Rh2CG524500

3'-5' exonuclease

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0005671
Physical Location & Seq
Forward (+)
69948282 .. 69953730
5449 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG524500.1

Sequence Viewer

Length: 2772 bp
ATGGAGAAGAGAGAAAAGGTGAAGTTGATAGTAGCGGCGGCCCTCGCTTCTCTCTCCGTCTTCTTCCTCTACCGGAGGAGACGCCGAAACTGCCCCCAAACTCACTGTTATTTACGAGACGACCCGAACAAGCCGCAGCACGGATTCAAGCGAGTCTTGGCCGACAATTCCTACTCTCCGTTCAAGCATTTCAACCCCGCCGACGACTCTAACGTCGGCGGAGCAGATAAGAATTGGAATTCGCATCCTTACGAGGCGGAGATCACGGCGGTGATGGAAAGTCCGCCGATTGAGCTGAAATGTGTGACGGAGAAGAATTTGGATTCGGAAATGAGGGAGGAGTATGTTTGGGTTGAGAATGAGACTCAGTTGAAGGAAATGGTTGAGGTTTTGAGTAAAGAGAAGATCTTTGGAGTTGATACTGAGCAGCATAGCTTAAGGTCATTTTTGGGATTTACTGCTTTGATACAGATTTCGACTGAGAAGGAAGATTATTTGGTGGACACTATTGCTTTACATGACAGTATGAGCCTTTTGCAGCCGGTTTTCGCCGATGCTGGTATCTGCAAGGTGTTCCATGGGGCAGATAGTGATGTTCTCTGGCTGCAAAGGGACTTTCATATTTATGTTGTCAATATGTTTGATACTGCAAAGGCTTGTGAAGTGTTGTCAAAACCGCAGAAATCACTGGCTTATTTACTTGAATCTTACTGTGGAGTCGTCACTAACAAATTGTTTCAGCGTGAAGACTGGAGACAACGCCCTTTGTCAATGGAAATGGTGCAATATGCTCGGACAGATGCACACTATCTACTTTACATTGCAGGCCGTTTACTAGCTGAGCTGGATGTGTTGGATAATGAAAACTCTTGTCCCAATGACAAATTCCGTTTTGTTCTCGAGGCTAGTCGGCGTTCAAACATGATATGTTTGCAACTGTATACGAAAGACATAGAAGCTTCGCCTGGAGAGTCTGCTGCTTCATCAATATTTAGCCGTCAATTAAATGGCCAAGGAGGCATTTCATCAGCATCTTATGAAATCCAGAATTCTGTGAGACGACTTTGTGCATGGAGAGATTTGATGGCTCGTGTACATGATGAGAGCTTGAGATATGTAATATCAGATCAGGCTATTGTTGCCCTTGCAGAAAAAGCTCCAACCAACCCTGCAGACATGTTAACCACCATTGCAGAAGCTGATGATAATGTGGATTCAAGTTTCAATTCTGGCCTCTCATCTCCCTCTCCTGTGGTCTGCAGTCATTTGAATGATTTTTATTATCTGCTCCAGAAGAAAGTAGGCAATCCTGATGATCTCTTACCCATGATTCTTCAGAACTGCCTGGGTCAAAAAGGGAGTTGCCCACTGTCTGTCTTCAACTATGCTTTACTGGTTAATTATAATATGAAAGTACCACTGGTTTCTAAACAAAATGGGGTCAGAAATCCAAAGCAAGTCGGTCGAATGGCTTCGCGAAAGCTGTTTGTTCAAAAATTTTCCTGCAAATCCCCAGTTTATCATAATTGCAGGATCTATGCAAATGATGGGCGTTTGCTGTGTTACTGTGACCGCAGAAAGCTTGAATGGTATCTTCATCGGAATTTGGCTAAACTTGTTGAGGACAATCCACCTGGAATTATGCTTCTTTTTGAGCCCAAAGGCCGTCCAGAAGATGAAGGCAATGATTTCTACATTCAAAGTAAGAAAAATATGTGTGTTGGCTGCGGTGAAAGAAATCATTACTTACGGTACCGAATTATTCCCTCATGCTACAGAATGCACTTCCCTGAACATTTGAAAAGCCACCGTTCTCATGATATTGTCCTACTATGCGTGGACTGTCACGAAATTGCTCATGCCGCTGCAGAGAAGTATAAAAGAAAGATTGCTGCAGAATTTGGGATTCCACTTTTTGTTCGTAAAGTGGTTGATTCACAACAAGCTCAATCTTTATCTGGGGCATCTGTGCCTGCAACAAATGTTGAGGAAGCAGGTGTATCTCCTTTACAGTTGCGAACTGCTGCTATGGCTCTTTTGCGCCATGCATCAACAATGCCATCCAAGCGCCGTGAGGAACTGACAGAGATTGTTATGACATTTTATGGAGGGAGGCAAATCTCTGAGGAAGATTTAGAAAAGGCTTTGCTTGTTGGGATGACTCCTCATGAGAAAAGACGACTTCAGCAGAAGAAAGGGTTTTCTTTTCAACATTCTAGAGGGAGTATTTCTTCAGATGCAGAGGAGAAAATTACTGTTAACATGTCCACATCTGCCACTCCAGATGCTTCAGAAGTTGATACTGTACATGAATCTTGCACCAATGAAAACAAAGCATCTATGATAAACCAAGATGAAGATGTTTTCACAGTGAAGGATGCTGATTTAGGCAACTCCGCTTTAGATTTGAGGATTGGTGAAAAAGCATCTCCAAGCAATGAGAAGAACATGAGTTCCGATACTACACTTGTTTCTGTTGTAAATGGTGATGGTATTTATGATGGTAGAAGTACACCAAATGGATCAGTAGACTTCCGTTCTACTTCCAAACGTAATCATAAATCAAAACACTCCCTCTTAGGACATGGTCCACATGGAAGGCAAGTTGTGGATCATCTGTTAAAGGAATCTGGAGAAGATGGTATTAGTCAGTTCTGTCAAAGGTGGAGACAAGTATTTGTTGAAACTGTTCATCCCCGTTTTTTACCTGCCGGCTGGGATATTACACACAGGTACATACTTAAACCTAAGATGATAGCAATGAATAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000175 GO:0000178 GO:0000460 GO:0000785 GO:0000956 GO:0003674 GO:0003824 GO:0004518 GO:0004527 GO:0004532 GO:0004540 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005730 GO:0005737 GO:0005829 GO:0006139 GO:0006364 GO:0006396 GO:0006401 GO:0006402 GO:0006403 GO:0006725 GO:0006807 GO:0007549 GO:0008150 GO:0008152 GO:0008298 GO:0008334 GO:0008408 GO:0009048 GO:0009056 GO:0009057 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0010639 GO:0016070 GO:0016071 GO:0016072 GO:0016075 GO:0016787 GO:0016788 GO:0016796 GO:0016896 GO:0019219 GO:0019222 GO:0019439 GO:0022613 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031974 GO:0031981 GO:0032204 GO:0032205 GO:0032210 GO:0032211 GO:0032879 GO:0032991 GO:0033036 GO:0033043 GO:0033044 GO:0034470 GO:0034641 GO:0034655 GO:0034660 GO:0034661 GO:0035327 GO:0040029 GO:0042254 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043632 GO:0043633 GO:0043634 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045934 GO:0046483 GO:0046700 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0051052 GO:0051053 GO:0051128 GO:0051129 GO:0051171 GO:0051172 GO:0051179 GO:0051641 GO:0060255 GO:0065007 GO:0065008 GO:0070013 GO:0070727 GO:0071025 GO:0071027 GO:0071028 GO:0071029 GO:0071030 GO:0071033 GO:0071034 GO:0071035 GO:0071043 GO:0071044 GO:0071046 GO:0071048 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0090305 GO:0090501 GO:0090503 GO:0140098 GO:1901360 GO:1901361 GO:1901575 GO:1902494 GO:1904356 GO:1904357 GO:1904872 GO:1905354 GO:2000112 GO:2000113 GO:2000278 GO:2000279 GO:2001251
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DNA_pol_A_exo1 HRDC

Protein Analysis

923

Amino Acids

104.46

Weight (kDa)

7.02

Isoelectric Point (pI)

50.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DNA_pol_A_exo1 PF01612 115 - 282 2.7e-50 3'-5' exonuclease
HRDC PF00570 352 - 395 1.3e-09 HRDC domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1404
AarI CACCTGC 1 cut(s) 1985
AasI GACNNNNNNGTC 1 cut(s) 212
Acc36I ACCTGC 2 cut(s) 1985, 2716
Acc65I GGTACC 1 cut(s) 1752
AccB1I GGYRCC 1 cut(s) 1752
AccI GTMKAC 2 cut(s) 941, 2529
AccII CGCG 1 cut(s) 1477
AclWI GGATC 3 cut(s) 1541, 2530, 2619
AcoI YGGCCR 2 cut(s) 159, 1009
AcsI RAATTY 7 cut(s) 238, 316, 884, 1048, 1496, 1603, 1898
AcuI CTGAAG 4 cut(s) 1319, 2168, 2217, 2274
AcyI GRCGYC 1 cut(s) 82
AfaI GTAC 6 cut(s) 1095, 1416, 1754, 2307, 2512, 2735
AfiI CCNNNNNNNGG 1 cut(s) 140
AflII CTTAAG 1 cut(s) 436
AflIII ACRYGT 2 cut(s) 1176, 2262
AjnI CCWGG 3 cut(s) 964, 1344, 1633
AjuI GAANNNNNNNTTGG 2 cut(s) 869, 901
AleI CACNNNNGTG 1 cut(s) 269
AloI GAACNNNNNNTCC 2 cut(s) 2438, 2470
Alw26I GTCTC 6 cut(s) 73, 111, 356, 748, 1051, 2662
AlwI GGATC 3 cut(s) 1541, 2530, 2619
AlwNI CAGNNNCTG 1 cut(s) 1199
Ama87I CYCGRG 1 cut(s) 899
AoxI GGCC 6 cut(s) 39, 159, 826, 1009, 1231, 1663
ApeKI GCWGC 9 cut(s) 136, 427, 538, 604, 977, 1725, 1865, 1892, 2024
ApoI RAATTY 7 cut(s) 238, 316, 884, 1048, 1496, 1603, 1898
Asp700I GAANNNNTTC 2 cut(s) 1471, 2688
Asp718I GGTACC 1 cut(s) 1752
AspLEI GCGC 2 cut(s) 2043, 2070
AspS9I GGNCC 2 cut(s) 40, 2588
AsuHPI GGTGA 5 cut(s) 31, 283, 1742, 2429, 2498
AvaI CYCGRG 1 cut(s) 899
AvaII GGWCC 1 cut(s) 2588
BalI TGGCCA 1 cut(s) 1011
BanI GGYRCC 1 cut(s) 1752
BanII GRGCYC 1 cut(s) 1659
BauI CACGAG 1 cut(s) 1089
BbsI GAAGAC 3 cut(s) 52, 753, 1369
BbvI GCAGC 9 cut(s) 148, 439, 550, 591, 964, 1712, 1852, 1879, 2011
BccI CCATC 7 cut(s) 268, 1078, 1541, 2068, 2483, 2495, 2633
BceAI ACGGC 5 cut(s) 282, 813, 981, 1650, 2055
BcgI CGANNNNNNTGC 4 cut(s) 773, 807, 1445, 1479
BciT130I CCWGG 3 cut(s) 966, 1346, 1635
BcoDI GTCTC 6 cut(s) 73, 111, 356, 748, 1051, 2662
BfaI CTAG 3 cut(s) 836, 906, 2217
BfmI CTRYAG 5 cut(s) 1170, 1258, 1774, 1866, 1893
BfoI RGCGCY 1 cut(s) 2071
BfrI CTTAAG 1 cut(s) 436
BfuAI ACCTGC 2 cut(s) 1985, 2716
BglI GCCNNNNNGGC 1 cut(s) 1017
BglII AGATCT 1 cut(s) 405
BlpI GCTNAGC 1 cut(s) 840
Bme1390I CCNGG 3 cut(s) 966, 1346, 1635
Bme18I GGWCC 1 cut(s) 2588
BmeT110I CYCGRG 1 cut(s) 899
BmgT120I GGNCC 2 cut(s) 40, 2588
BmiI GGNNCC 1 cut(s) 1754
BmrFI CCNGG 3 cut(s) 966, 1346, 1635
BmrI ACTGGG 1 cut(s) 1508
BmuI ACTGGG 1 cut(s) 1508
BpiI GAAGAC 3 cut(s) 52, 753, 1369
BpmI CTGGAG 5 cut(s) 772, 987, 1274, 2265, 2652
Bpu1102I GCTNAGC 1 cut(s) 840
BpuEI CTTGAG 1 cut(s) 1129
BsaHI GRCGYC 1 cut(s) 82
BsaJI CCNNGG 3 cut(s) 577, 1012, 1345
BsaWI WCCGGW 1 cut(s) 72
Bsc4I CCNNNNNNNGG 1 cut(s) 140
Bse118I RCCGGY 2 cut(s) 541, 2711
Bse1I ACTGG 5 cut(s) 693, 755, 1398, 1425, 1514
Bse3DI GCAATG 5 cut(s) 819, 1188, 1690, 2443, 2766
BseBI CCWGG 3 cut(s) 966, 1346, 1635
BseDI CCNNGG 3 cut(s) 577, 1012, 1345
BseGI GGATG 6 cut(s) 244, 853, 2060, 2163, 2383, 2692
BseLI CCNNNNNNNGG 1 cut(s) 140
BseMI GCAATG 5 cut(s) 819, 1188, 1690, 2443, 2766
BseMII CTCAG 5 cut(s) 380, 414, 471, 831, 2115
BseNI ACTGG 5 cut(s) 693, 755, 1398, 1425, 1514
BseRI GAGGAG 4 cut(s) 91, 353, 2154, 2258
BseXI GCAGC 9 cut(s) 148, 439, 550, 591, 964, 1712, 1852, 1879, 2011
BseYI CCCAGC 1 cut(s) 2715
Bsh1236I CGCG 1 cut(s) 1477
Bsh1285I CGRYCG 1 cut(s) 1465
BshFI GGCC 6 cut(s) 41, 161, 828, 1011, 1233, 1665
BshNI GGYRCC 1 cut(s) 1752
BsiEI CGRYCG 1 cut(s) 1465
BsiHKCI CYCGRG 1 cut(s) 899
BsiSI CCGG 3 cut(s) 73, 542, 2712
BslFI GGGAC 2 cut(s) 626, 858
BslI CCNNNNNNNGG 1 cut(s) 140
BsmAI GTCTC 6 cut(s) 73, 111, 356, 748, 1051, 2662
BsmBI CGTCTC 3 cut(s) 73, 111, 1051
BsmFI GGGAC 2 cut(s) 626, 858
BsmI GAATGC 1 cut(s) 1785
BsnI GGCC 6 cut(s) 41, 161, 828, 1011, 1233, 1665
BsoBI CYCGRG 1 cut(s) 899
Bsp1286I GDGCHC 1 cut(s) 1659
Bsp1407I TGTACA 2 cut(s) 1093, 2305
Bsp143I GATC 7 cut(s) 261, 405, 1126, 1315, 1533, 2522, 2611
Bsp1720I GCTNAGC 1 cut(s) 840
Bsp19I CCATGG 1 cut(s) 577
Bsp68I TCGCGA 1 cut(s) 1477
BspANI GGCC 6 cut(s) 41, 161, 828, 1011, 1233, 1665
BspCNI CTCAG 5 cut(s) 379, 415, 472, 832, 2116
BspFNI CGCG 1 cut(s) 1477
BspHI TCATGA 2 cut(s) 1816, 2167
BspLI GGNNCC 1 cut(s) 1754
BspMAI CTGCAG 4 cut(s) 1174, 1262, 1870, 1897
BspMI ACCTGC 2 cut(s) 1985, 2716
BspPI GGATC 3 cut(s) 1541, 2530, 2619
BspT107I GGYRCC 1 cut(s) 1752
BspTI CTTAAG 1 cut(s) 436
BsrDI GCAATG 5 cut(s) 819, 1188, 1690, 2443, 2766
BsrFI RCCGGY 2 cut(s) 541, 2711
BsrGI TGTACA 2 cut(s) 1093, 2305
BsrI ACTGG 5 cut(s) 693, 755, 1398, 1425, 1514
BssAI RCCGGY 2 cut(s) 541, 2711
BssECI CCNNGG 3 cut(s) 577, 1012, 1345
BssMI GATC 7 cut(s) 261, 405, 1126, 1315, 1533, 2522, 2611
BssNAI GTATAC 1 cut(s) 942
BssNI GRCGYC 1 cut(s) 82
BssSI CACGAG 1 cut(s) 1089
BssT1I CCWWGG 2 cut(s) 577, 1012
Bst1107I GTATAC 1 cut(s) 942
Bst2BI CACGAG 1 cut(s) 1089
Bst2UI CCWGG 3 cut(s) 966, 1346, 1635
Bst6I CTCTTC 1 cut(s) 2
BstACI GRCGYC 1 cut(s) 82
BstAFI CTTAAG 1 cut(s) 436
BstAUI TGTACA 2 cut(s) 1093, 2305
BstC8I GCNNGC 3 cut(s) 826, 1974, 2713
BstDEI CTNAG 7 cut(s) 366, 423, 480, 840, 2124, 2578, 2748
BstDSI CCRYGG 1 cut(s) 577
BstF5I GGATG 6 cut(s) 244, 853, 2060, 2163, 2383, 2692
BstFNI CGCG 1 cut(s) 1477
BstH2I RGCGCY 1 cut(s) 2071
BstHHI GCGC 2 cut(s) 2043, 2070
BstKTI GATC 7 cut(s) 264, 408, 1129, 1318, 1536, 2525, 2614
BstMAI GTCTC 6 cut(s) 73, 111, 356, 748, 1051, 2662
BstMBI GATC 7 cut(s) 261, 405, 1126, 1315, 1533, 2522, 2611
BstMCI CGRYCG 1 cut(s) 1465
BstMWI GCNNNNNNNGC 9 cut(s) 44, 90, 292, 1017, 1139, 1154, 1862, 2030, 2065
BstNI CCWGG 3 cut(s) 966, 1346, 1635
BstNSI RCATGY 2 cut(s) 1180, 2266
BstSCI CCNGG 3 cut(s) 964, 1344, 1633
BstSFI CTRYAG 5 cut(s) 1170, 1258, 1774, 1866, 1893
BstUI CGCG 1 cut(s) 1477
BstV1I GCAGC 9 cut(s) 148, 439, 550, 591, 964, 1712, 1852, 1879, 2011
BstV2I GAAGAC 3 cut(s) 52, 753, 1369
BstX2I RGATCY 2 cut(s) 405, 1533
BstYI RGATCY 2 cut(s) 405, 1533
BstZ17I GTATAC 1 cut(s) 942
BsuRI GGCC 6 cut(s) 41, 161, 828, 1011, 1233, 1665
BtgI CCRYGG 1 cut(s) 577
BtsCI GGATG 6 cut(s) 244, 853, 2060, 2163, 2383, 2692
BtsIMutI CAGTG 5 cut(s) 103, 686, 1367, 1418, 2376
BtuMI TCGCGA 1 cut(s) 1477
BveI ACCTGC 2 cut(s) 1985, 2716
Cac8I GCNNGC 3 cut(s) 826, 1974, 2713
CaiI CAGNNNCTG 1 cut(s) 1199
CciI TCATGA 2 cut(s) 1816, 2167
CfoI GCGC 2 cut(s) 2043, 2070
Cfr10I RCCGGY 2 cut(s) 541, 2711
Cfr13I GGNCC 2 cut(s) 40, 2588
CseI GACGC 1 cut(s) 90
Csp6I GTAC 6 cut(s) 1094, 1415, 1753, 2306, 2511, 2734
CviQI GTAC 6 cut(s) 1094, 1415, 1753, 2306, 2511, 2734
DdeI CTNAG 7 cut(s) 366, 423, 480, 840, 2124, 2578, 2748
DpnI GATC 7 cut(s) 263, 407, 1128, 1317, 1535, 2524, 2613
DpnII GATC 7 cut(s) 261, 405, 1126, 1315, 1533, 2522, 2611
DrdI GACNNNNNNGTC 1 cut(s) 212
DseDI GACNNNNNNGTC 1 cut(s) 212
EaeI YGGCCR 2 cut(s) 159, 1009
Eam1104I CTCTTC 1 cut(s) 2
EarI CTCTTC 1 cut(s) 2
EciI GGCGGA 3 cut(s) 234, 272, 273
Eco130I CCWWGG 2 cut(s) 577, 1012
Eco24I GRGCYC 1 cut(s) 1659
Eco47I GGWCC 1 cut(s) 2588
Eco57I CTGAAG 4 cut(s) 1319, 2168, 2217, 2274
Eco88I CYCGRG 1 cut(s) 899
EcoRI GAATTC 2 cut(s) 238, 1048
EcoRII CCWGG 3 cut(s) 964, 1344, 1633
EcoT14I CCWWGG 2 cut(s) 577, 1012
EcoT22I ATGCAT 1 cut(s) 2050
EcoT38I GRGCYC 1 cut(s) 1659
ErhI CCWWGG 2 cut(s) 577, 1012
Esp3I CGTCTC 3 cut(s) 73, 111, 1051
FalI AAGNNNNNCTT 2 cut(s) 140, 172
FaqI GGGAC 2 cut(s) 626, 858
FauI CCCGC 1 cut(s) 205
FblI GTMKAC 2 cut(s) 941, 2529
FokI GGATG 6 cut(s) 231, 860, 2047, 2170, 2390, 2679
FriOI GRGCYC 1 cut(s) 1659
FspBI CTAG 3 cut(s) 836, 906, 2217
GlaI GCGC 2 cut(s) 2042, 2069
GsaI CCCAGC 1 cut(s) 2719
GsuI CTGGAG 5 cut(s) 772, 987, 1274, 2265, 2652
HaeII RGCGCY 1 cut(s) 2071
HaeIII GGCC 6 cut(s) 41, 161, 828, 1011, 1233, 1665
HapII CCGG 3 cut(s) 73, 542, 2712
HgaI GACGC 1 cut(s) 90
HhaI GCGC 2 cut(s) 2043, 2070
Hin1I GRCGYC 1 cut(s) 82
Hin6I GCGC 2 cut(s) 2041, 2068
HinP1I GCGC 2 cut(s) 2041, 2068
HincII GTYRAC 2 cut(s) 1182, 2260
HindII GTYRAC 2 cut(s) 1182, 2260
HindIII AAGCTT 2 cut(s) 957, 1580
HpaI GTTAAC 2 cut(s) 1182, 2260
HpaII CCGG 3 cut(s) 73, 542, 2712
HphI GGTGA 5 cut(s) 31, 283, 1742, 2429, 2498
Hpy99I CGWCG 2 cut(s) 206, 218
HpyAV CCTTC 5 cut(s) 367, 478, 1673, 2368, 2592
HpyCH4IV ACGT 2 cut(s) 213, 2551
HpyF10VI GCNNNNNNNGC 9 cut(s) 44, 90, 292, 1017, 1139, 1154, 1862, 2030, 2065
HpyF3I CTNAG 7 cut(s) 366, 423, 480, 840, 2124, 2578, 2748
HpySE526I ACGT 2 cut(s) 213, 2551
Hsp92I GRCGYC 1 cut(s) 82
HspAI GCGC 2 cut(s) 2041, 2068
KpnI GGTACC 1 cut(s) 1756
KroI GCCGGC 1 cut(s) 2711
KroNI GCCGGC 1 cut(s) 2713
KspAI GTTAAC 2 cut(s) 1182, 2260
Kzo9I GATC 7 cut(s) 261, 405, 1126, 1315, 1533, 2522, 2611
LmnI GCTCC 3 cut(s) 221, 1162, 1293
Lsp1109I GCAGC 9 cut(s) 148, 439, 550, 591, 964, 1712, 1852, 1879, 2011
MaeI CTAG 3 cut(s) 836, 906, 2217
MaeII ACGT 2 cut(s) 213, 2551
MaeIII GTNAC 5 cut(s) 304, 721, 1562, 1568, 1844
MalI GATC 7 cut(s) 263, 407, 1128, 1317, 1535, 2524, 2613
MboI GATC 7 cut(s) 261, 405, 1126, 1315, 1533, 2522, 2611
MflI RGATCY 2 cut(s) 405, 1533
MhlI GDGCHC 1 cut(s) 1659
MlsI TGGCCA 1 cut(s) 1011
MluNI TGGCCA 1 cut(s) 1011
MlyI GAGTC 6 cut(s) 162, 200, 358, 726, 980, 2155
MmeI TCCRAC 2 cut(s) 834, 1184
Mox20I TGGCCA 1 cut(s) 1011
Mph1103I ATGCAT 1 cut(s) 2050
MroNI GCCGGC 1 cut(s) 2711
MroXI GAANNNNTTC 2 cut(s) 1471, 2688
MscI TGGCCA 1 cut(s) 1011
MseI TTAA 7 cut(s) 437, 1004, 1181, 1398, 2259, 2621, 2742
MslI CAYNNNNRTG 3 cut(s) 269, 624, 1269
Msp20I TGGCCA 1 cut(s) 1011
MspA1I CMGCKG 1 cut(s) 1865
MspCI CTTAAG 1 cut(s) 436
MspI CCGG 3 cut(s) 73, 542, 2712
MspR9I CCNGG 3 cut(s) 966, 1346, 1635
Mva1269I GAATGC 1 cut(s) 1785
MvaI CCWGG 3 cut(s) 966, 1346, 1635
MvnI CGCG 1 cut(s) 1477
MwoI GCNNNNNNNGC 9 cut(s) 44, 90, 292, 1017, 1139, 1154, 1862, 2030, 2065
NaeI GCCGGC 1 cut(s) 2713
NcoI CCATGG 1 cut(s) 577
NdeII GATC 7 cut(s) 261, 405, 1126, 1315, 1533, 2522, 2611
NgoMIV GCCGGC 1 cut(s) 2711
NlaIV GGNNCC 1 cut(s) 1754
NmuCI GTSAC 4 cut(s) 304, 721, 1568, 1844
NruI TCGCGA 1 cut(s) 1477
NsiI ATGCAT 1 cut(s) 2050
NspI RCATGY 2 cut(s) 1180, 2266
OliI CACNNNNGTG 1 cut(s) 269
PaeR7I CTCGAG 1 cut(s) 899
PagI TCATGA 2 cut(s) 1816, 2167
PaqCI CACCTGC 1 cut(s) 1985
PciI ACATGT 2 cut(s) 1176, 2262
PcsI WCGNNNNNNNCGW 1 cut(s) 210
PctI GAATGC 1 cut(s) 1785
PdiI GCCGGC 1 cut(s) 2713
PdmI GAANNNNTTC 2 cut(s) 1471, 2688
PfeI GAWTC 9 cut(s) 144, 323, 704, 1214, 1330, 1906, 1934, 2312, 2627
PflFI GACNNNGTC 1 cut(s) 2586
PleI GAGTC 6 cut(s) 161, 200, 358, 725, 979, 2155
PpsI GAGTC 6 cut(s) 161, 200, 358, 725, 979, 2155
PscI ACATGT 2 cut(s) 1176, 2262
PsiI TTATAA 1 cut(s) 1404
Psp6I CCWGG 3 cut(s) 964, 1344, 1633
PspFI CCCAGC 1 cut(s) 2715
PspGI CCWGG 3 cut(s) 964, 1344, 1633
PspN4I GGNNCC 1 cut(s) 1754
PspPI GGNCC 2 cut(s) 40, 2588
PstI CTGCAG 4 cut(s) 1174, 1262, 1870, 1897
PstNI CAGNNNCTG 1 cut(s) 1199
PsuI RGATCY 2 cut(s) 405, 1533
PsyI GACNNNGTC 1 cut(s) 2586
RruI TCGCGA 1 cut(s) 1477
RsaI GTAC 6 cut(s) 1095, 1416, 1754, 2307, 2512, 2735
RsaNI GTAC 6 cut(s) 1094, 1415, 1753, 2306, 2511, 2734
RseI CAYNNNNRTG 3 cut(s) 269, 624, 1269
SaqAI TTAA 7 cut(s) 437, 1004, 1181, 1398, 2259, 2621, 2742
Sau3AI GATC 7 cut(s) 261, 405, 1126, 1315, 1533, 2522, 2611
Sau96I GGNCC 2 cut(s) 40, 2588
SchI GAGTC 6 cut(s) 162, 200, 358, 726, 980, 2155
ScrFI CCNGG 3 cut(s) 966, 1346, 1635
SduI GDGCHC 1 cut(s) 1659
SfcI CTRYAG 5 cut(s) 1170, 1258, 1774, 1866, 1893
Sfr274I CTCGAG 1 cut(s) 899
SinI GGWCC 1 cut(s) 2588
SlaI CTCGAG 1 cut(s) 899
SmiMI CAYNNNNRTG 3 cut(s) 269, 624, 1269
SmlI CTYRAG 3 cut(s) 436, 899, 1108
SmoI CTYRAG 3 cut(s) 436, 899, 1108
SspI AATATT 1 cut(s) 990
SspMI CTAG 3 cut(s) 836, 906, 2217
StyD4I CCNGG 3 cut(s) 964, 1344, 1633
StyI CCWWGG 2 cut(s) 577, 1012
TaiI ACGT 2 cut(s) 216, 2554
TaqI TCGA 3 cut(s) 476, 900, 1465
TaqII GACCGA 1 cut(s) 1451
TatI WGTACW 3 cut(s) 1093, 2305, 2510
TauI GCSGC 4 cut(s) 38, 41, 136, 1865
TfiI GAWTC 9 cut(s) 144, 323, 704, 1214, 1330, 1906, 1934, 2312, 2627
Tru1I TTAA 7 cut(s) 437, 1004, 1181, 1398, 2259, 2621, 2742
Tru9I TTAA 7 cut(s) 437, 1004, 1181, 1398, 2259, 2621, 2742
TscAI CASTG 5 cut(s) 110, 693, 1374, 1425, 2376
TseFI GTSAC 4 cut(s) 304, 721, 1568, 1844
TseI GCWGC 9 cut(s) 136, 427, 538, 604, 977, 1725, 1865, 1892, 2024
Tsp45I GTSAC 4 cut(s) 304, 721, 1568, 1844
TspGWI ACGGA 6 cut(s) 46, 156, 168, 323, 878, 2525
TspRI CASTG 5 cut(s) 110, 693, 1374, 1425, 2376
Tth111I GACNNNGTC 1 cut(s) 2586
Vha464I CTTAAG 1 cut(s) 436
VpaK11BI GGWCC 1 cut(s) 2588
XapI RAATTY 7 cut(s) 238, 316, 884, 1048, 1496, 1603, 1898
XbaI TCTAGA 1 cut(s) 2216
XceI RCATGY 2 cut(s) 1180, 2266
XhoI CTCGAG 1 cut(s) 899
XmiI GTMKAC 2 cut(s) 941, 2529
XmnI GAANNNNTTC 2 cut(s) 1471, 2688
XspI CTAG 3 cut(s) 836, 906, 2217
Zsp2I ATGCAT 1 cut(s) 2050
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.