bpu1102I GCTNAGC 1 cut(s) 828
BpuEI CTTGAG 3 cut(s) 445, 908, 1117
BpuMI CCSGG 1 cut(s) 2421
Bsa29I ATCGAT 1 cut(s) 2403
BsaBI GATNNNNATC 1 cut(s) 222
BsaHI GRCGYC 1 cut(s) 1654
BsaI GGTCTC 1 cut(s) 1226
BsaJI CCNNGG 3 cut(s) 565, 1333, 2032
BsaXI ACNNNNNCTCC 2 cut(s) 73, 103
Bsc4I CCNNNNNNNGG 1 cut(s) 140
Bse118I RCCGGY 2 cut(s) 1047, 1448
Bse1I ACTGG 5 cut(s) 530, 681, 743, 1386, 1502
Bse3DI GCAATG 4 cut(s) 807, 1176, 1678, 2431
Bse8I GATNNNNATC 1 cut(s) 222
BseBI CCWGG 2 cut(s) 954, 1334
BseCI ATCGAT 1 cut(s) 2403
BseDI CCNNGG 3 cut(s) 565, 1333, 2032
BseGI GGATG 8 cut(s) 235, 1264, 1984, 2048, 2151, 2371, 2665, 2698
BseJI GATNNNNATC 1 cut(s) 222
BseLI CCNNNNNNNGG 1 cut(s) 140
BseMI GCAATG 4 cut(s) 807, 1176, 1678, 2431
BseMII CTCAG 9 cut(s) 66, 339, 402, 459, 819, 1965, 2103, 2220, 2387
BseNI ACTGG 5 cut(s) 530, 681, 743, 1386, 1502
BseRI GAGGAG 4 cut(s) 377, 2142, 2246, 2374
BseXI GCAGC 8 cut(s) 148, 249, 427, 579, 952, 1840, 1867, 1999
BseYI CCCAGC 1 cut(s) 2688
BsgI GTGCAG 1 cut(s) 791
Bsh1285I CGRYCG 1 cut(s) 1453
BshFI GGCC 4 cut(s) 161, 529, 816, 999
BshNI GGYRCC 2 cut(s) 1740, 2378
BshVI ATCGAT 1 cut(s) 2403
BsiEI CGRYCG 1 cut(s) 1453
BsiSI CCGG 4 cut(s) 1048, 1449, 2421, 2685
BslFI GGGAC 2 cut(s) 614, 846
BslI CCNNNNNNNGG 1 cut(s) 140
BsmAI GTCTC 5 cut(s) 338, 736, 1226, 2095, 2635
BsmFI GGGAC 2 cut(s) 614, 846
BsmI GAATGC 2 cut(s) 1042, 1773
BsnI GGCC 4 cut(s) 161, 529, 816, 999
Bso31I GGTCTC 1 cut(s) 1226
Bsp1286I GDGCHC 1 cut(s) 1647
Bsp1407I TGTACA 3 cut(s) 927, 1081, 2293
Bsp143I GATC 8 cut(s) 393, 1114, 1303, 2392, 2400, 2495, 2510, 2584
Bsp1720I GCTNAGC 1 cut(s) 828
Bsp19I CCATGG 2 cut(s) 565, 2032
BspANI GGCC 4 cut(s) 161, 529, 816, 999
BspCNI CTCAG 9 cut(s) 65, 340, 403, 460, 820, 1966, 2104, 2221, 2388
BspDI ATCGAT 1 cut(s) 2403
BspHI TCATGA 2 cut(s) 1804, 2155
BspLI GGNNCC 4 cut(s) 83, 312, 1742, 2380
BspMAI CTGCAG 3 cut(s) 1250, 1858, 1885
BspMI ACCTGC 3 cut(s) 1630, 1973, 2269
BspPI GGATC 3 cut(s) 2408, 2503, 2592
BspT107I GGYRCC 2 cut(s) 1740, 2378
BspTNI GGTCTC 1 cut(s) 1226
BsrDI GCAATG 4 cut(s) 807, 1176, 1678, 2431
BsrFI RCCGGY 2 cut(s) 1047, 1448
BsrGI TGTACA 3 cut(s) 927, 1081, 2293
BsrI ACTGG 5 cut(s) 530, 681, 743, 1386, 1502
BssAI RCCGGY 2 cut(s) 1047, 1448
BssECI CCNNGG 3 cut(s) 565, 1333, 2032
BssMI GATC 8 cut(s) 393, 1114, 1303, 2392, 2400, 2495, 2510, 2584
BssNI GRCGYC 1 cut(s) 1654
BssSI CACGAG 2 cut(s) 1077, 1756
BssT1I CCWWGG 2 cut(s) 565, 2032
Bst2BI CACGAG 2 cut(s) 1077, 1756
Bst2UI CCWGG 2 cut(s) 954, 1334
Bst6I CTCTTC 1 cut(s) 80
BstACI GRCGYC 1 cut(s) 1654
BstAPI GCANNNNNTGC 1 cut(s) 2762
BstAUI TGTACA 3 cut(s) 927, 1081, 2293
BstC8I GCNNGC 3 cut(s) 42, 814, 1446
BstDSI CCRYGG 2 cut(s) 565, 2032
BstF5I GGATG 8 cut(s) 235, 1264, 1984, 2048, 2151, 2371, 2665, 2698
BstH2I RGCGCY 1 cut(s) 41
BstHHI GCGC 5 cut(s) 40, 215, 262, 1047, 2031
BstKTI GATC 8 cut(s) 396, 1117, 1306, 2395, 2403, 2498, 2513, 2587
BstMAI GTCTC 5 cut(s) 338, 736, 1226, 2095, 2635
BstMBI GATC 8 cut(s) 393, 1114, 1303, 2392, 2400, 2495, 2510, 2584
BstMCI CGRYCG 1 cut(s) 1453
BstNI CCWGG 2 cut(s) 954, 1334
BstNSI RCATGY 3 cut(s) 913, 1168, 1934
BstSCI CCNGG 3 cut(s) 952, 1332, 2419
BstSFI CTRYAG 5 cut(s) 1158, 1246, 1762, 1854, 1881
BstV1I GCAGC 8 cut(s) 148, 249, 427, 579, 952, 1840, 1867, 1999
BstV2I GAAGAC 3 cut(s) 58, 741, 1357
BstX2I RGATCY 2 cut(s) 393, 2392
BstYI RGATCY 2 cut(s) 393, 2392
Bsu15I ATCGAT 1 cut(s) 2403
BsuI GTATCC 1 cut(s) 484
BsuRI GGCC 4 cut(s) 161, 529, 816, 999
BsuTUI ATCGAT 1 cut(s) 2403
BtgI CCRYGG 2 cut(s) 565, 2032
BtsCI GGATG 8 cut(s) 235, 1264, 1984, 2048, 2151, 2371, 2665, 2698
BtsI GCAGTG 1 cut(s) 255
BtsIMutI CAGTG 6 cut(s) 106, 255, 674, 1355, 2364, 2710
BveI ACCTGC 3 cut(s) 1630, 1973, 2269
Cac8I GCNNGC 3 cut(s) 42, 814, 1446
CaiI CAGNNNCTG 2 cut(s) 1187, 2228
CciI TCATGA 2 cut(s) 1804, 2155
CfoI GCGC 5 cut(s) 40, 215, 262, 1047, 2031
Cfr10I RCCGGY 2 cut(s) 1047, 1448
Cfr13I GGNCC 3 cut(s) 2007, 2036, 2561
ClaI ATCGAT 1 cut(s) 2403
CpoI CGGWCCG 1 cut(s) 2007
CseI GACGC 2 cut(s) 1643, 2722
Csp6I GTAC 6 cut(s) 172, 928, 1082, 1741, 2294, 2484
CspI CGGWCCG 1 cut(s) 2007
CviQI GTAC 6 cut(s) 172, 928, 1082, 1741, 2294, 2484
DpnI GATC 8 cut(s) 395, 1116, 1305, 2394, 2402, 2497, 2512, 2586
DpnII GATC 8 cut(s) 393, 1114, 1303, 2392, 2400, 2495, 2510, 2584
DraI TTTAAA 1 cut(s) 993
DraIII CACNNNGTG 1 cut(s) 2705
DriI GACNNNNNGTC 1 cut(s) 351
EaeI YGGCCR 3 cut(s) 159, 527, 997
Eam1104I CTCTTC 1 cut(s) 80
Eam1105I GACNNNNNGTC 1 cut(s) 351
EarI CTCTTC 1 cut(s) 80
EciI GGCGGA 2 cut(s) 263, 264
Eco130I CCWWGG 2 cut(s) 565, 2032
Eco24I GRGCYC 1 cut(s) 1647
Eco31I GGTCTC 1 cut(s) 1226
Eco32I GATATC 1 cut(s) 1810
Eco47I GGWCC 3 cut(s) 2007, 2036, 2561
Eco57I CTGAAG 3 cut(s) 1307, 2156, 2205
EcoRI GAATTC 2 cut(s) 229, 2726
EcoRII CCWGG 2 cut(s) 952, 1332
EcoRV GATATC 1 cut(s) 1810
EcoT14I CCWWGG 2 cut(s) 565, 2032
EcoT22I ATGCAT 1 cut(s) 1773
EcoT38I GRGCYC 1 cut(s) 1647
ErhI CCWWGG 2 cut(s) 565, 2032
FalI AAGNNNNNCTT 2 cut(s) 2203, 2235
FaqI GGGAC 2 cut(s) 614, 846
FblI GTMKAC 3 cut(s) 1161, 2502, 2736
FokI GGATG 8 cut(s) 222, 1271, 1991, 2035, 2158, 2378, 2652, 2705
FriOI GRGCYC 1 cut(s) 1647
FspBI CTAG 4 cut(s) 119, 546, 894, 1152
GlaI GCGC 5 cut(s) 39, 214, 261, 1046, 2030
GsaI CCCAGC 1 cut(s) 2692
GsuI CTGGAG 5 cut(s) 100, 760, 975, 1262, 2262
HaeII RGCGCY 1 cut(s) 41
HaeIII GGCC 4 cut(s) 161, 529, 816, 999
HapII CCGG 4 cut(s) 1048, 1449, 2421, 2685
HgaI GACGC 2 cut(s) 1643, 2722
HhaI GCGC 5 cut(s) 40, 215, 262, 1047, 2031
Hin1I GRCGYC 1 cut(s) 1654
Hin6I GCGC 5 cut(s) 38, 213, 260, 1045, 2029
HinP1I GCGC 5 cut(s) 38, 213, 260, 1045, 2029
HincII GTYRAC 1 cut(s) 1170
HindII GTYRAC 1 cut(s) 1170
HindIII AAGCTT 4 cut(s) 945, 1093, 1568, 2412
HpaI GTTAAC 1 cut(s) 1170
HpaII CCGG 4 cut(s) 1048, 1449, 2421, 2685
HphI GGTGA 3 cut(s) 31, 942, 1730
Hpy99I CGWCG 2 cut(s) 1590, 2332
HpyAV CCTTC 5 cut(s) 466, 998, 1661, 2356, 2691
HpyCH4IV ACGT 2 cut(s) 877, 2524
HpySE526I ACGT 2 cut(s) 877, 2524
Hsp92I GRCGYC 1 cut(s) 1654
HspAI GCGC 5 cut(s) 38, 213, 260, 1045, 2029
KpnI GGTACC 1 cut(s) 1744
KspAI GTTAAC 1 cut(s) 1170
Kzo9I GATC 8 cut(s) 393, 1114, 1303, 2392, 2400, 2495, 2510, 2584
LmnI GCTCC 4 cut(s) 81, 101, 1150, 2281
Lsp1109I GCAGC 8 cut(s) 148, 249, 427, 579, 952, 1840, 1867, 1999
LweI GCATC 8 cut(s) 244, 532, 778, 1028, 1969, 2215, 2356, 2765
MaeI CTAG 4 cut(s) 119, 546, 894, 1152
MaeII ACGT 2 cut(s) 877, 2524
MalI GATC 8 cut(s) 395, 1116, 1305, 2394, 2402, 2497, 2512, 2586
MboI GATC 8 cut(s) 393, 1114, 1303, 2392, 2400, 2495, 2510, 2584
MflI RGATCY 2 cut(s) 393, 2392
MhlI GDGCHC 1 cut(s) 1647
MlsI TGGCCA 1 cut(s) 999
MluNI TGGCCA 1 cut(s) 999
MlyI GAGTC 2 cut(s) 361, 2143
MmeI TCCRAC 4 cut(s) 231, 339, 1172, 1568
Mox20I TGGCCA 1 cut(s) 999
Mph1103I ATGCAT 1 cut(s) 1773
MroXI GAANNNNTTC 3 cut(s) 1459, 2215, 2661
MscI TGGCCA 1 cut(s) 999
MseI TTAA 8 cut(s) 191, 288, 992, 1169, 1205, 1386, 2594, 2770
MslI CAYNNNNRTG 4 cut(s) 240, 612, 993, 1257
Msp20I TGGCCA 1 cut(s) 999
MspA1I CMGCKG 2 cut(s) 1853, 2012
MspI CCGG 4 cut(s) 1048, 1449, 2421, 2685
MspR9I CCNGG 3 cut(s) 954, 1334, 2421
Mva1269I GAATGC 2 cut(s) 1042, 1773
MvaI CCWGG 2 cut(s) 954, 1334
NciI CCSGG 1 cut(s) 2421
NcoI CCATGG 2 cut(s) 565, 2032
NdeII GATC 8 cut(s) 393, 1114, 1303, 2392, 2400, 2495, 2510, 2584
NlaIV GGNNCC 4 cut(s) 83, 312, 1742, 2380
NmuCI GTSAC 7 cut(s) 253, 295, 709, 1402, 1556, 1832, 2555
NsiI ATGCAT 1 cut(s) 1773
NspI RCATGY 3 cut(s) 913, 1168, 1934
PagI TCATGA 2 cut(s) 1804, 2155
PaqCI CACCTGC 3 cut(s) 1630, 1973, 2269
PciI ACATGT 2 cut(s) 909, 1164
PcsI WCGNNNNNNNCGW 1 cut(s) 176
PctI GAATGC 2 cut(s) 1042, 1773
PdmI GAANNNNTTC 3 cut(s) 1459, 2215, 2661
PfeI GAWTC 9 cut(s) 144, 203, 223, 1318, 1521, 1894, 1922, 2300, 2600
PleI GAGTC 2 cut(s) 360, 2143
PpsI GAGTC 2 cut(s) 360, 2143
PscI ACATGT 2 cut(s) 909, 1164
PsiI TTATAA 1 cut(s) 1392
Psp6I CCWGG 2 cut(s) 952, 1332
PspFI CCCAGC 1 cut(s) 2688
PspGI CCWGG 2 cut(s) 952, 1332
PspN4I GGNNCC 4 cut(s) 83, 312, 1742, 2380
PspPI GGNCC 3 cut(s) 2007, 2036, 2561
PsrI GAACNNNNNNTAC 2 cut(s) 164, 196
PstI CTGCAG 3 cut(s) 1250, 1858, 1885
PstNI CAGNNNCTG 2 cut(s) 1187, 2228
PsuI RGATCY 2 cut(s) 393, 2392
RsaI GTAC 6 cut(s) 173, 929, 1083, 1742, 2295, 2485
RsaNI GTAC 6 cut(s) 172, 928, 1082, 1741, 2294, 2484
RseI CAYNNNNRTG 4 cut(s) 240, 612, 993, 1257
Rsr2I CGGWCCG 1 cut(s) 2007
RsrII CGGWCCG 1 cut(s) 2007
SaqAI TTAA 8 cut(s) 191, 288, 992, 1169, 1205, 1386, 2594, 2770
Sau3AI GATC 8 cut(s) 393, 1114, 1303, 2392, 2400, 2495, 2510, 2584
Sau96I GGNCC 3 cut(s) 2007, 2036, 2561
SchI GAGTC 2 cut(s) 361, 2143
ScrFI CCNGG 3 cut(s) 954, 1334, 2421
SduI GDGCHC 1 cut(s) 1647
SfaNI GCATC 8 cut(s) 244, 532, 778, 1028, 1969, 2215, 2356, 2765
SfcI CTRYAG 5 cut(s) 1158, 1246, 1762, 1854, 1881
SinI GGWCC 3 cut(s) 2007, 2036, 2561
SmiI ATTTAAAT 1 cut(s) 993
SmiMI CAYNNNNRTG 4 cut(s) 240, 612, 993, 1257
SmlI CTYRAG 3 cut(s) 424, 887, 1096
SmoI CTYRAG 3 cut(s) 424, 887, 1096
SspI AATATT 1 cut(s) 978
SspMI CTAG 4 cut(s) 119, 546, 894, 1152
StyD4I CCNGG 3 cut(s) 952, 1332, 2419
StyI CCWWGG 2 cut(s) 565, 2032
SwaI ATTTAAAT 1 cut(s) 993
TaiI ACGT 2 cut(s) 880, 2527
TaqI TCGA 8 cut(s) 342, 464, 781, 1453, 1465, 2327, 2403, 2509
TaqII GACCGA 1 cut(s) 52
TatI WGTACW 4 cut(s) 927, 1081, 2293, 2483
TauI GCSGC 4 cut(s) 87, 136, 529, 1853
TfiI GAWTC 9 cut(s) 144, 203, 223, 1318, 1521, 1894, 1922, 2300, 2600
Tru1I TTAA 8 cut(s) 191, 288, 992, 1169, 1205, 1386, 2594, 2770
Tru9I TTAA 8 cut(s) 191, 288, 992, 1169, 1205, 1386, 2594, 2770
TscAI CASTG 6 cut(s) 113, 262, 681, 1362, 2364, 2710
TseFI GTSAC 7 cut(s) 253, 295, 709, 1402, 1556, 1832, 2555
TseI GCWGC 8 cut(s) 136, 262, 415, 592, 965, 1853, 1880, 2012
Tsp45I GTSAC 7 cut(s) 253, 295, 709, 1402, 1556, 1832, 2555
TspGWI ACGGA 4 cut(s) 156, 228, 314, 2259
TspRI CASTG 6 cut(s) 113, 262, 681, 1362, 2364, 2710
VpaK11BI GGWCC 3 cut(s) 2007, 2036, 2561
XapI RAATTY 8 cut(s) 229, 304, 1484, 1591, 1886, 2106, 2440, 2726
XceI RCATGY 3 cut(s) 913, 1168, 1934
XmiI GTMKAC 3 cut(s) 1161, 2502, 2736
XmnI GAANNNNTTC 3 cut(s) 1459, 2215, 2661
XspI CTAG 4 cut(s) 119, 546, 894, 1152
Zsp2I ATGCAT 1 cut(s) 1773
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.