Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0013012

Physical Location & Seq

Genomic Coordinates Reverse (-)

33805564 .. 33818663

Gene Structure 13100 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g43760.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 7509 bp

ATGGGCGATGGAGGAGTCGCATGCATGCCTTTGCAGCATAATATCATGGACAGGTTTCCAATTCCGGAGAAGACTGCACTTTGCGGAGGCAATACTAATGCGAATGCGAATACAACTACTAGTACTACTGCTACTACTGATAAGAATAACAATGGCTTCAGTTCCAAGCCGGTTGTCAAGAAGAAGGTGATGAAGATCAAGAAGAGGATTGTCAAGAGGCCCAAGGTGAAAGTTGGCAACAGTAATGTGGAGGCGGCGGTGAAAAGTGAGGTGGGATCGGTGAAAGGTGAGAAGAGTGATGCTAAGGAAGCAGGGAACAGTTGTGGTGTTAAGGAAGTCGAGAAGAGTGGCGGTGCGAAAGAAGCTGAGAGGAGCGGTGTAAAGGAAGCTGAGAATGGTGGCGGCGATAAGGAAGCGGAGACCTGTGGTGTTCGGGAAGTTGAGAACGTGGAAAATGGGGAGGATAAGAAGGAGGAAGTGGAAGAGGGTGAGTTGGGTACTTTGAACGGTGAGTTTGTGCCGGAGAAGTGGAGGAGGAGTGAGATTGAGAGGGAGGAGACTGGGGATGAGAAATGGAGGAGAAGTGAGGTGGGGAAGGGGGAGTCTTTTTCCGGGAAATGGCGTAGAGGTGATGCAGAGAAGGCAGATATATATCCGGAGAAGAGTAGAAACAGTGAAGCTGAATTCGGCTCGTGGAGGCCACCCAAGGACGAAATTGAAAGAGGTGAGTACATTCCAGATAGATGGCAAAAGGGAGAGCTGGCCAGAGATGACTACATTAGCCGGAAAATTCCCACCAGGTATGATATGGGTGGTGGGAGGGGCAGGGGAAGGGGCTGGAAATTTGAGTCCTCTTCTGGTAAGTATCCGAGTGATGACGGTTTTAGAAGGAAAGAATATGGTAGAGGTGGTGGTCAGCACAGCAAGAGTACTTTCAGGTGGGATAGTGGTCAGGAGAGGAATACGAGGATCAGTTCTAAAATTGTTGATGATGAGGGTGTCTACAAGAATGAGTATGGCAATGAGTACAGCAACAGTAAGTATCAAGCAAAGGAGTTTTCTTCTGTTAATCGGTTGAAGAGGTACGGTCCTGATTCTAATAGTAATGAGCGGAAGCACTATGGAGATTATGGGGATTACGCCGCAGGTATAAAAAGTCGCAAGCTTTCTGATGAAAGTAATCGCTCTGCTCACTCCGAACATTATTCACAGCGTTCTGTGGAGAGATCTTATCGAAATCCTTCTTTCAGAGTAGCACCTGACAAGTACTCTTCTAGGCATTATGAACCTTCTTTGTCTTCCAGAGTGGTCTATGAAAGACATGGGCGAAGTCCAGGTCTCTCTGAGCGGTCCCCACGTGACAGGTCCCGGTATTATGATCACCTGGACCGGAGTCCAGTTCGCCGTGAGAGATCTCCATATGATCAAGAGAGGTCCCCTTTTGGCCGTGAAAAATCACCACATGGCCGTGAAAAATCACCATATTTTCGTGAGAGATCTCCATATGTTCGTGAGAGATCTCCATATGTTCGTGACAAATCCCCGTATGTTCGTGACAAATCCCCGTATGTTCGGGACAAATCTCCATATGCTCGCGACAAATCACCACATGGACGTGAAAGATCTCCATATGGTCGTGACAGATCTCCATATGTTCTGGAGAAATCTCCCTATGAAAGGAACCGTAATTTTGATCACAGAAACCGCAGTCTGTCTCCACAAGAACGACCTAGGTACCATGATCGCAGGGATCACACCCCAAACTATTTGGAGCGGTCACCACGTGACCGGGGTAGAGCTACTAGTAATAGAGGTACAGGACGGAAAAGTGGAGCAAGTGATAGGCGCAACTCCCAACATAAAGTGCATGAAGACAAGCCGGTGCAGAAGGTTCCCAGTGGAACGGACTCGAATTCCTCTGCCAAAGAATGTCAGGATAAAAGCAGTGTTCTTGATATTAATGTATCTGTGGAGACAATTGCCAACTCTGAGTCTCAAAAAGATGAACTGTCTCAAAGTTCAAATATAAATTGCAAGGAAACTTCTCATATTAGTGCAGCACCTCCTGAAGAGCTGCCTTCTATGGAAGAAGATATGGATATATGCGACACACCACCACATGTCCCAGTGATTGCTGATTCATCCACAGGGAAATGGTTTTACCTTGATTATTATGGTGTGGAATGTGGGCCTTCCAAATTGTCTGAGCTTAAAGCACTTGTTGAAGAAGGGGCGCTGATGTCTGATCACATGGTTAAGCACTCAGATAGTGATAGGTGGTTAACTGTTGAAAATGCAGTTTCGCCATTGATTACTGTGAATTTTCCATCCATTGTATCAGACTCGATAACTGGACTAGTAAGCCCTCCAGAAGCTCCTGGCAATCTATTGGCAGATACTGGACATACTGGGCACTTCGGTATTCAGAGTGGGAGTTTCCCGGGGTTGTGTGCAGATTTTGCTTCTGAGCCTCTAGAAGATTTGCACATTGAAGAAAGAGTTGGAGCTCTGATGGAGGGTTTAACAGTTATTCCTGGCAGGGAACTTGAAGCTGTTGGAGAAGTTTTGCAAATGTCATTTGAATGTGCTCAACGGGAAGTATGGGGAAACACCGAAGGTCTCTCTCAAGGTCATATTGGTGAACAGAATGATCAGAAAACTGAGGAACCACGATATTCTGACATTAAAATGAAAGATGCAGCAGAAGTAGGATTGACTGTACCCTCTGACAAAGATGCTTTAGCTTGTGGTGATTCTGGTGACTGGTTTTCTGGTCGATGGTCATGCAAGGGTGGTGATTGGATAAGGAACGAGGAAGGTGTGCAAGATAGGTCTTCTAGAAAGAAACTTGTTGTCAACAATGGTTTCCCATTATGCCAGATGTCAAAGGCTGGGTATGAAGACCCTCGATGGCATAGAAAAGATGAACTTTATTATCCTTCACAGAACAGAAGGCTTGATCTACCTACTTGGGCTTTTTCATGTCCAGATGATGCTAATAGAGTCTCTCAAAGTAAGCCTACTGTCATAAAAGGAGTAAAAGGAACGATCCTTCCGGTAGTCAAGATAAATGCATGCGTTGTAAAAGACCACGGTTCATTTGTTTCTGAGCCGCGGATAAAAGTTCGAGGAATAGAAAGGCATCCTTCGAGGTCTGCTCGGTCATATTCTGCAAGTAGTGATGGGAAGAGATCATCTGGCGAAGGTGATTCTCAAATGAAACCAGTAGGTGACCGAGGATCAAAGGGATCTTCCAAATGCATTTCATCCATTAAAACCCCCAAAGACCGTATTGGAACAGTTGATGACTTGCAATTGCATTTGGGAGACTGGTACTACCTTGATGGTGCTGGGCATGAACGAGGACCTTCATCATTCTCTGAGCTACAGGCCTTAGTTGATCAAGGAGTGATCCTGAAACATAGCAGTGTGTTTCGGAAATTTGATAAAGTCTGGGTTCCAGTTACCTCTGCCATCGAGACTTCTAATGCTAGCAAAAAGAATAAGGAGGAGAAGAACAGAACATCAAGTAATTCTTCAGGGCAATCCCAAAGTGCTGCATCTGCAGAATCAAGAACAAATTTGAGTTGGTTGCAGAACCTGCACCCTCAGTTCATTGGTTATACATGTGGAAAGCTTCATGAATTGGTGATGAAATCTTATAAAAGTCGGGAGTTTGCTGCAGCCATAAATGAGGTTTTAGACCCGTGGATTAATGCAAGGCAGCCAAAGAAAGAGTTGGACAAGCACATGTACTGGAAAGCAGATGGTGATGCACGTACTTCTAAAAGGGCTCGGTTGCTGGTTGATGAATGTGAAGAAGACTATGACGCAGAAGAGGATTTGCAAAGAATAGAAAAGGATGAATCCACATTTGAGGATCTCATTGGTAATGCTTCTTTCGTCAGAGAAGACGGCTTGAGTTATGGTTCAGAGATGGCAAGCTGGGGTTTATTGGATGGGCATGTGCTGGCACGGGTCTTTCATTTTTTAAGATTAGACATGAAATCTCTTACCATTGCTTCTCTGACTTGTAAGCACTGGAGAGCTGCGGTCAGTTTTTATAAGGATATTTCAAGACAGGTTGACTTGTCATCCTTGGGTCCGAAGTGCACCGACTCCATGATTGTGAACATTATGAGTGGTTATGGCAAAGAGAAGATTAATTCTATGGTTCTAATTGGCTGTACAAACATCACTCCCCACACTCTTGAAGAGATTCTTGGTTCACTTCCTTGTCTATCTAACATAGACATTAGGGGTTGCAACCAGTTTGGGGAGTTGGTCATTAAATTCCAGAACCTGAACTGGATTAAGAGCCGAAGCTCACGTGGTACAAAGATGCATGATGATTCCGATTCAAAATTGAAGAGTCTGAAATATATCACTGAAAAATCTTCTTATGTTTCTAGAAGTAAGGTTCTGGGTAATGATATGGATGATTTTAGTGAAATGAAAGTGTACCTTGATAGTGTGGATAAGAGAGACTCAGCTAATCATTCATTCCGGGGAAGTTTATACAAACGTTCAAAACTATTTGATGCTAGACGGTCCTCATCCATTCTATCTAGGAATGCTCGTATGAGGCGGTTGTCCATTAAGAAATCAGAAAATGGTTATAAGAGGATGGAGGAATTTGTTGCGTCAAGTCTGAAGGACATCATGAAGGAGAATACCTCTGATTTCTTTGTACCCAAGGTTGCTGAAATTCAAGATAAAATGAGAAATGGGTATTACATTCGCCGAGGATTGAGTTCTGTAAAGGATGACATCAGTCGAATGTGCAGGGATGCAATTAAAGCAAAGAATCGTGGTGAAGCTGGAGACATGAATCACATTATTAATTTATTTATACAACTTGCCTCACGTTTGGAAGGGGCTTCTAAATCCTCTGATGCAAGGGATGAGCTGATCAAGTCATGGGAAGATGATACACTTGCAGGGGTTTCTTCTGCCTCCAAGAGTAAAAAGAAGCTCAATAAGACATCTGAAAGGAAGTTGAGGAGTAATGGTTCCTTTGTGAATGGTAGTGTGGATAATGGAGAATATGCATCTGATCAAGAAATCAGAAGGCGTTTATCCAAGTTGAATAAAAAATCTATGGATTCAGAAAGTGAAACCTCTGATGATATTGACAGGTCATCTGAAGATGACAAGAGCAATAGTGAGAGTACTGCCTCGGATACAGAAAGTGACTTGGAATCTGGGTTACAAAGTCAACCTGGGCAATCAACAGCAGATGGATGCTTAGATCATGATGAGGGTTTAGATTCTCTGACTGATGATCGTGAGTGGGGTGCTCGCATGACCAAATCAAGTTTGGTTCCTCCTGTTACAAGAAAATATGAAGTCATTCATGAATATGTTATTGTATCAAATGAAGAGGATGTAAAGCGGAAGATGCAGGTGTCTTTGCCAAAGGACTATGTTGAGAAGCTTGCTTCACAGAAGAATGGAACTGACGAGTCTGATATGGATATTCCTGAAGTCAAGGACTACAAGCCCAGGAAAATGCTTGGAGATGAGGTTCTAGAGCAAGAGGTTTATGGAATTGATCCCTATAGCCATAATCTTTTGCTTGATTCCATGCCTGAGGAGTTCGATTGGCCTCTTCTGGAGAAGCATTTGTTTATAGAAGATGTGCTTCTTCGCACCCTGAATAAGCAAGTTAGACACTTCACTGGGACTGGAAATACTCCCATGATCTATCCTTTGCGGCCAGTTGTCGAAGATATTCGGATAACTGCTGAAGAGGATGGTGATATTCGAACTGTGAGAATGTGCCAGGGTATTTTGAAGGCCATAGACGGTCGCCCTGATGACAAGTATGTTGCTTATAGAAAGGGGCTTGGTGTCGTTTGCAACAAAGAAGAAGGTTTTGGAGAAGAAGATTTTGTTGTGGAATTCTTGGGGGAGGTGTATCCTGTTTGGAAATGGTTTGAGAAGCAAGATGGGATTCGATCTCTGCAGAAAAATAGTAAAGATCCAGCTCCGGAATTTTACAACATTTATCTTGAAAGGCCCAAGGGTGATGCTGATGGGTATGATTTAGTTGTTGTTGATGCCATGCATAAAGCAAACTATGCAAGTAGAATTTGTCACTCGTGCCGACCTAATTGTGAAGCAAAAGTTACTGCTGTAGATGGTCGTTACCAGATTGGGATCTACACTGTACGTAAAATTCAATATGGTGAAGAGATCACATTTGACTACAACTCTGTTACGGAGAGTAAGGAAGAATATGAAGCATCAGTTTGTTTGTGTGGTAGTCAAGTTTGCCGGGGAAGTTACCTGAATTTGACTGGCGAAGAAGCATTCCTGCAGGTGCTGAAGGATTGGCATGGAATTGTGGATCGTCATCATCTAATGCTGGAAGCTTGCGAGTTAAATTCAGTATCTGAGAAGGATTATTTTGACCTGGAAATGGCTGGTTTAGGCAAATGTTTGCTTGAGGGGTTGCCAGATTGGGCTATTGCATATACAGCTCGTTTGGTGAGGTTCATAAACTTTGAAAGAACAAAGCTTCCTGAAGTAATTTTGAAGCACAACTTGGAAGAAAAGAGGAAGTATTTCTCAGATATAGATCTTGAGGTTGAGAAGAGTGACGCGAGAATTCAGGCTGAGGGCGTGTTCAACCAAAGGCTTCAGAATTTGGCTGTTACTCTTGACAAGGTGAGGTATGTTATGAGCTCTGTATTTGGCGACCCAAAGAATGCTCCACCTCCACTGGAGAGGTTAACTCCAGAAGAAGCTGTTACATTTCTATGGAAGGGAGAAGGATCGCTTGTTGAGGAACTCCTTCAGAGTATGGCTCCTCATGTGGAGGAGCAATTGTTAAATGATCTCAAGTCCAAGATGCTTGCTCATGATCCATCGGGGTCTGATGACATTTGGAAAGAACTTAAGAGATCGCTACTATGGTTGAGAGATGAGGTCCGGAATCTTCCATGTACATACAGGTCTCGGCATGATGCTGCTGCTGATTTGATCCATATTTATGCATACACGAGGTGCTACATTAGAATACGGGAATACAAACCAGTAACTTCGCCGCCGGTATACATTAGTCCACTTGATTTGGGCCCCAAGTACACTAACAGATCAGGGGCAGATTTTCAGGAGTATTGCAAGACATATGGGGAGAATTATTGTTTAGGGCAGCTAATGTTTTGGTATAATCAGTCTAATGCGGAGCCAGATTGTAGTATGGCTAGAGCAAGTAGGGGTTGCTTATCTTTACCGGAGATCGGTTCCTTCTATGCCAAGATTTCAAAACCGTCAAGGCAGCGTGTTTATGGTCCAAAGGCTGTCAAATTTATGCTTTCAAGGATGGAGAAGCTGCCTCAAAAAGCTTGGCCCAAGGATCGAATATGGTCATTTAATAGCAAACCGAAAGTTCTTGGCAGTCCTATGCTAGACGCTGTTGTGAATGACTCTATCTTGGACAAAGAAATGGTGCACTGGTTAAAGCACAGACCTGCAATATATCAAGCTGTGTGGGATCGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0006325 GO:0006464 GO:0006479 GO:0006807 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008168 GO:0008170 GO:0008213 GO:0008276 GO:0008757 GO:0009791 GO:0009908 GO:0009987 GO:0010228 GO:0016043 GO:0016278 GO:0016279 GO:0016569 GO:0016570 GO:0016571 GO:0016740 GO:0016741 GO:0018022 GO:0018024 GO:0018193 GO:0018205 GO:0019538 GO:0022414 GO:0032259 GO:0032501 GO:0032502 GO:0034968 GO:0036211 GO:0042054 GO:0042800 GO:0043170 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048443 GO:0048466 GO:0048467 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0051276 GO:0051568 GO:0061458 GO:0071704 GO:0071840 GO:0090567 GO:0099402 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SET

Protein Analysis

2503

Amino Acids

283.31

Weight (kDa)

6.65

Isoelectric Point (pI)

53.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GYF_ATXR3	PF25531	717 - 764	2.6e-28	Histone-lysine N-methyltransferase ATXR3, GYF domain
GYF_ATXR3	PF25531	1109 - 1140	8e-08	Histone-lysine N-methyltransferase ATXR3, GYF domain
SET	PF00856	1790 - 2072	1.1e-12	SET domain
SDG2_C	PF19633	2083 - 2502	7.9e-231	Protein SET DOMAIN GROUP 2 C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0013012)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G15180
fragaria_vesca	FvH4_6g43760
malus_domestica	MD09G1103200.v1.1 MD17G1091000.v1.1
prunus_persica	Prupe.3G222600_v2.0.a1
pyrus_communis	pycom09g02660 pycom17g08780
rosa_chinensis	RchiOBHm_Chr2g0160501
rosa_laevigata	RLG00000021218
rosa_multiflora	Rmu_sc0000674.1_g000001
rosa_roxburghii	Rroxscaffold_2G00089780
rosa_rugosa	Rorug02G0483400 Rorug02G0483400
rosa_samantha	Rh2AG548700 Rh2BG562400 Rh2CG533000 Rh2DG571100
rosa_wichuraiana	Rw2G045430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	3663, 4065, 4620
AarI	CACCTGC	2 cut(s)	5395, 6313
Acc36I	ACCTGC	5 cut(s)	1136, 3609, 5395, 6313, 7486
Acc65I	GGTACC	1 cut(s)	1734
AccB1I	GGYRCC	1 cut(s)	1734
AccBSI	CCGCTC	4 cut(s)	375, 1111, 1348, 1774
AccI	GTMKAC	2 cut(s)	1002, 7059
AccII	CGCG	3 cut(s)	1596, 3115, 6608
AccIII	TCCGGA	4 cut(s)	64, 655, 5992, 6936
AclI	AACGTT	1 cut(s)	4525
AcoI	YGGCCR	4 cut(s)	762, 1444, 1465, 5717
AcvI	CACGTG	3 cut(s)	1358, 1784, 4331
AdeI	CACNNNGTG	2 cut(s)	1784, 7011
AfiI	CCNNNNNNNGG	5 cut(s)	618, 1677, 4276, 6424, 7247
AflII	CTTAAG	1 cut(s)	6902
AflIII	ACRYGT	3 cut(s)	2119, 3626, 3750
AhlI	ACTAGT	3 cut(s)	119, 1802, 2356
AjiI	CACGTC	1 cut(s)	1616
AjnI	CCWGG	9 cut(s)	797, 1333, 1383, 2377, 2533, 5221, 5504, 5784, 6417
AjuI	GAANNNNNNNTTGG	8 cut(s)	2484, 2516, 4206, 4238, 5862, 5894, 6533, 6565
AloI	GAACNNNNNNTCC	8 cut(s)	3037, 3069, 4996, 5028, 5511, 5543, 6508, 6540
Alw21I	GWGCWC	6 cut(s)	2509, 2590, 4115, 5302, 6692, 7461
Alw44I	GTGCAC	2 cut(s)	4111, 7457
AlwNI	CAGNNNCTG	5 cut(s)	2399, 3601, 4303, 6328, 6398
Ama87I	CYCGRG	1 cut(s)	2440
Aor13HI	TCCGGA	4 cut(s)	64, 655, 5992, 6936
ApaI	GGGCCC	1 cut(s)	7085
ApaLI	GTGCAC	2 cut(s)	4111, 7457
ArsI	GACNNNNNNTTYG	2 cut(s)	1321, 1353
AseI	ATTAAT	4 cut(s)	1959, 3714, 4164, 4842
Asp700I	GAANNNNTTC	6 cut(s)	1240, 4218, 5352, 5733, 6569, 6798
Asp718I	GGTACC	1 cut(s)	1734
AspA2I	CCTAGG	1 cut(s)	1730
AspLEI	GCGC	2 cut(s)	1848, 2236
AsuC2I	CCSGG	7 cut(s)	613, 1369, 1790, 2441, 2442, 4508, 6281
AsuII	TTCGAA	1 cut(s)	5767
AsuNHI	GCTAGC	1 cut(s)	3491
AvaI	CYCGRG	1 cut(s)	2440
AvrII	CCTAGG	1 cut(s)	1730
AxyI	CCTNAGG	1 cut(s)	5592
BaeGI	GKGCMC	4 cut(s)	2415, 4115, 7085, 7461
BaeI	ACNNNNGTAYC	2 cut(s)	1718, 1751
BalI	TGGCCA	1 cut(s)	764
BanI	GGYRCC	1 cut(s)	1734
BanII	GRGCYC	4 cut(s)	2509, 3796, 6692, 7085
BauI	CACGAG	3 cut(s)	691, 6103, 7006
BbrPI	CACGTG	3 cut(s)	1358, 1784, 4331
BbsI	GAAGAC	7 cut(s)	77, 1290, 1878, 2826, 2907, 3828, 3918
Bbv12I	GWGCWC	6 cut(s)	2509, 2590, 4115, 5302, 6692, 7461
BbvCI	CCTCAGC	1 cut(s)	6621
BceAI	ACGGC	4 cut(s)	1389, 1431, 1452, 3931
BcgI	CGANNNNNNTGC	2 cut(s)	2766, 2800
BciT130I	CCWGG	9 cut(s)	799, 1335, 1385, 2379, 2535, 5223, 5506, 5786, 6419
BciVI	GTATCC	3 cut(s)	876, 5176, 5931
BclI	TGATCA	8 cut(s)	1378, 1423, 1693, 2245, 2650, 3400, 4911, 5056
BcnI	CCSGG	7 cut(s)	613, 1369, 1790, 2441, 2442, 4508, 6281
BcuI	ACTAGT	3 cut(s)	119, 1802, 2356
BfmI	CTRYAG	7 cut(s)	3386, 3564, 3681, 5560, 5966, 6138, 6320
BfoI	RGCGCY	1 cut(s)	2237
BfrI	CTTAAG	1 cut(s)	6902
BfuAI	ACCTGC	5 cut(s)	1136, 3609, 5395, 6313, 7486
BfuI	GTATCC	3 cut(s)	876, 5176, 5931
BglII	AGATCT	7 cut(s)	1226, 1412, 1496, 1517, 1622, 1643, 6583
BlnI	CCTAGG	1 cut(s)	1730
BmcAI	AGTACT	4 cut(s)	124, 931, 1268, 5173
BmeT110I	CYCGRG	1 cut(s)	2440
BmgBI	CACGTC	1 cut(s)	1616
BmrI	ACTGGG	5 cut(s)	570, 1890, 2120, 2418, 5691
BmtI	GCTAGC	1 cut(s)	3495
BmuI	ACTGGG	5 cut(s)	570, 1890, 2120, 2418, 5691
BoxI	GACNNNNGTC	2 cut(s)	1392, 4773
BpiI	GAAGAC	7 cut(s)	77, 1290, 1878, 2826, 2907, 3828, 3918
BplI	GAGNNNNNCTC	8 cut(s)	3142, 3174, 4661, 4693, 6724, 6756, 6796, 6828
BpmI	CTGGAG	7 cut(s)	1679, 2352, 4063, 4842, 5636, 6726, 6749
Bpu10I	CCTNAGC	2 cut(s)	303, 6621
Bpu14I	TTCGAA	1 cut(s)	5767
BpuEI	CTTGAG	5 cut(s)	2610, 3940, 6470, 6608, 6830
BpuMI	CCSGG	7 cut(s)	613, 1369, 1790, 2441, 2442, 4508, 6281
BsaAI	YACGTR	5 cut(s)	1358, 1784, 3779, 4331, 6176
BsaBI	GATNNNNATC	5 cut(s)	194, 651, 6161, 6357, 6582
BsaI	GGTCTC	4 cut(s)	413, 1343, 2624, 6966
BsaWI	WCCGGW	7 cut(s)	64, 655, 1389, 3055, 5992, 6936, 7240
Bsc4I	CCNNNNNNNGG	5 cut(s)	618, 1677, 4276, 6424, 7247
Bse118I	RCCGGY	3 cut(s)	169, 1879, 7054
Bse21I	CCTNAGG	1 cut(s)	5592
Bse3DI	GCAATG	2 cut(s)	1027, 4017
Bse8I	GATNNNNATC	5 cut(s)	194, 651, 6161, 6357, 6582
BseAI	TCCGGA	4 cut(s)	64, 655, 5992, 6936
BseBI	CCWGG	9 cut(s)	799, 1335, 1385, 2379, 2535, 5223, 5506, 5786, 6419
BseJI	GATNNNNATC	5 cut(s)	194, 651, 6161, 6357, 6582
BseLI	CCNNNNNNNGG	5 cut(s)	618, 1677, 4276, 6424, 7247
BseMI	GCAATG	2 cut(s)	1027, 4017
BseSI	GKGCMC	4 cut(s)	2415, 4115, 7085, 7461
BseYI	CCCAGC	3 cut(s)	2891, 3350, 3945
BsgI	GTGCAG	6 cut(s)	60, 1904, 2076, 2472, 3587, 4804
Bsh1236I	CGCG	3 cut(s)	1596, 3115, 6608
Bsh1285I	CGRYCG	1 cut(s)	5812
BshNI	GGYRCC	1 cut(s)	1734
BsiEI	CGRYCG	1 cut(s)	5812
BsiHKAI	GWGCWC	6 cut(s)	2509, 2590, 4115, 5302, 6692, 7461
BsiHKCI	CYCGRG	1 cut(s)	2440
BslFI	GGGAC	6 cut(s)	1336, 1351, 1420, 1589, 2108, 5698
BslI	CCNNNNNNNGG	5 cut(s)	618, 1677, 4276, 6424, 7247
BsmFI	GGGAC	6 cut(s)	1336, 1351, 1420, 1589, 2108, 5698
BsmI	GAATGC	4 cut(s)	109, 4579, 6314, 6718
Bso31I	GGTCTC	4 cut(s)	413, 1343, 2624, 6966
BsoBI	CYCGRG	1 cut(s)	2440
Bsp119I	TTCGAA	1 cut(s)	5767
Bsp120I	GGGCCC	1 cut(s)	7081
Bsp1286I	GDGCHC	9 cut(s)	2415, 2509, 2590, 3796, 4115, 5302, 6692, 7085, 7461
Bsp13I	TCCGGA	4 cut(s)	64, 655, 5992, 6936
Bsp1407I	TGTACA	2 cut(s)	4187, 6950
Bsp68I	TCGCGA	1 cut(s)	1596
BspEI	TCCGGA	4 cut(s)	64, 655, 5992, 6936
BspFNI	CGCG	3 cut(s)	1596, 3115, 6608
BspHI	TCATGA	5 cut(s)	3640, 4662, 5254, 5356, 6865
BspMAI	CTGCAG	4 cut(s)	3568, 3685, 5970, 6324
BspMI	ACCTGC	5 cut(s)	1136, 3609, 5395, 6313, 7486
BspOI	GCTAGC	1 cut(s)	3495
BspQI	GCTCTTC	1 cut(s)	2064
BspT104I	TTCGAA	1 cut(s)	5767
BspT107I	GGYRCC	1 cut(s)	1734
BspTI	CTTAAG	1 cut(s)	6902
BspTNI	GGTCTC	4 cut(s)	413, 1343, 2624, 6966
BsrBI	CCGCTC	4 cut(s)	375, 1111, 1348, 1774
BsrDI	GCAATG	2 cut(s)	1027, 4017
BsrFI	RCCGGY	3 cut(s)	169, 1879, 7054
BsrGI	TGTACA	2 cut(s)	4187, 6950
BssAI	RCCGGY	3 cut(s)	169, 1879, 7054
BssNAI	GTATAC	1 cut(s)	7060
BssSI	CACGAG	3 cut(s)	691, 6103, 7006
BssT1I	CCWWGG	7 cut(s)	222, 705, 1730, 4098, 4695, 6024, 7359
Bst1107I	GTATAC	1 cut(s)	7060
Bst2BI	CACGAG	3 cut(s)	691, 6103, 7006
Bst2UI	CCWGG	9 cut(s)	799, 1335, 1385, 2379, 2535, 5223, 5506, 5786, 6419
BstAFI	CTTAAG	1 cut(s)	6902
BstAPI	GCANNNNNTGC	3 cut(s)	2459, 3601, 6083
BstAUI	TGTACA	2 cut(s)	4187, 6950
BstBAI	YACGTR	5 cut(s)	1358, 1784, 3779, 4331, 6176
BstBI	TTCGAA	1 cut(s)	5767
BstDSI	CCRYGG	3 cut(s)	3091, 3113, 3707
BstEII	GGTNACC	2 cut(s)	1776, 3230
BstENI	CCTNNNNNAGG	1 cut(s)	1675
BstFNI	CGCG	3 cut(s)	1596, 3115, 6608
BstH2I	RGCGCY	1 cut(s)	2237
BstHHI	GCGC	2 cut(s)	1848, 2236
BstMCI	CGRYCG	1 cut(s)	5812
BstNI	CCWGG	9 cut(s)	799, 1335, 1385, 2379, 2535, 5223, 5506, 5786, 6419
BstNSI	RCATGY	7 cut(s)	24, 28, 2123, 3078, 3630, 3754, 3968
BstPAI	GACNNNNGTC	2 cut(s)	1392, 4773
BstPI	GGTNACC	2 cut(s)	1776, 3230
BstSFI	CTRYAG	7 cut(s)	3386, 3564, 3681, 5560, 5966, 6138, 6320
BstSLI	GKGCMC	4 cut(s)	2415, 4115, 7085, 7461
BstSNI	TACGTA	1 cut(s)	6176
BstUI	CGCG	3 cut(s)	1596, 3115, 6608
BstV2I	GAAGAC	7 cut(s)	77, 1290, 1878, 2826, 2907, 3828, 3918
BstXI	CCANNNNNNTGG	1 cut(s)	744
BstZ17I	GTATAC	1 cut(s)	7060
Bsu36I	CCTNAGG	1 cut(s)	5592
BsuI	GTATCC	3 cut(s)	876, 5176, 5931
BtgI	CCRYGG	3 cut(s)	3091, 3113, 3707
BtgZI	GCGATG	1 cut(s)	21
BtrI	CACGTC	1 cut(s)	1616
BtsI	GCAGTG	2 cut(s)	1951, 3433
BtuMI	TCGCGA	1 cut(s)	1596
BveI	ACCTGC	5 cut(s)	1136, 3609, 5395, 6313, 7486
CaiI	CAGNNNCTG	5 cut(s)	2399, 3601, 4303, 6328, 6398
CciI	TCATGA	5 cut(s)	3640, 4662, 5254, 5356, 6865
CfoI	GCGC	2 cut(s)	1848, 2236
Cfr10I	RCCGGY	3 cut(s)	169, 1879, 7054
Cfr42I	CCGCGG	1 cut(s)	3116
Cfr9I	CCCGGG	1 cut(s)	2440
CseI	GACGC	4 cut(s)	3839, 4632, 6614, 7427
CsiI	ACCWGGT	1 cut(s)	797
CspCI	CAANNNNNGTGG	3 cut(s)	7059, 7094, 7478
DraIII	CACNNNGTG	2 cut(s)	1784, 7011
EaeI	YGGCCR	4 cut(s)	762, 1444, 1465, 5717
Ecl136II	GAGCTC	2 cut(s)	2507, 6690
Eco105I	TACGTA	1 cut(s)	6176
Eco130I	CCWWGG	7 cut(s)	222, 705, 1730, 4098, 4695, 6024, 7359
Eco147I	AGGCCT	1 cut(s)	3392
Eco24I	GRGCYC	4 cut(s)	2509, 3796, 6692, 7085
Eco31I	GGTCTC	4 cut(s)	413, 1343, 2624, 6966
Eco53kI	GAGCTC	2 cut(s)	2507, 6690
Eco72I	CACGTG	3 cut(s)	1358, 1784, 4331
Eco81I	CCTNAGG	1 cut(s)	5592
Eco88I	CYCGRG	1 cut(s)	2440
Eco91I	GGTNACC	2 cut(s)	1776, 3230
EcoICRI	GAGCTC	2 cut(s)	2507, 6690
EcoNI	CCTNNNNNAGG	1 cut(s)	1675
EcoO109I	RGGNCCY	4 cut(s)	1365, 1434, 3365, 7082
EcoO65I	GGTNACC	2 cut(s)	1776, 3230
EcoRI	GAATTC	4 cut(s)	683, 1912, 5903, 6612
EcoRII	CCWGG	9 cut(s)	797, 1333, 1383, 2377, 2533, 5221, 5504, 5784, 6417
EcoT14I	CCWWGG	7 cut(s)	222, 705, 1730, 4098, 4695, 6024, 7359
EcoT22I	ATGCAT	7 cut(s)	26, 3076, 3263, 4347, 5053, 6072, 7003
EcoT38I	GRGCYC	4 cut(s)	2509, 3796, 6692, 7085
ErhI	CCWWGG	7 cut(s)	222, 705, 1730, 4098, 4695, 6024, 7359
FaqI	GGGAC	6 cut(s)	1336, 1351, 1420, 1589, 2108, 5698
FauNDI	CATATG	7 cut(s)	1420, 1504, 1525, 1588, 1630, 1651, 7135
FbaI	TGATCA	8 cut(s)	1378, 1423, 1693, 2245, 2650, 3400, 4911, 5056
FblI	GTMKAC	2 cut(s)	1002, 7059
FriOI	GRGCYC	4 cut(s)	2509, 3796, 6692, 7085
GlaI	GCGC	2 cut(s)	1847, 2235
GsaI	CCCAGC	3 cut(s)	2895, 3354, 3949
GsuI	CTGGAG	7 cut(s)	1679, 2352, 4063, 4842, 5636, 6726, 6749
HaeII	RGCGCY	1 cut(s)	2237
HgaI	GACGC	4 cut(s)	3839, 4632, 6614, 7427
HhaI	GCGC	2 cut(s)	1848, 2236
Hin6I	GCGC	2 cut(s)	1846, 2234
HinP1I	GCGC	2 cut(s)	1846, 2234
HincII	GTYRAC	5 cut(s)	2283, 2857, 4087, 5219, 6738
HindII	GTYRAC	5 cut(s)	2283, 2857, 4087, 5219, 6738
HindIII	AAGCTT	6 cut(s)	1163, 3635, 5435, 6375, 6521, 7350
HpaI	GTTAAC	2 cut(s)	2283, 6738
HpyCH4IV	ACGT	9 cut(s)	447, 1357, 1615, 1783, 3778, 4330, 4525, 4867, 6175
HpySE526I	ACGT	9 cut(s)	447, 1357, 1615, 1783, 3778, 4330, 4525, 4867, 6175
HspAI	GCGC	2 cut(s)	1846, 2234
Kpn2I	TCCGGA	4 cut(s)	64, 655, 5992, 6936
KpnI	GGTACC	1 cut(s)	1738
Ksp22I	TGATCA	8 cut(s)	1378, 1423, 1693, 2245, 2650, 3400, 4911, 5056
KspAI	GTTAAC	2 cut(s)	2283, 6738
KspI	CCGCGG	1 cut(s)	3116
LguI	GCTCTTC	1 cut(s)	2064
MabI	ACCWGGT	1 cut(s)	797
MaeII	ACGT	9 cut(s)	447, 1357, 1615, 1783, 3778, 4330, 4525, 4867, 6175
MbiI	CCGCTC	4 cut(s)	375, 1111, 1348, 1774
MfeI	CAATTG	3 cut(s)	1977, 3314, 6830
MhlI	GDGCHC	9 cut(s)	2415, 2509, 2590, 3796, 4115, 5302, 6692, 7085, 7461
MlsI	TGGCCA	1 cut(s)	764
MluNI	TGGCCA	1 cut(s)	764
MmeI	TCCRAC	3 cut(s)	2482, 2536, 3720
Mox20I	TGGCCA	1 cut(s)	764
Mph1103I	ATGCAT	7 cut(s)	26, 3076, 3263, 4347, 5053, 6072, 7003
MroI	TCCGGA	4 cut(s)	64, 655, 5992, 6936
MroXI	GAANNNNTTC	6 cut(s)	1240, 4218, 5352, 5733, 6569, 6798
MscI	TGGCCA	1 cut(s)	764
Msp20I	TGGCCA	1 cut(s)	764
MspA1I	CMGCKG	1 cut(s)	3115
MspCI	CTTAAG	1 cut(s)	6902
MunI	CAATTG	3 cut(s)	1977, 3314, 6830
Mva1269I	GAATGC	4 cut(s)	109, 4579, 6314, 6718
MvaI	CCWGG	9 cut(s)	799, 1335, 1385, 2379, 2535, 5223, 5506, 5786, 6419
MvnI	CGCG	3 cut(s)	1596, 3115, 6608
NciI	CCSGG	7 cut(s)	613, 1369, 1790, 2441, 2442, 4508, 6281
NdeI	CATATG	7 cut(s)	1420, 1504, 1525, 1588, 1630, 1651, 7135
NheI	GCTAGC	1 cut(s)	3491
NmeAIII	GCCGAG	2 cut(s)	4769, 6943
NruI	TCGCGA	1 cut(s)	1596
NsiI	ATGCAT	7 cut(s)	26, 3076, 3263, 4347, 5053, 6072, 7003
NspI	RCATGY	7 cut(s)	24, 28, 2123, 3078, 3630, 3754, 3968
NspV	TTCGAA	1 cut(s)	5767
PaeI	GCATGC	3 cut(s)	24, 28, 3078
PagI	TCATGA	5 cut(s)	3640, 4662, 5254, 5356, 6865
PaqCI	CACCTGC	2 cut(s)	5395, 6313
PceI	AGGCCT	1 cut(s)	3392
PciI	ACATGT	3 cut(s)	2119, 3626, 3750
PciSI	GCTCTTC	1 cut(s)	2064
PctI	GAATGC	4 cut(s)	109, 4579, 6314, 6718
PdmI	GAANNNNTTC	6 cut(s)	1240, 4218, 5352, 5733, 6569, 6798
PfoI	TCCNGGA	1 cut(s)	611
PmaCI	CACGTG	3 cut(s)	1358, 1784, 4331
PmlI	CACGTG	3 cut(s)	1358, 1784, 4331
Ppu21I	YACGTR	5 cut(s)	1358, 1784, 3779, 4331, 6176
PpuMI	RGGWCCY	3 cut(s)	1365, 1434, 3365
PscI	ACATGT	3 cut(s)	2119, 3626, 3750
PshAI	GACNNNNGTC	2 cut(s)	1392, 4773
PshBI	ATTAAT	4 cut(s)	1959, 3714, 4164, 4842
PsiI	TTATAA	3 cut(s)	3663, 4065, 4620
Psp124BI	GAGCTC	2 cut(s)	2509, 6692
Psp1406I	AACGTT	1 cut(s)	4525
Psp5II	RGGWCCY	3 cut(s)	1365, 1434, 3365
Psp6I	CCWGG	9 cut(s)	797, 1333, 1383, 2377, 2533, 5221, 5504, 5784, 6417
PspCI	CACGTG	3 cut(s)	1358, 1784, 4331
PspEI	GGTNACC	2 cut(s)	1776, 3230
PspFI	CCCAGC	3 cut(s)	2891, 3350, 3945
PspGI	CCWGG	9 cut(s)	797, 1333, 1383, 2377, 2533, 5221, 5504, 5784, 6417
PspOMI	GGGCCC	1 cut(s)	7081
PspPPI	RGGWCCY	3 cut(s)	1365, 1434, 3365
PstI	CTGCAG	4 cut(s)	3568, 3685, 5970, 6324
PstNI	CAGNNNCTG	5 cut(s)	2399, 3601, 4303, 6328, 6398
RruI	TCGCGA	1 cut(s)	1596
SacI	GAGCTC	2 cut(s)	2509, 6692
SacII	CCGCGG	1 cut(s)	3116
SapI	GCTCTTC	1 cut(s)	2064
SbfI	CCTGCAGG	1 cut(s)	6324
ScaI	AGTACT	4 cut(s)	124, 931, 1268, 5173
SdaI	CCTGCAGG	1 cut(s)	6324
SduI	GDGCHC	9 cut(s)	2415, 2509, 2590, 3796, 4115, 5302, 6692, 7085, 7461
SexAI	ACCWGGT	1 cut(s)	797
SfcI	CTRYAG	7 cut(s)	3386, 3564, 3681, 5560, 5966, 6138, 6320
Sfr303I	CCGCGG	1 cut(s)	3116
SfuI	TTCGAA	1 cut(s)	5767
SgrBI	CCGCGG	1 cut(s)	3116
SmaI	CCCGGG	1 cut(s)	2442
SmlI	CTYRAG	6 cut(s)	2625, 3919, 6449, 6587, 6845, 6902
SmoI	CTYRAG	6 cut(s)	2625, 3919, 6449, 6587, 6845, 6902
SnaBI	TACGTA	1 cut(s)	6176
SpeI	ACTAGT	3 cut(s)	119, 1802, 2356
SphI	GCATGC	3 cut(s)	24, 28, 3078
Sse8387I	CCTGCAGG	1 cut(s)	6324
SseBI	AGGCCT	1 cut(s)	3392
SstI	GAGCTC	2 cut(s)	2509, 6692
StuI	AGGCCT	1 cut(s)	3392
StyI	CCWWGG	7 cut(s)	222, 705, 1730, 4098, 4695, 6024, 7359
TaiI	ACGT	9 cut(s)	450, 1360, 1618, 1786, 3781, 4333, 4528, 4870, 6178
TaqII	GACCGA	2 cut(s)	3150, 3249
TauI	GCSGC	6 cut(s)	257, 405, 1145, 3115, 5719, 7054
TspGWI	ACGGA	3 cut(s)	1837, 1919, 6239
TspMI	CCCGGG	1 cut(s)	2440
Vha464I	CTTAAG	1 cut(s)	6902
VneI	GTGCAC	2 cut(s)	4111, 7457
VspI	ATTAAT	4 cut(s)	1959, 3714, 4164, 4842
XagI	CCTNNNNNAGG	1 cut(s)	1675
XbaI	TCTAGA	4 cut(s)	2473, 2837, 4409, 5530
XceI	RCATGY	7 cut(s)	24, 28, 2123, 3078, 3630, 3754, 3968
XcmI	CCANNNNNNNNNTGG	2 cut(s)	805, 5317
XmaI	CCCGGG	1 cut(s)	2440
XmaJI	CCTAGG	1 cut(s)	1730
XmiI	GTMKAC	2 cut(s)	1002, 7059
XmnI	GAANNNNTTC	6 cut(s)	1240, 4218, 5352, 5733, 6569, 6798
ZrmI	AGTACT	4 cut(s)	124, 931, 1268, 5173
Zsp2I	ATGCAT	7 cut(s)	26, 3076, 3263, 4347, 5053, 6072, 7003

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.